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ONTOLOGY REPORT - ANNOTATIONS

Term:purine deoxyribonucleotide metabolic process
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Accession:GO:0009151 term browser browse the term
Definition:The chemical reactions and pathways involving purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: purine deoxyribonucleotide metabolism

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dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:5,929,262...5,932,334
Ensembl chrNW_004936555:5,928,601...5,932,400 		JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (PMID:10720488) MGI PMID:10720488 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:21,535,197...21,542,417
Ensembl chrNW_004936474:21,535,467...21,542,588 		JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
dAMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:4,560,078...5,023,780
Ensembl chrNW_004936521:4,557,971...5,023,800 		JBrowse link
G Dck deoxycytidine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:3,819,239...3,846,692
Ensembl chrNW_004936598:3,817,994...3,843,241 		JBrowse link
G Dguok deoxyguanosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936556:226,643...263,517
Ensembl chrNW_004936556:226,627...264,905 		JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12163459) Ensembl
MGI		 PMID:12163459 GO_REF:0000107 NCBI chrNW_004936521:4,560,078...5,023,780
Ensembl chrNW_004936521:4,557,971...5,023,800 		JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:7670465)
(PMID:7592575)
(PMID:14607964), (PMID:9478961)
(PMID:7731963)		 MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:4,180,607...4,238,623
Ensembl chrNW_004936561:4,180,546...4,229,036 		JBrowse link
dATP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak2 adenylate kinase 2 ISO RGD PMID:5010295 RGD:5490216 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:5010295 RGD:5490216 NCBI chrNW_004936503:497,391...517,011
Ensembl chrNW_004936503:496,965...516,888 		JBrowse link
G Guk1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chrNW_004936864:76,707...86,479
Ensembl chrNW_004936864:76,128...79,520 		JBrowse link
G Oga O-GlcNAcase ISO RGD PMID:17573462 RGD:2305953 NCBI chrNW_004936600:3,983,983...3,996,360 JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:4307347 GO_REF:0000107 RGD:5147877 NCBI chrNW_004936864:76,707...86,479
Ensembl chrNW_004936864:76,128...79,520 		JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:5,929,262...5,932,334
Ensembl chrNW_004936555:5,928,601...5,932,400 		JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO PMID:17234634 MGI PMID:17234634 RGD:8553712 NCBI chrNW_004936476:16,740,643...16,742,831
Ensembl chrNW_004936476:16,740,581...16,742,866 		JBrowse link
G Gda guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:8,191,925...8,279,806
Ensembl chrNW_004936503:8,192,049...8,278,790 		JBrowse link
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:430,274...432,027
Ensembl chrNW_004936594:430,506...432,095 		JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:21,535,197...21,542,417
Ensembl chrNW_004936474:21,535,467...21,542,588 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:5560407) MGI PMID:5560407 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
dGMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chrNW_004936864:76,707...86,479
Ensembl chrNW_004936864:76,128...79,520 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:1659319), (PMID:9371705)
PMID:6260203		 UniProt PMID:1659319 PMID:6260203 PMID:9371705 RGD:151356611 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt15 nudix hydrolase 15 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936565:1,380,981...1,389,908
Ensembl chrNW_004936565:1,381,655...1,389,048 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936561:4,180,607...4,238,623
Ensembl chrNW_004936561:4,180,546...4,229,036 		JBrowse link
dGTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dguok deoxyguanosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1664183), (PMID:7918681) Ensembl
MGI		 PMID:1664183 PMID:7918681 GO_REF:0000107 NCBI chrNW_004936556:226,643...263,517
Ensembl chrNW_004936556:226,627...264,905 		JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965734 U8 snoRNA-decapping enzyme involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20081199) Ensembl
MGI		 PMID:20081199 GO_REF:0000107 NCBI chrNW_004936529:4,825,277...4,827,011
Ensembl chrNW_004936529:4,825,189...4,826,886 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15969
    metabolic process 9630
      organic substance metabolic process 9204
        carbohydrate derivative metabolic process 987
          deoxyribonucleotide metabolic process 42
            2'-deoxyribonucleotide metabolic process 40
              purine deoxyribonucleotide metabolic process 21
                dADP metabolic process + 1
                dAMP metabolic process + 9
                dATP metabolic process + 7
                dGDP metabolic process + 2
                dGMP metabolic process + 9
                dGTP metabolic process + 3
                dITP metabolic process + 1
                purine deoxyribonucleotide biosynthetic process + 4
                purine deoxyribonucleotide catabolic process + 14
                purine deoxyribonucleotide interconversion 0
Path 2
Term Annotations click to browse term
  biological_process 15969
    metabolic process 9630
      organic substance metabolic process 9204
        organic cyclic compound metabolic process 5206
          nucleobase-containing compound metabolic process 4756
            nucleobase-containing small molecule metabolic process 583
              nucleoside phosphate metabolic process 523
                nucleotide metabolic process 516
                  deoxyribonucleotide metabolic process 42
                    2'-deoxyribonucleotide metabolic process 40
                      purine deoxyribonucleotide metabolic process 21
                        dADP metabolic process + 1
                        dAMP metabolic process + 9
                        dATP metabolic process + 7
                        dGDP metabolic process + 2
                        dGMP metabolic process + 9
                        dGTP metabolic process + 3
                        dITP metabolic process + 1
                        purine deoxyribonucleotide biosynthetic process + 4
                        purine deoxyribonucleotide catabolic process + 14
                        purine deoxyribonucleotide interconversion 0
paths to the root