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ONTOLOGY REPORT - ANNOTATIONS

Term:aerobic respiration
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Accession:GO:0009060 term browser browse the term
Definition:The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.
Synonyms:xref: MetaCyc:PWY-3781;   Wikipedia:Cellular_respiration#Aerobic_respiration


show annotations for term's descendants           Sort by:
aerobic respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase ISO RGD PMID:3777158 RGD:1598765 NCBI chr22:21,249,920...21,271,749
Ensembl chr22:39,068,764...39,389,221 		JBrowse link
G ATP5F1D ATP synthase F1 subunit delta involved_in ISO (PMID:29478781) UniProt PMID:29478781
G BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 involved_in ISO (PMID:22309213) UniProt PMID:22309213 NCBI chr12:33,191,882...33,195,566
Ensembl chr12:33,911,309...33,920,506 		JBrowse link
G CAT catalase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15178682) Ensembl
MGI		 PMID:15178682 GO_REF:0000107 NCBI chr11:34,413,253...34,446,831
Ensembl chr11:34,289,603...34,323,160 		JBrowse link
G COX1 cytochrome c oxidase subunit I involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:5,322...6,863
Ensembl chr MT:5,322...6,863 		JBrowse link
G FXN frataxin acts_upstream_of_or_within ISO (PMID:16278235)
(PMID:9405681)		 MGI PMID:9405681 PMID:16278235 NCBI chr 9:55,690,483...55,754,755
Ensembl chr 9:67,800,579...67,866,031 		JBrowse link
G LOC100980340 protoheme IX farnesyltransferase, mitochondrial involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16782876) Ensembl
MGI		 PMID:16782876 GO_REF:0000107 NCBI chr17:37,443,319...37,582,436
Ensembl chr17:42,091,452...42,274,762 		JBrowse link
G MDH2 malate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:67,953,759...67,973,270
Ensembl chr 7:82,497,800...82,516,526 		JBrowse link
G MFN2 mitofusin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,729,933...10,764,865
Ensembl chr 1:11,945,880...11,981,077 		JBrowse link
G MTFR1 mitochondrial fission regulator 1 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:62,184,249...62,265,239
Ensembl chr 8:63,853,944...63,933,929 		JBrowse link
G MTFR1L mitochondrial fission regulator 1 like involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr 1:25,078,463...25,091,546
Ensembl chr 1:26,145,924...26,158,980 		JBrowse link
G MTFR2 mitochondrial fission regulator 2 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:133,995,679...134,014,947
Ensembl chr 6:138,084,908...138,104,740 		JBrowse link
G ND1 NADH dehydrogenase subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr MT:2,727...3,681 JBrowse link
G ND4 NADH dehydrogenase subunit 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr MT:10,179...11,556
Ensembl chr MT:10,179...11,556 		JBrowse link
G NDUFS7 NADH:ubiquinone oxidoreductase core subunit S7 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr19:1,357,389...1,369,539 JBrowse link
G OXA1L OXA1L mitochondrial inner membrane protein involved_in ISO (PMID:7991568) UniProt PMID:7991568 NCBI chr14:3,584,220...3,589,360
Ensembl chr14:21,683,983...21,689,101 		JBrowse link
G PANK2 pantothenate kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22983956) Ensembl
MGI		 PMID:22983956 GO_REF:0000107 NCBI chr20:3,924,054...3,959,393
Ensembl chr20:3,723,211...3,757,748 		JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:15,962,383...15,998,056
Ensembl chr 1:17,018,542...17,054,509 		JBrowse link
G SIRT3 sirtuin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:210,052...233,969
Ensembl chr11:255,191...278,732 		JBrowse link
G UCN urocortin ISO negative regulation RGD PMID:11597609 RGD:5508185 NCBI chr2A:27,309,458...27,311,268
Ensembl chr2A:27,397,295...27,397,669 		JBrowse link
aerobic electron transport chain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COX3 cytochrome c oxidase subunit III involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:8,626...9,409
Ensembl chr MT:8,626...9,409 		JBrowse link
G SLC25A51 solute carrier family 25 member 51 acts_upstream_of
involved_in		 ISO (PMID:33262325)
(PMID:33087354)		 UniProt PMID:33087354 PMID:33262325 NCBI chr 9:37,709,303...37,756,717 JBrowse link
ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COX2 cytochrome c oxidase subunit II involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr MT:7,004...7,687
Ensembl chr MT:7,004...7,687 		JBrowse link
G ND4 NADH dehydrogenase subunit 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:10,179...11,556
Ensembl chr MT:10,179...11,556 		JBrowse link
G ND4L NADH dehydrogenase subunit 4L involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr MT:9,889...10,185
Ensembl chr MT:9,889...10,185 		JBrowse link
G ND5 NADH dehydrogenase subunit 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:11,756...13,567
Ensembl chr MT:11,756...13,567 		JBrowse link
G NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:7,597,055...7,607,149
Ensembl chr19:8,448,211...8,458,270 		JBrowse link
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA InterPro GO_REF:0000002 NCBI chr2B:93,363,092...93,399,326
Ensembl chr2B:211,493,021...211,528,496 		JBrowse link
mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BID BH3 interacting domain death agonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26219591) Ensembl
MGI		 PMID:26219591 GO_REF:0000107 NCBI chr22:1,164,787...1,205,051
Ensembl chr22:16,594,186...16,632,844 		JBrowse link
G COQ7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (PMID:18635541) MGI PMID:18635541 NCBI chr16:19,229,649...19,242,131
Ensembl chr16:19,172,135...19,184,158 		JBrowse link
G DGUOK deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chr2A:74,000,969...74,032,993
Ensembl chr2A:75,510,768...75,542,563 		JBrowse link
G LOC100973340 cytochrome c oxidase assembly factor 6 homolog involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:209,913,610...209,914,929
Ensembl chr 1:214,934,998...214,944,496 		JBrowse link
G MTCH2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (PMID:26219591) MGI PMID:26219591 NCBI chr11:47,566,884...47,596,711
Ensembl chr11:48,115,774...48,146,312 		JBrowse link
G NDUFA12 NADH:ubiquinone oxidoreductase subunit A12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:92,557,630...92,594,947
Ensembl chr12:95,953,491...95,989,618 		JBrowse link
G NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:32,327,973...32,347,518
Ensembl chr 9:33,137,836...33,157,006 		JBrowse link
G NDUFS2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,609,822...136,626,851
Ensembl chr 1:140,526,690...140,538,705 		JBrowse link
G NDUFV1 NADH:ubiquinone oxidoreductase core subunit V1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,964,970...62,970,605
Ensembl chr11:66,276,638...66,282,320 		JBrowse link
G NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:29,205,714...29,222,057
Ensembl chr21:42,516,295...42,531,750 		JBrowse link
G SNCA synuclein alpha acts_upstream_of_or_within ISO (PMID:16260631) MGI PMID:16260631 NCBI chr 4:82,018,585...82,132,938
Ensembl chr 4:92,737,608...92,850,600 		JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,853,054...143,863,491
Ensembl chr  X:153,725,294...153,734,046 		JBrowse link
mitochondrial electron transport, cytochrome c to oxygen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFG1L AFG1 like ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,097,263...106,326,453
Ensembl chr 6:109,956,916...110,367,328 		JBrowse link
G COX1 cytochrome c oxidase subunit I involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr MT:5,322...6,863
Ensembl chr MT:5,322...6,863 		JBrowse link
G COX3 cytochrome c oxidase subunit III involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr MT:8,626...9,409
Ensembl chr MT:8,626...9,409 		JBrowse link
G LOC100968761 cytochrome c oxidase subunit 7A-related protein, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr2A:42,447,387...42,461,792
Ensembl chr2A:43,299,759...43,319,617 		JBrowse link
G LOC100969626 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:33,281,675...33,282,259 JBrowse link
G LOC100969890 cytochrome c oxidase subunit 4 isoform 1, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr16:66,467,259...66,474,652
Ensembl chr16:85,805,611...85,812,851 		JBrowse link
G LOC100972878 cytochrome c oxidase subunit 5B, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr2A:101,675,232...101,677,417
Ensembl chr2A:98,544,980...98,547,502 		JBrowse link
G LOC100973061 cytochrome c oxidase subunit 7A1, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr19:33,069,878...33,071,835
Ensembl chr19:41,817,074...41,819,025 		JBrowse link
G LOC100974033 cytochrome c oxidase subunit 6A2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:23,537,864...23,538,675 JBrowse link
G LOC100975216 cytochrome c oxidase subunit 6A1, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:36,606,976...36,607,538 JBrowse link
G LOC100979972 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 5:28,763,336...28,766,369
Ensembl chr 5:28,898,380...28,901,243 		JBrowse link
G LOC100980404 cytochrome c oxidase subunit 4 isoform 2, mitochondrial involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr20:27,927,883...27,935,305
Ensembl chr20:29,061,447...29,067,440 		JBrowse link
G LOC100981677 cytochrome c oxidase subunit 7A2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:73,080,762...73,092,922
Ensembl chr 6:76,372,094...76,377,903 		JBrowse link
G LOC100982199 cytochrome c oxidase subunit 7B2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:75,248,761...75,419,165
Ensembl chr 4:86,148,780...86,149,025 		JBrowse link
G LOC100984553 cytochrome c oxidase subunit 8C, mitochondrial involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr14:73,979,629...73,984,116
Ensembl chr14:93,316,013...93,317,217 		JBrowse link
G LOC100986481 cytochrome c involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:10980192 GO_REF:0000118 RGD:2300408 NCBI chr 7:25,784,900...25,791,598
Ensembl chr 7:25,396,013...25,398,549 		JBrowse link
G LOC100986707 cytochrome c oxidase subunit 7B, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:67,082,551...67,088,492
Ensembl chr  X:77,194,757...77,200,532 		JBrowse link
G LOC100988094 cytochrome c oxidase subunit 5A, mitochondrial involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr15:53,860,721...53,878,699 JBrowse link
G LOC100994763 cytochrome c oxidase subunit 6C involved_in IEA UniProt GO_REF:0000104 NCBI chr 8:96,525,872...96,541,578
Ensembl chr 8:98,700,724...98,716,662 		JBrowse link
G LOC103783322 cytochrome c oxidase subunit 8A, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr11:59,331,536...59,333,496
Ensembl chr11:62,679,993...62,681,978 		JBrowse link
G LOC103783978 cytochrome c oxidase subunit 6A1, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:118,019,493...118,022,152
Ensembl chr12:121,393,917...121,396,561 		JBrowse link
G LOC103785895 cytochrome c involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:126,253,268...126,253,977 JBrowse link
G LOC106634335 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:143,391,767...143,393,222 JBrowse link
G LOC112441004 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 1:178,363,817...178,364,096 JBrowse link
G LOC117975808 cytochrome c involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:19,789,699...19,790,959 JBrowse link
G LOC134731223 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118
mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor ISO RGD PMID:15341590 RGD:1358393 NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239 		JBrowse link
G COQ9 coenzyme Q9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23255162) Ensembl
MGI		 PMID:23255162 GO_REF:0000107 NCBI chr16:37,723,452...37,737,327
Ensembl chr16:56,856,401...56,870,260 		JBrowse link
G DLD dihydrolipoamide dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15009635) Ensembl
MGI		 PMID:15009635 GO_REF:0000107 NCBI chr 7:99,872,020...99,901,884
Ensembl chr 7:112,593,934...112,623,629 		JBrowse link
G DNAJC15 DnaJ heat shock protein family (Hsp40) member C15 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:23530063) Ensembl
MGI		 PMID:23530063 GO_REF:0000107 NCBI chr13:24,193,185...24,276,813 JBrowse link
G LOC100976767 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:123,719,836...123,721,071 JBrowse link
G ND1 NADH dehydrogenase subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr MT:2,727...3,681 JBrowse link
G ND2 NADH dehydrogenase subunit 2 involved_in ISS
IEA		 UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 GO_REF:0000118 NCBI chr MT:3,890...4,933
Ensembl chr MT:3,890...4,933 		JBrowse link
G ND3 NADH dehydrogenase subunit 3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr MT:9,478...9,823
Ensembl chr MT:9,478...9,823 		JBrowse link
G ND4 NADH dehydrogenase subunit 4 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr MT:10,179...11,556
Ensembl chr MT:10,179...11,556 		JBrowse link
G ND5 NADH dehydrogenase subunit 5 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr MT:11,756...13,567
Ensembl chr MT:11,756...13,567 		JBrowse link
G ND6 NADH dehydrogenase subunit 6 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr MT:13,568...14,092
Ensembl chr MT:13,568...14,092 		JBrowse link
G NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24652937) Ensembl
MGI
TreeGrafter
InterPro		 PMID:24652937 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:127,204,900...127,269,478
Ensembl chr2B:246,022,168...246,087,658 		JBrowse link
G NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:7,597,055...7,607,149
Ensembl chr19:8,448,211...8,458,270 		JBrowse link
G NDUFA8 NADH:ubiquinone oxidoreductase subunit A8 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:93,268,929...93,284,704
Ensembl chr 9:121,610,091...121,625,688 		JBrowse link
G NDUFAF1 NADH:ubiquinone oxidoreductase complex assembly factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:20,326,486...20,341,156
Ensembl chr15:38,569,731...38,583,872 		JBrowse link
G NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:32,327,973...32,347,518
Ensembl chr 9:33,137,836...33,157,006 		JBrowse link
G NDUFB8 NADH:ubiquinone oxidoreductase subunit B8 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr10:97,123,826...97,129,919
Ensembl chr10:100,604,914...100,611,016 		JBrowse link
G NDUFB9 NADH:ubiquinone oxidoreductase subunit B9 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:121,223,857...121,234,743
Ensembl chr 8:123,975,910...123,986,781 		JBrowse link
G NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:73,128,457...73,140,344
Ensembl chr11:76,720,094...76,763,098 		JBrowse link
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:93,363,092...93,399,326
Ensembl chr2B:211,493,021...211,528,496 		JBrowse link
G NDUFS2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:136,609,822...136,626,851
Ensembl chr 1:140,526,690...140,538,705 		JBrowse link
G NDUFS3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,528,680...47,534,206
Ensembl chr11:48,078,332...48,083,863 		JBrowse link
G NDUFS6 NADH:ubiquinone oxidoreductase subunit S6 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:2,132,177...2,147,226
Ensembl chr 5:1,854,644...1,869,711 		JBrowse link
G NDUFS7 NADH:ubiquinone oxidoreductase core subunit S7 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr19:1,357,389...1,369,539 JBrowse link
G NDUFS8 NADH:ubiquinone oxidoreductase core subunit S8 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:63,112,536...63,118,600
Ensembl chr11:66,421,378...66,427,101 		JBrowse link
G NDUFV1 NADH:ubiquinone oxidoreductase core subunit V1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:62,964,970...62,970,605
Ensembl chr11:66,276,638...66,282,320 		JBrowse link
G NDUFV2 NADH:ubiquinone oxidoreductase core subunit V2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:5,154,158...5,186,088
Ensembl chr18:7,433,167...7,464,884 		JBrowse link
mitochondrial electron transport, succinate to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100979967 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:192,946,176...192,969,187
Ensembl chr 5:356,087...399,923
Ensembl chr 5:356,087...399,923 		JBrowse link
G SDHAF2 succinate dehydrogenase complex assembly factor 2 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr11:56,729,314...56,746,075
Ensembl chr11:60,093,656...60,110,288 		JBrowse link
G SDHC succinate dehydrogenase complex subunit C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:136,724,663...136,773,038
Ensembl chr 1:140,635,685...140,682,736 		JBrowse link
G TEX12 testis expressed 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:107,048,417...107,053,655
Ensembl chr11:110,817,016...110,896,829 		JBrowse link
mitochondrial electron transport, ubiquinol to cytochrome c term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYTB cytochrome b involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr MT:14,166...15,306
Ensembl chr MT:14,166...15,306 		JBrowse link
G LOC100968432 cytochrome b-c1 complex subunit 9 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr22:10,810,858...10,813,466
Ensembl chr22:28,615,583...28,618,426 		JBrowse link
G LOC100969626 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:33,281,675...33,282,259 JBrowse link
G LOC100974890 cytochrome b-c1 complex subunit Rieske, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:26,139,335...26,145,231
Ensembl chr19:34,905,765...34,911,712 		JBrowse link
G LOC100977575 cytochrome b-c1 complex subunit 1, mitochondrial involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16782889) Ensembl
MGI		 PMID:16782889 GO_REF:0000107 NCBI chr 3:48,520,870...48,531,947
Ensembl chr 3:49,602,770...49,613,717 		JBrowse link
G LOC100984974 cytochrome b-c1 complex subunit 6, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 1:45,606,924...45,619,811
Ensembl chr 1:46,961,538...46,975,055 		JBrowse link
G LOC100985683 cytochrome b-c1 complex subunit 7 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 8:92,856,055...92,860,697
Ensembl chr 8:95,053,170...95,058,311 		JBrowse link
G LOC100986481 cytochrome c involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:25,784,900...25,791,598
Ensembl chr 7:25,396,013...25,398,549 		JBrowse link
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
G LOC100990186 cytochrome b-c1 complex subunit 6, mitochondrial involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 1:14,949,053...14,949,605
Ensembl chr 1:15,942,435...15,942,716 		JBrowse link
G LOC100992200 cytochrome b-c1 complex subunit 7-like involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:155,649,206...155,649,906 JBrowse link
G LOC100995886 cytochrome c1, heme protein, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:140,861,432...140,863,900
Ensembl chr 8:143,853,354...143,855,847 		JBrowse link
G LOC103785895 cytochrome c involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:126,253,268...126,253,977 JBrowse link
G LOC106634335 cytochrome c-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:143,391,767...143,393,222 JBrowse link
G LOC117975808 cytochrome c involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:19,789,699...19,790,959 JBrowse link
G LOC134731237 ubiquinol-cytochrome-c reductase complex assembly factor 3 involved_in IEA TreeGrafter GO_REF:0000118
negative regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJC15 DnaJ heat shock protein family (Hsp40) member C15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23530063) Ensembl
MGI		 PMID:23530063 GO_REF:0000107 NCBI chr13:24,193,185...24,276,813 JBrowse link
negative regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429 		JBrowse link
G APOC3 apolipoprotein C3 ISO RGD PMID:11177239 RGD:1599177 NCBI chr11:111,667,816...111,670,861
Ensembl chr11:115,600,416...115,603,460 		JBrowse link
G MLXIPL MLX interacting protein like involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,745,765...80,776,153 JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISO (MGI:5294502|PMID:21724846) UniProt PMID:21724846 MGI:5294502 NCBI chr11:67,653,335...67,753,450
Ensembl chr11:70,875,552...70,975,322 		JBrowse link
G PPIF peptidylprolyl isomerase F involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:75,860,197...75,868,098
Ensembl chr10:78,521,642...78,530,202 		JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:8903396 RGD:14995471 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381 		JBrowse link
oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK2 adenylate kinase 2 ISO RGD PMID:18423391 RGD:5147997 NCBI chr 1:32,295,668...32,323,681
Ensembl chr 1:33,480,947...33,508,621 		JBrowse link
G C13H2orf69 chromosome 13 C2orf69 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:87,160,309...87,177,161
Ensembl chr2B:205,319,094...205,333,361 		JBrowse link
G CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10 involved_in ISO (PMID:20888800) BHF-UCL PMID:20888800 NCBI chr22:4,521,604...4,523,740 JBrowse link
G COX1 cytochrome c oxidase subunit I involved_in IEA UniProt GO_REF:0000041 NCBI chr MT:5,322...6,863
Ensembl chr MT:5,322...6,863 		JBrowse link
G FXN frataxin acts_upstream_of_or_within ISO (PMID:16278235)
(PMID:17404227)		 MGI PMID:16278235 PMID:17404227 NCBI chr 9:55,690,483...55,754,755
Ensembl chr 9:67,800,579...67,866,031 		JBrowse link
G LOC100969890 cytochrome c oxidase subunit 4 isoform 1, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr16:66,467,259...66,474,652
Ensembl chr16:85,805,611...85,812,851 		JBrowse link
G LOC100975216 cytochrome c oxidase subunit 6A1, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:36,606,976...36,607,538 JBrowse link
G LOC100979972 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:28,763,336...28,766,369
Ensembl chr 5:28,898,380...28,901,243 		JBrowse link
G LOC100980404 cytochrome c oxidase subunit 4 isoform 2, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr20:27,927,883...27,935,305
Ensembl chr20:29,061,447...29,067,440 		JBrowse link
G LOC100982199 cytochrome c oxidase subunit 7B2, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:75,248,761...75,419,165
Ensembl chr 4:86,148,780...86,149,025 		JBrowse link
G LOC100984553 cytochrome c oxidase subunit 8C, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr14:73,979,629...73,984,116
Ensembl chr14:93,316,013...93,317,217 		JBrowse link
G LOC100986707 cytochrome c oxidase subunit 7B, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:67,082,551...67,088,492
Ensembl chr  X:77,194,757...77,200,532 		JBrowse link
G LOC100988094 cytochrome c oxidase subunit 5A, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr15:53,860,721...53,878,699 JBrowse link
G LOC100994763 cytochrome c oxidase subunit 6C involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:96,525,872...96,541,578
Ensembl chr 8:98,700,724...98,716,662 		JBrowse link
G LOC103783322 cytochrome c oxidase subunit 8A, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr11:59,331,536...59,333,496
Ensembl chr11:62,679,993...62,681,978 		JBrowse link
G LOC103783978 cytochrome c oxidase subunit 6A1, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr12:118,019,493...118,022,152
Ensembl chr12:121,393,917...121,396,561 		JBrowse link
G LOC112441004 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:178,363,817...178,364,096 JBrowse link
G LOC134731223 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA UniProt GO_REF:0000041
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16805809) Ensembl
MGI		 PMID:16805809 GO_REF:0000107 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G NIPSNAP2 nipsnap homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:56,577,763...56,613,417
Ensembl chr 7:57,002,001...57,036,333 		JBrowse link
G TEFM transcription elongation factor, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:25,933,934...25,941,220
Ensembl chr17:25,423,956...25,432,198 		JBrowse link
plasma membrane ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100973340 cytochrome c oxidase assembly factor 6 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:209,913,610...209,914,929
Ensembl chr 1:214,934,998...214,944,496 		JBrowse link
positive regulation of mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNB1 cyclin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:44,826,103...44,836,832
Ensembl chr 5:46,394,362...46,405,332 		JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:57,314,692...57,331,261
Ensembl chr10:59,647,993...59,664,434 		JBrowse link
G CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:56,714,583...56,719,640
Ensembl chr 7:57,134,303...57,141,765 		JBrowse link
positive regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISCU iron-sulfur cluster assembly enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:106,132,987...106,140,879
Ensembl chr12:109,529,162...109,537,053 		JBrowse link
G PARK7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24652937) Ensembl
MGI		 PMID:24652937 GO_REF:0000107 NCBI chr 1:19,583,330...19,601,248
Ensembl chr 1:20,627,693...20,645,560 		JBrowse link
positive regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIMAP2 ciliary microtubule associated protein 2 acts_upstream_of_or_within ISO (PMID:25883318) MGI PMID:25883318 NCBI chr 1:54,081,853...54,118,848 JBrowse link
G GADD45GIP1 GADD45G interacting protein 1 acts_upstream_of_or_within ISO (PMID:25883318) MGI PMID:25883318 NCBI chr19:12,516,581...12,519,673
Ensembl chr19:13,259,047...13,262,044 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:18414044 RGD:10059611 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863 		JBrowse link
G MYOG myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chr 1:178,684,933...178,687,971
Ensembl chr 1:182,979,700...182,982,611 		JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:29,015,155...29,016,987 JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588 		JBrowse link
proton motive force-driven mitochondrial ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:39,366,384...39,380,514
Ensembl chr18:42,904,136...42,923,326 		JBrowse link
G ATP5F1B ATP synthase F1 subunit beta involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:32,264,570...32,272,419
Ensembl chr12:32,519,749...32,527,753 		JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:7,820,874...7,840,581
Ensembl chr10:7,801,438...7,821,088 		JBrowse link
G ATP5F1D ATP synthase F1 subunit delta involved_in ISO (PMID:12110673) UniProt PMID:12110673
G ATP5F1E ATP synthase F1 subunit epsilon involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:55,379,615...55,383,316
Ensembl chr20:56,740,739...56,744,431 		JBrowse link
G ATP5ME ATP synthase membrane subunit e involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 4:705,707...707,172 JBrowse link
G ATP5MF ATP synthase membrane subunit f involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:91,431,277...91,439,423
Ensembl chr 7:104,933,594...104,941,921 		JBrowse link
G ATP5MG ATP synthase membrane subunit g involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:113,236,010...113,243,661
Ensembl chr11:117,167,404...117,200,030 		JBrowse link
G ATP5PB ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr 1:114,110,749...114,122,715
Ensembl chr 1:126,224,725...126,235,897 		JBrowse link
G ATP5PD ATP synthase peripheral stalk subunit d involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:68,986,362...68,994,246
Ensembl chr17:74,541,363...74,549,700 		JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:12,169,567...12,180,717
Ensembl chr21:25,519,441...25,537,363 		JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP involved_in ISO (PMID:15850986) UniProt PMID:15850986 NCBI chr21:20,270,442...20,282,865 JBrowse link
G ATP6 ATP synthase F0 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr MT:7,946...8,626
Ensembl chr MT:7,946...8,626 		JBrowse link
G LOC100979323 ATP synthase subunit f, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:58,588,171...58,589,068 JBrowse link
G LOC103786147 ATP synthase subunit f, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:106,710,885...106,711,324 JBrowse link
G LOC134728860 ATP synthase subunit epsilon-like protein, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118
G STOML2 stomatin like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,950,387...34,953,707
Ensembl chr 9:35,755,790...35,759,091 		JBrowse link
regulation of aerobic respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO RGD PMID:24601882 RGD:39128160 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G ARL2 ADP ribosylation factor like GTPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,370,499...60,378,553
Ensembl chr11:63,710,622...63,719,103 		JBrowse link
G BNIP3 BCL2 interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:128,671,663...128,685,952
Ensembl chr10:132,858,211...132,871,634 		JBrowse link
G CBFA2T3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:69,592,293...69,662,321
Ensembl chr16:89,246,545...89,347,435 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885 		JBrowse link
G IDE insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:89,196,295...89,320,223
Ensembl chr10:92,716,540...92,833,353 		JBrowse link
G NOP53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:24556985) UniProt PMID:24556985 NCBI chr19:44,739,739...44,751,303 JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138 		JBrowse link
G TRPV4 transient receptor potential cation channel subfamily V member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:107,359,005...107,409,359
Ensembl chr12:110,754,238...110,786,182 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588 		JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANTKMT adenine nucleotide translocase lysine methyltransferase involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr16:733,726...735,794 JBrowse link
G ATPSCKMT ATP synthase c subunit lysine N-methyltransferase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:10,524,829...10,565,898
Ensembl chr 5:10,401,684...10,416,858 		JBrowse link
G DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,835,722...80,836,402 JBrowse link
regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424 		JBrowse link
G AK4 adenylate kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:64,394,898...64,479,536
Ensembl chr 1:66,283,102...66,361,230 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8550574) MGI PMID:8550574 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756 		JBrowse link
G LOC100968761 cytochrome c oxidase subunit 7A-related protein, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:42,447,387...42,461,792
Ensembl chr2A:43,299,759...43,319,617 		JBrowse link
G LOC100973061 cytochrome c oxidase subunit 7A1, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:33,069,878...33,071,835
Ensembl chr19:41,817,074...41,819,025 		JBrowse link
G LOC100974858 core histone macro-H2A.1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:130,727,065...130,791,932
Ensembl chr 5:136,868,521...136,933,834 		JBrowse link
G LOC100981677 cytochrome c oxidase subunit 7A2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:73,080,762...73,092,922
Ensembl chr 6:76,372,094...76,377,903 		JBrowse link
G LOC100982351 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,270,785...33,284,931
Ensembl chr 6:34,379,212...34,393,373 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:19,583,330...19,601,248
Ensembl chr 1:20,627,693...20,645,560 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138 		JBrowse link
G SLC25A23 solute carrier family 25 member 23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23344948) Ensembl
MGI		 PMID:23344948 GO_REF:0000107 NCBI chr19:5,474,538...5,487,364
Ensembl chr19:6,388,937...6,410,480 		JBrowse link
G SLC25A33 solute carrier family 25 member 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,300,384...8,343,270
Ensembl chr 1:9,541,918...9,574,549 		JBrowse link
G TMEM135 transmembrane protein 135 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:33064130) Ensembl
MGI		 PMID:33064130 GO_REF:0000107 NCBI chr11:82,089,010...82,360,744
Ensembl chr11:85,696,632...85,966,778 		JBrowse link
tricarboxylic acid cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACO1 aconitase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:32,157,763...32,225,116
Ensembl chr 9:32,967,993...33,035,177 		JBrowse link
G ACO2 aconitase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:9630632) RGD
TreeGrafter
Ensembl
InterPro
UniProt
MGI		 PMID:9630632 PMID:9712727 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 RGD:2306877 NCBI chr22:22,363,178...22,423,041
Ensembl chr22:40,450,276...40,510,200 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23437220) Ensembl
MGI		 PMID:23437220 GO_REF:0000107 NCBI chr21:32,322,185...32,346,850
Ensembl chr21:45,584,096...45,607,240 		JBrowse link
G CS citrate synthase involved_in IEA
ISO		 UniProt
InterPro
RGD
TreeGrafter		 PMID:9712727 GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 RGD:2306877 NCBI chr12:32,614,982...32,643,719
Ensembl chr12:32,867,225...32,895,854 		JBrowse link
G DHTKD1 dehydrogenase E1 and transketolase domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:12,073,324...12,130,589
Ensembl chr10:12,054,060...12,108,387 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr14:55,433,358...55,455,876
Ensembl chr14:74,278,128...74,300,133 		JBrowse link
G FH fumarate hydratase involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:217,059,847...217,081,795
Ensembl chr 1:222,041,142...222,064,212 		JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr2B:95,475,320...95,494,286
Ensembl chr2B:213,599,036...213,617,175 		JBrowse link
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:68,771,050...68,790,523
Ensembl chr15:87,972,889...87,991,276 		JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in IEA UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr15:57,078,588...57,099,934
Ensembl chr15:76,043,311...76,064,634 		JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr20:2,766,598...2,772,571
Ensembl chr20:2,529,510...2,535,570 		JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in IEA UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr  X:143,336,460...143,345,274
Ensembl chr  X:153,222,309...153,231,135 		JBrowse link
G IREB2 iron responsive element binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:57,367,314...57,430,322
Ensembl chr15:76,331,610...76,394,476 		JBrowse link
G KGD4 alpha-ketoglutarate dehydrogenase subunit 4 involved_in ISO (MGI:6810699|PMID:25165143) UniProt PMID:25165143 MGI:6810699 NCBI chr 5:44,770,401...44,785,945 JBrowse link
G LOC100979967 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr 3:192,946,176...192,969,187
Ensembl chr 5:356,087...399,923
Ensembl chr 5:356,087...399,923 		JBrowse link
G LOC100995634 succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial-like involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr12:92,131,291...92,132,557 JBrowse link
G MDH1 malate dehydrogenase 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chr2A:63,658,933...63,677,257
Ensembl chr2A:64,785,132...64,803,631 		JBrowse link
G MDH1B malate dehydrogenase 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:93,972,114...93,999,996 JBrowse link
G MDH2 malate dehydrogenase 2 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:67,953,759...67,973,270
Ensembl chr 7:82,497,800...82,516,526 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30988181) Ensembl
MGI		 PMID:30988181 GO_REF:0000107 NCBI chr  X:36,399,868...36,424,953
Ensembl chr  X:44,224,161...44,249,067 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:9712727 GO_REF:0000118 RGD:2306877 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636 		JBrowse link
G OGDHL oxoglutarate dehydrogenase L involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:44,476,006...44,504,578 JBrowse link
G SDHAF2 succinate dehydrogenase complex assembly factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:56,729,314...56,746,075
Ensembl chr11:60,093,656...60,110,288 		JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr 1:15,962,383...15,998,056
Ensembl chr 1:17,018,542...17,054,509 		JBrowse link
G SDHC succinate dehydrogenase complex subunit C involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:136,724,663...136,773,038
Ensembl chr 1:140,635,685...140,682,736 		JBrowse link
G SUCLA2 succinate-CoA ligase ADP-forming subunit beta involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro		 PMID:17403370 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:2306915 NCBI chr13:29,095,062...29,189,618
Ensembl chr13:47,797,472...47,856,138 		JBrowse link
G SUCLG1 succinate-CoA ligase GDP/ADP-forming subunit alpha involved_in ISO
IEA		 RGD
TreeGrafter
UniProt		 PMID:17403370 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:2306915 NCBI chr2A:84,476,814...84,512,920
Ensembl chr2A:86,035,723...86,066,622 		JBrowse link
G SUCLG2 succinate-CoA ligase GDP-forming subunit beta involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro		 PMID:17403370 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:2306915 NCBI chr 3:67,277,348...67,563,181
Ensembl chr 3:68,647,738...68,931,891 		JBrowse link
G TEX12 testis expressed 12 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr11:107,048,417...107,053,655
Ensembl chr11:110,817,016...110,896,829 		JBrowse link
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  biological_process 16440
    cellular process 15499
      cellular metabolic process 8633
        generation of precursor metabolites and energy 457
          energy derivation by oxidation of organic compounds 330
            cellular respiration 235
              aerobic respiration 180
                aerobic electron transport chain + 72
                aerobic respiration, using ammonia as electron donor 0
                aerobic respiration, using arsenite as electron donor 0
                aerobic respiration, using carbon monoxide as electron donor 0
                aerobic respiration, using ferrous ions as electron donor 0
                aerobic respiration, using hydrogen as electron donor 0
                aerobic respiration, using nitrite as electron donor 0
                aerobic respiration, using sulfur or sulfate as electron donor 0
                alternative respiration 0
                oxidative phosphorylation + 135
                regulation of aerobic respiration + 37
                tricarboxylic acid cycle + 29
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