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ONTOLOGY REPORT - ANNOTATIONS


Term:pyruvate family amino acid metabolic process
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Accession:GO:0009078 term browser browse the term
Definition:The chemical reactions and pathways involving any amino acid that requires pyruvate for its synthesis, e.g. alanine.
Synonyms:exact_synonym: pyruvate family amino acid metabolism


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D-alanine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase IEA
ISO
IBA
GO_REF:0000107
(PMID:16616139), (PMID:20603179)
(MGI:5442503|PMID:20603179)
PMID:21873635
Ensembl
RGD
PMID:16616139, PMID:20603179, PMID:21873635 GO_REF:0000107, MGI:5442503, RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) RGD PMID:17696873, PMID:18492492, PMID:22198249 NCBI chr 9:100,281,339...100,291,292
Ensembl chr 9:100,281,339...100,291,291
JBrowse link
G Gpt glutamic--pyruvic transaminase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:117,759,083...117,761,932
Ensembl chr 7:117,759,083...117,761,931
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 ISO
IBA
(PMID:20018850)
PMID:21873635
RGD PMID:20018850, PMID:21873635 RGD:13792537 NCBI chr 2:60,337,667...60,379,144
Ensembl chr 2:60,337,667...60,379,420
JBrowse link
L-alanine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpt2 glutamic--pyruvic transaminase 2 ISO (PMID:11863375) RGD PMID:11863375 NCBI chr19:22,599,003...22,633,529
Ensembl chr19:22,590,881...22,632,071
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      primary metabolic process 10778
        cellular amino acid metabolic process 268
          alpha-amino acid metabolic process 190
            pyruvate family amino acid metabolic process 5
              alanine metabolic process + 5
              pyruvate family amino acid biosynthetic process + 0
              pyruvate family amino acid catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      cellular metabolic process 10964
        organic acid metabolic process 1007
          oxoacid metabolic process 969
            carboxylic acid metabolic process 950
              cellular amino acid metabolic process 268
                alpha-amino acid metabolic process 190
                  pyruvate family amino acid metabolic process 5
                    alanine metabolic process + 5
                    pyruvate family amino acid biosynthetic process + 0
                    pyruvate family amino acid catabolic process + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.