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ONTOLOGY REPORT - ANNOTATIONS


Term:aromatic amino acid family catabolic process
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Accession:GO:0009074 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
Synonyms:exact_synonym: aromatic amino acid family breakdown;   aromatic amino acid family catabolism;   aromatic amino acid family degradation


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aromatic amino acid family catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tat tyrosine aminotransferase IEA UniProt GO_REF:0000002, MGI:2152098 NCBI chr 8:109,986,078...109,999,804
Ensembl chr 8:109,990,437...109,999,803
JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:84,585,159...84,605,942
Ensembl chr 7:84,585,159...84,606,722
JBrowse link
G Gstz1 glutathione transferase zeta 1 (maleylacetoacetate isomerase) IBA
TAS
(MGI:6201960|PMID:21873635)
(MGI:1339892|PMID:10373324)
GO_Central
MGI
PMID:10373324, PMID:21873635 MGI:1339892, MGI:6201960 NCBI chr12:87,147,161...87,164,723
Ensembl chr12:87,147,165...87,164,723
JBrowse link
G Hgd homogentisate 1, 2-dioxygenase IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr16:37,579,742...37,632,026
Ensembl chr16:37,580,153...37,632,020
JBrowse link
G Hpd 4-hydroxyphenylpyruvic acid dioxygenase IEA UniProt GO_REF:0000004, MGI:1354194 NCBI chr 5:123,171,807...123,182,723
Ensembl chr 5:123,171,807...123,182,727
JBrowse link
G Pah phenylalanine hydroxylase IEA UniProt GO_REF:0000002, GO_REF:0000004, MGI:1354194, MGI:2152098 NCBI chr10:87,521,795...87,584,137
Ensembl chr10:87,521,795...87,584,136
JBrowse link
G Qdpr quinoid dihydropteridine reductase IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:45,434,032...45,450,229
Ensembl chr 5:45,434,021...45,450,236
JBrowse link
G Tat tyrosine aminotransferase IEA UniProt GO_REF:0000004, MGI:1354194 NCBI chr 8:109,986,078...109,999,804
Ensembl chr 8:109,990,437...109,999,803
JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd amino carboxymuconate semialdehyde decarboxylase ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 1:127,729,413...127,767,564
Ensembl chr 1:127,729,413...127,767,978
JBrowse link
G Afmid arylformamidase IEA UniProt GO_REF:0000004, MGI:1354194 NCBI chr11:117,825,503...117,839,908
Ensembl chr11:117,825,924...117,839,908
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 IEA UniProt GO_REF:0000004, MGI:1354194 NCBI chr 8:24,584,133...24,596,952
Ensembl chr 8:24,584,136...24,597,009
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 IEA UniProt GO_REF:0000004, MGI:1354194 NCBI chr 8:24,531,892...24,576,414
Ensembl chr 8:24,531,892...24,576,333
JBrowse link
G Kmo kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) IEA UniProt GO_REF:0000002, MGI:2152098 NCBI chr 1:175,632,193...175,660,853
Ensembl chr 1:175,620,381...175,662,116
JBrowse link
G Kynu kynureninase ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr 2:43,555,258...43,683,048
Ensembl chr 2:43,555,329...43,682,715
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase IEA UniProt GO_REF:0000004, MGI:1354194 NCBI chr 3:81,958,412...81,975,728
Ensembl chr 3:81,957,090...81,976,202
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase ISO MGI GO_REF:0000096, MGI:4417868 NCBI chr 2:43,555,258...43,683,048
Ensembl chr 2:43,555,329...43,682,715
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:4417868, MGI:6201960 NCBI chr 3:81,958,412...81,975,728
Ensembl chr 3:81,957,090...81,976,202
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase IDA
IBA
(MGI:3587527|PMID:15866519)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:15866519, PMID:21873635 MGI:3587527, MGI:6201960 NCBI chr11:117,825,503...117,839,908
Ensembl chr11:117,825,924...117,839,908
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 IBA
IDA
ISO
(MGI:6201960|PMID:21873635)
(MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753)
GO_Central
MGI
PMID:2419335, PMID:11751753, PMID:21873635 GO_REF:0000096, MGI:2151782, MGI:2156954, MGI:4417868, MGI:6201960 NCBI chr 8:24,584,133...24,596,952
Ensembl chr 8:24,584,136...24,597,009
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 IBA
ISO
IDA
IMP
(MGI:6201960|PMID:21873635)
(MGI:3712725|PMID:17499941)
(MGI:3719924|PMID:17671174)
GO_Central
MGI
PMID:17499941, PMID:17671174, PMID:21873635 GO_REF:0000096, MGI:3712725, MGI:3719924, MGI:4834177, MGI:6201960 NCBI chr 8:24,531,892...24,576,414
Ensembl chr 8:24,531,892...24,576,333
JBrowse link
G Kynu kynureninase IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:43,555,258...43,683,048
Ensembl chr 2:43,555,329...43,682,715
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO MGI GO_REF:0000096, MGI:4834177 NCBI chr 3:81,958,412...81,975,728
Ensembl chr 3:81,957,090...81,976,202
JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:84,585,159...84,605,942
Ensembl chr 7:84,585,159...84,606,722
JBrowse link
G Gstz1 glutathione transferase zeta 1 (maleylacetoacetate isomerase) TAS (MGI:1339892|PMID:10373324) MGI PMID:10373324 MGI:1339892 NCBI chr12:87,147,161...87,164,723
Ensembl chr12:87,147,165...87,164,723
JBrowse link
G Hgd homogentisate 1, 2-dioxygenase IEA UniProt GO_REF:0000004, MGI:1354194 NCBI chr16:37,579,742...37,632,026
Ensembl chr16:37,580,153...37,632,020
JBrowse link
G Hpd 4-hydroxyphenylpyruvic acid dioxygenase IBA
ISO
(MGI:6201960|PMID:21873635)
(MGI:6362140|PMID:31537781)
GO_Central
MGI
PMID:21873635, PMID:31537781 GO_REF:0000096, MGI:4417868, MGI:6201960, MGI:6362140 NCBI chr 5:123,171,807...123,182,723
Ensembl chr 5:123,171,807...123,182,727
JBrowse link
G Tat tyrosine aminotransferase IDA
ISO
(MGI:5430853|PMID:21153519) UniProt
MGI
PMID:21153519 GO_REF:0000096, MGI:4834177, MGI:5430853 NCBI chr 8:109,986,078...109,999,804
Ensembl chr 8:109,990,437...109,999,803
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23386
    metabolic process 11305
      cellular metabolic process 10088
        organic acid metabolic process 956
          aromatic amino acid family metabolic process 30
            aromatic amino acid family catabolic process 14
              L-phenylalanine catabolic process + 7
              anthranilate catabolic process 0
              aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
              aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
              tryptophan catabolic process + 7
              tyrosine catabolic process + 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.