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ONTOLOGY REPORT - ANNOTATIONS


Term:aromatic amino acid family biosynthetic process, prephenate pathway
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Accession:GO:0009095 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of phenylalanine and tyrosine from other compounds, including chorismate, via the intermediate prephenate.
Synonyms:exact_synonym: aromatic amino acid family anabolism, prephenate pathway;   aromatic amino acid family biosynthetic process via prephenate;   aromatic amino acid family biosynthetic process via prephenate(2-);   aromatic amino acid family formation, prephenate pathway;   aromatic amino acid family synthesis, prephenate pathway



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tyrosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pah phenylalanine hydroxylase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16953590 PMID:21873635 RGD:1601531, RGD:13792537 NCBI chr 7:21,933,179...21,998,134
Ensembl chr 7:21,933,179...21,998,130
JBrowse link
tyrosine biosynthetic process, by oxidation of phenylalanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pah phenylalanine hydroxylase acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
MGI:1857271 (MGI:58807|PMID:2308957)
GO_REF:0000108
RGD
GOC
PMID:2308957 PMID:10839989 GO_REF:0000108 MGI:58807, RGD:1601535 NCBI chr 7:21,933,179...21,998,134
Ensembl chr 7:21,933,179...21,998,130
JBrowse link
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 acts_upstream_of_or_within ISO (MGI:3525018|PMID:15182178) RGD PMID:15182178 MGI:3525018 NCBI chr20:29,037,545...29,044,322
Ensembl chr20:28,953,864...29,044,292
Ensembl chr20:28,953,864...29,044,292
JBrowse link
G Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:3525018|PMID:15182178)
GOC
RGD
PMID:15182178 GO_REF:0000108 MGI:3525018 NCBI chr17:8,845,161...8,896,343
Ensembl chr17:8,845,084...8,910,539
JBrowse link
G Txndc15 thioredoxin domain containing 15 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:8,898,074...8,910,538
Ensembl chr17:8,845,084...8,910,539
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20091
    cellular process 18676
      cellular metabolic process 10396
        cellular biosynthetic process 6140
          organic acid biosynthetic process 315
            aromatic amino acid family biosynthetic process 5
              aromatic amino acid family biosynthetic process, prephenate pathway 4
                L-phenylalanine biosynthetic process + 0
                tyrosine biosynthetic process + 4
Path 2
Term Annotations click to browse term
  biological_process 20091
    cellular process 18676
      cellular metabolic process 10396
        organic acid metabolic process 1045
          oxoacid metabolic process 1030
            carboxylic acid metabolic process 1015
              amino acid metabolic process 290
                aromatic amino acid metabolic process 33
                  aromatic amino acid family biosynthetic process 5
                    aromatic amino acid family biosynthetic process, prephenate pathway 4
                      L-phenylalanine biosynthetic process + 0
                      tyrosine biosynthetic process + 4
paths to the root