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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine ribonucleoside monophosphate metabolic process
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Accession:GO:0009173 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside monophosphate metabolism


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CMP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004955435:2,007,185...2,800,907
Ensembl chrNW_004955435:2,007,185...2,766,138
JBrowse link
G Dpys dihydropyrimidinase ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004955417:28,183,771...28,244,309
Ensembl chrNW_004955417:28,185,407...28,244,307
JBrowse link
G Nt5c3a 5'-nucleotidase, cytosolic IIIA ISO (MGI:5504568|PMID:22925580) MGI PMID:22925580 MGI:5504568 NCBI chrNW_004955617:240,132...293,278
Ensembl chrNW_004955617:239,631...293,178
JBrowse link
G Ubp1 upstream binding protein 1 ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004955421:618,696...681,994
Ensembl chrNW_004955421:618,696...681,994
JBrowse link
G Upp1 uridine phosphorylase 1 ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chrNW_004955456:5,365,912...5,385,336
Ensembl chrNW_004955456:5,365,877...5,385,336
JBrowse link
G Upp2 uridine phosphorylase 2 ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chrNW_004955449:15,355,592...15,405,997
Ensembl chrNW_004955449:15,365,106...15,405,235
JBrowse link
UMP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umps uridine monophosphate synthetase ISO (PMID:11730338), (PMID:6893554) UniProtKB
RGD
PMID:6134725 PMID:6893554 PMID:11730338 RGD:5132277 NCBI chrNW_004955427:23,825,529...23,841,427
Ensembl chrNW_004955427:23,825,523...23,841,152
JBrowse link
G Uprt uracil phosphoribosyltransferase homolog ISO RGD PMID:1476792 RGD:5132591 NCBI chrNW_004955562:1,385,617...1,415,277
Ensembl chrNW_004955562:1,385,611...1,415,336
JBrowse link
UMP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004955435:2,007,185...2,800,907
Ensembl chrNW_004955435:2,007,185...2,766,138
JBrowse link
G Dpys dihydropyrimidinase ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004955417:28,183,771...28,244,309
Ensembl chrNW_004955417:28,185,407...28,244,307
JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chrNW_004955553:2,011,549...2,014,209
Ensembl chrNW_004955553:2,011,738...2,013,443
JBrowse link
G Upb1 beta-ureidopropionase 1 ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004955455:7,961,296...7,992,235
Ensembl chrNW_004955455:7,961,264...7,995,946
JBrowse link
G Upp1 uridine phosphorylase 1 ISO (MGI:2683856|PMID:14715930), (MGI:73237|PMID:7744869) MGI PMID:7744869 PMID:14715930 MGI:2683856 MGI:73237 NCBI chrNW_004955456:5,365,912...5,385,336
Ensembl chrNW_004955456:5,365,877...5,385,336
JBrowse link
G Upp2 uridine phosphorylase 2 ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chrNW_004955449:15,355,592...15,405,997
Ensembl chrNW_004955449:15,365,106...15,405,235
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11920
    metabolic process 7538
      small molecule metabolic process 1187
        nucleobase-containing small molecule metabolic process 363
          nucleoside phosphate metabolic process 325
            nucleoside monophosphate metabolic process 44
              pyrimidine nucleoside monophosphate metabolic process 15
                pyrimidine ribonucleoside monophosphate metabolic process 10
                  CMP metabolic process + 6
                  TMP metabolic process + 0
                  UMP metabolic process + 8
                  pyrimidine ribonucleoside monophosphate biosynthetic process + 2
                  pyrimidine ribonucleoside monophosphate catabolic process + 8
Path 2
Term Annotations click to browse term
  biological_process 11920
    metabolic process 7538
      cellular metabolic process 6946
        cellular nitrogen compound metabolic process 4060
          nucleobase-containing compound metabolic process 3560
            nucleobase-containing small molecule metabolic process 363
              nucleoside phosphate metabolic process 325
                nucleoside monophosphate metabolic process 44
                  ribonucleoside monophosphate metabolic process 36
                    pyrimidine ribonucleoside monophosphate metabolic process 10
                      CMP metabolic process + 6
                      TMP metabolic process + 0
                      UMP metabolic process + 8
                      pyrimidine ribonucleoside monophosphate biosynthetic process + 2
                      pyrimidine ribonucleoside monophosphate catabolic process + 8
paths to the root