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ONTOLOGY REPORT - ANNOTATIONS

Term:aspartate family amino acid catabolic process
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Accession:GO:0009068 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.
Synonyms:exact_synonym: aspartate family amino acid breakdown;   aspartate family amino acid catabolism;   aspartate family amino acid degradation


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asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:12753071 MGI
Ensembl		 PMID:12753071 GO_REF:0000107 RGD:1299508 NCBI chr11:57,700,104...57,750,371
Ensembl chr11:61,056,817...61,107,485 		JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in ISO (PMID:9163533) UniProt PMID:9163533 NCBI chr 6:108,199,861...108,223,844
Ensembl chr 6:112,269,271...112,292,980 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378 		JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350812|PMID:10567240) MGI
Ensembl		 PMID:10567240 GO_REF:0000107 MGI:1350812 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:27,717,083...27,820,776
Ensembl chr17:28,225,831...28,240,210 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:55,433,358...55,455,876
Ensembl chr14:74,278,128...74,300,133 		JBrowse link
lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346 		JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAT1A methionine adenosyltransferase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:76,677,815...76,697,512
Ensembl chr10:80,280,063...80,298,291 		JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCAT glycine C-acetyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr22:18,722,886...18,731,963
Ensembl chr22:36,554,067...36,563,429 		JBrowse link
G LOC100990410 L-threonine 3-dehydrogenase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:7,837,080...7,855,179 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15412
    metabolic process 10019
      primary metabolic process 7256
        amino acid metabolic process 262
          amino acid catabolic process 90
            aspartate family amino acid catabolic process 10
              asparagine catabolic process + 1
              aspartate catabolic process + 3
              hydroxylysine catabolic process 0
              lysine catabolic process + 3
              methionine catabolic process + 1
              threonine catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 15412
    metabolic process 10019
      cellular metabolic process 6027
        organic acid metabolic process 858
          oxoacid metabolic process 852
            carboxylic acid metabolic process 834
              amino acid metabolic process 262
                alpha-amino acid metabolic process 186
                  aspartate family amino acid metabolic process 37
                    aspartate family amino acid catabolic process 10
                      asparagine catabolic process + 1
                      aspartate catabolic process + 3
                      hydroxylysine catabolic process 0
                      lysine catabolic process + 3
                      methionine catabolic process + 1
                      threonine catabolic process + 2
paths to the root