Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:deoxyribonucleoside monophosphate biosynthetic process
go back to main search page
Accession:GO:0009157 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.
Synonyms:exact_synonym: deoxyribonucleoside monophosphate anabolism;   deoxyribonucleoside monophosphate biosynthesis;   deoxyribonucleoside monophosphate formation;   deoxyribonucleoside monophosphate synthesis



show annotations for term's descendants           Sort by:
deoxyribonucleoside monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC112350.1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 3:109,190,742...109,191,879 JBrowse link
G ENSRNOG00000062465 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr14:97,517,407...97,518,328 JBrowse link
G ENSRNOG00000063353 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 4:54,767,356...54,768,047 JBrowse link
G Tk1 thymidine kinase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:103,533,449...103,544,818
Ensembl chr10:103,031,521...103,046,920
JBrowse link
G Tk2 thymidine kinase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:708,859...731,786
Ensembl chr19:708,891...730,924
JBrowse link
dAMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase involved_in IEA
ISO
GO_REF:0000107
(PMID:2835956)
Ensembl
RGD
PMID:2835956 GO_REF:0000107 NCBI chr15:2,912,543...3,295,745
Ensembl chr15:2,863,244...3,246,510
JBrowse link
G Dck deoxycytidine kinase involved_in IEA
ISO
GO_REF:0000107
(PMID:8748457)
Ensembl
RGD
PMID:8748457 GO_REF:0000107 NCBI chr14:19,589,298...19,610,326
Ensembl chr14:19,305,218...19,326,247
JBrowse link
G Dguok deoxyguanosine kinase involved_in ISO (PMID:19221117) RGD PMID:19221117 NCBI chr 4:115,987,101...116,014,733
Ensembl chr 4:115,979,094...116,014,733
JBrowse link
dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctd dCMP deaminase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:50,799,699...50,831,398
Ensembl chr16:44,055,128...44,098,446
JBrowse link
G Dut deoxyuridine triphosphatase involved_in ISO (PMID:10952785), (PMID:15322254) RGD PMID:10952785 PMID:15322254 NCBI chr 3:112,498,864...112,509,994
Ensembl chr 3:112,498,982...112,510,771
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (PMID:19513116) RGD PMID:19513116 NCBI chr10:45,968,959...45,990,341
Ensembl chr10:45,468,700...45,497,820
JBrowse link
G Tyms thymidylate synthetase involved_in IDA
ISO
IBA
IEA
(PMID:22057276)
GO_REF:0000033
GO_REF:0000002
(PMID:11278511), (PMID:15093541), (PMID:8845352)
RGD
GO_Central
InterPro
PMID:8845352 PMID:11278511 PMID:15093541 PMID:22057276 PMID:9894005 GO_REF:0000002 GO_REF:0000033, RGD:1545055 NCBI chr 9:120,760,057...120,776,149
Ensembl chr 9:113,313,452...113,329,536
JBrowse link
dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001512.1 involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 Ensembl chr 1:48,369,044...48,369,595 JBrowse link
G Dctd dCMP deaminase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:50,799,699...50,831,398
Ensembl chr16:44,055,128...44,098,446
JBrowse link
G Dut deoxyuridine triphosphatase involved_in IDA
IBA
IEA
GO_REF:0000033
GO_REF:0000041
GO_Central
UniProt
RGD
PMID:3032103 PMID:1315924 GO_REF:0000033 GO_REF:0000041, RGD:2300191, RGD:2301218 NCBI chr 3:112,498,864...112,509,994
Ensembl chr 3:112,498,982...112,510,771
JBrowse link
G ENSRNOG00000069939 involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 Ensembl chr13:67,763,505...67,765,634 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20553
    cellular process 19543
      metabolic process 12181
        biosynthetic process 8648
          nucleobase-containing compound biosynthetic process 4862
            nucleoside phosphate biosynthetic process 307
              nucleoside monophosphate biosynthetic process 52
                deoxyribonucleoside monophosphate biosynthetic process 14
                  purine deoxyribonucleoside monophosphate biosynthetic process + 3
                  pyrimidine deoxyribonucleoside monophosphate biosynthetic process + 6
Path 2
Term Annotations click to browse term
  biological_process 20553
    cellular process 19543
      metabolic process 12181
        primary metabolic process 10757
          nucleobase-containing compound metabolic process 5951
            nucleobase-containing small molecule metabolic process 732
              nucleoside phosphate metabolic process 697
                nucleoside monophosphate metabolic process 90
                  deoxyribonucleoside monophosphate metabolic process 33
                    deoxyribonucleoside monophosphate biosynthetic process 14
                      purine deoxyribonucleoside monophosphate biosynthetic process + 3
                      pyrimidine deoxyribonucleoside monophosphate biosynthetic process + 6
paths to the root