Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:nucleobase metabolic process
go back to main search page
Accession:GO:0009112 term browser browse the term
Definition:The chemical reactions and pathways involving a nucleobase, a nitrogenous base that is a constituent of a nucleic acid, e.g. the purines: adenine, guanine, hypoxanthine, xanthine and the pyrimidines: cytosine, uracil, thymine.
Synonyms:exact_synonym: nucleobase metabolism


show annotations for term's descendants           Sort by:
'de novo' pyrimidine nucleobase biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IBA
IEA
ISS
IDA		 (PMID:24332717) RGD
GO_Central
Ensembl
InterPro
BHF-UCL
UniProt		 PMID:1476792 PMID:24332717 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 RGD:5132591 NCBI chr 2:27,217,369...27,243,943
Ensembl chr 2:27,217,369...27,243,943 		JBrowse link
G CMPK1 cytidine/uridine monophosphate kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,790...47,394,866 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:210,477,685...210,679,107
Ensembl chr 2:210,477,682...210,679,107 		JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) involved_in ISO
IBA
IEA		 RGD
GO_Central
InterPro		 PMID:1476792 GO_REF:0000002 GO_REF:0000033 RGD:5132591 NCBI chr16:72,008,744...72,027,659
Ensembl chr16:72,008,588...72,027,664 		JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556 		JBrowse link
G UMPS uridine monophosphate synthetase involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:124,730,452...124,749,273
Ensembl chr 3:124,730,433...124,749,273 		JBrowse link
adenine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:33,503,931...33,542,893
Ensembl chr21:33,503,931...33,543,491 		JBrowse link
adenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APRT adenine phosphoribosyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8643571), (PMID:8894695)
(PMID:8894695)		 Ensembl
MGI		 PMID:8643571 PMID:8894695 GO_REF:0000107 NCBI chr16:88,809,339...88,811,928
Ensembl chr16:88,809,339...88,811,937 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8894695) Ensembl
MGI		 PMID:8894695 GO_REF:0000107 NCBI chr  X:134,460,165...134,500,668
Ensembl chr  X:134,460,165...134,520,513 		JBrowse link
adenine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APRT adenine phosphoribosyltransferase involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr16:88,809,339...88,811,928
Ensembl chr16:88,809,339...88,811,937 		JBrowse link
cytosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDA cytidine deaminase involved_in TAS (PMID:7923172) UniProt PMID:7923172 NCBI chr 1:20,589,097...20,618,903
Ensembl chr 1:20,589,086...20,618,903 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15284227) Ensembl
MGI		 PMID:15284227 GO_REF:0000107 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680 		JBrowse link
G TET2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO (PMID:21803851) MGI PMID:21803851 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816 		JBrowse link
GMP catabolic process to guanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:5560407) MGI PMID:5560407 NCBI chr10:103,088,017...103,193,272
Ensembl chr10:103,087,185...103,277,605 		JBrowse link
guanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr 9:72,114,608...72,259,869
Ensembl chr 9:72,114,595...72,257,193 		JBrowse link
G UOX urate oxidase (pseudogene) involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr 1:84,364,958...84,384,801
Ensembl chr 1:84,365,428...84,397,831 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr13:27,977,717...27,988,693
Ensembl chr13:27,977,717...27,988,693 		JBrowse link
G URAHP urate (hydroxyiso-) hydrolase, pseudogene involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr16:90,039,761...90,047,783
Ensembl chr16:90,043,914...90,047,597
Ensembl chr16:90,043,914...90,047,597 		JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,334,321...31,414,742
Ensembl chr 2:31,334,321...31,414,742 		JBrowse link
guanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:72,114,608...72,259,869
Ensembl chr 9:72,114,595...72,257,193 		JBrowse link
G KDM1A lysine demethylase 1A involved_in ISO
IEA		 RGD
Ensembl		 PMID:20418916 GO_REF:0000107 RGD:9588315 NCBI chr 1:23,019,468...23,083,689
Ensembl chr 1:23,019,443...23,083,689 		JBrowse link
guanine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in IDA
IBA		 (PMID:19527031) UniProt
GO_Central		 PMID:19527031 GO_REF:0000033 NCBI chr  X:134,460,165...134,500,668
Ensembl chr  X:134,460,165...134,520,513 		JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 NOT|involved_in IDA (PMID:21054786) UniProt PMID:21054786 NCBI chr10:24,848,614...24,952,606
Ensembl chr10:24,848,614...24,952,606 		JBrowse link
hypoxanthine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10720488) Ensembl
MGI		 PMID:10720488 GO_REF:0000107 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252 		JBrowse link
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 involved_in IMP (PMID:17701896) UniProt PMID:17701896 NCBI chr  X:107,628,510...107,651,026
Ensembl chr  X:107,628,428...107,651,993 		JBrowse link
hypoxanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UOX urate oxidase (pseudogene) involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr 1:84,364,958...84,384,801
Ensembl chr 1:84,365,428...84,397,831 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr13:27,977,717...27,988,693
Ensembl chr13:27,977,717...27,988,693 		JBrowse link
G URAHP urate (hydroxyiso-) hydrolase, pseudogene involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr16:90,039,761...90,047,783
Ensembl chr16:90,043,914...90,047,597
Ensembl chr16:90,043,914...90,047,597 		JBrowse link
G XDH xanthine dehydrogenase involved_in ISO
IEA
IDA		 (PMID:1619276) RGD
Ensembl
MGI		 PMID:232638 PMID:1619276 GO_REF:0000107 RGD:13210503 NCBI chr 2:31,334,321...31,414,742
Ensembl chr 2:31,334,321...31,414,742 		JBrowse link
hypoxanthine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IMP
IEA		 (PMID:10037486)
(PMID:3029599)
(PMID:9824441)		 RGD
MGI
GO_Central
UniProt
Ensembl		 PMID:3029599 PMID:6206848 PMID:9824441 PMID:10037486 GO_REF:0000033 GO_REF:0000107 RGD:1580844 NCBI chr  X:134,460,165...134,500,668
Ensembl chr  X:134,460,165...134,520,513 		JBrowse link
hypoxanthine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in IDA (PMID:19527031) UniProt PMID:19527031 NCBI chr  X:134,460,165...134,500,668
Ensembl chr  X:134,460,165...134,520,513 		JBrowse link
purine nucleobase biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr21:33,503,931...33,542,893
Ensembl chr21:33,503,931...33,543,491 		JBrowse link
G GMPS guanine monophosphate synthase involved_in TAS (PMID:8089153) PINC PMID:8089153 NCBI chr 3:155,869,430...155,944,020
Ensembl chr 3:155,870,650...155,944,020 		JBrowse link
G PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in TAS
IDA		 (PMID:2253271)
(PMID:31600779)		 PINC
UniProt		 PMID:2253271 PMID:31600779 NCBI chr 4:56,410,507...56,464,578
Ensembl chr 4:56,435,741...56,464,578 		JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:56,393,362...56,435,615
Ensembl chr 4:56,393,362...56,435,615 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in IDA (PMID:11516159) UniProt PMID:11516159 NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,873...18,363,550 		JBrowse link
purine nucleobase catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IMP (PMID:11988088) UniProt PMID:11988088 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000 		JBrowse link
purine nucleobase metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP3 acid phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:132,317,407...132,368,302
Ensembl chr 3:132,317,369...132,368,302 		JBrowse link
G ADK adenosine kinase involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:74,151,221...74,709,290
Ensembl chr10:74,151,202...74,709,963 		JBrowse link
G GMPR guanosine monophosphate reductase involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:16,238,587...16,295,549
Ensembl chr 6:16,238,587...16,295,549 		JBrowse link
G GMPR2 guanosine monophosphate reductase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:24,232,622...24,239,242
Ensembl chr14:24,232,422...24,239,242 		JBrowse link
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 involved_in IMP (PMID:8253776) UniProt PMID:8253776 NCBI chr  X:107,628,510...107,651,026
Ensembl chr  X:107,628,428...107,651,993 		JBrowse link
G TTR transthyretin involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:31,591,877...31,598,821
Ensembl chr18:31,557,009...31,598,833 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA UniProt GO_REF:0000043 NCBI chr13:27,977,717...27,988,693
Ensembl chr13:27,977,717...27,988,693 		JBrowse link
pyrimidine nucleobase biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:40,979,696...41,012,565
Ensembl chr 1:40,979,300...41,012,565 		JBrowse link
G CTPS2 CTP synthase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:16,587,999...16,712,910
Ensembl chr  X:16,587,999...16,712,936 		JBrowse link
G UMPS uridine monophosphate synthetase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:124,730,452...124,749,273
Ensembl chr 3:124,730,433...124,749,273 		JBrowse link
pyrimidine nucleobase catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRMP1 collapsin response mediator protein 1 NOT|involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:5,820,764...5,893,086
Ensembl chr 4:5,748,084...5,893,086 		JBrowse link
G DPYD dihydropyrimidine dehydrogenase acts_upstream_of_or_within
involved_in		 ISO
IEA
ISS
IMP		 (PMID:12651209)
(PMID:11988088)		 RGD
MGI
Ensembl
UniProt		 PMID:1629785 PMID:11988088 PMID:12651209 GO_REF:0000024 GO_REF:0000107 RGD:1599794 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000 		JBrowse link
G DPYS dihydropyrimidinase involved_in IDA
IBA		 (PMID:9718352) UniProt
GO_Central		 PMID:9718352 GO_REF:0000033 NCBI chr 8:104,379,431...104,467,055
Ensembl chr 8:104,330,324...104,467,055 		JBrowse link
G DPYSL2 dihydropyrimidinase like 2 NOT|involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:26,514,031...26,658,175
Ensembl chr 8:26,514,031...26,658,178 		JBrowse link
G DPYSL3 dihydropyrimidinase like 3 NOT|involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:147,390,808...147,510,068
Ensembl chr 5:147,390,808...147,510,068 		JBrowse link
G DPYSL4 dihydropyrimidinase like 4 NOT|involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:132,186,948...132,205,759
Ensembl chr10:132,186,948...132,205,759 		JBrowse link
G DPYSL5 dihydropyrimidinase like 5 NOT|involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:26,847,995...26,950,351
Ensembl chr 2:26,847,747...26,950,351 		JBrowse link
pyrimidine nucleobase metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in ISO
IEA		 orotic acid RGD
Ensembl		 PMID:10204803 GO_REF:0000107 RGD:5133695 NCBI chr11:4,094,685...4,138,932
Ensembl chr11:4,094,707...4,138,932 		JBrowse link
G RRM2 ribonucleotide reductase regulatory subunit M2 ISO orotic acid RGD PMID:10204803 RGD:5133695 NCBI chr 2:10,122,568...10,211,010
Ensembl chr 2:10,120,698...10,211,725 		JBrowse link
G TYMP thymidine phosphorylase involved_in IEA InterPro GO_REF:0000002 NCBI chr22:50,525,752...50,530,085
Ensembl chr22:50,525,752...50,530,032 		JBrowse link
G TYMS thymidylate synthetase involved_in ISO
IEA		 5-fluorocytosine RGD
Ensembl		 PMID:9524100 GO_REF:0000107 RGD:5133447 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578 		JBrowse link
thymine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 involved_in ISO
IBA
IMP		 (PMID:23835272) RGD
GO_Central
BHF-UCL		 PMID:2768248 PMID:23835272 GO_REF:0000033 RGD:1599052 NCBI chr14:74,056,847...74,084,453
Ensembl chr14:74,056,847...74,084,492 		JBrowse link
G DPYD dihydropyrimidine dehydrogenase involved_in IDA
IBA		 (PMID:10410956) UniProt
GO_Central		 PMID:10410956 GO_REF:0000033 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000 		JBrowse link
G DPYS dihydropyrimidinase involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:104,379,431...104,467,055
Ensembl chr 8:104,330,324...104,467,055 		JBrowse link
thymine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:74,056,847...74,084,453
Ensembl chr14:74,056,847...74,084,492 		JBrowse link
uracil catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IDA
IBA		 (PMID:1512248), (PMID:18075467) UniProt
GO_Central		 PMID:1512248 PMID:18075467 GO_REF:0000033 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000 		JBrowse link
G DPYS dihydropyrimidinase involved_in IMP
IDA		 (PMID:18075467)
(PMID:10410956)		 UniProt PMID:10410956 PMID:18075467 NCBI chr 8:104,379,431...104,467,055
Ensembl chr 8:104,330,324...104,467,055 		JBrowse link
uracil metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase ISO RGD PMID:7626590 RGD:1624989 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000 		JBrowse link
G DPYS dihydropyrimidinase ISO RGD PMID:7626590 PMID:8307005 RGD:1624989 RGD:1624990 NCBI chr 8:104,379,431...104,467,055
Ensembl chr 8:104,330,324...104,467,055 		JBrowse link
G TYMS thymidylate synthetase involved_in ISO
IEA		 RGD
Ensembl		 PMID:2043679 GO_REF:0000107 RGD:5133426 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578 		JBrowse link
xanthine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10720488) Ensembl
MGI		 PMID:10720488 GO_REF:0000107 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252 		JBrowse link
xanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UOX urate oxidase (pseudogene) involved_in ISO (PMID:4207016) MGI PMID:4207016 NCBI chr 1:84,364,958...84,384,801
Ensembl chr 1:84,365,428...84,397,831 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr13:27,977,717...27,988,693
Ensembl chr13:27,977,717...27,988,693 		JBrowse link
G URAHP urate (hydroxyiso-) hydrolase, pseudogene involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr16:90,039,761...90,047,783
Ensembl chr16:90,043,914...90,047,597
Ensembl chr16:90,043,914...90,047,597 		JBrowse link
G XDH xanthine dehydrogenase involved_in IDA
IBA
IEA		 (PMID:17301077), (PMID:8670112) UniProt
GO_Central
Ensembl		 PMID:8670112 PMID:17301077 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:31,334,321...31,414,742
Ensembl chr 2:31,334,321...31,414,742 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19711
    cellular process 18963
      metabolic process 12918
        small molecule metabolic process 1998
          nucleobase-containing small molecule metabolic process 755
            nucleobase metabolic process 45
              nucleobase biosynthetic process + 18
              nucleobase catabolic process + 13
              purine nucleobase metabolic process + 23
              pyrimidine nucleobase metabolic process + 23
Path 2
Term Annotations click to browse term
  biological_process 19711
    cellular process 18963
      metabolic process 12918
        primary metabolic process 11235
          nucleobase-containing compound metabolic process 6782
            nucleobase-containing small molecule metabolic process 755
              nucleobase metabolic process 45
                nucleobase biosynthetic process + 18
                nucleobase catabolic process + 13
                purine nucleobase metabolic process + 23
                pyrimidine nucleobase metabolic process + 23
paths to the root