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ONTOLOGY REPORT - ANNOTATIONS


Term:pyruvate family amino acid metabolic process
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Accession:GO:0009078 term browser browse the term
Definition:The chemical reactions and pathways involving any amino acid that requires pyruvate for its synthesis, e.g. alanine.
Synonyms:exact_synonym: pyruvate family amino acid metabolism



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D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in IBA
ISO
IEA
PMID:21873635
(PMID:16616139), (PMID:20603179)
GO_REF:0000107
(MGI:5442503|PMID:20603179)
RGD
Ensembl
PMID:16616139 PMID:20603179 PMID:21873635 GO_REF:0000107 MGI:5442503, RGD:13792537 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741
JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) RGD PMID:17696873 PMID:18492492 PMID:22198249 NCBI chr 9:93,675,384...93,685,337
Ensembl chr 9:93,675,384...93,685,336
JBrowse link
G Gpt glutamic--pyruvic transaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:108,416,646...108,419,495
Ensembl chr 7:108,416,642...108,419,494
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO
IBA
(PMID:20018850)
PMID:21873635
RGD PMID:20018850 PMID:21873635 RGD:13792537 NCBI chr 2:59,336,252...59,377,664
Ensembl chr 2:59,336,283...59,377,926
JBrowse link
L-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpt2 glutamic--pyruvic transaminase 2 involved_in ISO (PMID:11863375) RGD PMID:11863375 NCBI chr19:21,526,800...21,561,314
Ensembl chr19:21,517,621...21,560,610
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      primary metabolic process 10535
        cellular amino acid metabolic process 277
          alpha-amino acid metabolic process 199
            pyruvate family amino acid metabolic process 5
              alanine metabolic process + 5
              pyruvate family amino acid biosynthetic process + 0
              pyruvate family amino acid catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      cellular metabolic process 10719
        organic acid metabolic process 1013
          oxoacid metabolic process 982
            carboxylic acid metabolic process 961
              cellular amino acid metabolic process 277
                alpha-amino acid metabolic process 199
                  pyruvate family amino acid metabolic process 5
                    alanine metabolic process + 5
                    pyruvate family amino acid biosynthetic process + 0
                    pyruvate family amino acid catabolic process + 4
paths to the root