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ONTOLOGY REPORT - ANNOTATIONS

Term:aspartate family amino acid catabolic process
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Accession:GO:0009068 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.
Synonyms:exact_synonym: aspartate family amino acid breakdown;   aspartate family amino acid catabolism;   aspartate family amino acid degradation

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aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO (PMID:9163533) UniProt PMID:9163533 NCBI chrNW_004955411:35,142,415...35,163,234
Ensembl chrNW_004955411:35,143,735...35,163,276 		JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO (PMID:2241899) UniProt PMID:2241899 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 involved_in ISO (PMID:2567216) UniProt PMID:2567216 NCBI chrNW_004955433:16,121,795...16,145,129
Ensembl chrNW_004955433:16,122,824...16,145,113 		JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase acts_upstream_of_or_within ISO (PMID:10567240) MGI PMID:10567240 NCBI chrNW_004955479:3,746,003...3,805,835
Ensembl chrNW_004955479:3,742,757...3,814,338 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO (PMID:10642506) UniProt PMID:10642506 NCBI chrNW_004955481:4,128,503...4,225,027
Ensembl chrNW_004955481:4,128,509...4,143,334 		JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A involved_in ISO (PMID:10677294) UniProt PMID:10677294 NCBI chrNW_004955510:283,860...300,991
Ensembl chrNW_004955510:281,331...300,985 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12483
    metabolic process 7924
      catabolic process 1948
        amino acid catabolic process 70
          alpha-amino acid catabolic process 59
            L-amino acid catabolic process 43
              aspartate family amino acid catabolic process 6
                L-lysine catabolic process + 2
                asparagine catabolic process + 0
                aspartate catabolic process + 3
                hydroxylysine catabolic process 0
                methionine catabolic process + 1
                threonine catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 12483
    metabolic process 7924
      cellular metabolic process 6697
        organic acid metabolic process 676
          oxoacid metabolic process 672
            carboxylic acid metabolic process 664
              carboxylic acid catabolic process 164
                alpha-amino acid catabolic process 59
                  L-amino acid catabolic process 43
                    aspartate family amino acid catabolic process 6
                      L-lysine catabolic process + 2
                      asparagine catabolic process + 0
                      aspartate catabolic process + 3
                      hydroxylysine catabolic process 0
                      methionine catabolic process + 1
                      threonine catabolic process + 0
paths to the root