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ONTOLOGY REPORT - ANNOTATIONS


Term:deoxyribonucleoside monophosphate biosynthetic process
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Accession:GO:0009157 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.
Synonyms:exact_synonym: deoxyribonucleoside monophosphate anabolism;   deoxyribonucleoside monophosphate biosynthesis;   deoxyribonucleoside monophosphate formation;   deoxyribonucleoside monophosphate synthesis


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deoxyribonucleoside monophosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dck deoxycytidine kinase JBrowse link 14 20,935,442 20,952,939 RGD:1600115
G Dguok deoxyguanosine kinase JBrowse link 4 115,180,433 115,208,061 RGD:1600115
G Tk1 thymidine kinase 1 JBrowse link 10 106,817,556 106,828,888 RGD:1600115
G Tk2 thymidine kinase 2 JBrowse link 19 917,203 939,236 RGD:1600115
dAMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dck deoxycytidine kinase JBrowse link 14 20,935,442 20,952,939 RGD:1600115
dTMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dctd dCMP deaminase JBrowse link 16 47,177,144 47,222,850 RGD:13792537
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:1624291
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:1545055
RGD:13792537
RGD:1624291
dUMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07001512.1 RGD:13792537
RGD:1600115
G Dctd dCMP deaminase JBrowse link 16 47,177,144 47,222,850 RGD:13792537
G Dut deoxyuridine triphosphatase JBrowse link 3 117,514,399 117,525,450 RGD:2300191
RGD:13792537
RGD:1600115
RGD:2301218

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19678
    metabolic process 11953
      organic substance metabolic process 11358
        organophosphate metabolic process 949
          nucleoside phosphate metabolic process 498
            nucleoside monophosphate metabolic process 70
              nucleoside monophosphate biosynthetic process 46
                deoxyribonucleoside monophosphate biosynthetic process 9
                  purine deoxyribonucleoside monophosphate biosynthetic process + 1
                  pyrimidine deoxyribonucleoside monophosphate biosynthetic process + 5
Path 2
Term Annotations click to browse term
  biological_process 19678
    metabolic process 11953
      cellular metabolic process 10781
        cellular aromatic compound metabolic process 5534
          nucleobase-containing compound metabolic process 5311
            nucleobase-containing small molecule metabolic process 577
              nucleoside phosphate metabolic process 498
                nucleoside monophosphate metabolic process 70
                  nucleoside monophosphate biosynthetic process 46
                    deoxyribonucleoside monophosphate biosynthetic process 9
                      purine deoxyribonucleoside monophosphate biosynthetic process + 1
                      pyrimidine deoxyribonucleoside monophosphate biosynthetic process + 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.