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ONTOLOGY REPORT - ANNOTATIONS


Term:nucleoside diphosphate catabolic process
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Accession:GO:0009134 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a nucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: nucleoside diphosphate breakdown;   nucleoside diphosphate catabolism;   nucleoside diphosphate degradation


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nucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:2,617,795...2,623,818
Ensembl chr 3:2,617,805...2,623,445
JBrowse link
G Entpd3 ectonucleoside triphosphate diphosphohydrolase 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3043501|PMID:15130768)
RGD PMID:15130768, PMID:21873635 MGI:3043501, RGD:13792537 NCBI chr 8:129,201,000...129,232,436
Ensembl chr 8:129,201,669...129,232,677
JBrowse link
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:51,222,954...51,250,787
Ensembl chr15:51,222,954...51,250,787
JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:108,087,677...108,123,811
Ensembl chr 6:108,087,418...108,120,579
JBrowse link
G Entpd6 ectonucleoside triphosphate diphosphohydrolase 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:146,546,424...146,568,828
Ensembl chr 3:146,546,387...146,568,825
JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:263,448,633...263,490,308
Ensembl chr 1:263,448,633...263,490,308
Ensembl chr 1:263,448,633...263,490,308
JBrowse link
G Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:2,286,363...2,299,720
Ensembl chr 3:2,288,667...2,302,782
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) RGD PMID:28746349 MGI:5917829 NCBI chr 1:175,585,301...175,630,479
Ensembl chr 1:175,586,097...175,630,467
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO MGI:2182811 (MGI:3760051|PMID:17502665) RGD PMID:17502665 MGI:3760051 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Nt5e 5' nucleotidase, ecto involved_in IEA
ISO
GO_REF:0000107
MGI:3522017 (MGI:5917829|PMID:28746349), (MGI:6478084|PMID:20430891)
Ensembl
RGD
PMID:20430891 PMID:28746349 GO_REF:0000107 MGI:5917829 MGI:6478084 NCBI chr 8:95,969,002...96,012,733
Ensembl chr 8:95,968,652...96,012,696
JBrowse link
G Nudt9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) RGD PMID:11825615 MGI:2158549 NCBI chr14:7,036,809...7,054,739
Ensembl chr14:7,036,820...7,054,548
JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) RGD PMID:10858452 NCBI chr15:51,222,954...51,250,787
Ensembl chr15:51,222,954...51,250,787
JBrowse link
G Nudt18 nudix hydrolase 18 involved_in ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix hydrolase 16 involved_in ISO (PMID:20385596) RGD PMID:20385596 NCBI chr 8:113,673,069...113,675,124
Ensembl chr 8:113,672,758...113,675,128
JBrowse link
G Nudt9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) RGD PMID:11825615 MGI:2158549 NCBI chr14:7,036,809...7,054,739
Ensembl chr14:7,036,820...7,054,548
JBrowse link
purine ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 acts_upstream_of_or_within ISO (MGI:2178511|PMID:11929769) RGD PMID:11929769 MGI:2178511 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2178511|PMID:11929769)
Ensembl
RGD
PMID:11929769 GO_REF:0000107 MGI:2178511 NCBI chr 3:2,617,795...2,623,818
Ensembl chr 3:2,617,805...2,623,445
JBrowse link
ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt5 nudix hydrolase 5 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18462755), (PMID:19699693), (PMID:21389046)
UniProt
Ensembl
RGD
PMID:18462755 PMID:19699693 PMID:21389046 GO_REF:0000024 GO_REF:0000107 NCBI chr17:76,387,027...76,410,309
Ensembl chr17:76,387,031...76,410,294
JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IBA
ISO
PMID:21873635
(PMID:10858452), (PMID:9556635)
RGD PMID:9556635 PMID:10858452, PMID:21873635 RGD:13792537 NCBI chr15:51,222,954...51,250,787
Ensembl chr15:51,222,954...51,250,787
JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:263,448,633...263,490,308
Ensembl chr 1:263,448,633...263,490,308
Ensembl chr 1:263,448,633...263,490,308
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    metabolic process 11797
      small molecule metabolic process 1790
        nucleobase-containing small molecule metabolic process 577
          nucleoside phosphate metabolic process 510
            nucleoside diphosphate metabolic process 165
              nucleoside diphosphate catabolic process 14
                deoxyribonucleoside diphosphate catabolic process + 1
                purine nucleoside diphosphate catabolic process + 8
                pyrimidine nucleoside diphosphate catabolic process + 2
                ribonucleoside diphosphate catabolic process + 10
Path 2
Term Annotations click to browse term
  biological_process 19491
    metabolic process 11797
      cellular metabolic process 10755
        cellular nitrogen compound metabolic process 6601
          nucleobase-containing compound metabolic process 5420
            nucleobase-containing small molecule metabolic process 577
              nucleoside phosphate metabolic process 510
                nucleoside phosphate catabolic process 78
                  nucleoside diphosphate catabolic process 14
                    deoxyribonucleoside diphosphate catabolic process + 1
                    purine nucleoside diphosphate catabolic process + 8
                    pyrimidine nucleoside diphosphate catabolic process + 2
                    ribonucleoside diphosphate catabolic process + 10
paths to the root