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ONTOLOGY REPORT - ANNOTATIONS


Term:glutamine family amino acid catabolic process
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Accession:GO:0009065 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.
Synonyms:exact_synonym: glutamine family amino acid breakdown;   glutamine family amino acid catabolism;   glutamine family amino acid degradation



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arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) RGD PMID:24895913 NCBI chr 2:234,667,499...234,800,322
Ensembl chr 2:234,667,491...234,799,339
JBrowse link
G Fah fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2155424|MGI:2155425 (PMID:11209059)
Ensembl
RGD
PMID:11209059 GO_REF:0000107 NCBI chr 1:138,548,830...138,571,599
Ensembl chr 1:138,548,834...138,571,505
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in IDA
IBA
PMID:1383204
GO_REF:0000033
GO_Central PMID:1383204 GO_REF:0000033, RGD:8553334 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO
IBA
IEA
(PMID:7504305)
GO_REF:0000033
GO_REF:0000107
(MGI:3807772|PMID:1383204)
RGD
GO_Central
Ensembl
PMID:1383204 PMID:7504305 GO_REF:0000033 GO_REF:0000107 MGI:3807772 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO
IBA
IEA
(PMID:1378832), (PMID:7488039)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:1378832 PMID:7488039 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:187,347,862...187,367,644
Ensembl chr 1:187,347,865...187,367,682
JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:15753084 GO_REF:0000033, RGD:8693655 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422
JBrowse link
G Arg2 arginase 2 involved_in TAS
IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:14871882 PMID:15753084 GO_REF:0000033, RGD:1358311, RGD:8693655 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:187,347,862...187,367,644
Ensembl chr 1:187,347,865...187,367,682
JBrowse link
arginine deiminase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Padi3 peptidyl arginine deiminase 3 NAS RGD PMID:9192727 RGD:69926 NCBI chr 5:153,089,717...153,117,146
Ensembl chr 5:153,089,717...153,117,146
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within
ISO
IBA
IDA
(PMID:19839645)
GO_REF:0000033
PMID:12753071
RGD
GO_Central
PMID:19839645 PMID:12753071 PMID:12753071 GO_REF:0000033, RGD:1299508, RGD:1299508 NCBI chr 1:206,006,103...206,027,115
Ensembl chr 1:206,006,109...206,027,108
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad1 glutamate decarboxylase 1 involved_in ISO
IEA
(PMID:17384644)
GO_REF:0000107
RGD
Ensembl
PMID:17384644 GO_REF:0000107 NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in TAS
IBA
ISO
GO_REF:0000033
(PMID:11032875), (PMID:6121377)
GO_Central
RGD
PMID:6121377 PMID:11032875 PMID:12684230 GO_REF:0000033, RGD:1601355 NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957
JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
GO_REF:0000107
(PMID:4193185)
Ensembl
RGD
PMID:4193185 PMID:16489927 GO_REF:0000107, RGD:13504861 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within IDA
ISO
(PMID:4193185) RGD PMID:4193185 PMID:16489927 RGD:13504861 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:4193185)
Ensembl
RGD
PMID:4193185 GO_REF:0000107 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 involved_in ISO
IEA
ISS
(PMID:16435184)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16435184 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:9,705,966...9,732,580
Ensembl chr 5:9,705,970...9,732,517
JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:8999827 GO_REF:0000033, RGD:1625237 NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155
JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase acts_upstream_of_or_within
involved_in
TAS
ISO
IBA
IEA
ISS
MGI:3514104 (PMID:16641247)
GO_REF:0000033
(MGI:5320252|PMID:22228304)
GO_REF:0000107
(PMID:22049910)
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:16641247 PMID:22049910 PMID:22228304 PMID:1918000 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5320252, RGD:728510 NCBI chr 9:49,344,616...49,416,900
Ensembl chr 9:49,344,781...49,416,900
JBrowse link
G Gls2 glutaminase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:617,252...633,424
Ensembl chr 7:617,288...633,426
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IDA RGD PMID:8463258 RGD:633710 NCBI chr14:31,215,741...31,250,144
Ensembl chr14:31,216,165...31,250,144
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246
JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IBA
(PMID:16616139)
GO_REF:0000033
RGD
GO_Central
PMID:16616139 GO_REF:0000033 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741
JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:85,753,558...85,767,165
Ensembl chr 1:85,753,644...85,767,162
JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:151,880,002...151,905,491
Ensembl chr 5:151,830,701...151,925,345
JBrowse link
G Iffo2 intermediate filament family orphan 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:151,830,900...151,876,948
Ensembl chr 5:151,830,701...151,925,345
JBrowse link
G Prodh proline dehydrogenase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:82,910,043...82,927,305
Ensembl chr11:82,910,137...82,927,305
JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:85,753,558...85,767,165
Ensembl chr 1:85,753,644...85,767,162
JBrowse link
G Tas1r2 taste 1 receptor member 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:151,909,617...151,925,760
Ensembl chr 5:151,830,701...151,925,345
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11455
      organonitrogen compound metabolic process 5663
        proteinogenic amino acid metabolic process 164
          proteinogenic amino acid catabolic process 72
            glutamine family amino acid catabolic process 26
              arginine catabolic process + 10
              asparagine catabolic process + 1
              glutamate catabolic process + 6
              glutamine catabolic process + 3
              proline catabolic process + 6
Path 2
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11455
      cellular metabolic process 9554
        organic acid metabolic process 1021
          oxoacid metabolic process 1010
            carboxylic acid metabolic process 995
              alpha-amino acid metabolic process 211
                L-amino acid metabolic process 177
                  glutamine family amino acid metabolic process 75
                    glutamine family amino acid catabolic process 26
                      arginine catabolic process + 10
                      asparagine catabolic process + 1
                      glutamate catabolic process + 6
                      glutamine catabolic process + 3
                      proline catabolic process + 6
paths to the root