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ONTOLOGY REPORT - ANNOTATIONS


Term:purine ribonucleotide catabolic process
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Accession:GO:0009154 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: purine ribonucleotide breakdown;   purine ribonucleotide catabolism;   purine ribonucleotide degradation


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purine ribonucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07060778.1 RGD:13792537
G Hint1 histidine triad nucleotide binding protein 1 JBrowse link 10 40,208,236 40,211,981 RGD:1624291
RGD:13792537
RGD:1600115
G Hint1-ps1 histidine triad nucleotide binding protein 1, pseudogene 1 JBrowse link 4 93,405,665 93,406,239 RGD:13792537
acetyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:1624291
G Nudt7 nudix hydrolase 7 JBrowse link 19 46,455,745 46,470,070 RGD:1624291
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 JBrowse link X 17,540,036 17,541,296 RGD:13792537
G Nudt11 nudix hydrolase 11 JBrowse link X 17,171,510 17,215,108 RGD:13792537
G Nudt3 nudix hydrolase 3 JBrowse link 20 7,155,744 7,208,292 RGD:13792537
G Nudt4 nudix hydrolase 4 JBrowse link 7 36,643,916 36,660,334 RGD:13792537
ADP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt9 nudix hydrolase 9 JBrowse link 14 7,036,809 7,054,739 RGD:1624291
AMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link 1 175,585,301 175,630,479 RGD:632203
G Nt5e 5' nucleotidase, ecto JBrowse link 8 95,969,002 96,012,733 RGD:5134346
RGD:13792537
RGD:1600115
RGD:1624291
cAMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde10a phosphodiesterase 10A JBrowse link 1 52,360,296 52,544,448 RGD:1600115
G Pde4a phosphodiesterase 4A JBrowse link 8 22,189,533 22,234,036 RGD:1600115
G Pde4b phosphodiesterase 4B JBrowse link 5 121,759,236 122,136,814 RGD:1600115
G Pde4c phosphodiesterase 4C JBrowse link 16 20,442,305 20,466,386 RGD:1600115
G Pde4d phosphodiesterase 4D JBrowse link 2 40,219,999 41,468,551 RGD:1600115
RGD:13792537
RGD:1624291
G Pde7a phosphodiesterase 7A JBrowse link 2 104,042,124 104,134,101 RGD:1600115
cGMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde10a phosphodiesterase 10A JBrowse link 1 52,360,296 52,544,448 RGD:1600115
G Pde1a phosphodiesterase 1A JBrowse link 3 66,803,247 67,263,658 RGD:2312521
G Pde2a phosphodiesterase 2A JBrowse link 1 166,534,643 166,626,158 RGD:1600115
RGD:13792537
RGD:1624291
G Pde5a phosphodiesterase 5A JBrowse link 2 226,899,604 227,044,916 RGD:1624291
RGD:1600115
G Pde9a phosphodiesterase 9A JBrowse link 20 10,123,624 10,216,325 RGD:1600115
RGD:13792537
RGD:1624291
coenzyme A catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt7 nudix hydrolase 7 JBrowse link 19 46,455,745 46,470,070 RGD:1624291
RGD:13792537
GDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt18 nudix hydrolase 18 JBrowse link 15 52,265,557 52,268,081 RGD:1624291
RGD:1600115
GMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
RGD:1600115
G LOC103689983 hypoxanthine-guanine phosphoribosyltransferase JBrowse link X 158,623,231 158,655,277 RGD:1600115
G Prtfdc1 phosphoribosyl transferase domain containing 1 JBrowse link 17 87,926,242 88,037,040 RGD:1624291
IDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt16 nudix hydrolase 16 JBrowse link 8 113,673,069 113,675,124 RGD:1624291
G Nudt9 nudix hydrolase 9 JBrowse link 14 7,036,809 7,054,739 RGD:1624291
ITP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itpa inosine triphosphatase JBrowse link 3 123,209,611 123,221,266 RGD:1624291
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot7 acyl-CoA thioesterase 7 JBrowse link 5 169,357,582 169,450,215 RGD:1624291
malonyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mlycd malonyl-CoA decarboxylase JBrowse link 19 52,032,950 52,048,773 RGD:1624291
RGD:1600115
RGD:13792537
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot7 acyl-CoA thioesterase 7 JBrowse link 5 169,357,582 169,450,215 RGD:1624291
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
RGD:1600115
XDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt16 nudix hydrolase 16 JBrowse link 8 113,673,069 113,675,124 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      organic substance metabolic process 11495
        carbohydrate derivative metabolic process 1021
          carbohydrate derivative catabolic process 141
            ribonucleotide catabolic process 32
              purine ribonucleotide catabolic process 31
                2-hydroxybenzoyl-CoA catabolic process 0
                ADP catabolic process 1
                AMP catabolic process 2
                GDP catabolic process 1
                GMP catabolic process + 3
                IDP catabolic process 2
                IMP catabolic process 0
                ITP catabolic process 1
                XDP catabolic process 1
                acetyl-CoA catabolic process + 2
                adenosine 5'-(hexahydrogen pentaphosphate) catabolic process 4
                benzoyl-CoA catabolic process 0
                cAMP catabolic process 6
                cGMP catabolic process 5
                coenzyme A catabolic process 1
                fatty-acyl-CoA catabolic process + 2
                guanosine pentaphosphate catabolic process 0
                guanosine tetraphosphate catabolic process 0
                malonyl-CoA catabolic process 1
                succinyl-CoA catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      nitrogen compound metabolic process 10193
        cellular nitrogen compound metabolic process 6542
          nucleobase-containing compound metabolic process 5344
            nucleobase-containing small molecule metabolic process 582
              nucleoside phosphate metabolic process 503
                nucleotide metabolic process 496
                  ribonucleotide metabolic process 403
                    ribonucleotide catabolic process 32
                      purine ribonucleotide catabolic process 31
                        2-hydroxybenzoyl-CoA catabolic process 0
                        ADP catabolic process 1
                        AMP catabolic process 2
                        GDP catabolic process 1
                        GMP catabolic process + 3
                        IDP catabolic process 2
                        IMP catabolic process 0
                        ITP catabolic process 1
                        XDP catabolic process 1
                        acetyl-CoA catabolic process + 2
                        adenosine 5'-(hexahydrogen pentaphosphate) catabolic process 4
                        benzoyl-CoA catabolic process 0
                        cAMP catabolic process 6
                        cGMP catabolic process 5
                        coenzyme A catabolic process 1
                        fatty-acyl-CoA catabolic process + 2
                        guanosine pentaphosphate catabolic process 0
                        guanosine tetraphosphate catabolic process 0
                        malonyl-CoA catabolic process 1
                        succinyl-CoA catabolic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.