Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:aromatic amino acid family metabolic process
go back to main search page
Accession:GO:0009072 term browser browse the term
Definition:The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
Synonyms:exact_synonym: aromatic amino acid family metabolism


show annotations for term's descendants           Sort by:
 
anthranilate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYNU kynureninase ISO (PMID:11985583) UniProtKB PMID:11985583 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TH tyrosine hydroxylase ISO (MGI:2386819|PMID:9520487)
(MGI:72094|PMID:7715703), (MGI:77787|PMID:7592982)
PMID:11943812
RGD
MGI
BHF-UCL
PMID:2427363, PMID:7592982, PMID:7715703, PMID:9520487, PMID:11943812, PMID:19584816 MGI:2386819, MGI:72094, MGI:77787, RGD:1580046, RGD:5129111, RGD:5130972 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433
JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G QDPR quinoid dihydropteridine reductase ISO RGD PMID:4155291 RGD:5128604 NCBI chr 4:11,906,439...11,932,311
Ensembl chr 4:17,199,772...17,225,667
JBrowse link
L-phenylalanine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase ISO RGD PMID:16953590 RGD:1601531 NCBI chr12:100,417,267...100,496,888
Ensembl chr12:103,811,761...103,891,726
JBrowse link
G PCBD1 pterin-4 alpha-carbinolamine dehydratase 1 ISO PMID:1465414 CAFA PMID:1465414 RGD:12792994 NCBI chr10:67,353,903...67,359,073
Ensembl chr10:69,878,773...69,881,174
JBrowse link
G SPR sepiapterin reductase ISO (MGI:3722569|PMID:16532389) MGI PMID:16532389 MGI:3722569 NCBI chr2A:72,939,621...72,944,669
Ensembl chr2A:74,433,056...74,438,105
JBrowse link
melanin biosynthetic process from tyrosine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCT dopachrome tautomerase ISO (MGI:3690794|PMID:2169885) UniProt PMID:2169885 MGI:3690794 NCBI chr13:75,590,366...75,730,956
Ensembl chr13:94,773,794...94,816,083
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARK7 Parkinsonism associated deglycase ISO (PMID:16731528) ParkinsonsUK-UCL PMID:16731528 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271
JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACMSD aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chr2B:24,958,661...25,019,901
Ensembl chr2B:138,918,281...138,978,407
JBrowse link
G KYNU kynureninase ISO (PMID:17334708) UniProtKB PMID:17334708 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYNU kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase ISO (MGI:3587527|PMID:15866519) MGI PMID:15866519 MGI:3587527 NCBI chr17:72,265,365...72,285,764
Ensembl chr17:77,816,908...77,835,905
JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 ISO (MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753) RGD
MGI
PMID:2419335, PMID:10719243, PMID:11513477, PMID:11751753 MGI:2151782, MGI:2156954, RGD:2290190, RGD:2290543 NCBI chr 8:39,108,310...39,123,611
Ensembl chr 8:36,617,312...36,632,352
JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 ISO (PMID:17671174)
(MGI:3719924|PMID:17671174)
(MGI:3712725|PMID:17499941)
UniProtKB
MGI
PMID:17499941, PMID:17671174 MGI:3712725, MGI:3719924 NCBI chr 8:39,149,045...39,209,671
Ensembl chr 8:36,665,240...36,717,420
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO (PMID:27762317) UniProtKB PMID:27762317 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266
JBrowse link
tryptophan metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha ISO (MGI:53851|PMID:4147174) MGI PMID:4147174 MGI:53851 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO RGD PMID:3400092, PMID:3899109, PMID:10719243 RGD:2290190, RGD:2290313, RGD:2291804 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266
JBrowse link
tyrosine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase ISO RGD PMID:16953590 RGD:1601531 NCBI chr12:100,417,267...100,496,888
Ensembl chr12:103,811,761...103,891,726
JBrowse link
tyrosine biosynthetic process, by oxidation of phenylalanine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase ISO RGD PMID:10839989 RGD:1601535 NCBI chr12:100,417,267...100,496,888
Ensembl chr12:103,811,761...103,891,726
JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPD 4-hydroxyphenylpyruvate dioxygenase ISO PMID:8814303 UniProt PMID:8814303 RGD:8554707 NCBI chr12:119,442,893...119,462,171
Ensembl chr12:122,813,141...122,831,701
JBrowse link
G TAT tyrosine aminotransferase ISO (PMID:7999802)
(MGI:5430853|PMID:21153519)
UniProtKB
UniProt
PMID:7999802, PMID:21153519 MGI:5430853 NCBI chr16:53,434,028...53,443,624
Ensembl chr16:71,404,399...71,413,886
JBrowse link
tyrosine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha ISO (MGI:53851|PMID:4147174) MGI PMID:4147174 MGI:53851 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756
JBrowse link
G IYD iodotyrosine deiodinase ISO (PMID:25395621) UniProt
UniProtKB
PMID:25395621 NCBI chr 6:148,178,638...148,216,122
Ensembl chr 6:152,886,373...152,922,152
JBrowse link
G THAP4 THAP domain containing 4 ISO (PMID:30524950) UniProt PMID:30524950 NCBI chr2B:128,858,512...128,913,474
Ensembl chr2B:247,650,249...247,701,219
JBrowse link
G TTC36 tetratricopeptide repeat domain 36 ISO (MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:6362140 NCBI chr11:113,364,559...113,368,586
Ensembl chr11:117,295,191...117,298,928
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12566
    metabolic process 7977
      cellular metabolic process 7331
        organic acid metabolic process 684
          aromatic amino acid family metabolic process 19
            L-dopa metabolic process + 1
            L-phenylalanine metabolic process + 4
            anthranilate metabolic process + 1
            aromatic amino acid family biosynthetic process + 2
            aromatic amino acid family catabolic process + 9
            gliotoxin biosynthetic process + 0
            para-aminobenzoic acid metabolic process + 0
            tryptophan metabolic process + 7
            tyrosine metabolic process + 9
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.