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ONTOLOGY REPORT - ANNOTATIONS


Term:aromatic amino acid family catabolic process
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Accession:GO:0009074 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
Synonyms:exact_synonym: aromatic amino acid family breakdown;   aromatic amino acid family catabolism;   aromatic amino acid family degradation


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L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) UniProt PMID:17356132 PMID:25767141 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034
JBrowse link
G Qdpr quinoid dihydropteridine reductase ISO RGD PMID:4155291 RGD:5128604 NCBI chrNW_004955480:6,646,088...6,666,866
Ensembl chrNW_004955480:6,646,088...6,669,526
JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chrNW_004955440:2,348,434...2,412,706
Ensembl chrNW_004955440:2,348,396...2,412,706
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) UniProt PMID:17356132 PMID:25767141 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034
JBrowse link
G Kynu kynureninase involved_in ISO (PMID:17334708) UniProt PMID:17334708 NCBI chrNW_004955440:9,420,141...9,536,767
Ensembl chrNW_004955440:9,420,009...9,536,761
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004955440:9,420,141...9,536,767
Ensembl chrNW_004955440:9,420,009...9,536,761
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004955471:11,229,795...11,245,255
Ensembl chrNW_004955471:11,229,273...11,245,375
JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:32818467), (PMID:32866000) UniProt PMID:32818467 PMID:32866000 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase acts_upstream_of_or_within ISO (MGI:3587527|PMID:15866519) MGI PMID:15866519 MGI:3587527 NCBI chrNW_004955506:4,351,623...4,379,528
Ensembl chrNW_004955506:4,365,926...4,379,447
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within ISO (MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753) RGD
MGI
PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 MGI:2151782 MGI:2156954 RGD:2290190 RGD:2290543 NCBI chrNW_004955536:2,944,770...2,955,829
Ensembl chrNW_004955536:2,943,611...2,955,829
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:17671174)
(MGI:3719924|PMID:17671174)
(MGI:3712725|PMID:17499941)
UniProt
MGI
PMID:17499941 PMID:17671174 MGI:3712725 MGI:3719924 NCBI chrNW_004955536:2,894,410...2,938,862
Ensembl chrNW_004955536:2,894,308...2,939,016
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in ISO (PMID:27762317) UniProt PMID:27762317 NCBI chrNW_004955471:11,229,795...11,245,255
Ensembl chrNW_004955471:11,229,273...11,245,375
JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpd 4-hydroxyphenylpyruvate dioxygenase involved_in
acts_upstream_of_or_within
ISO PMID:8814303
(PMID:31537781)
UniProt
MGI
PMID:8814303 PMID:31537781 RGD:8554707 NCBI chrNW_004955482:6,586,975...6,595,034
Ensembl chrNW_004955482:6,586,975...6,595,034
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132) UniProt PMID:17356132 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034
JBrowse link
G Tat tyrosine aminotransferase involved_in ISO (PMID:7999802)
(MGI:5430853|PMID:21153519)
UniProt PMID:7999802 PMID:21153519 MGI:5430853 NCBI chrNW_004955484:4,278,083...4,287,535
Ensembl chrNW_004955484:4,276,953...4,287,627
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11982
    cellular process 11219
      cellular metabolic process 6951
        cellular catabolic process 1477
          organic acid catabolic process 142
            aromatic amino acid family catabolic process 10
              L-phenylalanine catabolic process + 2
              anthranilate catabolic process 0
              aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
              aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
              tryptophan catabolic process + 7
              tyrosine catabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 11982
    cellular process 11219
      cellular metabolic process 6951
        organic acid metabolic process 640
          oxoacid metabolic process 618
            carboxylic acid metabolic process 613
              cellular amino acid metabolic process 185
                aromatic amino acid family metabolic process 21
                  aromatic amino acid family catabolic process 10
                    L-phenylalanine catabolic process + 2
                    anthranilate catabolic process 0
                    aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
                    aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
                    tryptophan catabolic process + 7
                    tyrosine catabolic process + 3
paths to the root