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ONTOLOGY REPORT - ANNOTATIONS


Term:glutamine family amino acid metabolic process
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Accession:GO:0009064 term browser browse the term
Definition:The chemical reactions and pathways involving amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.
Synonyms:exact_synonym: glutamine family amino acid metabolism



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ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase acts_upstream_of_or_within IMP (MGI:3604426|PMID:12559843) MGI PMID:12559843 MGI:3604426 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Glul glutamate-ammonia ligase (glutamine synthetase) involved_in ISO RGD
MGI
PMID:28323 GO_REF:0000096 MGI:4417868 RGD:2301547 NCBI chr 1:153,775,675...153,785,469
Ensembl chr 1:153,775,690...153,785,469
JBrowse link
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in ISO
IMP
(MGI:5305859|PMID:22081021) MGI
UniProt
PMID:22081021 GO_REF:0000096 MGI:4834177 MGI:5305859 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Ass1 argininosuccinate synthetase 1 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
RGD
GO_Central
PMID:12470967 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:4834177 MGI:6201960 RGD:631755 NCBI chr 2:31,360,282...31,410,682
Ensembl chr 2:31,360,219...31,410,684
JBrowse link
G Nags N-acetylglutamate synthase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:102,036,339...102,040,354
Ensembl chr11:102,036,339...102,040,303
JBrowse link
G Otc ornithine transcarbamylase acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr  X:10,118,500...10,187,263
Ensembl chr  X:10,118,544...10,187,263
JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Otc ornithine transcarbamylase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:10,118,500...10,187,263
Ensembl chr  X:10,118,544...10,187,263
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:145,464,447...145,600,032
Ensembl chr 3:145,464,430...145,600,032
JBrowse link
G Ddah2 dimethylarginine dimethylaminohydrolase 2 acts_upstream_of_or_within ISA (MGI:1346392|PMID:10493931) MGI PMID:10493931 MGI:1346392 NCBI chr17:35,278,011...35,281,075
Ensembl chr17:35,278,011...35,281,071
JBrowse link
G Fah fumarylacetoacetate hydrolase acts_upstream_of_or_within IMP (MGI:1929783|PMID:11209059) MGI PMID:11209059 MGI:1929783 NCBI chr 7:84,234,367...84,255,150
Ensembl chr 7:84,234,367...84,255,930
JBrowse link
G Nos1 nitric oxide synthase 1, neuronal involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 NCBI chr 5:118,004,904...118,096,905
Ensembl chr 5:117,919,097...118,096,905
JBrowse link
G Nos2 nitric oxide synthase 2, inducible involved_in IBA
IDA
ISO
(MGI:6201960|PMID:21873635)
(MGI:3807772|PMID:1383204)
GO_Central
BHF-UCL
MGI
PMID:1383204 PMID:21873635 GO_REF:0000096 MGI:3807772 MGI:4834177 MGI:6201960 NCBI chr11:78,811,613...78,851,052
Ensembl chr11:78,811,613...78,851,080
JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:132,159,204...132,178,127
Ensembl chr 7:132,159,207...132,178,127
JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase, liver involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
RGD
MGI
PMID:15753084 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:8693655 NCBI chr10:24,791,105...24,803,368
Ensembl chr10:24,791,119...24,803,382
JBrowse link
G Arg2 arginase type II involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
RGD
PMID:15753084 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:8693655 NCBI chr12:79,177,562...79,203,075
Ensembl chr12:79,177,551...79,203,075
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:132,159,204...132,178,127
Ensembl chr 7:132,159,207...132,178,127
JBrowse link
arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase, liver involved_in ISO MGI
RGD
PMID:4062872 GO_REF:0000096 MGI:4417868 RGD:2300098 NCBI chr10:24,791,105...24,803,368
Ensembl chr10:24,791,119...24,803,382
JBrowse link
G Arg2 arginase type II involved_in ISO RGD
MGI
PMID:16537391 GO_REF:0000096 MGI:4417868 RGD:1582129 NCBI chr12:79,177,562...79,203,075
Ensembl chr12:79,177,551...79,203,075
JBrowse link
G Asl argininosuccinate lyase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
RGD
MGI
PMID:17322279 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:1625578 NCBI chr 3:145,464,447...145,600,032
Ensembl chr 3:145,464,430...145,600,032
JBrowse link
G Ddah2 dimethylarginine dimethylaminohydrolase 2 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
RGD
PMID:17322279 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:1625578 NCBI chr17:35,278,011...35,281,075
Ensembl chr17:35,278,011...35,281,071
JBrowse link
G Slc39a8 solute carrier family 39 (metal ion transporter), member 8 acts_upstream_of IMP (MGI:5912781|PMID:28481222) UniProt PMID:28481222 MGI:5912781 NCBI chr 3:135,522,644...135,594,333
Ensembl chr 3:135,531,040...135,594,333
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase like 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000008 GO_REF:0000096 MGI:2154458 MGI:4417868 MGI:4834177 MGI:6201960 NCBI chr19:9,089,083...9,112,930
Ensembl chr19:9,087,232...9,113,000
JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in IBA
ISO
IDA
(MGI:6201960|PMID:21873635)
(MGI:5320252|PMID:22228304)
GO_Central
MGI
UniProt
PMID:21873635 PMID:22228304 GO_REF:0000096 MGI:4834177 MGI:5320252 MGI:6201960 NCBI chr 1:52,202,608...52,274,168
Ensembl chr 1:52,202,607...52,272,391
JBrowse link
G Gls2 glutaminase 2 (liver, mitochondrial) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:128,030,504...128,045,873
Ensembl chr10:128,030,326...128,045,873
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr14:34,032,684...34,066,990
Ensembl chr14:34,032,684...34,067,222
JBrowse link
G Slc25a12 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 involved_in ISO RGD
MGI
PMID:19764902 GO_REF:0000096 MGI:4417868 RGD:13628741 NCBI chr 2:71,104,614...71,198,125
Ensembl chr 2:71,101,407...71,198,093
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad1 glutamate decarboxylase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:70,391,644...70,432,358
Ensembl chr 2:70,383,416...70,432,358
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:34,032,684...34,066,990
Ensembl chr14:34,032,684...34,067,222
JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1, soluble acts_upstream_of_or_within
involved_in
IDA
ISO
(MGI:53641|PMID:4193185) MGI
RGD
PMID:4193185 PMID:16489927 GO_REF:0000096 MGI:4417868 MGI:53641 RGD:13504861 NCBI chr19:43,488,191...43,514,743
Ensembl chr19:43,488,191...43,513,044
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial acts_upstream_of_or_within
involved_in
IDA
ISO
(MGI:53641|PMID:4193185) MGI
RGD
PMID:4193185 PMID:16489927 GO_REF:0000096 MGI:4417868 MGI:53641 RGD:13504861 NCBI chr 8:96,590,761...96,615,029
Ensembl chr 8:96,590,762...96,615,175
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1, soluble acts_upstream_of_or_within IDA (MGI:53641|PMID:4193185) MGI PMID:4193185 MGI:53641 NCBI chr19:43,488,191...43,514,743
Ensembl chr19:43,488,191...43,513,044
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial acts_upstream_of_or_within IDA (MGI:53641|PMID:4193185) MGI PMID:4193185 MGI:53641 NCBI chr 8:96,590,761...96,615,029
Ensembl chr 8:96,590,762...96,615,175
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:9,618,173...9,648,195
Ensembl chr 1:9,618,173...9,650,898
JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamic acid decarboxylase 2 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) RGD
GO_Central
MGI
PMID:8999827 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:1625237 NCBI chr 2:22,512,262...22,583,889
Ensembl chr 2:22,512,217...22,583,886
JBrowse link
glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:60,958,877...60,998,711
Ensembl chr 8:60,958,966...60,998,711
JBrowse link
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:40,538,701...40,576,907
Ensembl chr19:40,538,701...40,576,907
JBrowse link
G Aldh5a1 aldhehyde dehydrogenase family 5, subfamily A1 acts_upstream_of_or_within IMP (MGI:3767902|PMID:17854388) MGI PMID:17854388 MGI:3767902 NCBI chr13:25,091,562...25,121,740
Ensembl chr13:25,091,562...25,121,644
JBrowse link
G Dglucy D-glutamate cyclase involved_in IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:5901965|PMID:28266638)
GO_Central
UniProt
PMID:21873635 PMID:28266638 MGI:5901965 MGI:6201960 NCBI chr12:100,745,316...100,838,869
Ensembl chr12:100,745,316...100,863,240
JBrowse link
G Fpgs folylpolyglutamyl synthetase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:32,572,621...32,594,208
Ensembl chr 2:32,572,621...32,594,157
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:77,661,817...77,701,771
Ensembl chr 9:77,661,817...77,701,767
JBrowse link
G Gclm glutamate-cysteine ligase, modifier subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:122,039,206...122,060,864
Ensembl chr 3:122,039,206...122,064,381
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:21447318), (PMID:24047895) UniProt PMID:21447318 PMID:24047895 NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034
JBrowse link
G Glul glutamate-ammonia ligase (glutamine synthetase) involved_in ISO RGD
MGI
PMID:4403443 GO_REF:0000096 MGI:4417868 RGD:2301548 NCBI chr 1:153,775,675...153,785,469
Ensembl chr 1:153,775,690...153,785,469
JBrowse link
G Mthfs 5, 10-methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) BHF-UCL PMID:12764149 NCBI chr 9:89,093,243...89,122,278
Ensembl chr 9:89,092,729...89,259,766
JBrowse link
G Nags N-acetylglutamate synthase acts_upstream_of_or_within
involved_in
IDA
IBA
(MGI:2388220|PMID:12049647)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:12049647 PMID:21873635 MGI:2388220 MGI:6201960 NCBI chr11:102,036,339...102,040,354
Ensembl chr11:102,036,339...102,040,303
JBrowse link
G Tat tyrosine aminotransferase involved_in IDA
ISO
(MGI:5430853|PMID:21153519) UniProt
MGI
PMID:21153519 GO_REF:0000096 MGI:4834177 MGI:5430853 NCBI chr 8:110,712,710...110,726,436
Ensembl chr 8:110,717,069...110,726,435
JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase (glutamine synthetase) involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
RGD
PMID:28323 PMID:4403443 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:2301547 RGD:2301548 NCBI chr 1:153,775,675...153,785,469
Ensembl chr 1:153,775,690...153,785,469
JBrowse link
G Lgsn lengsin, lens protein with glutamine synthetase domain NOT|involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:31,215,362...31,243,806
Ensembl chr 1:31,215,482...31,243,806
JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in
acts_upstream_of_or_within
IDA
IMP
ISO
IBA
(MGI:5320252|PMID:22228304)
(MGI:3623875|PMID:16641247)
(MGI:6201960|PMID:21873635)
UniProt
MGI
GO_Central
PMID:16641247 PMID:21873635 PMID:22228304 GO_REF:0000096 MGI:3623875 MGI:4834177 MGI:5320252 MGI:6201960 NCBI chr 1:52,202,608...52,274,168
Ensembl chr 1:52,202,607...52,272,391
JBrowse link
G Gls2 glutaminase 2 (liver, mitochondrial) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:128,030,504...128,045,873
Ensembl chr10:128,030,326...128,045,873
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO MGI
RGD
PMID:8463258 GO_REF:0000096 MGI:4417868 RGD:633710 NCBI chr 5:77,061,096...77,099,425
Ensembl chr 5:77,061,096...77,099,425
JBrowse link
glutamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adssl1 adenylosuccinate synthetase like 1 ISO RGD PMID:12522136 RGD:5135508 NCBI chr12:112,586,481...112,607,789
Ensembl chr12:112,586,479...112,607,794
JBrowse link
G Asns asparagine synthetase acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 6:7,675,165...7,693,209
Ensembl chr 6:7,675,169...7,693,254
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
RGD
PMID:2474281 PMID:2803258 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:10755425 RGD:5132588 NCBI chr 5:31,211,964...31,235,823
Ensembl chr 5:31,212,124...31,235,823
JBrowse link
G Cps1 carbamoyl-phosphate synthetase 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:67,151,294...67,270,426
Ensembl chr 1:67,162,185...67,270,418
JBrowse link
G Ctps cytidine 5'-triphosphate synthase acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 4:120,397,065...120,427,473
Ensembl chr 4:120,397,065...120,427,473
JBrowse link
G Ctps2 cytidine 5'-triphosphate synthase 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr  X:161,684,264...161,817,537
Ensembl chr  X:161,684,234...161,815,504
JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 6:87,019,828...87,069,189
Ensembl chr 6:87,019,828...87,069,179
JBrowse link
G Gfpt2 glutamine fructose-6-phosphate transaminase 2 acts_upstream_of_or_within TAS (MGI:86910|PMID:9060444) MGI PMID:9060444 MGI:86910 NCBI chr11:49,684,981...49,729,448
Ensembl chr11:49,685,005...49,729,440
JBrowse link
G Gls glutaminase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 1:52,202,608...52,274,168
Ensembl chr 1:52,202,607...52,272,391
JBrowse link
G Gls2 glutaminase 2 (liver, mitochondrial) involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:128,030,504...128,045,873
Ensembl chr10:128,030,326...128,045,873
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in IMP (MGI:5499916|PMID:23663782) UniProt PMID:23663782 MGI:5499916 NCBI chr14:34,032,684...34,066,990
Ensembl chr14:34,032,684...34,067,222
JBrowse link
G Gmps guanine monophosphate synthetase acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 3:63,871,054...63,928,975
Ensembl chr 3:63,883,527...63,930,000
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IMP (MGI:3769075|PMID:17237885) MGI PMID:17237885 MGI:3769075 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,178,969
JBrowse link
G Nit2 nitrilase family, member 2 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr16:56,977,028...56,987,695
Ensembl chr16:56,977,028...56,987,704
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) involved_in ISO RGD
MGI
PMID:3436958 GO_REF:0000096 MGI:4417868 RGD:1599004 NCBI chr11:68,876,527...68,899,286
Ensembl chr11:68,876,523...68,899,286
JBrowse link
G Phgdh 3-phosphoglycerate dehydrogenase acts_upstream_of_or_within IMP (MGI:3835979|PMID:19114063) MGI PMID:19114063 MGI:3835979 NCBI chr 3:98,220,487...98,247,285
Ensembl chr 3:98,220,486...98,247,306
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 5:77,061,096...77,099,425
Ensembl chr 5:77,061,096...77,099,425
JBrowse link
G Sirt4 sirtuin 4 involved_in IMP (MGI:5490691|PMID:23562301), (MGI:5499916|PMID:23663782) UniProt PMID:23562301 PMID:23663782 MGI:5490691 MGI:5499916 NCBI chr 5:115,616,065...115,628,322
Ensembl chr 5:115,616,069...115,622,784
JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:93,359,200...93,375,973
Ensembl chr10:93,359,200...93,375,895
JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Noxred1 NADP+ dependent oxidoreductase domain containing 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr12:87,267,897...87,285,375
Ensembl chr12:87,267,814...87,285,506
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:120,527,591...120,534,602
Ensembl chr11:120,526,538...120,534,595
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase family, member 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:180,731,839...180,735,653
Ensembl chr 1:180,731,858...180,735,653
JBrowse link
G Pycrl pyrroline-5-carboxylate reductase-like involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr15:75,788,312...75,793,409
Ensembl chr15:75,788,326...75,793,409
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase, Ca++ transporting, plasma membrane 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:133,630,411...133,728,797
Ensembl chr 1:133,627,195...133,728,779
JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atcay ataxia, cerebellar, Cayman type involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:81,040,338...81,067,037
Ensembl chr10:81,040,342...81,066,667
JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IMP (MGI:5306122|PMID:21757002) BHF-UCL PMID:21757002 MGI:5306122 NCBI chr10:89,290,096...89,369,484
Ensembl chr10:89,290,096...89,369,447
JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IMP (MGI:5306122|PMID:21757002) BHF-UCL PMID:21757002 MGI:5306122 NCBI chr10:89,290,096...89,369,484
Ensembl chr10:89,290,096...89,369,447
JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:40,538,701...40,576,907
Ensembl chr19:40,538,701...40,576,907
JBrowse link
G Noxred1 NADP+ dependent oxidoreductase domain containing 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr12:87,267,897...87,285,375
Ensembl chr12:87,267,814...87,285,506
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:120,527,591...120,534,602
Ensembl chr11:120,526,538...120,534,595
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase family, member 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:180,731,839...180,735,653
Ensembl chr 1:180,731,858...180,735,653
JBrowse link
G Pycrl pyrroline-5-carboxylate reductase-like involved_in
acts_upstream_of_or_within
IEA UniProt GO_REF:0000002 GO_REF:0000004 MGI:1354194 MGI:2152098 NCBI chr15:75,788,312...75,793,409
Ensembl chr15:75,788,326...75,793,409
JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 5:114,137,696...114,163,736
Ensembl chr 5:114,141,764...114,163,743
JBrowse link
G Prodh proline dehydrogenase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr16:17,889,590...17,907,148
Ensembl chr16:17,878,221...17,908,067
JBrowse link
G Prodh2 proline dehydrogenase (oxidase) 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 7:30,193,011...30,212,827
Ensembl chr 7:30,193,047...30,212,827
JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:139,348,404...139,377,002
Ensembl chr 4:139,350,177...139,377,001
JBrowse link
G Prodh proline dehydrogenase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr16:17,889,590...17,907,148
Ensembl chr16:17,878,221...17,908,067
JBrowse link
G Prodh2 proline dehydrogenase (oxidase) 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:30,193,011...30,212,827
Ensembl chr 7:30,193,047...30,212,827
JBrowse link
proline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 4:139,348,404...139,377,002
Ensembl chr 4:139,350,177...139,377,001
JBrowse link
G Prodh proline dehydrogenase acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr16:17,889,590...17,907,148
Ensembl chr16:17,878,221...17,908,067
JBrowse link
G Prodh2 proline dehydrogenase (oxidase) 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 7:30,193,011...30,212,827
Ensembl chr 7:30,193,047...30,212,827
JBrowse link
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatine ureohydrolase (agmatinase) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:141,473,986...141,486,574
Ensembl chr 4:141,473,983...141,486,574
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) involved_in IMP (MGI:4830440|PMID:19284480) UniProt PMID:19284480 MGI:4830440 NCBI chr 7:126,170,379...126,184,989
Ensembl chr 7:126,170,379...126,184,989
JBrowse link
regulation of arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh1 fumarate hydratase 1 involved_in IMP (MGI:5496931|PMID:23643539) UniProt PMID:23643539 MGI:5496931 NCBI chr 1:175,428,944...175,453,201
Ensembl chr 1:175,427,940...175,453,201
JBrowse link
G Slc7a7 solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 acts_upstream_of_or_within
involved_in
IMP
IBA
(MGI:3760035|PMID:17376816)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:17376816 PMID:21873635 MGI:3760035 MGI:6201960 NCBI chr14:54,606,899...54,657,525
Ensembl chr14:54,606,899...54,655,237
JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC, WNT signaling pathway regulator involved_in ISO RGD
MGI
PMID:19858196 GO_REF:0000096 MGI:4417868 RGD:6484536 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605
JBrowse link
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 acts_upstream_of_or_within IMP (MGI:4948153|PMID:21490221), (MGI:5616960|PMID:25429150)
(MGI:5562570|PMID:24548853)
MGI PMID:21490221 PMID:24548853 PMID:25429150 MGI:4948153 MGI:5562570 MGI:5616960 NCBI chr 3:50,319,385...50,403,947
Ensembl chr 3:49,846,975...50,398,063
JBrowse link
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt4 sirtuin 4 involved_in IMP (MGI:5490691|PMID:23562301) CACAO PMID:23562301 MGI:5490691 NCBI chr 5:115,616,065...115,628,322
Ensembl chr 5:115,616,069...115,622,784
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28739
    metabolic process 11540
      primary metabolic process 10285
        cellular amino acid metabolic process 266
          alpha-amino acid metabolic process 188
            glutamine family amino acid metabolic process 69
              arginine metabolic process + 19
              glutamate metabolic process + 31
              glutamine family amino acid biosynthetic process + 16
              glutamine family amino acid catabolic process + 24
              glutamine metabolic process + 22
              proline metabolic process + 10
              regulation of glutamine family amino acid metabolic process + 9
Path 2
Term Annotations click to browse term
  biological_process 28739
    metabolic process 11540
      cellular metabolic process 9711
        organic acid metabolic process 1019
          oxoacid metabolic process 1009
            carboxylic acid metabolic process 987
              cellular amino acid metabolic process 266
                alpha-amino acid metabolic process 188
                  glutamine family amino acid metabolic process 69
                    arginine metabolic process + 19
                    glutamate metabolic process + 31
                    glutamine family amino acid biosynthetic process + 16
                    glutamine family amino acid catabolic process + 24
                    glutamine metabolic process + 22
                    proline metabolic process + 10
                    regulation of glutamine family amino acid metabolic process + 9
paths to the root