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ONTOLOGY REPORT - ANNOTATIONS


Term:purine deoxyribonucleotide metabolic process
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Accession:GO:0009151 term browser browse the term
Definition:The chemical reactions and pathways involving purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: purine deoxyribonucleotide metabolism


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dADP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
dADP phosphorylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 ISO (PMID:23416111) RGD PMID:23416111 NCBI chr20:46,044,901...46,162,015
Ensembl chr20:46,044,892...46,162,073
JBrowse link
dAMP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dck deoxycytidine kinase IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:20,935,442...20,952,939
Ensembl chr14:20,935,369...20,953,095
JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase ISO
IEA
(MGI:MGI:3620422|PMID:12163459)
GO_REF:0000107
RGD
Ensembl
PMID:12163459 GO_REF:0000107, MGI:MGI:3620422 NCBI chr15:3,033,535...3,435,888
Ensembl chr15:3,033,495...3,435,888
JBrowse link
dATP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO MGI:MGI:1857117|MGI:MGI:2155977|MGI:MGI:2683027 (MGI:MGI:2155238|PMID:9478961), (MGI:MGI:3619310|PMID:14607964), (MGI:MGI:72798|PMID:7731963), (MGI:MGI:74163|PMID:7670465), (MGI:MGI:76875|PMID:7592575) RGD PMID:7592575, PMID:7670465, PMID:7731963, PMID:9478961, PMID:14607964 MGI:MGI:2155238, MGI:MGI:3619310, MGI:MGI:72798, MGI:MGI:74163, MGI:MGI:76875 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Nudt1 nudix hydrolase 1 ISO
ISS
(PMID:10373420)
GO_REF:0000024
RGD
UniProt
PMID:10373420 GO_REF:0000024 NCBI chr12:16,391,578...16,398,771
Ensembl chr12:16,391,578...16,395,029
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:24141705)
(MGI:MGI:5828027|PMID:27920203)
RGD PMID:24141705, PMID:27920203 MGI:MGI:5828027 NCBI chr 3:153,210,829...153,250,705
Ensembl chr 3:153,210,829...153,250,641
JBrowse link
dATP metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak2 adenylate kinase 2 IDA RGD PMID:5010295 RGD:5490216 NCBI chr 5:147,185,474...147,204,050
Ensembl chr 5:147,185,474...147,204,050
JBrowse link
G Ak3 adenylate kinase 3 IDA RGD PMID:5010295 RGD:5490216 NCBI chr 1:247,144,486...247,169,690
Ensembl chr 1:247,144,491...247,169,693
JBrowse link
G Guk1 guanylate kinase 1 IDA RGD PMID:4307347 RGD:5147877 NCBI chr10:45,535,617...45,552,455
Ensembl chr10:45,535,627...45,543,897
JBrowse link
G Oga O-GlcNAcase IMP RGD PMID:17573462 RGD:2305953 NCBI chr 1:265,506,752...265,542,452
Ensembl chr 1:265,507,451...265,542,276
JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 IDA
ISO
(PMID:31201273) RGD PMID:31201273, PMID:4307347 RGD:5147877 NCBI chr10:45,535,617...45,552,455
Ensembl chr10:45,535,627...45,543,897
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
dGDP phosphorylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 ISO
IBA
(PMID:23416111)
PMID:21873635
RGD PMID:23416111, PMID:21873635 RGD:13792537 NCBI chr20:46,044,901...46,162,015
Ensembl chr20:46,044,892...46,162,073
JBrowse link
dGMP metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 IDA RGD PMID:4307347 RGD:5147877 NCBI chr10:45,535,617...45,552,455
Ensembl chr10:45,535,627...45,543,897
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt1 nudix hydrolase 1 ISO
ISS
(MGI:MGI:77076|PMID:7592783)
(PMID:10373420), (PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:7592783, PMID:10373420, PMID:22556419 GO_REF:0000024, MGI:MGI:77076 NCBI chr12:16,391,578...16,398,771
Ensembl chr12:16,391,578...16,395,029
JBrowse link
G Nudt15 nudix hydrolase 15 ISO
IBA
(PMID:22556419)
PMID:21873635
RGD PMID:22556419, PMID:21873635 RGD:13792537 NCBI chr15:55,417,774...55,456,698
Ensembl chr15:55,419,502...55,456,698
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO
IBA
(PMID:24217394)
PMID:21873635
RGD PMID:24217394, PMID:21873635 RGD:13792537 NCBI chr 3:153,210,829...153,250,705
Ensembl chr 3:153,210,829...153,250,641
JBrowse link
dGTP metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dguok deoxyguanosine kinase ISO (MGI:MGI:49028|PMID:1664183), (MGI:MGI:69194|PMID:7918681) RGD PMID:1664183, PMID:7918681 MGI:MGI:49028, MGI:MGI:69194 NCBI chr 4:115,180,433...115,208,061
Ensembl chr 4:115,180,433...115,208,061
JBrowse link
dITP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix hydrolase 16 ISO MGI:MGI:96622 (MGI:MGI:5009783|PMID:20081199) RGD PMID:20081199 MGI:MGI:5009783 NCBI chr 8:113,673,069...113,675,124
Ensembl chr 8:113,672,758...113,675,128
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      nitrogen compound metabolic process 10366
        organonitrogen compound metabolic process 7153
          purine-containing compound metabolic process 480
            purine nucleotide metabolic process 430
              purine deoxyribonucleotide metabolic process 14
                dADP metabolic process + 2
                dAMP metabolic process + 1
                dATP metabolic process + 8
                dGDP metabolic process + 3
                dGMP metabolic process + 1
                dGTP metabolic process + 4
                dITP metabolic process + 1
                purine deoxyribonucleotide biosynthetic process + 3
                purine deoxyribonucleotide catabolic process + 6
                purine deoxyribonucleotide interconversion 0
Path 2
Term Annotations click to browse term
  biological_process 20028
    cellular process 18800
      cellular metabolic process 11085
        cellular nitrogen compound metabolic process 6696
          nucleobase-containing compound metabolic process 5489
            nucleobase-containing small molecule metabolic process 591
              nucleoside phosphate metabolic process 511
                nucleotide metabolic process 504
                  deoxyribonucleotide metabolic process 32
                    2'-deoxyribonucleotide metabolic process 26
                      purine deoxyribonucleotide metabolic process 14
                        dADP metabolic process + 2
                        dAMP metabolic process + 1
                        dATP metabolic process + 8
                        dGDP metabolic process + 3
                        dGMP metabolic process + 1
                        dGTP metabolic process + 4
                        dITP metabolic process + 1
                        purine deoxyribonucleotide biosynthetic process + 3
                        purine deoxyribonucleotide catabolic process + 6
                        purine deoxyribonucleotide interconversion 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.