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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine ribonucleoside monophosphate catabolic process
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Accession:GO:0009175 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside monophosphate breakdown;   pyrimidine ribonucleoside monophosphate catabolism;   pyrimidine ribonucleoside monophosphate degradation


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CMP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627
JBrowse link
G Dpys dihydropyrimidinase ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr 7:78,769,918...78,847,941
Ensembl chr 7:78,769,807...78,847,974
JBrowse link
G Nt5c3a 5'-nucleotidase, cytosolic IIIA ISO (MGI:5504568|PMID:22925580) RGD PMID:22925580 MGI:5504568 NCBI chr 4:87,238,325...87,281,234
Ensembl chr 4:87,237,949...87,281,157
JBrowse link
G Ubp1 upstream binding protein 1 ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr 8:122,196,576...122,241,368
Ensembl chr 8:122,197,027...122,240,357
JBrowse link
G Upp1 uridine phosphorylase 1 ISO (MGI:2683856|PMID:14715930) RGD PMID:14715930 MGI:2683856 NCBI chr14:89,314,234...89,334,060
Ensembl chr14:89,314,176...89,334,276
JBrowse link
G Upp2 uridine phosphorylase 2 ISO (MGI:2683856|PMID:14715930) RGD PMID:14715930 MGI:2683856 NCBI chr 3:44,806,106...44,846,464
Ensembl chr 3:44,806,106...44,846,464
JBrowse link
UMP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase ISO
IEA
(MGI:53656|PMID:5472365)
GO_REF:0000107
RGD
Ensembl
PMID:5472365 GO_REF:0000107 MGI:53656 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627
JBrowse link
G Dpys dihydropyrimidinase ISO
IEA
(MGI:53656|PMID:5472365)
GO_REF:0000107
RGD
Ensembl
PMID:5472365 GO_REF:0000107 MGI:53656 NCBI chr 7:78,769,918...78,847,941
Ensembl chr 7:78,769,807...78,847,974
JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic ISO
IEA
(MGI:1353788|PMID:10681516)
GO_REF:0000107
RGD
Ensembl
PMID:10681516 GO_REF:0000107 MGI:1353788 NCBI chr10:104,052,807...104,054,805
Ensembl chr10:104,052,831...104,054,805
JBrowse link
G Upb1 beta-ureidopropionase 1 ISO
IEA
(MGI:53656|PMID:5472365)
GO_REF:0000107
RGD
Ensembl
PMID:5472365 GO_REF:0000107 MGI:53656 NCBI chr20:14,167,383...14,193,724
Ensembl chr20:14,167,586...14,193,690
JBrowse link
G Upp1 uridine phosphorylase 1 ISO
IEA
(MGI:2683856|PMID:14715930), (MGI:73237|PMID:7744869)
GO_REF:0000107
RGD
Ensembl
PMID:7744869 PMID:14715930 GO_REF:0000107 MGI:2683856 MGI:73237 NCBI chr14:89,314,234...89,334,060
Ensembl chr14:89,314,176...89,334,276
JBrowse link
G Upp2 uridine phosphorylase 2 ISO (MGI:2683856|PMID:14715930) RGD PMID:14715930 MGI:2683856 NCBI chr 3:44,806,106...44,846,464
Ensembl chr 3:44,806,106...44,846,464
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20045
    metabolic process 12102
      organic substance metabolic process 11623
        organophosphate metabolic process 956
          nucleoside phosphate metabolic process 526
            nucleoside monophosphate metabolic process 85
              nucleoside monophosphate catabolic process 24
                pyrimidine nucleoside monophosphate catabolic process 10
                  pyrimidine ribonucleoside monophosphate catabolic process 8
                    CMP catabolic process 6
                    TMP catabolic process 0
                    UMP catabolic process 6
Path 2
Term Annotations click to browse term
  biological_process 20045
    metabolic process 12102
      nitrogen compound metabolic process 10295
        cellular nitrogen compound metabolic process 6723
          nucleobase-containing compound metabolic process 5499
            nucleobase-containing small molecule metabolic process 598
              nucleoside phosphate metabolic process 526
                nucleoside monophosphate metabolic process 85
                  ribonucleoside monophosphate metabolic process 62
                    pyrimidine ribonucleoside monophosphate metabolic process 15
                      pyrimidine ribonucleoside monophosphate catabolic process 8
                        CMP catabolic process 6
                        TMP catabolic process 0
                        UMP catabolic process 6
paths to the root