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ONTOLOGY REPORT - ANNOTATIONS


Term:glutamine family amino acid biosynthetic process
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Accession:GO:0009084 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.
Synonyms:exact_synonym: glutamine family amino acid anabolism;   glutamine family amino acid biosynthesis;   glutamine family amino acid formation;   glutamine family amino acid synthesis



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arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASS1 argininosuccinate synthase 1 involved_in ISO PMID:19491403
(PMID:18473344), (PMID:27287393), (PMID:8792870)
RGD
UniProt
PMID:8792870 PMID:12470967 PMID:18473344 PMID:19491403 PMID:27287393 RGD:12859071 RGD:631755 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036
JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in ISO (PMID:16899818), (PMID:22049910)
(MGI:5320252|PMID:22228304)
UniProt PMID:16899818 PMID:22049910 PMID:22228304 MGI:5320252 NCBI chr2B:78,182,117...78,267,071
Ensembl chr2B:196,098,910...196,183,323
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GLUD2 glutamate dehydrogenase 2 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr  X:110,223,978...111,065,243 JBrowse link
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr2B:59,071,123...59,297,327
Ensembl chr2B:176,532,940...176,641,894
JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUL glutamate-ammonia ligase ISO RGD PMID:28323 PMID:4403443 RGD:2301547 RGD:2301548 NCBI chr 1:157,882,258...157,891,562
Ensembl chr 1:161,534,106...161,543,411
JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in ISO (PMID:23024808) UniProt PMID:23024808 NCBI chr 8:140,356,586...140,362,972
Ensembl chr 8:143,371,748...143,378,032
JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in ISO (PMID:11092761), (PMID:26297558) UniProt PMID:11092761 PMID:26297558 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095
JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in ISO (PMID:16730026) UniProt PMID:16730026 NCBI chr17:76,337,991...76,348,207
Ensembl chr17:82,040,824...82,045,686
JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in ISO (PMID:23024808) UniProt PMID:23024808 NCBI chr 1:201,381,270...201,385,703 JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:4830440|PMID:19284480) UniProt PMID:19284480 MGI:4830440

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12786
    metabolic process 8099
      primary metabolic process 7110
        cellular amino acid metabolic process 193
          cellular amino acid biosynthetic process 47
            alpha-amino acid biosynthetic process 42
              glutamine family amino acid biosynthetic process 11
                arginine biosynthetic process + 2
                glutamate biosynthetic process + 4
                glutamine biosynthetic process + 1
                proline biosynthetic process + 4
Path 2
Term Annotations click to browse term
  biological_process 12786
    metabolic process 8099
      cellular metabolic process 7388
        organic acid metabolic process 711
          oxoacid metabolic process 688
            carboxylic acid metabolic process 673
              carboxylic acid biosynthetic process 221
                cellular amino acid biosynthetic process 47
                  alpha-amino acid biosynthetic process 42
                    glutamine family amino acid biosynthetic process 11
                      arginine biosynthetic process + 2
                      glutamate biosynthetic process + 4
                      glutamine biosynthetic process + 1
                      proline biosynthetic process + 4
paths to the root