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ONTOLOGY REPORT - ANNOTATIONS


Term:deoxyribonucleoside diphosphate metabolic process
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Accession:GO:0009186 term browser browse the term
Definition:The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: deoxyribonucleoside diphosphate metabolism



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dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:6,378,987...6,381,712
Ensembl chr14:6,377,815...6,381,596
JBrowse link
dADP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chr 1:75,558,009...75,693,415 JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chr 6:164,161,439...164,197,429
Ensembl chr 6:164,162,515...164,197,379
JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUK1 guanylate kinase 1 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:4307347 GO_REF:0000107 RGD:5147877 NCBI chr 2:51,247,665...51,257,481
Ensembl chr 2:51,241,952...51,257,485
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:6,378,987...6,381,712
Ensembl chr14:6,377,815...6,381,596
JBrowse link
dGDP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK9 adenylate kinase 9 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:75,558,009...75,693,415 JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK2 cytidine/uridine monophosphate kinase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:192455 PMID:21873635 RGD:5133256 NCBI chr 3:128,903,395...128,917,873
Ensembl chr 3:128,903,616...128,917,871
JBrowse link
G DTYMK deoxythymidylate kinase involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:21873635)
(MGI:77260|PMID:8845311)
Ensembl
InterPro
GO_Central
Ensembl
MGI
RGD
GO_Central
PMID:220041 PMID:8845311 PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:77260 RGD:5133687 NCBI chr15:140,248,071...140,255,803
Ensembl chr15:140,248,068...140,255,892
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chr 6:164,161,439...164,197,429
Ensembl chr 6:164,162,515...164,197,379
JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:192455 PMID:21873635 RGD:5133256 NCBI chr 3:128,903,395...128,917,873
Ensembl chr 3:128,903,616...128,917,871
JBrowse link
G DTYMK deoxythymidylate kinase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr15:140,248,071...140,255,803
Ensembl chr15:140,248,068...140,255,892
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16975
    metabolic process 10638
      organic substance metabolic process 10190
        organophosphate metabolic process 858
          nucleoside phosphate metabolic process 446
            nucleoside diphosphate metabolic process 123
              deoxyribonucleoside diphosphate metabolic process 6
                deoxyribonucleoside diphosphate biosynthetic process + 4
                deoxyribonucleoside diphosphate catabolic process + 1
                purine deoxyribonucleoside diphosphate metabolic process + 3
                pyrimidine deoxyribonucleoside diphosphate metabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 16975
    metabolic process 10638
      nitrogen compound metabolic process 8997
        cellular nitrogen compound metabolic process 5815
          nucleobase-containing compound metabolic process 5050
            nucleobase-containing small molecule metabolic process 509
              nucleoside phosphate metabolic process 446
                nucleoside diphosphate metabolic process 123
                  deoxyribonucleoside diphosphate metabolic process 6
                    deoxyribonucleoside diphosphate biosynthetic process + 4
                    deoxyribonucleoside diphosphate catabolic process + 1
                    purine deoxyribonucleoside diphosphate metabolic process + 3
                    pyrimidine deoxyribonucleoside diphosphate metabolic process + 3
paths to the root