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ONTOLOGY REPORT - ANNOTATIONS

Term:aspartate family amino acid catabolic process
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Accession:GO:0009068 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.
Synonyms:exact_synonym: aspartate family amino acid breakdown;   aspartate family amino acid catabolism;   aspartate family amino acid degradation


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asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:12753071 MGI
Ensembl		 PMID:12753071 GO_REF:0000107 RGD:1299508 NCBI chr18:54,215,920...54,238,094
Ensembl chr18:54,216,926...54,238,059 		JBrowse link
G SCGB1A1 secretoglobin family 1A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,187,487...54,191,493
Ensembl chr18:54,187,487...54,191,482 		JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in ISO (PMID:9163533) UniProt PMID:9163533 NCBI chr12:67,080,646...67,104,429
Ensembl chr12:67,081,329...67,104,397
Ensembl chr12:67,081,329...67,104,397 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in ISO (PMID:2567216) UniProt PMID:2567216 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218 		JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10567240) Ensembl
MGI		 PMID:10567240 GO_REF:0000107 NCBI chr14:59,950,123...59,993,457
Ensembl chr14:59,951,216...60,000,212 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:43,200,343...43,212,288
Ensembl chr 9:43,200,371...43,212,288 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:59,950,123...59,993,457
Ensembl chr14:59,951,216...60,000,212 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:48,003,730...48,025,001
Ensembl chr 8:48,002,211...48,024,999 		JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAT1A methionine adenosyltransferase 1A involved_in ISO (PMID:10677294) UniProt PMID:10677294 NCBI chr 4:29,450,857...29,467,251
Ensembl chr 4:29,452,601...29,466,929 		JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCAT glycine C-acetyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr10:26,821,121...26,827,496
Ensembl chr10:26,821,027...26,827,707 		JBrowse link
G TDH L-threonine dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21896756) Ensembl
MGI		 PMID:21896756 GO_REF:0000107 NCBI chr25:26,541,717...26,560,366 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17067
    metabolic process 10852
      catabolic process 2439
        amino acid catabolic process 100
          alpha-amino acid catabolic process 85
            L-amino acid catabolic process 67
              aspartate family amino acid catabolic process 11
                L-lysine catabolic process + 3
                asparagine catabolic process + 2
                aspartate catabolic process + 3
                hydroxylysine catabolic process 0
                methionine catabolic process + 1
                threonine catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 17067
    metabolic process 10852
      cellular metabolic process 9056
        organic acid metabolic process 905
          oxoacid metabolic process 898
            carboxylic acid metabolic process 883
              carboxylic acid catabolic process 224
                alpha-amino acid catabolic process 85
                  L-amino acid catabolic process 67
                    aspartate family amino acid catabolic process 11
                      L-lysine catabolic process + 3
                      asparagine catabolic process + 2
                      aspartate catabolic process + 3
                      hydroxylysine catabolic process 0
                      methionine catabolic process + 1
                      threonine catabolic process + 2
paths to the root