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ONTOLOGY REPORT - ANNOTATIONS


Term:purine deoxyribonucleotide biosynthetic process
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Accession:GO:0009153 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: purine deoxyribonucleotide anabolism;   purine deoxyribonucleotide biosynthesis;   purine deoxyribonucleotide formation;   purine deoxyribonucleotide synthesis



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dAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dck deoxycytidine kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:19,305,218...19,326,247
Ensembl chr14:19,305,218...19,326,247
JBrowse link
dAMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase involved_in ISO (MGI:6717101|PMID:2835956) RGD PMID:2835956 MGI:6717101 NCBI chr15:2,863,241...3,246,453
Ensembl chr15:2,863,244...3,246,510
JBrowse link
G Dck deoxycytidine kinase involved_in ISO (MGI:6717103|PMID:8748457) RGD PMID:8748457 MGI:6717103 NCBI chr14:19,305,218...19,326,247
Ensembl chr14:19,305,218...19,326,247
JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3620422|PMID:12163459)
Ensembl
RGD
PMID:12163459 GO_REF:0000107 MGI:3620422 NCBI chr15:2,863,241...3,246,453
Ensembl chr15:2,863,244...3,246,510
JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in IDA
ISO
(PMID:31201273) RGD PMID:31201273 PMID:4307347 RGD:5147877 NCBI chr10:43,971,514...43,988,658
Ensembl chr10:43,971,509...43,980,107
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19391
    metabolic process 11735
      organic substance metabolic process 11277
        carbohydrate derivative metabolic process 1012
          deoxyribose phosphate metabolic process 40
            deoxyribose phosphate biosynthetic process 12
              2'-deoxyribonucleotide biosynthetic process 12
                purine deoxyribonucleotide biosynthetic process 3
                  dADP biosynthetic process 0
                  dAMP biosynthetic process + 2
                  dATP biosynthetic process + 1
                  dGDP biosynthetic process 1
                  dGMP biosynthetic process + 0
                  dGTP biosynthetic process + 0
                  purine deoxyribonucleotide salvage + 2
Path 2
Term Annotations click to browse term
  biological_process 19391
    metabolic process 11735
      cellular metabolic process 10655
        cellular aromatic compound metabolic process 5580
          nucleobase-containing compound metabolic process 5360
            nucleobase-containing small molecule metabolic process 573
              nucleoside phosphate metabolic process 505
                nucleotide metabolic process 497
                  deoxyribonucleotide metabolic process 45
                    2'-deoxyribonucleotide metabolic process 39
                      purine deoxyribonucleotide metabolic process 22
                        purine deoxyribonucleotide biosynthetic process 3
                          dADP biosynthetic process 0
                          dAMP biosynthetic process + 2
                          dATP biosynthetic process + 1
                          dGDP biosynthetic process 1
                          dGMP biosynthetic process + 0
                          dGTP biosynthetic process + 0
                          purine deoxyribonucleotide salvage + 2
paths to the root