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ONTOLOGY REPORT - ANNOTATIONS


Term:aromatic amino acid family catabolic process
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Accession:GO:0009074 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
Synonyms:exact_synonym: aromatic amino acid family breakdown;   aromatic amino acid family catabolism;   aromatic amino acid family degradation



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L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL4I1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) UniProt PMID:17356132 PMID:25767141 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389
JBrowse link
G QDPR quinoid dihydropteridine reductase ISO RGD PMID:4155291 RGD:5128604 NCBI chr 4:11,906,439...11,932,311
Ensembl chr 4:17,199,772...17,225,667
JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACMSD aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chr2B:24,958,661...25,019,901
Ensembl chr2B:138,918,281...138,978,407
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) UniProt PMID:17356132 PMID:25767141 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389
JBrowse link
G KYNU kynureninase involved_in ISO (PMID:17334708) UniProt PMID:17334708 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYNU kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266
JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL4I1 interleukin 4 induced 1 involved_in ISO (PMID:32818467), (PMID:32866000) UniProt PMID:32818467 PMID:32866000 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase acts_upstream_of_or_within ISO (MGI:3587527|PMID:15866519) MGI PMID:15866519 MGI:3587527 NCBI chr17:72,265,365...72,285,764
Ensembl chr17:77,816,908...77,835,905
JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within ISO (MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753) RGD
MGI
PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 MGI:2151782 MGI:2156954 RGD:2290190 RGD:2290543 NCBI chr 8:39,108,310...39,123,611
Ensembl chr 8:36,617,312...36,632,352
JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:17671174)
(MGI:3712725|PMID:17499941)
(MGI:3719924|PMID:17671174)
UniProt
MGI
PMID:17499941 PMID:17671174 MGI:3712725 MGI:3719924 NCBI chr 8:39,149,045...39,209,671
Ensembl chr 8:36,665,240...36,717,420
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in ISO (PMID:27762317) UniProt PMID:27762317 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266
JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPD 4-hydroxyphenylpyruvate dioxygenase involved_in
acts_upstream_of_or_within
ISO PMID:8814303
(PMID:31537781)
UniProt
MGI
PMID:8814303 PMID:31537781 RGD:8554707 NCBI chr12:119,442,893...119,462,171
Ensembl chr12:122,813,141...122,831,701
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in ISO (PMID:17356132) UniProt PMID:17356132 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389
JBrowse link
G TAT tyrosine aminotransferase involved_in ISO (PMID:7999802)
(MGI:5430853|PMID:21153519)
UniProt PMID:7999802 PMID:21153519 MGI:5430853 NCBI chr16:53,434,028...53,443,624
Ensembl chr16:71,404,399...71,413,886
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12659
    cellular process 11796
      cellular metabolic process 7256
        cellular catabolic process 1531
          organic acid catabolic process 154
            aromatic amino acid family catabolic process 10
              L-phenylalanine catabolic process + 2
              anthranilate catabolic process 0
              aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
              aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
              tryptophan catabolic process + 7
              tyrosine catabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 12659
    cellular process 11796
      cellular metabolic process 7256
        organic acid metabolic process 700
          oxoacid metabolic process 677
            carboxylic acid metabolic process 665
              cellular amino acid metabolic process 190
                aromatic amino acid family metabolic process 21
                  aromatic amino acid family catabolic process 10
                    L-phenylalanine catabolic process + 2
                    anthranilate catabolic process 0
                    aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 0
                    aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway 0
                    tryptophan catabolic process + 7
                    tyrosine catabolic process + 3
paths to the root