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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine ribonucleoside monophosphate metabolic process
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Accession:GO:0009173 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside monophosphate metabolism

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'de novo' UMP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEA UniProtKB GO_REF:0000041 NCBI chr 2:27,217,369...27,243,943
Ensembl chr 2:27,217,369...27,243,943 		JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) IEA UniProtKB GO_REF:0000041 NCBI chr16:72,008,744...72,027,659
Ensembl chr16:72,008,588...72,027,664 		JBrowse link
G UMPS uridine monophosphate synthetase IEA UniProtKB GO_REF:0000041 NCBI chr 3:124,730,442...124,749,273
Ensembl chr 3:124,730,433...124,749,273 		JBrowse link
CMP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000 		JBrowse link
G DPYS dihydropyrimidinase ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chr 8:104,379,429...104,467,074
Ensembl chr 8:104,330,324...104,467,055 		JBrowse link
G NT5C3A 5'-nucleotidase, cytosolic IIIA ISO (MGI:5504568|PMID:22925580) MGI PMID:22925580 MGI:5504568 NCBI chr 7:33,014,113...33,062,776
Ensembl chr 7:33,014,114...33,062,797 		JBrowse link
G UBP1 upstream binding protein 1 ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chr 3:33,388,336...33,440,405
Ensembl chr 3:33,388,336...33,441,371 		JBrowse link
G UPP1 uridine phosphorylase 1 ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736 		JBrowse link
G UPP2 uridine phosphorylase 2 ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,702...158,136,154 		JBrowse link
UMP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 IEA GOC GO_REF:0000108 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,797...47,378,839 		JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 IEA GOC GO_REF:0000108 NCBI chr20:63,939,829...63,956,447
Ensembl chr20:63,939,829...63,956,416 		JBrowse link
G UMPS uridine monophosphate synthetase IDA
IBA		 (PMID:11730338), (PMID:6893554)
(PMID:21873635)		 UniProtKB
GO_Central		 PMID:6893554 PMID:11730338 PMID:21873635 NCBI chr 3:124,730,442...124,749,273
Ensembl chr 3:124,730,433...124,749,273 		JBrowse link
G UPRT uracil phosphoribosyltransferase homolog IEA Ensembl GO_REF:0000107 NCBI chr  X:75,156,369...75,304,897
Ensembl chr  X:75,156,388...75,304,885 		JBrowse link
UMP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase IEA Ensembl GO_REF:0000107 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000 		JBrowse link
G DPYS dihydropyrimidinase IEA Ensembl GO_REF:0000107 NCBI chr 8:104,379,429...104,467,074
Ensembl chr 8:104,330,324...104,467,055 		JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic IEA Ensembl GO_REF:0000107 NCBI chr17:75,130,228...75,131,965
Ensembl chr17:75,130,225...75,131,757 		JBrowse link
G UPB1 beta-ureidopropionase 1 IEA Ensembl GO_REF:0000107 NCBI chr22:24,495,060...24,528,681
Ensembl chr22:24,494,107...24,528,390 		JBrowse link
G UPP1 uridine phosphorylase 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736 		JBrowse link
G UPP2 uridine phosphorylase 2 ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,702...158,136,154 		JBrowse link
UMP salvage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UCK1 uridine-cytidine kinase 1 IEA UniProtKB GO_REF:0000041 NCBI chr 9:131,523,801...131,531,263
Ensembl chr 9:131,523,801...131,531,264 		JBrowse link
G UCK2 uridine-cytidine kinase 2 IEA UniProtKB GO_REF:0000041 NCBI chr 1:165,827,614...165,911,618
Ensembl chr 1:165,827,614...165,911,618 		JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 IEA UniProtKB GO_REF:0000041 NCBI chr20:63,939,829...63,956,447
Ensembl chr20:63,939,829...63,956,416 		JBrowse link
G UPP1 uridine phosphorylase 1 IEA UniProtKB GO_REF:0000041 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736 		JBrowse link
G UPP2 uridine phosphorylase 2 IEA UniProtKB GO_REF:0000041 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,702...158,136,154 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18677
    metabolic process 12129
      small molecule metabolic process 2039
        nucleobase-containing small molecule metabolic process 677
          nucleoside phosphate metabolic process 593
            nucleoside monophosphate metabolic process 86
              pyrimidine nucleoside monophosphate metabolic process 23
                pyrimidine ribonucleoside monophosphate metabolic process 16
                  CMP metabolic process + 6
                  TMP metabolic process + 0
                  UMP metabolic process + 14
                  pyrimidine ribonucleoside monophosphate biosynthetic process + 10
                  pyrimidine ribonucleoside monophosphate catabolic process + 8
Path 2
Term Annotations click to browse term
  biological_process 18677
    metabolic process 12129
      cellular metabolic process 11177
        cellular nitrogen compound metabolic process 6782
          nucleobase-containing compound metabolic process 5977
            nucleobase-containing small molecule metabolic process 677
              nucleoside phosphate metabolic process 593
                nucleoside monophosphate metabolic process 86
                  ribonucleoside monophosphate metabolic process 64
                    pyrimidine ribonucleoside monophosphate metabolic process 16
                      CMP metabolic process + 6
                      TMP metabolic process + 0
                      UMP metabolic process + 14
                      pyrimidine ribonucleoside monophosphate biosynthetic process + 10
                      pyrimidine ribonucleoside monophosphate catabolic process + 8
paths to the root