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ONTOLOGY REPORT - ANNOTATIONS


Term:glutamine family amino acid metabolic process
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Accession:GO:0009064 term browser browse the term
Definition:The chemical reactions and pathways involving amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.
Synonyms:exact_synonym: glutamine family amino acid metabolism



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ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3604426|PMID:12559843) Ensembl
Ensembl
MGI
PMID:12559843 GO_REF:0000107 MGI:3604426 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,869
JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:28323 RGD:2301547 NCBI chr 9:123,751,551...123,762,575
Ensembl chr 9:123,751,548...123,762,547
JBrowse link
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IEA UniProt
Ensembl
GO_REF:0000041 GO_REF:0000107 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,869
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA
IBA
ISO
(PMID:21873635) UniProt
UniProt
Ensembl
GO_Central
InterPro
RGD
GO_Central
PMID:12470967 PMID:21873635 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:631755 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,361
JBrowse link
G NAGS N-acetylglutamate synthase involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
UniProt
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000041 NCBI chr12:19,170,398...19,173,968
Ensembl chr12:19,169,961...19,174,747
JBrowse link
G OTC ornithine transcarbamylase involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,837
JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,869
JBrowse link
G OTC ornithine transcarbamylase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,837
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA InterPro
Ensembl
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:130,485,305...130,617,534
Ensembl chr 4:130,483,878...130,617,531
JBrowse link
G DDAH2 dimethylarginine dimethylaminohydrolase 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 7:23,838,993...23,842,514
Ensembl chr 7:23,838,993...23,842,516
JBrowse link
G FAH fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1929783|PMID:11209059) Ensembl
Ensembl
MGI
PMID:11209059 GO_REF:0000107 MGI:1929783 NCBI chr 7:49,047,833...49,087,790
Ensembl chr 7:49,047,983...49,105,598
JBrowse link
G NOS1 nitric oxide synthase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:35,112,898...35,299,297
Ensembl chr14:35,113,184...35,295,972
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,944...44,327,111
JBrowse link
G NOS3 nitric oxide synthase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,156...6,228,938
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:133,808,193...133,830,517 JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:15753084 PMID:21873635 RGD:8693655 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,038...32,028,986
JBrowse link
G ARG2 arginase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:15753084 PMID:21873635 RGD:8693655 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,987...91,385,911
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:133,808,193...133,830,517 JBrowse link
arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in IEA
ISO
UniProt
InterPro
UniProt
RGD
PMID:4062872 GO_REF:0000002 GO_REF:0000043 RGD:2300098 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,038...32,028,986
JBrowse link
G ARG2 arginase 2 involved_in ISO
IEA
RGD
InterPro
UniProt
PMID:16537391 GO_REF:0000002 GO_REF:0000043 RGD:1582129 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,987...91,385,911
JBrowse link
G ASL argininosuccinate lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,869
JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:17322279 PMID:21873635 RGD:1625578 NCBI chr 4:130,485,305...130,617,534
Ensembl chr 4:130,483,878...130,617,531
JBrowse link
G DDAH2 dimethylarginine dimethylaminohydrolase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:17322279 PMID:21873635 RGD:1625578 NCBI chr 7:23,838,993...23,842,514
Ensembl chr 7:23,838,993...23,842,516
JBrowse link
G SLC39A8 solute carrier family 39 member 8 involved_in
acts_upstream_of
IEA
ISO
(MGI:5912781|PMID:28481222) Ensembl
Ensembl
UniProt
PMID:28481222 GO_REF:0000107 MGI:5912781 NCBI chr 8:118,604,852...118,678,115
Ensembl chr 8:118,605,293...118,684,039
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
PMID:12753071
GO_Central
Ensembl
GO_Central
MGI
Ensembl
PMID:12753071 PMID:21873635 GO_REF:0000107 RGD:1299508 NCBI chr 2:9,328,260...9,353,384
Ensembl chr 2:9,328,269...9,353,340
JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr15:95,513,414...95,606,029
Ensembl chr15:95,513,380...95,598,311
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,550
JBrowse link
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr15:77,895,935...78,021,930
Ensembl chr15:77,895,935...78,098,383
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD1 glutamate decarboxylase 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:76,991,863...77,034,819
Ensembl chr15:76,991,928...77,034,817
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875), (PMID:6121377) BHF-UCL PMID:6121377 PMID:11032875 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,550
JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
Ensembl
MGI
RGD
PMID:4193185 PMID:16489927 GO_REF:0000107 MGI:53641 RGD:13504861 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
Ensembl
MGI
RGD
PMID:4193185 PMID:16489927 GO_REF:0000107 MGI:53641 RGD:13504861 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
Ensembl
MGI
PMID:4193185 GO_REF:0000107 MGI:53641 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
Ensembl
MGI
PMID:4193185 GO_REF:0000107 MGI:53641 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADHFE1 alcohol dehydrogenase iron containing 1 involved_in ISO (PMID:16435184) UniProt PMID:16435184 NCBI chr 4:68,251,970...68,285,436 JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD2 glutamate decarboxylase 2 involved_in ISO
IBA
(PMID:21873635) RGD
GO_Central
PMID:8999827 PMID:21873635 RGD:1625237 NCBI chr10:49,316,682...49,391,013
Ensembl chr10:49,313,641...49,390,926
JBrowse link
glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:19,768,816...19,792,254
Ensembl chr14:19,768,499...19,791,938
JBrowse link
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:107,174,062...107,221,373
Ensembl chr14:107,170,689...107,221,215
JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3767902|PMID:17854388) Ensembl
Ensembl
MGI
PMID:17854388 GO_REF:0000107 MGI:3767902 NCBI chr 7:19,351,485...19,375,515
Ensembl chr 7:19,351,361...19,379,100
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,991...126,184,870
JBrowse link
G DGLUCY D-glutamate cyclase involved_in ISO (MGI:5901965|PMID:28266638) UniProt PMID:28266638 MGI:5901965 NCBI chr 7:112,753,719...112,862,247 JBrowse link
G FPGS folylpolyglutamate synthase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:268,281,298...268,309,397
Ensembl chr 1:268,287,729...268,309,411
JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:27,209,565...27,253,535
Ensembl chr 7:27,209,564...27,253,535
JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:123,371,198...123,390,130
Ensembl chr 4:123,371,193...123,390,135
JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr14:49,618,737...49,638,054 JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:4403443 RGD:2301548 NCBI chr 9:123,751,551...123,762,575
Ensembl chr 9:123,751,548...123,762,547
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
G LOC102167410 5-formyltetrahydrofolate cyclo-ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,717,518...48,873,492 JBrowse link
G NAGS N-acetylglutamate synthase involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:2388220|PMID:12049647)
GO_Central
GO_Central
Ensembl
MGI
PMID:12049647 PMID:21873635 GO_REF:0000107 MGI:2388220 NCBI chr12:19,170,398...19,173,968
Ensembl chr12:19,169,961...19,174,747
JBrowse link
G TAT tyrosine aminotransferase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,587...14,583,177
JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUL glutamate-ammonia ligase involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
GO_Central
InterPro
RGD
InterPro
PMID:28323 PMID:4403443 PMID:21873635 GO_REF:0000002 RGD:2301547 RGD:2301548 NCBI chr 9:123,751,551...123,762,575
Ensembl chr 9:123,751,548...123,762,547
JBrowse link
G LGSN lengsin, lens protein with glutamine synthetase domain involved_in
NOT|involved_in
IEA
IBA
(PMID:21873635) InterPro
GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 1:82,360,058...82,388,479
Ensembl chr 1:82,360,563...82,387,717
JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3623875|PMID:16641247)
GO_Central
GO_Central
Ensembl
MGI
PMID:16641247 PMID:21873635 GO_REF:0000107 MGI:3623875 NCBI chr15:95,513,414...95,606,029
Ensembl chr15:95,513,380...95,598,311
JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chr 8:55,652,194...55,701,077
Ensembl chr 8:55,652,201...55,701,077
JBrowse link
glutamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:12522136 RGD:5135508
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt
UniProt
GO_REF:0000043 NCBI chr 9:77,318,341...77,336,290
Ensembl chr 9:77,318,213...77,509,020
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,991...126,184,870
JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
InterPro
GO_Central
RGD
PMID:2474281 PMID:2803258 PMID:21873635 GO_REF:0000002 RGD:10755425 RGD:5132588 NCBI chr 3:111,887,017...111,914,511
Ensembl chr 3:111,887,020...111,914,495
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr15:113,210,038...113,339,086
Ensembl chr15:113,209,999...113,339,078
JBrowse link
G CTPS1 CTP synthase 1 involved_in IEA UniProt
UniProt
GO_REF:0000043 GO_REF:0000104 NCBI chr 6:170,201,749...170,233,105
Ensembl chr 6:170,201,748...170,233,054
JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA UniProt
UniProt
GO_REF:0000043 GO_REF:0000104 NCBI chr  X:13,050,740...13,181,131
Ensembl chr  X:13,049,941...13,174,568
JBrowse link
G DEDD death effector domain containing involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:89,311,308...89,323,692
Ensembl chr 4:89,311,310...89,323,724
JBrowse link
G GATD1 glutamine amidotransferase class 1 domain containing 1 involved_in IEA UniProt
UniProt
GO_REF:0000043 NCBI chr 2:472,766...484,609
Ensembl chr 2:474,296...480,736
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 involved_in IEA UniProt
UniProt
GO_REF:0000043 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:72,983,188...73,085,319
JBrowse link
G GFPT2 glutamine-fructose-6-phosphate transaminase 2 involved_in IEA UniProt
UniProt
GO_REF:0000043 NCBI chr 2:78,285,208...78,328,288
Ensembl chr 2:78,285,203...78,329,002
JBrowse link
G GLS glutaminase involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr15:95,513,414...95,606,029
Ensembl chr15:95,513,380...95,598,311
JBrowse link
G GLS2 glutaminase 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 5:21,806,405...21,820,001
Ensembl chr 5:21,806,406...21,820,001
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,550
JBrowse link
G GMPS guanine monophosphate synthase involved_in IEA UniProt GO_REF:0000043 NCBI chr13:95,742,342...95,820,903
Ensembl chr13:95,742,383...95,819,762
JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3769075|PMID:17237885) Ensembl
Ensembl
MGI
PMID:17237885 GO_REF:0000107 MGI:3769075 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,789,110
JBrowse link
G NIT2 nitrilase family member 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:158,630,997...158,653,164
Ensembl chr13:158,630,743...158,653,095
JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase involved_in ISO
IEA
RGD
UniProt
PMID:3436958 GO_REF:0000043 RGD:1599004 NCBI chr12:53,458,401...53,477,254 JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3835979|PMID:19114063) Ensembl
Ensembl
MGI
PMID:19114063 GO_REF:0000107 MGI:3835979 NCBI chr 4:101,445,977...101,478,144
Ensembl chr 4:101,408,308...101,478,144
JBrowse link
G SIRT4 sirtuin 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:40,290,288...40,303,887
Ensembl chr14:40,286,955...40,303,888
JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA UniProt
InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 NCBI chr 5:87,551,887...87,569,271
Ensembl chr 5:87,553,022...87,569,305
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt
UniProt
GO_REF:0000041
G HAL histidine ammonia-lyase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 5:87,522,483...87,547,489
Ensembl chr 5:87,522,522...87,547,491
JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 7:53,592,763...53,634,214
Ensembl chr 7:53,590,776...53,637,714
JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 5:87,551,887...87,569,271
Ensembl chr 5:87,553,022...87,569,305
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt
UniProt
GO_REF:0000041
G HAL histidine ammonia-lyase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 5:87,522,483...87,547,489
Ensembl chr 5:87,522,522...87,547,491
JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 7:53,592,763...53,634,214
Ensembl chr 7:53,590,776...53,637,714
JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt
UniProt
GO_REF:0000041 GO_REF:0000104 NCBI chr14:107,174,062...107,221,373
Ensembl chr14:107,170,689...107,221,215
JBrowse link
G NOXRED1 NADP dependent oxidoreductase domain containing 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 7:100,458,164...100,482,053
Ensembl chr 7:100,464,467...100,510,095
JBrowse link
G OAT ornithine aminotransferase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr14:133,808,193...133,830,517 JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr12:1,060,028...1,064,808
Ensembl chr12:1,060,568...1,064,809
JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr10:13,841,755...13,845,900 JBrowse link
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
UniProt
GO_Central
UniProt
PMID:21873635 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:959,709...964,195
Ensembl chr 4:959,708...964,195
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:64,336,354...64,445,669
Ensembl chr 9:64,336,499...64,445,663
JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATCAY ATCAY kinesin light chain interacting caytaxin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:74,800,048...74,838,923
Ensembl chr 2:74,800,048...74,838,671
JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,288...83,684,604
JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,288...83,684,604
JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr14:107,174,062...107,221,373
Ensembl chr14:107,170,689...107,221,215
JBrowse link
G NOXRED1 NADP dependent oxidoreductase domain containing 1 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 7:100,458,164...100,482,053
Ensembl chr 7:100,464,467...100,510,095
JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA InterPro
Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr12:1,060,028...1,064,808
Ensembl chr12:1,060,568...1,064,809
JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in IEA InterPro
Ensembl
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr10:13,841,755...13,845,900 JBrowse link
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 4:959,709...964,195
Ensembl chr 4:959,708...964,195
JBrowse link
G VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 7:100,482,953...100,510,164
Ensembl chr 7:100,462,773...100,506,302
JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,929,215...41,950,633
JBrowse link
G LOC110256626 proline dehydrogenase 1, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr14:51,624,919...51,644,467 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 6:45,213,712...45,240,437 JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 involved_in IEA UniProt
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 6:77,373,999...77,404,015
Ensembl chr 6:77,373,999...77,393,651
JBrowse link
G LOC110256626 proline dehydrogenase 1, mitochondrial involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:51,624,919...51,644,467 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:45,213,712...45,240,437 JBrowse link
proline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:77,373,999...77,404,015
Ensembl chr 6:77,373,999...77,393,651
JBrowse link
G LOC110256626 proline dehydrogenase 1, mitochondrial involved_in IEA UniProt GO_REF:0000043 NCBI chr14:51,624,919...51,644,467 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:45,213,712...45,240,437 JBrowse link
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGMAT agmatinase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 6:74,773,359...74,784,486
Ensembl chr 6:74,773,324...74,784,468
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:18,433,564...18,450,296
Ensembl chr 3:18,433,559...18,450,293
JBrowse link
regulation of arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FH fumarate hydratase involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr10:12,404,143...12,431,843
Ensembl chr10:12,404,176...12,431,801
JBrowse link
G SLC7A7 solute carrier family 7 member 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3760035|PMID:17376816) MGI
Ensembl
PMID:17376816 GO_REF:0000107 MGI:3760035 NCBI chr 7:76,195,774...76,235,406
Ensembl chr 7:76,144,113...76,236,873
JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway ISO RGD PMID:19858196 RGD:6484536 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,912
JBrowse link
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5562570|PMID:24548853)
(MGI:4948153|PMID:21490221), (MGI:5616960|PMID:25429150)
Ensembl
Ensembl
MGI
PMID:21490221 PMID:24548853 PMID:25429150 GO_REF:0000107 MGI:4948153 MGI:5562570 MGI:5616960 NCBI chr 8:88,608,083...88,690,589
Ensembl chr 8:88,607,884...88,940,100
JBrowse link
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIRT4 sirtuin 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:40,290,288...40,303,887
Ensembl chr14:40,286,955...40,303,888
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17278
    metabolic process 10891
      primary metabolic process 9710
        cellular amino acid metabolic process 279
          alpha-amino acid metabolic process 199
            glutamine family amino acid metabolic process 76
              arginine metabolic process + 19
              glutamate metabolic process + 34
              glutamine family amino acid biosynthetic process + 17
              glutamine family amino acid catabolic process + 23
              glutamine metabolic process + 25
              proline metabolic process + 11
              regulation of glutamine family amino acid metabolic process + 9
Path 2
Term Annotations click to browse term
  biological_process 17278
    metabolic process 10891
      cellular metabolic process 9229
        organic acid metabolic process 909
          oxoacid metabolic process 899
            carboxylic acid metabolic process 882
              cellular amino acid metabolic process 279
                alpha-amino acid metabolic process 199
                  glutamine family amino acid metabolic process 76
                    arginine metabolic process + 19
                    glutamate metabolic process + 34
                    glutamine family amino acid biosynthetic process + 17
                    glutamine family amino acid catabolic process + 23
                    glutamine metabolic process + 25
                    proline metabolic process + 11
                    regulation of glutamine family amino acid metabolic process + 9
paths to the root