Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:glutamine family amino acid biosynthetic process
go back to main search page
Accession:GO:0009084 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.
Synonyms:exact_synonym: glutamine family amino acid anabolism;   glutamine family amino acid biosynthesis;   glutamine family amino acid formation;   glutamine family amino acid synthesis



show annotations for term's descendants           Sort by:
 
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 5:130,011,258...130,024,381
Ensembl chr 5:130,011,258...130,029,247
JBrowse link
G Ass1 argininosuccinate synthetase 1 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
RGD
GO_Central
PMID:12470967 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:4834177 MGI:6201960 RGD:631755 NCBI chr 2:31,470,270...31,520,670
Ensembl chr 2:31,470,207...31,520,672
JBrowse link
G Nags N-acetylglutamate synthase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:102,145,513...102,149,528
Ensembl chr11:102,145,513...102,149,477
JBrowse link
G Otc ornithine transcarbamylase acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr  X:10,252,230...10,321,024
Ensembl chr  X:10,252,305...10,321,024
JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:130,011,258...130,024,381
Ensembl chr 5:130,011,258...130,029,247
JBrowse link
G Otc ornithine transcarbamylase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:10,252,230...10,321,024
Ensembl chr  X:10,252,305...10,321,024
JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in IDA
IBA
ISO
(MGI:5320252|PMID:22228304)
(MGI:6201960|PMID:21873635)
UniProt
GO_Central
MGI
PMID:21873635 PMID:22228304 GO_REF:0000096 MGI:4834177 MGI:5320252 MGI:6201960 NCBI chr 1:52,163,449...52,235,009
Ensembl chr 1:52,163,448...52,233,232
JBrowse link
G Gls2 glutaminase 2 (liver, mitochondrial) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:128,194,635...128,210,004
Ensembl chr10:128,194,457...128,210,004
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr14:34,310,727...34,345,033
Ensembl chr14:34,310,727...34,345,265
JBrowse link
G Slc25a12 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr 2:71,274,270...71,367,781
Ensembl chr 2:71,271,063...71,367,749
JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase (glutamine synthetase) involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
RGD
PMID:28323 PMID:4403443 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:2301547 RGD:2301548 NCBI chr 1:153,899,929...153,909,723
Ensembl chr 1:153,899,944...153,909,723
JBrowse link
G Lgsn lengsin, lens protein with glutamine synthetase domain NOT|involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:31,176,281...31,204,725
Ensembl chr 1:31,176,401...31,204,725
JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Noxred1 NADP+ dependent oxidoreductase domain containing 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr12:87,221,123...87,238,601
Ensembl chr12:87,221,040...87,238,732
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:120,638,998...120,643,748
Ensembl chr11:120,635,712...120,643,769
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase family, member 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:180,904,274...180,908,088
Ensembl chr 1:180,904,293...180,908,088
JBrowse link
G Pycrl pyrroline-5-carboxylate reductase-like involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr15:75,916,463...75,921,560
Ensembl chr15:75,916,477...75,921,560
JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:40,550,257...40,588,463
Ensembl chr19:40,550,257...40,588,463
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:120,638,998...120,643,748
Ensembl chr11:120,635,712...120,643,769
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase family, member 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:180,904,274...180,908,088
Ensembl chr 1:180,904,293...180,908,088
JBrowse link
G Pycrl pyrroline-5-carboxylate reductase-like involved_in
acts_upstream_of_or_within
IEA UniProt GO_REF:0000002 GO_REF:0000004 MGI:1354194 MGI:2152098 NCBI chr15:75,916,463...75,921,560
Ensembl chr15:75,916,477...75,921,560
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) involved_in IMP (MGI:4830440|PMID:19284480) UniProt PMID:19284480 MGI:4830440 NCBI chr 7:126,571,207...126,585,817
Ensembl chr 7:126,571,207...126,585,817
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28627
    metabolic process 11326
      primary metabolic process 9959
        cellular amino acid metabolic process 263
          cellular amino acid biosynthetic process 66
            alpha-amino acid biosynthetic process 61
              glutamine family amino acid biosynthetic process 16
                arginine biosynthetic process + 5
                glutamate biosynthetic process + 4
                glutamine biosynthetic process + 2
                proline biosynthetic process + 5
Path 2
Term Annotations click to browse term
  biological_process 28627
    metabolic process 11326
      cellular metabolic process 10136
        organic acid metabolic process 1002
          oxoacid metabolic process 970
            carboxylic acid metabolic process 950
              carboxylic acid biosynthetic process 307
                cellular amino acid biosynthetic process 66
                  alpha-amino acid biosynthetic process 61
                    glutamine family amino acid biosynthetic process 16
                      arginine biosynthetic process + 5
                      glutamate biosynthetic process + 4
                      glutamine biosynthetic process + 2
                      proline biosynthetic process + 5
paths to the root