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ONTOLOGY REPORT - ANNOTATIONS

Term:ribonucleoside diphosphate catabolic process
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Accession:GO:0009191 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: ribonucleoside diphosphate breakdown;   ribonucleoside diphosphate catabolism;   ribonucleoside diphosphate degradation


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ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cant1 calcium activated nucleotidase 1 acts_upstream_of_or_within IC (PMID:12167635) MGI PMID:12167635 NCBI chr11:118,297,115...118,309,971
Ensembl chr11:118,297,115...118,309,912 		JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 acts_upstream_of_or_within ISO (PMID:11278936) MGI PMID:11278936 NCBI chr19:43,678,128...43,722,292
Ensembl chr19:43,678,111...43,722,136 		JBrowse link
G Nudt5 nudix hydrolase 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:5,849,839...5,875,631
Ensembl chr 2:5,849,830...5,876,706 		JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in IMP (PMID:28746349) MGI PMID:28746349 NCBI chr 7:110,367,291...110,411,612
Ensembl chr 7:110,367,413...110,411,612 		JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in IMP (PMID:17502665) MGI PMID:17502665 NCBI chr19:40,600,810...40,730,046
Ensembl chr19:40,600,810...40,730,046 		JBrowse link
G Nt5e 5' nucleotidase, ecto involved_in IMP (PMID:28746349)
(PMID:20430891)		 MGI PMID:20430891 PMID:28746349 NCBI chr 9:88,209,662...88,254,142
Ensembl chr 9:88,209,250...88,254,145 		JBrowse link
G Nudt9 nudix hydrolase 9 acts_upstream_of_or_within IDA (PMID:11825615) MGI PMID:11825615 NCBI chr 5:104,193,407...104,213,244
Ensembl chr 5:104,194,172...104,213,245 		JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase A, fructose-bisphosphate involved_in IDA (PMID:28049690) MGI PMID:28049690 NCBI chr 7:126,394,406...126,399,537
Ensembl chr 7:126,394,406...126,399,923 		JBrowse link
G Eno1 enolase 1, alpha non-neuron involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:150,321,165...150,333,336
Ensembl chr 4:150,321,178...150,333,336 		JBrowse link
G Eno1b enolase 1B, retrotransposed involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:48,178,402...48,181,446
Ensembl chr18:48,178,402...48,181,479 		JBrowse link
G Eno2 enolase 2, gamma neuronal involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:124,737,018...124,746,489
Ensembl chr 6:124,737,016...124,746,636 		JBrowse link
G Eno3 enolase 3, beta muscle involved_in IGI (PMID:27760309) MGI PMID:27760309 NCBI chr11:70,543,973...70,553,339
Ensembl chr11:70,548,028...70,553,339 		JBrowse link
G Foxk1 forkhead box K1 acts_upstream_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:142,387,252...142,447,770
Ensembl chr 5:142,387,252...142,447,766 		JBrowse link
G Foxk2 forkhead box K2 acts_upstream_of IDA (MGI:6281052|PMID:30700909) UniProt PMID:30700909 MGI:6281052 NCBI chr11:121,150,805...121,200,726
Ensembl chr11:121,150,816...121,200,722 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in IMP
IDA		 (PMID:10777777), (PMID:28918937)
(PMID:12581789)		 MGI PMID:10777777 PMID:12581789 PMID:28918937 NCBI chr 6:125,138,812...125,143,450
Ensembl chr 6:125,138,678...125,143,430 		JBrowse link
G Gpi1 glucose-6-phosphate isomerase 1 involved_in TAS (PMID:27103217) MGI PMID:27103217 NCBI chr 7:33,900,752...33,929,761
Ensembl chr 7:33,900,755...33,929,761 		JBrowse link
G Hk1 hexokinase 1 involved_in IDA (PMID:4275392) MGI PMID:4275392 NCBI chr10:62,104,634...62,215,699
Ensembl chr10:62,104,634...62,215,687 		JBrowse link
G Pfkl phosphofructokinase, liver, B-type involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:77,822,781...77,845,641
Ensembl chr10:77,822,781...77,845,917 		JBrowse link
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within
involved_in		 IMP
IBA
IGI
IDA		 (PMID:19696889)
(PMID:27760309)
(PMID:28049690), (PMID:4275392)		 MGI
GO_Central		 PMID:4275392 PMID:19696889 PMID:27760309 PMID:28049690 GO_REF:0000033 NCBI chr15:97,990,470...98,030,328
Ensembl chr15:97,990,470...98,030,332 		JBrowse link
G Pfkp phosphofructokinase, platelet involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:6,629,910...6,699,096
Ensembl chr13:6,629,804...6,698,813 		JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:12189148) UniProt PMID:12189148 NCBI chr19:41,900,310...41,907,104
Ensembl chr19:41,900,362...41,907,099 		JBrowse link
G Pgam2 phosphoglycerate mutase 2 involved_in IDA (PMID:23951293) MGI PMID:23951293 NCBI chr11:5,751,637...5,753,796
Ensembl chr11:5,751,640...5,753,733 		JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in IGI (PMID:30174313) MGI PMID:30174313 NCBI chr  X:105,230,706...105,247,305
Ensembl chr  X:105,230,706...105,247,305 		JBrowse link
G Pkm pyruvate kinase, muscle involved_in IDA (PMID:28630053) MGI PMID:28630053 NCBI chr 9:59,563,859...59,586,655
Ensembl chr 9:59,563,651...59,586,658 		JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IGI (PMID:30174313) MGI PMID:30174313 NCBI chr 6:124,787,549...124,791,121
Ensembl chr 6:124,787,549...124,791,259 		JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:69,574,600...69,604,191
Ensembl chr14:69,574,623...69,604,719 		JBrowse link
G Entpd4b ectonucleoside triphosphate diphosphohydrolase 4B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:69,792,850...69,822,389
Ensembl chr14:69,792,873...69,822,969 		JBrowse link
G Nudt18 nudix hydrolase 18 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:70,815,264...70,820,128
Ensembl chr14:70,815,077...70,820,128 		JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within IMP (PMID:19696889) MGI PMID:19696889 NCBI chr15:97,990,470...98,030,328
Ensembl chr15:97,990,470...98,030,332 		JBrowse link
glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adpgk ADP-dependent glucokinase acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 9:59,198,855...59,223,483
Ensembl chr 9:59,198,841...59,231,335 		JBrowse link
G Aldoa aldolase A, fructose-bisphosphate involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:126,394,406...126,399,537
Ensembl chr 7:126,394,406...126,399,923 		JBrowse link
G Aldoart1 aldolase 1 A, retrogene 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:72,768,820...72,770,871
Ensembl chr 4:72,768,820...72,770,871 		JBrowse link
G Aldoart2 aldolase 1 A, retrogene 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:55,611,990...55,613,681
Ensembl chr12:55,612,024...55,613,681 		JBrowse link
G Aldob aldolase B, fructose-bisphosphate involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:49,535,993...49,549,546
Ensembl chr 4:49,535,995...49,549,546 		JBrowse link
G Aldoc aldolase C, fructose-bisphosphate involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:78,213,899...78,218,607
Ensembl chr11:78,213,794...78,218,607 		JBrowse link
G Bpgm 2,3-bisphosphoglycerate mutase involved_in IMP (PMID:32966787) MGI PMID:32966787 NCBI chr 6:34,453,291...34,482,071
Ensembl chr 6:34,453,142...34,482,548 		JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IMP (PMID:23437220) MGI PMID:23437220 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002 		JBrowse link
G Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 2:5,901,030...5,947,648
Ensembl chr 2:5,900,926...5,947,603 		JBrowse link
G Eno1 enolase 1, alpha non-neuron involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:150,321,165...150,333,336
Ensembl chr 4:150,321,178...150,333,336 		JBrowse link
G Eno1b enolase 1B, retrotransposed acts_upstream_of_or_within ISS (PMID:23446454) MGI PMID:23446454 NCBI chr18:48,178,402...48,181,446
Ensembl chr18:48,178,402...48,181,479 		JBrowse link
G Eno2 enolase 2, gamma neuronal involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:124,737,018...124,746,489
Ensembl chr 6:124,737,016...124,746,636 		JBrowse link
G Eno3 enolase 3, beta muscle involved_in ISS
IBA		 (MGI:5882875|PMID:22087329) CAFA
GO_Central		 PMID:22087329 GO_REF:0000033 MGI:5882875 NCBI chr11:70,543,973...70,553,339
Ensembl chr11:70,548,028...70,553,339 		JBrowse link
G Eno4 enolase 4 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:23446454) MGI
GO_Central		 PMID:23446454 GO_REF:0000033 NCBI chr19:58,922,490...58,959,853
Ensembl chr19:58,931,857...58,959,853 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:29259245) MGI PMID:29259245 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within IDA (PMID:31296900) MGI PMID:31296900 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO
IBA		 MGI
GO_Central
RGD		 PMID:28258188 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:13792662 NCBI chr 6:125,138,812...125,143,450
Ensembl chr 6:125,138,678...125,143,430 		JBrowse link
G Gapdhrt glyceraldehyde-3-phosphate dehydrogenase, retrotransposed involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr14:11,187,822...11,189,022
Ensembl chr14:11,113,047...11,189,038 		JBrowse link
G Gapdhrt2 glyceraldehyde-3-phosphate dehydrogenase, retrotransposed 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr 8:76,131,965...76,133,165
Ensembl chr 8:76,131,968...76,133,217 		JBrowse link
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:15546993), (PMID:19759366) GO_Central
MGI		 PMID:15546993 PMID:19759366 GO_REF:0000033 NCBI chr 7:30,429,204...30,443,106
Ensembl chr 7:30,429,200...30,443,106 		JBrowse link
G Gck glucokinase involved_in ISO
IBA		 RGD
GO_Central
MGI		 PMID:4273555 PMID:4353083 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2302790 RGD:2302851 NCBI chr11:5,850,816...5,900,081
Ensembl chr11:5,850,820...5,900,081 		JBrowse link
G Gpi1 glucose-6-phosphate isomerase 1 involved_in
acts_upstream_of_or_within		 IBA
IDA
IMP		 (PMID:15665293)
(PMID:8417789)		 GO_Central
MGI		 PMID:8417789 PMID:15665293 GO_REF:0000033 NCBI chr 7:33,900,752...33,929,761
Ensembl chr 7:33,900,755...33,929,761 		JBrowse link
G Hk1 hexokinase 1 involved_in
acts_upstream_of_or_within		 ISO
TAS
IBA		 (PMID:12420306) MGI
GO_Central
RGD		 PMID:4353083 PMID:12420306 PMID:15574336 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1358232 RGD:2302851 NCBI chr10:62,104,634...62,215,699
Ensembl chr10:62,104,634...62,215,687 		JBrowse link
G Hk2 hexokinase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:82,702,004...82,751,437
Ensembl chr 6:82,702,006...82,751,435 		JBrowse link
G Hk3 hexokinase 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:55,153,798...55,169,233
Ensembl chr13:55,153,798...55,169,198 		JBrowse link
G Hkdc1 hexokinase domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:62,218,916...62,259,490
Ensembl chr10:62,218,916...62,258,270 		JBrowse link
G Htr2a 5-hydroxytryptamine (serotonin) receptor 2A acts_upstream_of IMP (PMID:17408640) MGI PMID:17408640 NCBI chr14:74,878,314...74,944,299
Ensembl chr14:74,878,280...74,946,934 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of IMP (PMID:19096392) MGI PMID:19096392 NCBI chr17:36,132,605...36,133,803
Ensembl chr17:36,132,576...36,133,815 		JBrowse link
G Lipa lysosomal acid lipase A acts_upstream_of_or_within IMP (PMID:25807535) MGI PMID:25807535 NCBI chr19:34,469,716...34,504,874
Ensembl chr19:34,469,718...34,504,874 		JBrowse link
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr11:6,241,597...6,309,094
Ensembl chr11:6,241,633...6,306,642 		JBrowse link
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:130,616,780...130,656,990
Ensembl chr 1:130,616,919...130,656,990
Ensembl chr 1:130,616,919...130,656,990 		JBrowse link
G Pfkl phosphofructokinase, liver, B-type involved_in ISO RGD
MGI		 PMID:2931076 PMID:4273555 PMID:4353083 PMID:6458283 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:2301239 RGD:2302736 RGD:2302790 RGD:2302851 NCBI chr10:77,822,781...77,845,641
Ensembl chr10:77,822,781...77,845,917 		JBrowse link
G Pfkm phosphofructokinase, muscle involved_in ISO RGD
MGI		 PMID:2931076 PMID:8593533 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1599363 RGD:2302736 NCBI chr15:97,990,470...98,030,328
Ensembl chr15:97,990,470...98,030,332 		JBrowse link
G Pfkp phosphofructokinase, platelet involved_in ISO MGI
RGD		 PMID:2931076 GO_REF:0000096 MGI:4417868 RGD:2302736 NCBI chr13:6,629,910...6,699,096
Ensembl chr13:6,629,804...6,698,813 		JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in
acts_upstream_of_or_within		 IEA UniProt GO_REF:0000002 GO_REF:0000043 MGI:1354194 MGI:2152098 NCBI chr19:41,900,310...41,907,104
Ensembl chr19:41,900,362...41,907,099 		JBrowse link
G Pgam2 phosphoglycerate mutase 2 involved_in
acts_upstream_of_or_within		 ISO
IDA		 (PMID:15665293) MGI PMID:15665293 GO_REF:0000119 MGI:4834177 NCBI chr11:5,751,637...5,753,796
Ensembl chr11:5,751,640...5,753,733 		JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IDA		 (PMID:15665293) RGD
GO_Central
MGI		 PMID:3091090 PMID:6405813 PMID:15665293 GO_REF:0000033 GO_REF:0000119 MGI:4834177 RGD:2302859 RGD:2302860 NCBI chr  X:105,230,706...105,247,305
Ensembl chr  X:105,230,706...105,247,305 		JBrowse link
G Pgk2 phosphoglycerate kinase 2 acts_upstream_of_or_within
involved_in		 IC
IMP
IBA		 (PMID:2823118)
(PMID:19759366)		 MGI
GO_Central		 PMID:2823118 PMID:19759366 GO_REF:0000033 NCBI chr17:40,517,909...40,519,500
Ensembl chr17:40,517,906...40,519,531 		JBrowse link
G Pklr pyruvate kinase liver and red blood cell involved_in ISO
IBA
IDA
NAS		 (PMID:7295297)
(MGI:7511665|PMID:23270483)		 RGD
GO_Central
MGI
ComplexPortal		 PMID:4273555 PMID:4353083 PMID:7295297 PMID:23270483 GO_REF:0000033 GO_REF:0000096 MGI:4417868 MGI:7511665 RGD:2302790 RGD:2302851 NCBI chr 3:89,043,429...89,054,122
Ensembl chr 3:89,043,449...89,054,091 		JBrowse link
G Pkm pyruvate kinase, muscle involved_in
acts_upstream_of_or_within		 ISO
IDA
IBA		 (PMID:7262549)
(PMID:7262549), (PMID:7295297)		 MGI
GO_Central
RGD		 PMID:4273555 PMID:7262549 PMID:7295297 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:2302790 NCBI chr 9:59,563,859...59,586,655
Ensembl chr 9:59,563,651...59,586,658 		JBrowse link
G Tigar Trp53 induced glycolysis regulatory phosphatase acts_upstream_of IDA (PMID:20935145) MGI PMID:20935145 NCBI chr 6:127,062,079...127,086,564
Ensembl chr 6:127,062,079...127,086,520 		JBrowse link
G Tpi1 triosephosphate isomerase 1 acts_upstream_of_or_within
involved_in		 IC
IBA		 (PMID:15155459) MGI
GO_Central		 PMID:15155459 GO_REF:0000033 NCBI chr 6:124,787,549...124,791,121
Ensembl chr 6:124,787,549...124,791,259 		JBrowse link
G Ucp2 uncoupling protein 2 (mitochondrial, proton carrier) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:100,142,565...100,148,832
Ensembl chr 7:100,142,544...100,151,227 		JBrowse link
glycolytic process from galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale galactose-4-epimerase, UDP acts_upstream_of_or_within IC (PMID:14741191) MGI PMID:14741191 NCBI chr 4:135,690,550...135,695,489
Ensembl chr 4:135,691,038...135,695,489 		JBrowse link
G Galk1 galactokinase 1 acts_upstream_of_or_within IMP
IC		 (PMID:10915771)
(PMID:14741191)		 MGI PMID:10915771 PMID:14741191 NCBI chr11:115,899,183...115,903,545
Ensembl chr11:115,899,283...115,903,545 		JBrowse link
G Galt galactose-1-phosphate uridyl transferase acts_upstream_of_or_within IC
IMP		 (PMID:14741191)
(PMID:11286504)		 MGI PMID:11286504 PMID:14741191 NCBI chr 4:41,755,517...41,759,243
Ensembl chr 4:41,755,228...41,758,695 		JBrowse link
glycolytic process from mannose through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpi mannose phosphate isomerase acts_upstream_of_or_within IC (PMID:16339137) MGI PMID:16339137 NCBI chr 9:57,448,744...57,460,095
Ensembl chr 9:57,451,539...57,460,046 		JBrowse link
glycolytic process through fructose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldob aldolase B, fructose-bisphosphate acts_upstream_of_or_within IC (PMID:25637246) MGI PMID:25637246 NCBI chr 4:49,535,993...49,549,546
Ensembl chr 4:49,535,995...49,549,546 		JBrowse link
G Khk ketohexokinase acts_upstream_of_or_within IC (PMID:15652177)
(PMID:20841500)		 MGI PMID:15652177 PMID:20841500 NCBI chr 5:31,078,780...31,088,592
Ensembl chr 5:31,078,775...31,088,592 		JBrowse link
G Tkfc triokinase, FMN cyclase acts_upstream_of_or_within IC (PMID:15652177) MGI PMID:15652177 NCBI chr19:10,565,153...10,583,257
Ensembl chr19:10,565,155...10,583,018 		JBrowse link
glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase A, fructose-bisphosphate acts_upstream_of_or_within IC (PMID:11785984) MGI PMID:11785984 NCBI chr 7:126,394,406...126,399,537
Ensembl chr 7:126,394,406...126,399,923 		JBrowse link
G Aldob aldolase B, fructose-bisphosphate acts_upstream_of_or_within IC (PMID:25637246) MGI PMID:25637246 NCBI chr 4:49,535,993...49,549,546
Ensembl chr 4:49,535,995...49,549,546 		JBrowse link
G Pfkl phosphofructokinase, liver, B-type involved_in
acts_upstream_of_or_within		 IMP
IDA		 (PMID:35530161)
(PMID:8172601), (PMID:9287040)		 MGI PMID:8172601 PMID:9287040 PMID:35530161 NCBI chr10:77,822,781...77,845,641
Ensembl chr10:77,822,781...77,845,917 		JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within		 ISO
IDA
IMP
IC		 (PMID:2521854)
(PMID:17595219)
(PMID:19889946)		 MGI PMID:2521854 PMID:17595219 PMID:19889946 GO_REF:0000119 MGI:4834177 NCBI chr15:97,990,470...98,030,328
Ensembl chr15:97,990,470...98,030,332 		JBrowse link
G Pfkp phosphofructokinase, platelet acts_upstream_of_or_within ISS (PMID:10814514) MGI PMID:10814514 NCBI chr13:6,629,910...6,699,096
Ensembl chr13:6,629,804...6,698,813 		JBrowse link
glycolytic process through glucose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpi1 glucose-6-phosphate isomerase 1 acts_upstream_of_or_within IC (PMID:1235912), (PMID:7277315) MGI PMID:1235912 PMID:7277315 NCBI chr 7:33,900,752...33,929,761
Ensembl chr 7:33,900,755...33,929,761 		JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IMP (MGI:3759354|PMID:17828264) UniProt PMID:17828264 MGI:3759354 NCBI chr19:4,911,244...4,927,937
Ensembl chr19:4,911,244...4,927,937 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 translocation partner 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:123,351,875...123,426,069
Ensembl chr 8:123,351,880...123,425,848 		JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 acts_upstream_of_or_within IMP (PMID:20176937) MGI PMID:20176937 NCBI chr10:59,785,497...59,787,592
Ensembl chr10:59,785,491...59,787,656 		JBrowse link
G Fbp1 fructose bisphosphatase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:63,012,567...63,036,112
Ensembl chr13:63,012,567...63,036,096 		JBrowse link
G Flcn folliculin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:59,682,234...59,706,138
Ensembl chr11:59,682,234...59,700,842 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in IMP (MGI:6478067|PMID:32460388) UniProt PMID:32460388 MGI:6478067 NCBI chr11:77,384,114...77,398,600
Ensembl chr11:77,384,388...77,398,612 		JBrowse link
G Hdac4 histone deacetylase 4 involved_in IMP (MGI:4365327|PMID:19109424) BHF-UCL PMID:19109424 MGI:4365327 NCBI chr 1:91,856,501...92,123,424
Ensembl chr 1:91,856,501...92,123,421 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within IMP (PMID:19096392) MGI PMID:19096392 NCBI chr17:36,132,605...36,133,803
Ensembl chr17:36,132,576...36,133,815 		JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within IMP (PMID:26219591) MGI PMID:26219591 NCBI chr 2:90,677,434...90,697,154
Ensembl chr 2:90,677,499...90,697,154 		JBrowse link
G Myog myogenin involved_in ISO RGD
MGI		 PMID:10225962 GO_REF:0000096 MGI:4417868 RGD:9686132 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:62,207,132...62,348,200
Ensembl chr11:62,207,252...62,349,367 		JBrowse link
G Nupr1 nuclear protein transcription regulator 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:126,222,418...126,224,642
Ensembl chr 7:126,222,421...126,230,033 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:85,619,112...85,691,052
Ensembl chr15:85,619,184...85,687,020 		JBrowse link
G Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha involved_in ISO RGD
MGI		 PMID:22343369 GO_REF:0000096 MGI:4417868 RGD:7242186 NCBI chr 5:51,611,591...52,273,316
Ensembl chr 5:51,611,592...51,725,068 		JBrowse link
G Sik2 salt inducible kinase 2 involved_in IMP (PMID:21084751) MGI PMID:21084751 NCBI chr 9:50,800,944...50,920,432
Ensembl chr 9:50,804,101...50,920,373 		JBrowse link
G Sirt6 sirtuin 6 involved_in IMP
ISO		 (MGI:4881401|PMID:20141841), (MGI:5619441|PMID:23217706) CACAO
MGI		 PMID:20141841 PMID:23217706 GO_REF:0000119 MGI:4834177 MGI:4881401 MGI:5619441 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 acts_upstream_of_or_within IMP (PMID:22891351) MGI PMID:22891351 NCBI chr11:100,777,632...100,830,447
Ensembl chr11:100,775,924...100,830,366 		JBrowse link
G Tigar Trp53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:20935145) MGI
GO_Central		 PMID:20935145 GO_REF:0000033 NCBI chr 6:127,062,079...127,086,564
Ensembl chr 6:127,062,079...127,086,520 		JBrowse link
G Trim63 tripartite motif-containing 63 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:134,042,431...134,056,940
Ensembl chr 4:134,042,431...134,056,940 		JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in IMP
IGI		 (PMID:15331593)
(PMID:16155866)		 MGI PMID:15331593 PMID:16155866 NCBI chr  X:149,370,441...149,426,874
Ensembl chr  X:149,371,225...149,426,874 		JBrowse link
G Ppp2ca protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform involved_in IMP (PMID:32192773) MGI PMID:32192773 NCBI chr11:51,989,651...52,013,576
Ensembl chr11:51,989,508...52,018,605 		JBrowse link
G Prkaca protein kinase, cAMP dependent, catalytic, alpha involved_in IMP
IDA		 (PMID:16155866)
(PMID:23292513)		 MGI PMID:16155866 PMID:23292513 NCBI chr 8:84,699,607...84,723,073
Ensembl chr 8:84,699,622...84,723,072 		JBrowse link
G Slc4a1 solute carrier family 4 (anion exchanger), member 1 acts_upstream_of_or_within IMP (PMID:18698006) MGI PMID:18698006 NCBI chr11:102,239,646...102,256,107
Ensembl chr11:102,239,650...102,257,029 		JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654 		JBrowse link
G Esrrb estrogen related receptor, beta involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402 		JBrowse link
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic involved_in TAS (MGI:3513747|PMID:15546993) UniProt PMID:15546993 MGI:3513747 NCBI chr 7:30,429,204...30,443,106
Ensembl chr 7:30,429,200...30,443,106 		JBrowse link
G Gck glucokinase involved_in ISO RGD
MGI		 PMID:17553851 GO_REF:0000096 MGI:4417868 RGD:2301905 NCBI chr11:5,850,816...5,900,081
Ensembl chr11:5,850,820...5,900,081 		JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 (soluble) acts_upstream_of_or_within IMP (PMID:11147825) MGI PMID:11147825 NCBI chr15:99,615,468...99,622,895
Ensembl chr15:99,615,396...99,622,886 		JBrowse link
G Htr2a 5-hydroxytryptamine (serotonin) receptor 2A acts_upstream_of_or_within IMP (PMID:17408640) MGI PMID:17408640 NCBI chr14:74,878,314...74,944,299
Ensembl chr14:74,878,280...74,946,934 		JBrowse link
G Ifng interferon gamma involved_in IDA (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Ins1 insulin I involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:52,252,735...52,253,453
Ensembl chr19:52,252,735...52,253,914 		JBrowse link
G Ins2 insulin II involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118 		JBrowse link
G Insr insulin receptor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Kat2b K(lysine) acetyltransferase 2B involved_in IDA (PMID:21084751) MGI PMID:21084751 NCBI chr17:53,873,802...53,979,749
Ensembl chr17:53,873,889...53,979,748 		JBrowse link
G Mif macrophage migration inhibitory factor (glycosylation-inhibiting factor) ISO RGD PMID:11086030 RGD:1642010 NCBI chr10:75,695,187...75,696,111
Ensembl chr10:75,695,187...75,696,074 		JBrowse link
G Mlst8 MTOR associated protein, LST8 homolog (S. cerevisiae) involved_in NAS (MGI:4821507|PMID:20670887) ComplexPortal PMID:20670887 MGI:4821507 NCBI chr17:24,692,524...24,698,722
Ensembl chr17:24,692,525...24,698,052 		JBrowse link
G Mlx MAX-like protein X involved_in IDA (PMID:14742444) MGI PMID:14742444 NCBI chr11:100,978,116...100,983,033
Ensembl chr11:100,978,103...100,983,033 		JBrowse link
G Mlxipl MLX interacting protein-like involved_in IMP
IDA
ISO		 (MGI:3041761|PMID:15118080)
(PMID:14742444)		 BHF-UCL
MGI		 PMID:14742444 PMID:15118080 GO_REF:0000119 MGI:3041761 MGI:4834177 NCBI chr 5:135,118,744...135,168,622
Ensembl chr 5:135,118,744...135,167,236 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in NAS (MGI:4821507|PMID:20670887) ComplexPortal PMID:20670887 MGI:4821507 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Myc myelocytomatosis oncogene involved_in ISO RGD
MGI		 PMID:22842522 GO_REF:0000096 MGI:4417868 RGD:7207891 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223 		JBrowse link
G P2rx7 purinergic receptor P2X, ligand-gated ion channel, 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:122,781,990...122,830,399
Ensembl chr 5:122,781,974...122,829,495 		JBrowse link
G Prkaa1 protein kinase, AMP-activated, alpha 1 catalytic subunit involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:5,172,641...5,211,380
Ensembl chr15:5,173,343...5,211,380 		JBrowse link
G Prkaa2 protein kinase, AMP-activated, alpha 2 catalytic subunit involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:104,886,846...104,967,095
Ensembl chr 4:104,887,071...104,967,087 		JBrowse link
G Prxl2c peroxiredoxin like 2C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:64,437,612...64,460,524
Ensembl chr13:64,423,094...64,460,524 		JBrowse link
G Psen1 presenilin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 involved_in NAS (MGI:4821507|PMID:20670887) ComplexPortal PMID:20670887 MGI:4821507 NCBI chr11:119,493,731...119,790,417
Ensembl chr11:119,493,731...119,790,402 		JBrowse link
G Slc4a4 solute carrier family 4 (anion exchanger), member 4 acts_upstream_of IMP
ISO		 (MGI:5295108|PMID:21976511) ARUK-UCL
MGI		 PMID:21976511 GO_REF:0000119 MGI:4834177 MGI:5295108 NCBI chr 5:88,941,717...89,387,515
Ensembl chr 5:89,034,345...89,387,512 		JBrowse link
G Src Rous sarcoma oncogene involved_in IDA (PMID:35263589) UniProt PMID:35263589 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782 		JBrowse link
G Uchl1 ubiquitin carboxy-terminal hydrolase L1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:66,833,464...66,844,577
Ensembl chr 5:66,833,434...66,844,577 		JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in IMP (MGI:5913553|PMID:28327662) UniProt PMID:28327662 MGI:5913553 NCBI chr16:42,728,008...43,462,981
Ensembl chr16:42,696,244...43,462,965 		JBrowse link
positive regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in ISO (PMID:12230553) MGI PMID:12230553 NCBI chr  X:149,370,441...149,426,874
Ensembl chr  X:149,371,225...149,426,874 		JBrowse link
G Ppp2ca protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform involved_in ISO (PMID:7592845) MGI PMID:7592845 NCBI chr11:51,989,651...52,013,576
Ensembl chr11:51,989,508...52,018,605 		JBrowse link
purine ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 acts_upstream_of_or_within IDA (PMID:11929769) MGI PMID:11929769 NCBI chr19:40,600,810...40,730,046
Ensembl chr19:40,600,810...40,730,046 		JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 acts_upstream_of_or_within IDA (PMID:11929769) MGI PMID:11929769 NCBI chr 2:25,285,886...25,291,335
Ensembl chr 2:25,285,886...25,291,333 		JBrowse link
regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl2 ADP-ribosylation factor-like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:6,184,419...6,191,167
Ensembl chr19:6,184,404...6,191,578 		JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in IMP (MGI:5699484|PMID:26383020) UniProt PMID:26383020 MGI:5699484 NCBI chr 2:155,661,757...155,668,845
Ensembl chr 2:155,661,752...155,668,845 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:81,470,329...81,536,273
Ensembl chr15:81,469,552...81,536,278 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit involved_in
acts_upstream_of_or_within		 ISO
IGI		 (PMID:17437992) MGI PMID:17437992 GO_REF:0000119 MGI:4834177 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Il3 interleukin 3 acts_upstream_of_or_within IGI (PMID:17437992) MGI PMID:17437992 NCBI chr11:54,155,911...54,158,105
Ensembl chr11:54,156,129...54,158,103 		JBrowse link
G Jmjd8 jumonji domain containing 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:26,048,017...26,050,817
Ensembl chr17:26,047,841...26,050,817 		JBrowse link
G Mlxipl MLX interacting protein-like involved_in ISO RGD
MGI		 PMID:11724780 GO_REF:0000096 MGI:4417868 RGD:634534 NCBI chr 5:135,118,744...135,168,622
Ensembl chr 5:135,118,744...135,167,236 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:100,683,617...100,727,957
Ensembl chr  X:100,683,666...100,727,957 		JBrowse link
G Prkag2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:25,067,733...25,311,576
Ensembl chr 5:25,067,742...25,305,640 		JBrowse link
G Prkag3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit acts_upstream_of_or_within IMP (PMID:15857891) MGI PMID:15857891 NCBI chr 1:74,778,062...74,788,623
Ensembl chr 1:74,778,081...74,788,380 		JBrowse link
G Slc2a6 solute carrier family 2 (facilitated glucose transporter), member 6 involved_in IMP
ISO		 (MGI:6276413|PMID:30431159) UniProt
MGI		 PMID:30431159 GO_REF:0000119 MGI:4834177 MGI:6276413 NCBI chr 2:26,911,375...26,918,011
Ensembl chr 2:26,911,375...26,918,010 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IMP (PMID:28069950) MGI PMID:28069950 NCBI chr 9:108,887,000...108,888,791
Ensembl chr 9:108,887,001...108,888,802 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:80,971,113...80,988,056
Ensembl chr10:80,971,054...80,988,829 		JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:69,574,600...69,604,191
Ensembl chr14:69,574,623...69,604,719 		JBrowse link
G Entpd4b ectonucleoside triphosphate diphosphohydrolase 4B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:69,792,850...69,822,389
Ensembl chr14:69,792,873...69,822,969 		JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 involved_in IDA (MGI:1927266|PMID:10369669), (MGI:4881347|PMID:21074248) UniProt PMID:10369669 PMID:21074248 MGI:1927266 MGI:4881347 NCBI chr12:84,420,649...84,455,803
Ensembl chr12:84,420,631...84,455,803 		JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:43,678,128...43,722,292
Ensembl chr19:43,678,111...43,722,136 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    metabolic process 11001
      catabolic process 2737
        organic substance catabolic process 2280
          organophosphate catabolic process 254
            nucleoside phosphate catabolic process 191
              nucleoside diphosphate catabolic process 124
                ribonucleoside diphosphate catabolic process 121
                  purine ribonucleoside diphosphate catabolic process + 117
                  pyrimidine ribonucleoside diphosphate catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 28573
    metabolic process 11001
      organic substance metabolic process 10573
        organic cyclic compound metabolic process 5906
          nucleobase-containing compound metabolic process 5390
            nucleobase-containing small molecule metabolic process 667
              nucleoside phosphate metabolic process 608
                nucleoside diphosphate metabolic process 140
                  nucleoside diphosphate catabolic process 124
                    ribonucleoside diphosphate catabolic process 121
                      purine ribonucleoside diphosphate catabolic process + 117
                      pyrimidine ribonucleoside diphosphate catabolic process + 4
paths to the root