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ONTOLOGY REPORT - ANNOTATIONS


Term:aromatic amino acid family catabolic process
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Accession:GO:0009074 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
Synonyms:exact_synonym: aromatic amino acid family breakdown;   aromatic amino acid family catabolism;   aromatic amino acid family degradation



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L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSTZ1 glutathione S-transferase zeta 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr 8:50,133,496...50,143,487
Ensembl chr 8:50,133,714...50,143,439
JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr33:24,066,099...24,107,827
Ensembl chr33:24,066,306...24,151,354
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,636,282...106,673,438
Ensembl chr 1:106,657,477...106,673,422
JBrowse link
G QDPR quinoid dihydropteridine reductase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:4155291 PMID:21873635 RGD:5128604 NCBI chr 3:62,970,850...62,987,512
Ensembl chr 3:62,970,121...63,028,395
JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACMSD aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chr19:37,658,999...37,725,426
Ensembl chr19:37,659,226...37,725,172
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) UniProt PMID:17356132 PMID:25767141 NCBI chr 1:106,636,282...106,673,438
Ensembl chr 1:106,657,477...106,673,422
JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 7:32,941,487...32,994,541
Ensembl chr 7:32,941,487...32,994,541
JBrowse link
G KYNU kynureninase involved_in ISO (PMID:17334708) UniProt PMID:17334708 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYNU kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:7236232 PMID:21873635 RGD:2303721 NCBI chr15:53,406,110...53,424,260
Ensembl chr15:53,405,957...53,423,958
JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,636,282...106,673,438
Ensembl chr 1:106,657,477...106,673,422
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753)
GO_Central
MGI
RGD
PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 PMID:21873635 MGI:2151782 MGI:2156954 RGD:2290190 RGD:2290543 NCBI chr16:25,391,759...25,407,161
Ensembl chr16:25,391,754...25,407,048
JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3719924|PMID:17671174)
(MGI:3712725|PMID:17499941)
GO_Central
MGI
PMID:17499941 PMID:17671174 PMID:21873635 MGI:3712725 MGI:3719924 NCBI chr16:25,319,035...25,375,085
Ensembl chr16:25,319,035...25,385,515
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in IEA UniProt GO_REF:0000041 NCBI chr15:53,406,110...53,424,260
Ensembl chr15:53,405,957...53,423,958
JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:50,133,496...50,143,487
Ensembl chr 8:50,133,714...50,143,439
JBrowse link
G HPD 4-hydroxyphenylpyruvate dioxygenase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:31537781)
GO_Central
MGI
PMID:21873635 PMID:31537781 NCBI chr26:7,430,891...7,440,643
Ensembl chr26:7,430,933...7,440,611
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,636,282...106,673,438
Ensembl chr 1:106,657,477...106,673,422
JBrowse link
G TAT tyrosine aminotransferase involved_in ISO (MGI:5430853|PMID:21153519)
(PMID:7999802)
UniProt PMID:7999802 PMID:21153519 MGI:5430853 NCBI chr 5:77,365,589...77,378,474
Ensembl chr 5:77,366,138...77,378,419
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13875
    cellular process 13120
      cellular metabolic process 8168
        cellular catabolic process 1749
          organic acid catabolic process 184
            aromatic amino acid family catabolic process 12
              L-phenylalanine catabolic process + 4
              anthranilate catabolic process 0
              aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
              aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
              tryptophan catabolic process + 7
              tyrosine catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 13875
    cellular process 13120
      cellular metabolic process 8168
        organic acid metabolic process 769
          oxoacid metabolic process 744
            carboxylic acid metabolic process 731
              cellular amino acid metabolic process 219
                aromatic amino acid family metabolic process 26
                  aromatic amino acid family catabolic process 12
                    L-phenylalanine catabolic process + 4
                    anthranilate catabolic process 0
                    aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
                    aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
                    tryptophan catabolic process + 7
                    tyrosine catabolic process + 4
paths to the root