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ONTOLOGY REPORT - ANNOTATIONS

Term:cyclic nucleotide biosynthetic process
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Accession:GO:0009190 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.
Synonyms:exact_synonym: cyclic nucleotide anabolism;   cyclic nucleotide biosynthesis;   cyclic nucleotide formation;   cyclic nucleotide synthesis


show annotations for term's descendants           Sort by:
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:14985420 PMID:21873635 RGD:2312640, RGD:13792537 NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969 		JBrowse link
G Adcy10 adenylate cyclase 10 involved_in IDA
ISO
IMP		 (PMID:12609998), (PMID:15659711) RGD PMID:12609998 PMID:15659711 PMID:9874775 PMID:7225326 PMID:16627466 More... RGD:1299450, RGD:2313177, RGD:2313173, RGD:2313171 NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951 		JBrowse link
G Adcy2 adenylate cyclase 2 involved_in IDA
IBA
IEA		 PMID:21873635
GO_REF:0000117
PMID:18164588
PMID:10427002		 UniProt
RGD		 PMID:11738086 PMID:21873635 PMID:18164588 PMID:10427002 PMID:12711600 GO_REF:0000117, RGD:2312641, RGD:13792537, RGD:8553431, RGD:10400857, RGD:2312674 NCBI chr 1:34,375,639...34,822,252
Ensembl chr 1:34,375,895...34,822,236 		JBrowse link
G Adcy3 adenylate cyclase 3 involved_in IDA
IEA
ISO
IBA		 GO_REF:0000117
(MGI:1889935|PMID:11055432)
PMID:24363043
PMID:21873635		 UniProt
RGD		 PMID:11055432 PMID:12711600 PMID:24363043 PMID:21873635 GO_REF:0000117 MGI:1889935, RGD:2312674, RGD:10400870, RGD:13792537 NCBI chr 6:27,100,089...27,203,686
Ensembl chr 6:27,124,828...27,203,686 		JBrowse link
G Adcy4 adenylate cyclase 4 involved_in IDA
IBA
IEA		 PMID:8900209
PMID:21873635
GO_REF:0000117		 UniProt
RGD		 PMID:11738086 PMID:12711600 PMID:8900209 PMID:21873635 GO_REF:0000117, RGD:2312641, RGD:2312674, RGD:8554340, RGD:13792537 NCBI chr15:29,266,280...29,282,153
Ensembl chr15:29,266,287...29,282,108 		JBrowse link
G Adcy5 adenylate cyclase 5 involved_in IDA
IBA
IEA
ISO		 PMID:21873635
GO_REF:0000117
(PMID:15385642), (PMID:24700542), (PMID:24740569)		 UniProt
RGD		 PMID:15385642 PMID:24700542 PMID:24740569 PMID:11738086 PMID:21873635 More... GO_REF:0000117, RGD:2312641, RGD:13792537, RGD:2315006, RGD:2312674 NCBI chr11:65,471,612...65,618,877
Ensembl chr11:65,471,612...65,618,974 		JBrowse link
G Adcy6 adenylate cyclase 6 involved_in IDA
IMP
ISO
IEA
IBA		 (PMID:17916776), (PMID:18403039)
(MGI:4457984|PMID:20466003)
GO_REF:0000117
PMID:21873635		 RGD
UniProt		 PMID:17916776 PMID:18403039 PMID:20466003 PMID:15961389 PMID:11738086 More... GO_REF:0000117 MGI:4457984, RGD:1598749, RGD:2312641, RGD:2312654, RGD:2312678, RGD:2312674, RGD:2313211, RGD:2315006, RGD:13792537 NCBI chr 7:129,742,827...129,763,922
Ensembl chr 7:129,742,838...129,763,754 		JBrowse link
G Adcy7 adenylate cyclase 7 involved_in IDA
IBA
ISO		 PMID:21873635
(PMID:11113152), (PMID:17760784)		 RGD PMID:11113152 PMID:17760784 PMID:12711600 PMID:21873635 RGD:2312674, RGD:13792537 NCBI chr19:18,740,875...18,798,924
Ensembl chr19:18,740,875...18,776,311 		JBrowse link
G Adcy8 adenylate cyclase 8 involved_in IMP
IBA
IEA		 PMID:21873635
GO_REF:0000117		 UniProt
RGD		 PMID:16741924 PMID:19444869 PMID:19305019 PMID:21873635 GO_REF:0000117, RGD:2312769, RGD:2312785, RGD:7241269, RGD:13792537 NCBI chr 7:96,417,310...96,665,911
Ensembl chr 7:96,417,324...96,665,911 		JBrowse link
G Adcy9 adenylate cyclase 9 acts_upstream_of_or_within
involved_in		 IMP
ISO		 (MGI:76465|PMID:7575502), (MGI:80863|PMID:8662814)
(PMID:10987815), (PMID:9628827)		 RGD PMID:7575502 PMID:8662814 PMID:9628827 PMID:10987815 PMID:19444869 MGI:76465 MGI:80863, RGD:2312785 NCBI chr10:11,138,966...11,262,067
Ensembl chr10:11,139,446...11,262,066 		JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:23505436)
MGI:3640802 (MGI:3640061|PMID:16614755)
PMID:21873635
GO_REF:0000002		 RGD
InterPro		 PMID:16614755 PMID:23505436 PMID:21873635 GO_REF:0000002 MGI:3640061, RGD:13792537 NCBI chr 2:167,418,615...167,482,293
Ensembl chr 2:167,418,640...167,481,671 		JBrowse link
G Gucy1a2 guanylate cyclase 1 soluble subunit alpha 2 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 8:500,212...900,201
Ensembl chr 8:500,212...889,203 		JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 involved_in ISO
IBA		 (PMID:23505436)
PMID:21873635		 RGD PMID:23505436 PMID:21873635 RGD:13792537 NCBI chr 2:167,348,824...167,398,983
Ensembl chr 2:167,348,825...167,398,916 		JBrowse link
G Gucy1b2 guanylate cyclase 1 soluble subunit beta 2 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr15:36,589,501...36,669,441
Ensembl chr15:36,598,883...36,669,441 		JBrowse link
G Gucy2c guanylate cyclase 2C involved_in IEA
IBA		 GO_REF:0000043
PMID:21873635		 UniProt PMID:21873635 GO_REF:0000043, RGD:13792537 NCBI chr 4:169,568,505...169,649,092
Ensembl chr 4:169,568,529...169,649,092 		JBrowse link
G Gucy2d guanylate cyclase 2D, retinal involved_in IEA
ISO
IBA		 GO_REF:0000107
(MGI:5049799|PMID:21598940)
PMID:21873635		 Ensembl
RGD		 PMID:21598940 PMID:21873635 GO_REF:0000107 MGI:5049799, RGD:13792537 NCBI chr10:53,954,918...53,975,576
Ensembl chr10:53,959,010...53,974,067 		JBrowse link
G Gucy2e guanylate cyclase 2E involved_in IDA
IEA
IBA		 PMID:11580282
GO_REF:0000043
PMID:21873635		 UniProt PMID:11580282 PMID:21873635 GO_REF:0000043, RGD:15023466, RGD:13792537 NCBI chr 1:152,739,775...152,774,474
Ensembl chr 1:152,739,775...152,774,473 		JBrowse link
G Gucy2f guanylate cyclase 2F involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:105,710,356...105,808,183
Ensembl chr  X:105,710,356...105,808,183 		JBrowse link
G Gucy2g guanylate cyclase 2G involved_in IEA
IBA		 GO_REF:0000043
PMID:21873635		 UniProt PMID:21873635 GO_REF:0000043, RGD:13792537 NCBI chr 1:254,237,778...254,280,277
Ensembl chr 1:254,239,174...254,280,277 		JBrowse link
G Nppa natriuretic peptide A acts_upstream_of
involved_in		 ISO
IMP
IBA
IEA		 (PMID:1672777)
PMID:21873635
GO_REF:0000107		 RGD
Ensembl		 PMID:1672777 PMID:10559136 PMID:21873635 GO_REF:0000107, RGD:619660, RGD:13792537 NCBI chr 5:158,429,042...158,430,351
Ensembl chr 5:158,429,042...158,430,351 		JBrowse link
G Nppb natriuretic peptide B acts_upstream_of
involved_in		 ISO
IBA		 (PMID:1672777)
PMID:21873635		 RGD PMID:1672777 PMID:21873635 RGD:13792537 NCBI chr 5:158,416,813...158,418,175
Ensembl chr 5:158,416,866...158,418,168 		JBrowse link
G Nppc natriuretic peptide C involved_in
acts_upstream_of		 IBA
ISO		 PMID:21873635
(PMID:1672777)
(MGI:2177134|PMID:11259675)		 RGD PMID:1672777 PMID:11259675 PMID:21873635 MGI:2177134, RGD:13792537 NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251 		JBrowse link
G Npr1 natriuretic peptide receptor 1 involved_in ISO
IEA
IBA		 (PMID:1672777)
GO_REF:0000043
PMID:21873635		 RGD
UniProt		 PMID:1672777 PMID:21873635 GO_REF:0000043, RGD:13792537 NCBI chr 2:175,934,181...175,950,118
Ensembl chr 2:175,934,181...175,949,505 		JBrowse link
G Npr2 natriuretic peptide receptor 2 acts_upstream_of
involved_in		 ISO
IEA
IBA		 (PMID:1672777)
GO_REF:0000043
GO_REF:0000107
PMID:21873635		 RGD
UniProt
Ensembl		 PMID:1672777 PMID:21873635 GO_REF:0000043 GO_REF:0000107, RGD:13792537 NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    metabolic process 11538
      organic substance metabolic process 10895
        organophosphate metabolic process 1025
          nucleoside phosphate metabolic process 612
            nucleotide metabolic process 602
              nucleotide biosynthetic process 254
                cyclic nucleotide biosynthetic process 24
                  3',5'-cyclic diguanylic acid metabolic process 0
                  cAMP biosynthetic process 10
                  cGMP biosynthetic process 14
Path 2
Term Annotations click to browse term
  biological_process 19553
    metabolic process 11538
      cellular metabolic process 10124
        cellular aromatic compound metabolic process 5773
          nucleobase-containing compound metabolic process 5539
            nucleobase-containing small molecule metabolic process 684
              nucleoside phosphate metabolic process 612
                nucleotide metabolic process 602
                  nucleotide biosynthetic process 254
                    cyclic nucleotide biosynthetic process 24
                      3',5'-cyclic diguanylic acid metabolic process 0
                      cAMP biosynthetic process 10
                      cGMP biosynthetic process 14
paths to the root