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ONTOLOGY REPORT - ANNOTATIONS

Term:nucleoside triphosphate biosynthetic process
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Accession:GO:0009142 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.
Synonyms:exact_synonym: nucleoside triphosphate anabolism;   nucleoside triphosphate biosynthesis;   nucleoside triphosphate formation;   nucleoside triphosphate synthesis


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nucleoside triphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041 		JBrowse link
G Ak3 adenylate kinase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625 		JBrowse link
G Ak4 adenylate kinase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:116,039,222...116,099,064
Ensembl chr 5:116,039,616...116,098,618 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO (PMID:1851158), (PMID:25679041) RGD PMID:1851158 PMID:25679041 NCBI chr10:78,898,097...78,903,514
Ensembl chr10:78,897,770...78,903,538 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in ISO (PMID:30587587) RGD PMID:30587587 NCBI chr10:13,917,309...13,918,415
Ensembl chr10:13,917,403...13,918,359 		JBrowse link
'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:134,125,022...134,154,155
Ensembl chr 5:134,125,025...134,154,180 		JBrowse link
G Ctps2 CTP synthase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:31,645,873...31,786,733
Ensembl chr  X:31,645,873...31,786,733 		JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 IDA RGD PMID:5484813 RGD:2301093 NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625 		JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase, fructose-bisphosphate A involved_in ISO (PMID:14615364) RGD PMID:14615364 NCBI chr 1:181,402,275...181,407,476
Ensembl chr 1:181,402,275...181,406,182 		JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:21106936) RGD PMID:21106936 NCBI chr18:71,292,406...71,300,342
Ensembl chr18:71,292,374...71,300,794 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:17510399), (PMID:21106936) RGD PMID:17510399 PMID:21106936 NCBI chr 7:515,454...521,858
Ensembl chr 7:515,460...567,273 		JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:9,421,665...9,428,236
Ensembl chr12:9,421,579...9,428,236 		JBrowse link
G Cox11 cytochrome c oxidase copper chaperone COX11 involved_in ISO (PMID:36030551) RGD PMID:36030551 NCBI chr10:75,458,735...75,465,322
Ensembl chr10:75,458,749...75,465,322 		JBrowse link
G Dmac2l distal membrane arm assembly component 2 like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:88,205,580...88,223,934
Ensembl chr 6:88,205,700...88,223,933 		JBrowse link
G Ldhc lactate dehydrogenase C acts_upstream_of_or_within ISO MGI:3775042 (PMID:18367675) RGD PMID:18367675 NCBI chr 1:97,385,984...97,403,382
Ensembl chr 1:97,382,379...97,403,378 		JBrowse link
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2451080 (PMID:24287405)		 Ensembl
RGD		 PMID:24287405 GO_REF:0000107 NCBI chr 1:232,024,351...232,057,735
Ensembl chr 1:232,024,356...232,057,633 		JBrowse link
G Nudt2 nudix hydrolase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:56,628,265...56,643,104
Ensembl chr 5:56,628,265...56,643,104 		JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in ISO
IEA		 (PMID:12851387)
GO_REF:0000107		 RGD
Ensembl		 PMID:12851387 GO_REF:0000107 NCBI chr 4:34,179,224...34,361,912
Ensembl chr 4:34,179,224...34,361,902 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:10513816)		 UniProt
RGD		 PMID:10513816 GO_REF:0000024 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Uqcc3 ubiquinol-cytochrome c reductase complex assembly factor 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:205,773,591...205,774,369
Ensembl chr 1:205,772,780...205,774,376 		JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in ISO
IBA		 (PMID:16179339), (PMID:24870241)
GO_REF:0000033		 RGD
GO_Central		 PMID:16179339 PMID:24870241 GO_REF:0000033 NCBI chr 5:134,125,022...134,154,155
Ensembl chr 5:134,125,025...134,154,180 		JBrowse link
G Ctps2 CTP synthase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:31,645,873...31,786,733
Ensembl chr  X:31,645,873...31,786,733 		JBrowse link
G Decr2 2,4-dienoyl-CoA reductase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,104,907...15,113,281
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G ENSRNOG00000062879 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr  X:36,618,074...36,618,881 JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in IDA
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:1316151 GO_REF:0000002, RGD:729254 NCBI chr10:78,898,097...78,903,514
Ensembl chr10:78,897,770...78,903,538 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:13,917,309...13,918,415
Ensembl chr10:13,917,403...13,918,359 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,114,624...15,118,479
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:26,163,558...26,180,742
Ensembl chr18:26,163,555...26,180,794 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:109,832,085...109,839,301
Ensembl chr 8:109,832,589...109,839,301 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765 		JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,002,650...15,086,382
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uck1 uridine-cytidine kinase 1 involved_in ISO
IEA		 (PMID:11306702)
GO_REF:0000041		 RGD
UniProt		 PMID:11306702 GO_REF:0000041 NCBI chr 3:15,538,580...15,544,465
Ensembl chr 3:15,538,591...15,544,465 		JBrowse link
G Uck2 uridine-cytidine kinase 2 involved_in IEA
ISO
ISS		 GO_REF:0000041
(PMID:11306702)
GO_REF:0000024		 UniProt
RGD		 PMID:11306702 GO_REF:0000024 GO_REF:0000041 NCBI chr13:79,380,807...79,438,121
Ensembl chr13:79,383,846...79,438,352 		JBrowse link
G Uckl1 uridine-cytidine kinase 1-like 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:168,674,849...168,687,513
Ensembl chr 3:168,674,849...168,698,091 		JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:12163459)		 Ensembl
RGD		 PMID:12163459 GO_REF:0000107 NCBI chr15:2,863,241...3,246,453
Ensembl chr15:2,863,244...3,246,510 		JBrowse link
dTTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183 		JBrowse link
G Dtymk deoxythymidylate kinase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:220041 GO_REF:0000033, RGD:5133687 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870 		JBrowse link
G Tbpl1 TATA-box binding protein like 1 acts_upstream_of_or_within ISO MGI:2182539 (PMID:11861477) RGD PMID:11861477 NCBI chr 1:22,777,892...22,803,305
Ensembl chr 1:22,778,459...22,803,122
Ensembl chr 1:22,778,459...22,803,122 		JBrowse link
G Tyms thymidylate synthetase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536 		JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Decr2 2,4-dienoyl-CoA reductase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,104,907...15,113,281
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G ENSRNOG00000062879 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr  X:36,618,074...36,618,881 JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:57,801,842...57,817,434
Ensembl chr 4:57,801,831...57,819,076 		JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:7903306)		 UniProt
GO_Central
Ensembl
RGD		 PMID:7903306 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:109,256,705...109,261,365
Ensembl chr 8:109,256,728...109,261,359 		JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 involved_in IDA
IEA		 nucleoside diphosphate phosphorylation
GO_REF:0000002		 InterPro
RGD		 PMID:11139339 GO_REF:0000002, RGD:70281 NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in IDA
IEA		 nucleoside diphosphate phosphorylation
GO_REF:0000002		 InterPro
RGD		 PMID:8142475 PMID:1316151 GO_REF:0000002, RGD:2299082, RGD:729254 NCBI chr10:78,898,097...78,903,514
Ensembl chr10:78,897,770...78,903,538 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:13,917,309...13,918,415
Ensembl chr10:13,917,403...13,918,359 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,114,624...15,118,479
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:26,163,558...26,180,742
Ensembl chr18:26,163,555...26,180,794 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:109,832,085...109,839,301
Ensembl chr 8:109,832,589...109,839,301 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765 		JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,002,650...15,086,382
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IMP RGD PMID:21325440 RGD:9685453 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317 		JBrowse link
G Mir675 microRNA 675 acts_upstream_of ISO (PMID:31574452) RGD PMID:31574452 NCBI chr 1:197,732,275...197,732,358
Ensembl chr 1:197,732,275...197,732,358 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO (PMID:24289924) RGD PMID:24289924 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (PMID:20165904) RGD PMID:20165904 NCBI chr 9:85,284,335...85,503,035
Ensembl chr 9:85,284,335...85,503,044 		JBrowse link
negative regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:144,738,950...144,742,668
Ensembl chr 5:144,738,950...144,742,668 		JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IMP RGD PMID:31172217 RGD:329403053 NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951 		JBrowse link
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479 		JBrowse link
G Eno1 enolase 1 involved_in ISO UniProtKB:Q01986 (PMID:15459207) RGD PMID:15459207 NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336 		JBrowse link
G Hnf1a HNF1 homeobox A IMP RGD PMID:20841353 RGD:150540305 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Il4 interleukin 4 involved_in ISO (MGI:6304699|PMID:29061364) RGD PMID:29061364 MGI:6304699 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in IMP
IGI		 PMID:15459207 CAFA PMID:15459207 PMID:15459207 RGD:12793039, RGD:12793039 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:22629444 RGD:7240532 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 IMP RGD PMID:26888427 RGD:11040458 NCBI chr 1:151,711,965...151,718,188
Ensembl chr 1:151,711,901...151,718,189 		JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (MGI:5306739|PMID:21080215) RGD PMID:21080215 MGI:5306739 NCBI chr 9:85,284,335...85,503,035
Ensembl chr 9:85,284,335...85,503,044 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO (PMID:31574452) RGD PMID:31574452 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IMP RGD PMID:24096089 RGD:10413842 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:24747689) RGD PMID:24747689 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:56,097,166...56,191,841
Ensembl chr 3:56,097,269...56,192,100 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 IMP RGD PMID:23590160 RGD:8694322 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase IMP RGD PMID:20348225 RGD:13432160 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001 		JBrowse link
G Tmsb4x thymosin beta 4, X-linked involved_in ISO (PMID:21106936) RGD PMID:21106936 NCBI chr  X:27,144,666...27,146,667
Ensembl chr  X:27,128,610...27,146,667 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5906931|PMID:28802038) RGD PMID:28802038 MGI:5906931 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
G Vcp valosin-containing protein involved_in ISO (PMID:23498975) RGD PMID:23498975 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
proton motive force-driven ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07025819.1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr16:48,628,407...48,628,892 JBrowse link
G AABR07036567.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr12:42,791,929...42,792,339 JBrowse link
G AC098622.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:204,055,499...204,077,329 JBrowse link
G AC105662.3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 6:98,696,037...98,697,181 JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr18:71,292,406...71,300,342
Ensembl chr18:71,292,374...71,300,794 		JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr17:68,423,927...68,446,169
Ensembl chr17:68,423,909...68,608,367 		JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in TAS
IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro
RGD		 PMID:9578578 GO_REF:0000002 GO_REF:0000033, RGD:724594 NCBI chr 7:9,560,604...9,565,919
Ensembl chr 7:9,560,608...9,565,929 		JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:163,259,072...163,261,974
Ensembl chr 3:163,260,476...163,261,450 		JBrowse link
G Atp5hl1 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d-like 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr16:48,628,349...48,628,948
Ensembl chr16:48,628,407...48,628,892 		JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:81,024,056...81,026,780
Ensembl chr10:81,023,925...81,027,124
Ensembl chr10:81,023,925...81,027,124 		JBrowse link
G Atp5mc1l2 ATP synthase membrane subunit c locus 1 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:66,654,187...66,654,763
Ensembl chr 6:66,654,294...66,654,692 		JBrowse link
G Atp5mc2 ATP synthase membrane subunit c locus 2 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 7:133,791,341...133,799,713
Ensembl chr 7:133,791,342...133,799,733 		JBrowse link
G Atp5mc2l1 ATP synthase membrane subunit c locus 2 like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:76,549,370...76,549,840
Ensembl chr 9:76,549,421...76,549,840 		JBrowse link
G Atp5mc2l2 ATP synthase membrane subunit c locus 2 like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:26,836,362...26,836,853
Ensembl chr 2:26,836,416...26,836,838 		JBrowse link
G Atp5mc3 ATP synthase membrane subunit c locus 3 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:58,810,535...58,813,185
Ensembl chr 3:58,810,535...58,814,279 		JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:1,319,868...1,320,996
Ensembl chr14:1,319,868...1,321,013 		JBrowse link
G Atp5mg ATP synthase membrane subunit G involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:45,225,680...45,233,630
Ensembl chr 8:45,225,686...45,233,559 		JBrowse link
G Atp5mgl3 ATP synthase membrane subunit G like 3 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 6:15,945,315...15,945,626
Ensembl chr 6:15,945,315...15,945,626 		JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 2:193,424,138...193,435,418
Ensembl chr 2:193,424,047...193,435,418 		JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr10:100,657,700...100,662,960
Ensembl chr10:100,657,708...100,663,479 		JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:23,881,594...23,889,581
Ensembl chr11:23,881,592...23,889,119 		JBrowse link
G Atp6v1a ATPase H+ transporting V1 subunit A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:56,561,444...56,614,694
Ensembl chr11:56,560,974...56,614,694 		JBrowse link
G ENSRNOG00000066253 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 5:145,787,991...145,788,671 JBrowse link
G LOC103693662 ATP synthase F(0) complex subunit C3, mitochondrial pseudogene involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:35,429,231...35,430,741
Ensembl chr15:35,430,321...35,430,686
Ensembl chr15:35,430,321...35,430,686 		JBrowse link
G Mt-atp6 mitochondrially encoded ATP synthase membrane subunit 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr MT:7,919...8,599
NCBI chr MT:7,919...8,599
NCBI chr MT:7,919...8,599
NCBI chr MT:7,919...8,599
NCBI chr MT:7,919...8,599
NCBI chr MT:7,919...8,599
Ensembl chr MT:7,919...8,599 		JBrowse link
G Taf3 TATA-box binding protein associated factor 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:68,455,389...68,608,367
Ensembl chr17:68,423,909...68,608,367 		JBrowse link
proton motive force-driven mitochondrial ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO
IEA		 (PMID:12110673)
GO_REF:0000107		 RGD
Ensembl		 PMID:12110673 GO_REF:0000107 NCBI chr18:71,292,406...71,300,342
Ensembl chr18:71,292,374...71,300,794 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO
IBA
IEA		 (PMID:12110673)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:12110673 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:515,454...521,858
Ensembl chr 7:515,460...567,273 		JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr17:68,423,927...68,446,169
Ensembl chr17:68,423,909...68,608,367 		JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in ISO
IEA		 (PMID:12110673)
GO_REF:0000107		 RGD
Ensembl		 PMID:12110673 GO_REF:0000107 NCBI chr 7:9,560,604...9,565,919
Ensembl chr 7:9,560,608...9,565,929 		JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in ISO
IBA		 (PMID:12110673)
GO_REF:0000033		 RGD
GO_Central		 PMID:12110673 GO_REF:0000033 NCBI chr 3:163,259,072...163,261,974
Ensembl chr 3:163,260,476...163,261,450 		JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr14:1,319,868...1,320,996
Ensembl chr14:1,319,868...1,321,013 		JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in ISO
IBA		 (PMID:12110673)
GO_REF:0000033		 RGD
GO_Central		 PMID:12110673 GO_REF:0000033 NCBI chr12:9,421,665...9,428,236
Ensembl chr12:9,421,579...9,428,236 		JBrowse link
G Atp5mg ATP synthase membrane subunit G involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr 8:45,225,680...45,233,630
Ensembl chr 8:45,225,686...45,233,559 		JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO
IEA		 (PMID:12110673)
GO_REF:0000107		 RGD
Ensembl		 PMID:12110673 GO_REF:0000107 NCBI chr 2:193,424,138...193,435,418
Ensembl chr 2:193,424,047...193,435,418 		JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr10:100,657,700...100,662,960
Ensembl chr10:100,657,708...100,663,479 		JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr11:23,881,594...23,889,581
Ensembl chr11:23,881,592...23,889,119 		JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in ISO
IBA
IEA		 (PMID:15850986)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:15850986 GO_REF:0000033 GO_REF:0000107 NCBI chr11:31,165,218...31,171,530
Ensembl chr11:31,165,217...31,171,592 		JBrowse link
G LOC100361879 ATP synthase subunit epsilon, mitochondrial-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:77,863,480...77,864,135
Ensembl chr14:77,863,571...77,863,729 		JBrowse link
G Mt-atp6 mitochondrially encoded ATP synthase membrane subunit 6 involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr MT:7,919...8,599
NCBI chr MT:7,919...8,599
NCBI chr MT:7,919...8,599
NCBI chr MT:7,919...8,599
NCBI chr MT:7,919...8,599
NCBI chr MT:7,919...8,599
Ensembl chr MT:7,919...8,599 		JBrowse link
G Mt-atp8 mitochondrially encoded ATP synthase membrane subunit 8 involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr MT:7,758...7,961
NCBI chr MT:7,758...7,961
NCBI chr MT:7,758...7,961
NCBI chr MT:7,758...7,961
NCBI chr MT:7,758...7,961
NCBI chr MT:7,758...7,961
Ensembl chr MT:7,758...7,961 		JBrowse link
G Sdha succinate dehydrogenase complex flavoprotein subunit A involved_in NAS PMID:30030361 ComplexPortal PMID:30030361 RGD:151356635 NCBI chr 1:28,935,965...28,960,936
Ensembl chr 1:28,940,164...28,961,535 		JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B involved_in NAS PMID:30030361 ComplexPortal PMID:30030361 RGD:151356635 NCBI chr 5:153,264,906...153,285,570
Ensembl chr 5:153,264,899...153,314,293 		JBrowse link
G Sdhc succinate dehydrogenase complex subunit C involved_in NAS PMID:30030361 ComplexPortal PMID:30030361 RGD:151356635 NCBI chr13:83,544,652...83,565,560
Ensembl chr13:83,544,652...83,566,253 		JBrowse link
G Sdhd succinate dehydrogenase complex subunit D involved_in NAS PMID:30030361 ComplexPortal PMID:30030361 RGD:151356635 NCBI chr 8:50,944,702...50,954,298
Ensembl chr 8:50,944,704...50,954,238 		JBrowse link
G Stoml2 stomatin like 2 involved_in ISO (MGI:5438519|PMID:23028053) RGD PMID:23028053 MGI:5438519 NCBI chr 5:57,256,227...57,259,824
Ensembl chr 5:57,256,220...57,259,920 		JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in ISO (MGI:5641585|PMID:25637806) RGD PMID:25637806 MGI:5641585 NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391 		JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antkmt adenine nucleotide translocase lysine methyltransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:14,812,274...14,814,798
Ensembl chr10:14,812,269...14,814,193 		JBrowse link
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in ISO
IBA
ISS		 (PMID:30530489)
GO_REF:0000033
(MGI:6277238|PMID:30530489)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:30530489 GO_REF:0000024 GO_REF:0000033 MGI:6277238 NCBI chr 2:82,603,086...82,618,325
Ensembl chr 2:82,603,009...82,618,308 		JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO (MGI:6245118|PMID:30318146) RGD PMID:30318146 MGI:6245118 NCBI chr12:21,628,319...21,629,398
Ensembl chr12:21,626,450...21,629,408 		JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:10659854 GO_REF:0000033, RGD:2303528 NCBI chr 6:25,292,133...25,315,078
Ensembl chr 6:25,292,133...25,319,861 		JBrowse link
G Decr2 2,4-dienoyl-CoA reductase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,104,907...15,113,281
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G ENSRNOG00000062879 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr  X:36,618,074...36,618,881 JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in IDA
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:1316151 GO_REF:0000002, RGD:729254 NCBI chr10:78,898,097...78,903,514
Ensembl chr10:78,897,770...78,903,538 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:13,917,309...13,918,415
Ensembl chr10:13,917,403...13,918,359 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,114,624...15,118,479
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:26,163,558...26,180,742
Ensembl chr18:26,163,555...26,180,794 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:109,832,085...109,839,301
Ensembl chr 8:109,832,589...109,839,301 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765 		JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,002,650...15,086,382
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12289
      biosynthetic process 8418
        organophosphate biosynthetic process 560
          nucleoside phosphate biosynthetic process 267
            nucleoside triphosphate biosynthetic process 97
              deoxyribonucleoside triphosphate biosynthetic process + 1
              purine nucleoside triphosphate biosynthetic process + 85
              pyrimidine nucleoside triphosphate biosynthetic process + 20
              ribonucleoside triphosphate biosynthetic process + 90
Path 2
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12289
      cellular metabolic process 10293
        phosphorus metabolic process 2742
          phosphate-containing compound metabolic process 2710
            nucleoside phosphate metabolic process 627
              nucleoside triphosphate metabolic process 300
                nucleoside triphosphate biosynthetic process 97
                  deoxyribonucleoside triphosphate biosynthetic process + 1
                  purine nucleoside triphosphate biosynthetic process + 85
                  pyrimidine nucleoside triphosphate biosynthetic process + 20
                  ribonucleoside triphosphate biosynthetic process + 90
paths to the root