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ONTOLOGY REPORT - ANNOTATIONS


Term:purine nucleoside monophosphate biosynthetic process
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Accession:GO:0009127 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of purine nucleoside monophosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.
Synonyms:exact_synonym: purine nucleoside monophosphate anabolism;   purine nucleoside monophosphate biosynthesis;   purine nucleoside monophosphate formation;   purine nucleoside monophosphate synthesis


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'de novo' AMP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 7:122,157,201...122,192,328
Ensembl chr 7:122,157,201...122,192,328
JBrowse link
G Adss adenylosuccinate synthase IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr13:95,913,426...95,943,761
Ensembl chr13:95,913,426...95,943,761
JBrowse link
G Adssl1 adenylosuccinate synthase like 1 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 6:137,184,818...137,206,694
Ensembl chr 6:137,184,820...137,206,693
JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07036855.1 IEA GO_REF:0000041 UniProt GO_REF:0000041 Ensembl chr  X:4,285,857...4,287,160 JBrowse link
G Adsl adenylosuccinate lyase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:122,157,201...122,192,328
Ensembl chr 7:122,157,201...122,192,328
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IDA
IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:9332377, PMID:21873635 GO_REF:0000041, RGD:70804, RGD:13792537 NCBI chr 9:78,862,013...78,882,061
Ensembl chr 9:78,862,013...78,882,060
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr11:31,780,477...31,805,728
Ensembl chr11:31,780,487...31,805,728
JBrowse link
G LOC100910308 multifunctional protein ADE2-like IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:33,968,258...33,977,367
Ensembl chr14:33,968,759...33,977,277
JBrowse link
G Paics phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:33,563,884...33,580,944
Ensembl chr14:33,563,886...33,580,566
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:55,571,881...55,593,384
Ensembl chr10:55,571,118...55,589,978
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:33,580,541...33,614,919
Ensembl chr14:33,580,541...33,614,919
JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034673.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:83,483,172...83,483,513 JBrowse link
G Adsl adenylosuccinate lyase IDA
ISO
(PMID:11428554) RGD PMID:11428554, PMID:3759987 RGD:5135303 NCBI chr 7:122,157,201...122,192,328
Ensembl chr 7:122,157,201...122,192,328
JBrowse link
G Adss adenylosuccinate synthase ISO (MGI:MGI:64874|PMID:8308018)
(PMID:2004783)
RGD PMID:2004783, PMID:8308018 MGI:MGI:64874 NCBI chr13:95,913,426...95,943,761
Ensembl chr13:95,913,426...95,943,761
JBrowse link
G Adssl1 adenylosuccinate synthase like 1 ISO (PMID:15786719) RGD PMID:15786719 NCBI chr 6:137,184,818...137,206,694
Ensembl chr 6:137,184,820...137,206,693
JBrowse link
G LOC100910067 bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Nudt2 nudix hydrolase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:57,845,819...57,860,658
Ensembl chr 5:57,845,819...57,860,658
JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 IDA RGD PMID:2546925 RGD:5134985 NCBI chr  X:111,798,233...111,820,270
Ensembl chr  X:111,798,233...111,820,266
JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 IDA RGD PMID:2546925 RGD:5134985 NCBI chr  X:28,435,275...28,472,882
Ensembl chr  X:28,435,507...28,472,880
JBrowse link
AMP salvage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr15:3,033,535...3,435,888
Ensembl chr15:3,033,495...3,435,888
JBrowse link
G Aprt adenine phosphoribosyl transferase IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr19:55,387,288...55,389,256
Ensembl chr19:55,387,288...55,389,256
JBrowse link
dAMP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dck deoxycytidine kinase IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:20,935,442...20,952,939
Ensembl chr14:20,935,369...20,953,095
JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gmps guanine monophosphate synthase IDA
ISO
IBA
IEA
(PMID:8089153)
PMID:21873635
GO_REF:0000104
GO_REF:0000002
GO_REF:0000041
RGD
UniProt
InterPro
PMID:8089153, PMID:3436958, PMID:21873635 GO_REF:0000002, GO_REF:0000041, GO_REF:0000104, RGD:1599004, RGD:13792537 NCBI chr 2:154,555,967...154,590,662
Ensembl chr 2:154,555,871...154,590,662
JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 4:56,478,383...56,493,987
Ensembl chr 4:56,478,384...56,493,923
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:117,346,983...117,351,619
Ensembl chr 8:117,347,029...117,351,610
JBrowse link
GMP salvage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hprt1 hypoxanthine phosphoribosyltransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:158,196,640...158,228,815
Ensembl chr  X:158,197,149...158,228,749
JBrowse link
G LOC103689983 hypoxanthine-guanine phosphoribosyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:158,623,231...158,655,277
Ensembl chr  X:158,623,240...158,655,198
JBrowse link
IMP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd1 adenosine monophosphate deaminase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:205,568,934...205,589,961
Ensembl chr 2:205,568,935...205,590,021
JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 ISO
IBA
SGD:S000004498 (PMID:23911318)
PMID:21873635
MGI:MGI:5490144 (MGI:MGI:5506958|PMID:23911318)
RGD PMID:23911318, PMID:21873635 MGI:MGI:5506958, RGD:13792537 NCBI chr 2:210,861,624...210,874,348
Ensembl chr 2:210,861,625...210,874,304
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 ISO
IBA
MGI:MGI:5529271 (MGI:MGI:5506958|PMID:23911318), (MGI:MGI:5512796|PMID:23542464), (MGI:MGI:5529149|PMID:23078545), (MGI:MGI:87193|PMID:9133604)
PMID:21873635
RGD PMID:9133604, PMID:23078545, PMID:23542464, PMID:23911318, PMID:21873635 MGI:MGI:5506958, MGI:MGI:5512796, MGI:MGI:5529149, MGI:MGI:87193, RGD:13792537 NCBI chr 1:175,585,301...175,630,479
Ensembl chr 1:175,586,097...175,630,467
JBrowse link
IMP salvage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd1 adenosine monophosphate deaminase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:205,568,934...205,589,961
Ensembl chr 2:205,568,935...205,590,021
JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:210,861,624...210,874,348
Ensembl chr 2:210,861,625...210,874,304
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:175,585,301...175,630,479
Ensembl chr 1:175,586,097...175,630,467
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr  X:158,196,640...158,228,815
Ensembl chr  X:158,197,149...158,228,749
JBrowse link
G LOC103689983 hypoxanthine-guanine phosphoribosyltransferase IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr  X:158,623,231...158,655,277
Ensembl chr  X:158,623,240...158,655,198
JBrowse link
G Prtfdc1 phosphoribosyl transferase domain containing 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:87,926,242...88,037,040
Ensembl chr17:87,927,058...88,037,040
JBrowse link
purine ribonucleoside monophosphate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Adssl1 adenylosuccinate synthase like 1 IDA RGD PMID:3759987 RGD:5135303 NCBI chr 6:137,184,818...137,206,694
Ensembl chr 6:137,184,820...137,206,693
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IDA RGD PMID:8463258 RGD:633710 NCBI chr14:33,580,541...33,614,919
Ensembl chr14:33,580,541...33,614,919
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      organic substance metabolic process 11651
        organophosphate metabolic process 941
          nucleoside phosphate metabolic process 511
            nucleoside monophosphate metabolic process 73
              nucleoside monophosphate biosynthetic process 50
                purine nucleoside monophosphate biosynthetic process 28
                  purine deoxyribonucleoside monophosphate biosynthetic process + 1
                  purine ribonucleoside monophosphate biosynthetic process + 27
Path 2
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      cellular metabolic process 11085
        cellular aromatic compound metabolic process 5715
          nucleobase-containing compound metabolic process 5489
            nucleobase-containing small molecule metabolic process 591
              nucleoside phosphate metabolic process 511
                nucleoside monophosphate metabolic process 73
                  nucleoside monophosphate biosynthetic process 50
                    purine nucleoside monophosphate biosynthetic process 28
                      purine deoxyribonucleoside monophosphate biosynthetic process + 1
                      purine ribonucleoside monophosphate biosynthetic process + 27
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.