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ONTOLOGY REPORT - ANNOTATIONS

Term:nucleoside catabolic process
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Accession:GO:0009164 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).
Synonyms:exact_synonym: nucleoside breakdown;   nucleoside catabolism;   nucleoside degradation


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nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736 		JBrowse link
G UPP2 uridine phosphorylase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr15:65,088,652...65,131,739
Ensembl chr15:65,088,795...65,131,788 		JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:8894685)
(PMID:7670465)
(PMID:11591798), (PMID:8663040)
(PMID:1618849), (PMID:2015347), (PMID:2387582), (PMID:7592575), (PMID:8663040), (PMID:8894685), (PMID:9272950)
(PMID:10720488), (PMID:10899903), (PMID:14607964), (PMID:15630442), (PMID:16841096), (PMID:18340377), (PMID:9478961)
(PMID:7731963), (PMID:9272950)		 MGI
TreeGrafter
GO_Central
Ensembl
RGD		 PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:152995394 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,497...47,072,245 		JBrowse link
G ADA2 adenosine deaminase 2 involved_in ISS
IBA
IEA		 UniProt
GO_Central
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:69,526,413...69,554,640
Ensembl chr 5:69,526,435...69,554,661 		JBrowse link
G ADAL adenosine deaminase like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:128,089,422...128,125,691
Ensembl chr 1:128,095,940...128,120,765 		JBrowse link
G TUBGCP4 tubulin gamma complex component 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:128,029,393...128,084,039
Ensembl chr 1:128,029,406...128,083,958 		JBrowse link
G UOX urate oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,343,592...129,375,724 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,987,126...108,053,169 		JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:62,777,236...62,787,342
Ensembl chr 5:62,777,352...62,787,369 		JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:62,811,819...62,820,532
Ensembl chr 5:62,810,879...62,820,173 		JBrowse link
G APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:36,364,258...36,381,012
Ensembl chr 7:36,364,300...36,384,295 		JBrowse link
G CDA cytidine deaminase involved_in ISO
IBA
IEA		 RGD
GO_Central
InterPro
Ensembl		 PMID:675715 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 RGD:2316616 NCBI chr 6:78,824,248...78,849,154
Ensembl chr 6:78,824,270...78,849,547 		JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:18,467,508...18,518,137
Ensembl chr11:18,458,301...18,518,146 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:78,863,195...78,884,663
Ensembl chr 6:78,863,190...78,884,640 		JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7592575)
(PMID:10720488), (PMID:14607964), (PMID:9478961)
(PMID:7731963), (PMID:9272950)
(PMID:7670465)		 Ensembl
MGI		 PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 More... GO_REF:0000107 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,497...47,072,245 		JBrowse link
G PNP purine nucleoside phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,447,012 		JBrowse link
G UOX urate oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,343,592...129,375,724 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,987,126...108,053,169 		JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:225,425,389...225,589,835
Ensembl chr 1:225,403,138...225,589,827 		JBrowse link
G UOX urate oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,343,592...129,375,724 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,987,126...108,053,169 		JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,447,012 		JBrowse link
G UOX urate oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,343,592...129,375,724 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,987,126...108,053,169 		JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,590,982...56,706,479
Ensembl chr 5:56,590,980...56,706,458 		JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16964310) MGI
Ensembl		 PMID:16964310 GO_REF:0000107 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,447,012 		JBrowse link
G UOX urate oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,343,592...129,375,724 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,987,126...108,053,169 		JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTAP methylthioadenosine phosphorylase NOT|involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chr 1:200,882,954...200,934,389
Ensembl chr 1:200,882,956...200,934,445 		JBrowse link
G PNP purine nucleoside phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,447,012 		JBrowse link
purine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT1 nudix hydrolase 1 involved_in ISO (PMID:11139615) UniProt PMID:11139615 NCBI chr 3:1,567,417...1,575,801
Ensembl chr 3:1,566,915...1,576,234 		JBrowse link
purine ribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:40,896,392...40,913,609
Ensembl chr 7:40,896,470...40,912,426 		JBrowse link
pyrimidine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,231...49,565,075 		JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase acts_upstream_of_or_within ISO (PMID:12023972) RGD
MGI		 PMID:11741948 PMID:12023972 RGD:730275 NCBI chr17:37,726,084...37,744,378
Ensembl chr17:37,726,084...37,744,461 		JBrowse link
thymidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,414...120,712,459 		JBrowse link
uridine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736 		JBrowse link
G UPP2 uridine phosphorylase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:65,088,652...65,131,739
Ensembl chr15:65,088,795...65,131,788 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17813
    metabolic process 10347
      catabolic process 2542
        small molecule catabolic process 359
          nucleobase-containing small molecule catabolic process 28
            nucleoside catabolic process 24
              deoxyribonucleoside catabolic process + 8
              purine nucleoside catabolic process + 12
              pyridine nucleoside catabolic process + 2
              pyrimidine nucleoside catabolic process + 10
              ribonucleoside catabolic process + 18
Path 2
Term Annotations click to browse term
  biological_process 17813
    metabolic process 10347
      cellular metabolic process 9044
        cellular aromatic compound metabolic process 5337
          nucleobase-containing compound metabolic process 5112
            nucleobase-containing small molecule metabolic process 599
              nucleoside metabolic process 55
                nucleoside catabolic process 24
                  deoxyribonucleoside catabolic process + 8
                  purine nucleoside catabolic process + 12
                  pyridine nucleoside catabolic process + 2
                  pyrimidine nucleoside catabolic process + 10
                  ribonucleoside catabolic process + 18
paths to the root