ONTOLOGY REPORT - ANNOTATIONS |
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Term: | macromolecule catabolic process |
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Accession: | GO:0009057
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browse the term
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Definition: | The chemical reactions and pathways resulting in the breakdown of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. |
Synonyms: | exact_synonym: | biopolymer catabolic process; macromolecule breakdown; macromolecule catabolism; macromolecule degradation |
| narrow_synonym: | multicellular organismal macromolecule catabolic process |
| related_synonym: | cellular macromolecule catabolic process; cellular macromolecule catabolism; cellular macromolecule degradation |
| alt_id: | GO:0043285; GO:0044266 |
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CLN6 |
CLN6 transmembrane ER protein |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3656423|PMID:15647513) |
MGI Ensembl |
PMID:15647513 |
GO_REF:0000107 MGI:3656423 |
NCBI chr 1:166,107,895...166,126,054
Ensembl chr 1:166,107,228...166,126,808
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CLN8 |
CLN8 transmembrane ER and ERGIC protein |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3656423|PMID:15647513) |
MGI Ensembl |
PMID:15647513 |
GO_REF:0000107 MGI:3656423 |
NCBI chr15:33,282,524...33,325,598
Ensembl chr15:33,288,301...33,304,631
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PPT1 |
palmitoyl-protein thioesterase 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3656423|PMID:15647513) |
MGI Ensembl |
PMID:15647513 |
GO_REF:0000107 MGI:3656423 |
NCBI chr 6:95,840,906...95,860,858
Ensembl chr 6:95,840,908...95,860,858
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CPEB3 |
cytoplasmic polyadenylation element binding protein 3 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr14:103,675,164...103,871,245
Ensembl chr14:103,675,175...103,871,227
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DHX36 |
DEAH-box helicase 36 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,794...94,350,308
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DND1 |
DND microRNA-mediated repression inhibitor 1 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 2:142,384,526...142,387,407
Ensembl chr 2:142,384,532...142,387,199
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HNRNPD |
heterogeneous nuclear ribonucleoprotein D |
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ISO |
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RGD |
PMID:20805360 |
RGD:10042974 |
NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,626
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KHSRP |
KH-type splicing regulatory protein |
involved_in |
ISO |
(PMID:28275056) (PMID:16126846) |
CACAO UniProt |
PMID:16126846 PMID:28275056 |
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NCBI chr 2:72,656,951...72,668,854
Ensembl chr 2:72,656,752...72,668,964
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KLHL17 |
kelch like family member 17 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 6:63,320,898...63,328,093
Ensembl chr 6:63,322,184...63,328,259
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MOV10 |
Mov10 RISC complex RNA helicase |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 4:107,738,089...107,763,873
Ensembl chr 4:107,738,092...107,763,602
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PLEKHN1 |
pleckstrin homology domain containing N1 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 6:63,328,054...63,336,140
Ensembl chr 6:63,328,605...63,336,138
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QKI |
QKI, KH domain containing RNA binding |
acts_upstream_of_or_within |
ISO |
(MGI:5316962|PMID:20631256) |
MGI |
PMID:20631256 |
MGI:5316962 |
NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,514...4,883,392
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RBM24 |
RNA binding motif protein 24 |
involved_in |
ISO |
(PMID:24375645) |
UniProt |
PMID:24375645 |
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NCBI chr 7:13,126,518...13,139,504
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RC3H1 |
ring finger and CCCH-type domains 1 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 9:116,204,807...116,292,455
Ensembl chr 9:116,208,799...116,292,381
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TARDBP |
TAR DNA binding protein |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,860...71,227,704
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TRIM71 |
tripartite motif containing 71 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr13:18,762,043...18,835,788
Ensembl chr13:18,761,950...18,831,564
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UPF1 |
UPF1 RNA helicase and ATPase |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,023...59,013,495
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ZC3H12A |
zinc finger CCCH-type containing 12A |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,193
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ZC3H12D |
zinc finger CCCH-type containing 12D |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr 1:16,463,532...16,498,974
Ensembl chr 1:16,465,252...16,498,971
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ZFP36 |
ZFP36 ring finger protein |
involved_in |
IEA |
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Ensembl UniProt Ensembl |
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GO_REF:0000104 GO_REF:0000107 |
NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250
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ZFP36L1 |
ZFP36 ring finger protein like 1 |
involved_in |
IEA |
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Ensembl UniProt Ensembl |
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GO_REF:0000104 GO_REF:0000107 |
NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,017...92,495,554
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ZFP36L2 |
ZFP36 ring finger protein like 2 |
involved_in |
IEA |
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Ensembl UniProt Ensembl |
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GO_REF:0000104 GO_REF:0000107 |
NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,407...97,204,698
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ANGEL2 |
angel homolog 2 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 9:130,453,912...130,476,383
Ensembl chr 9:130,453,920...130,474,921
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BOLL |
boule homolog, RNA binding protein |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr15:101,535,392...101,602,232
Ensembl chr15:101,535,705...101,602,232
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DAZL |
deleted in azoospermia like |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr13:3,762,896...3,783,848
Ensembl chr13:3,764,784...3,782,818
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ELAVL1 |
ELAV like RNA binding protein 1 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,096...71,248,906
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ELAVL4 |
ELAV like RNA binding protein 4 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 6:161,784,146...161,928,953
Ensembl chr 6:161,785,770...161,928,910
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HNRNPA0 |
heterogeneous nuclear ribonucleoprotein A0 |
involved_in |
ISO |
(MGI:5306322|PMID:12456657) |
UniProt |
PMID:12456657 |
MGI:5306322 |
NCBI chr 2:139,779,865...139,783,016
Ensembl chr 2:139,779,867...139,783,159
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HNRNPC |
heterogeneous nuclear ribonucleoprotein C |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 7:77,921,098...77,978,550
Ensembl chr 7:77,921,145...77,973,078
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MAPKAPK2 |
MAPK activated protein kinase 2 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 9:67,314,651...67,365,060
Ensembl chr 9:67,314,484...67,365,059
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MYD88 |
MYD88 innate immune signal transduction adaptor |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr13:22,976,951...22,979,568
Ensembl chr13:22,966,137...22,983,109
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PTBP1 |
polypyrimidine tract binding protein 1 |
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ISO |
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RGD |
PMID:11696543 |
RGD:10045987 |
NCBI chr 2:77,551,562...77,563,153
Ensembl chr 2:77,551,562...77,563,134
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RBM10 |
RNA binding motif protein 10 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:4367529|PMID:19508861) |
Ensembl Ensembl MGI |
PMID:19508861 |
GO_REF:0000107 MGI:4367529 |
NCBI chr X:41,773,232...41,803,656
Ensembl chr X:41,773,232...41,803,653
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RBM38 |
RNA binding motif protein 38 |
involved_in |
ISO |
(PMID:17050675) |
UniProt |
PMID:17050675 |
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NCBI chr17:57,783,156...57,802,495
Ensembl chr17:57,783,154...57,797,990
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RBM47 |
RNA binding motif protein 47 |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 8:31,508,133...31,690,757
Ensembl chr 8:31,508,148...31,690,409
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TARDBP |
TAR DNA binding protein |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,860...71,227,704
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TIRAP |
TIR domain containing adaptor protein |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 9:53,374,559...53,394,172
Ensembl chr 9:53,375,644...53,394,165
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ZFP36 |
ZFP36 ring finger protein |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250
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ACR |
acrosin |
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ISO |
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RGD |
PMID:28859281 |
RGD:13464336 |
NCBI chr 5:30,127...36,005
Ensembl chr 5:30,127...36,005
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ANAPC1 |
anaphase promoting complex subunit 1 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 3:44,483,961...44,605,035
Ensembl chr 3:44,509,680...44,605,014
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ANAPC10 |
anaphase promoting complex subunit 10 |
involved_in |
IEA |
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InterPro InterPro |
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GO_REF:0000002 |
NCBI chr 8:83,353,217...83,497,570
Ensembl chr 8:83,353,231...83,436,518
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ANAPC11 |
anaphase promoting complex subunit 11 |
involved_in |
IEA |
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InterPro |
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GO_REF:0000002 |
NCBI chr12:1,095,091...1,099,233
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ANAPC4 |
anaphase promoting complex subunit 4 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central UniProt GO_Central InterPro UniProt |
PMID:21873635 |
GO_REF:0000002 GO_REF:0000104 |
NCBI chr 8:19,301,253...19,341,463
Ensembl chr 8:19,301,248...19,341,478
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ANAPC5 |
anaphase promoting complex subunit 5 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr14:31,259,695...31,306,434
Ensembl chr14:31,259,727...31,306,441
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ANAPC7 |
anaphase promoting complex subunit 7 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr14:31,744,729...31,789,750
Ensembl chr14:31,763,243...31,789,750
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CDC16 |
cell division cycle 16 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr11:79,084,243...79,111,758
Ensembl chr11:79,084,182...79,115,268
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CDC20 |
cell division cycle 20 |
involved_in |
IBA IMP IEA |
(PMID:21873635) (PMID:18753608) |
GO_Central GO_Central AgBase Ensembl AgBase |
PMID:18753608 PMID:21873635 |
GO_REF:0000107 |
NCBI chr 6:167,886,266...167,890,587
Ensembl chr 6:167,886,270...167,890,583
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CDC20B |
cell division cycle 20B |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr16:34,294,486...34,354,588
Ensembl chr16:34,294,272...34,349,242
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CDC23 |
cell division cycle 23 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 2:140,211,334...140,245,728
Ensembl chr 2:140,211,331...140,230,789
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CDC26 |
cell division cycle 26 |
involved_in |
IEA |
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InterPro InterPro |
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GO_REF:0000002 |
NCBI chr 1:253,893,666...253,906,659
Ensembl chr 1:253,895,885...253,906,632
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CDC27 |
cell division cycle 27 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr12:16,810,868...16,882,271
Ensembl chr12:16,810,910...16,882,269
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CUL3 |
cullin 3 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:10500095) |
MGI Ensembl Ensembl |
PMID:10500095 |
GO_REF:0000107 |
NCBI chr15:126,191,605...126,287,148
Ensembl chr15:126,189,851...126,287,005
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ECRG4 |
ECRG4 augurin precursor |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
(PMID:21873635) (MGI:4454240|PMID:20404145) |
GO_Central Ensembl GO_Central MGI |
PMID:20404145 PMID:21873635 |
GO_REF:0000107 MGI:4454240 |
NCBI chr 3:48,960,413...48,971,878
Ensembl chr 3:48,960,429...48,971,511
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FBXO31 |
F-box protein 31 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 6:1,949,254...1,995,459
Ensembl chr 6:1,949,276...1,995,462
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FZR1 |
fizzy and cell division cycle 20 related 1 |
involved_in |
IMP IBA IEA |
(PMID:18753608) (PMID:21873635) |
AgBase GO_Central Ensembl AgBase GO_Central |
PMID:18753608 PMID:21873635 |
GO_REF:0000107 |
NCBI chr 2:75,122,599...75,164,134
Ensembl chr 2:75,121,835...75,146,835
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UBE2C |
ubiquitin conjugating enzyme E2 C |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr17:48,018,403...48,021,542
Ensembl chr17:48,018,400...48,021,534
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UBE2S |
ubiquitin conjugating enzyme E2 S |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 6:59,565,001...59,570,484
Ensembl chr 6:59,565,033...59,570,489
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DFFA |
DNA fragmentation factor subunit alpha |
involved_in |
IEA |
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InterPro InterPro |
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GO_REF:0000002 |
NCBI chr 6:70,725,403...70,736,264
Ensembl chr 6:70,724,590...70,736,236
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DFFB |
DNA fragmentation factor subunit beta |
involved_in acts_upstream_of_or_within |
IEA IBA ISO |
(PMID:21873635) (PMID:15572351) |
InterPro GO_Central Ensembl InterPro MGI RGD GO_Central |
PMID:11425895 PMID:15572351 PMID:21873635 |
GO_REF:0000002 GO_REF:0000107 RGD:628524 |
NCBI chr 6:65,310,868...65,323,816
Ensembl chr 6:65,310,864...65,323,806
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DICER1 |
dicer 1, ribonuclease III |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,365,802...116,411,224
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DNASE1L3 |
deoxyribonuclease 1 like 3 |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
(PMID:21873635) (MGI:2385551|PMID:12050166) |
GO_Central Ensembl MGI |
PMID:12050166 PMID:21873635 |
GO_REF:0000107 MGI:2385551 |
NCBI chr13:39,958,384...39,976,114
Ensembl chr13:39,958,387...39,975,946
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DNASE2 |
deoxyribonuclease 2, lysosomal |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 2:66,150,071...66,152,857
Ensembl chr 2:66,149,862...66,152,855
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DNASE2B |
deoxyribonuclease 2 beta |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr 6:129,329,737...129,343,003
Ensembl chr 6:129,329,867...129,340,980
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ENDOG |
endonuclease G |
involved_in acts_upstream_of_or_within |
IBA ISO IEA |
(PMID:21873635) (MGI:3029597|PMID:14663139) |
GO_Central MGI GO_Central Ensembl |
PMID:14663139 PMID:21873635 |
GO_REF:0000107 MGI:3029597 |
NCBI chr 1:269,153,955...269,157,789
Ensembl chr 1:269,154,090...269,157,788
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EXOG |
exo/endonuclease G |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr13:23,278,458...23,330,540
Ensembl chr13:23,278,932...23,307,566
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FOXL2 |
forkhead box L2 |
involved_in |
IEA ISS |
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Ensembl UniProt |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:79,708,693...79,709,825
Ensembl chr13:79,708,693...79,709,825
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VPS54 |
VPS54 subunit of GARP complex |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 3:77,856,093...77,978,194
Ensembl chr 3:77,856,138...77,975,429
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NEMF |
nuclear export mediator factor |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 1:179,622,728...179,671,225
Ensembl chr 1:179,622,755...179,670,996
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LOC100523177 |
lysozyme g-like protein 2 |
involved_in |
IEA |
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InterPro |
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GO_REF:0000002 |
NCBI chr 3:55,017,788...55,029,381
Ensembl chr 3:55,018,193...55,030,212
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ATG5 |
autophagy related 5 |
involved_in |
ISO |
PMID:23434281 |
ARUK-UCL |
PMID:23434281 |
RGD:12793031 |
NCBI chr 1:72,343,950...72,520,402
Ensembl chr 1:72,270,799...72,520,396
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ATG7 |
autophagy related 7 |
involved_in |
ISO |
PMID:23434281 |
ARUK-UCL |
PMID:23434281 |
RGD:12793031 |
NCBI chr13:67,301,756...67,699,141
Ensembl chr13:67,417,938...67,707,654
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BAG3 |
BAG cochaperone 3 |
involved_in |
ISO |
PMID:23434281 |
ARUK-UCL |
PMID:23434281 |
RGD:12793031 |
NCBI chr14:129,510,240...129,533,998
Ensembl chr14:129,466,905...129,533,987
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HSPA8 |
heat shock protein family A (Hsp70) member 8 |
involved_in acts_upstream_of_or_within |
ISO |
PMID:18644871 |
ParkinsonsUK-UCL MGI |
PMID:18644871 |
RGD:10412301 |
NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
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LAMP2 |
lysosomal associated membrane protein 2 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3813419|PMID:18579532) |
MGI Ensembl |
PMID:18579532 |
GO_REF:0000107 MGI:3813419 |
NCBI chr X:98,586,718...98,623,939
Ensembl chr X:98,556,710...98,623,940
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STUB1 |
STIP1 homology and U-box containing protein 1 |
involved_in |
ISO |
PMID:23434281 |
ARUK-UCL |
PMID:23434281 |
RGD:12793031 |
NCBI chr 3:41,092,514...41,095,181
Ensembl chr 3:41,092,449...41,095,136
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SYNPO2 |
synaptopodin 2 |
involved_in |
ISO |
PMID:23434281 |
ARUK-UCL |
PMID:23434281 |
RGD:12793031 |
NCBI chr 8:104,677,580...104,844,169
Ensembl chr 8:104,677,583...104,873,791
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CHI3L1 |
chitinase 3 like 1 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 9:113,885,541...113,895,033
Ensembl chr 9:113,885,542...113,895,131
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CHI3L2 |
chitinase 3 like 2 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr 4:109,081,543...109,099,172
Ensembl chr 4:109,081,450...109,099,098
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CHIA |
chitinase acidic |
involved_in |
ISO IBA IEA |
(PMID:21873635) |
RGD GO_Central UniProt Ensembl GO_Central |
PMID:11085997 PMID:21873635 |
GO_REF:0000107 GO_REF:0000117 RGD:5000759 |
NCBI chr 4:109,035,323...109,046,499
Ensembl chr 4:109,035,326...109,046,499
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CHIT1 |
chitinase 1 |
involved_in |
IEA IBA |
(PMID:21873635) |
UniProt GO_Central UniProt Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 9:113,927,715...113,941,445
Ensembl chr 9:113,927,720...113,941,433
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CTBS |
chitobiase |
involved_in |
IBA ISO |
(PMID:21873635) |
GO_Central GO_Central RGD |
PMID:2751306 PMID:21873635 |
RGD:2301430 |
NCBI chr 6:129,173,399...129,207,868
Ensembl chr 6:129,173,444...129,207,863
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LOC100621421 |
acidic mammalian chitinase-like |
involved_in |
IEA |
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UniProt |
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GO_REF:0000117 |
NCBI chr 4:108,981,825...109,041,096
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OVGP1 |
oviductal glycoprotein 1 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 4:108,929,034...108,941,040
Ensembl chr 4:108,929,357...108,941,038
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GUSB |
glucuronidase beta |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr 3:16,672,071...16,686,520
Ensembl chr 3:16,671,389...16,689,203
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HEXB |
hexosaminidase subunit beta |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759
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HYAL1 |
hyaluronidase 1 |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793
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HYAL4 |
hyaluronidase 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:5490850|PMID:23086929) |
Ensembl Ensembl MGI |
PMID:23086929 |
GO_REF:0000107 MGI:5490850 |
NCBI chr18:23,623,379...23,662,528
Ensembl chr18:23,625,399...23,660,792
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CSDE1 |
cold shock domain containing E1 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 4:105,804,512...105,845,735
Ensembl chr 4:105,804,587...105,845,733
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G |
DHX9 |
DExH-box helicase 9 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,141,967...124,185,349
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G |
HNRNPD |
heterogeneous nuclear ribonucleoprotein D |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,626
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G |
HNRNPU |
heterogeneous nuclear ribonucleoprotein U |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030
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IGF2BP1 |
insulin like growth factor 2 mRNA binding protein 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,197,058...25,243,272
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IGF2BP2 |
insulin like growth factor 2 mRNA binding protein 2 |
involved_in |
ISO |
(PMID:29476152) |
UniProt |
PMID:29476152 |
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NCBI chr13:123,485,619...123,650,050
Ensembl chr13:123,485,628...123,650,039
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G |
IGF2BP3 |
insulin like growth factor 2 mRNA binding protein 3 |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr 9:92,104,786...92,272,264
Ensembl chr 9:92,104,848...92,272,211
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G |
PABPC1 |
poly(A) binding protein cytoplasmic 1 |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,209,164...36,228,073
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G |
PAIP1 |
poly(A) binding protein interacting protein 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr16:28,098,580...28,134,296
Ensembl chr16:28,098,581...28,133,788
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G |
SYNCRIP |
synaptotagmin binding cytoplasmic RNA interacting protein |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,114...54,598,407
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G |
YBX1 |
Y-box binding protein 1 |
involved_in |
ISO |
(PMID:19029303) |
UniProt |
PMID:19029303 |
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NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,774...168,736,604
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DIS3 |
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr11:45,046,040...45,075,973
Ensembl chr11:45,044,508...45,075,963
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G |
EXOSC10 |
exosome component 10 |
involved_in |
ISO |
(PMID:19056938) |
UniProt |
PMID:19056938 |
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NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,999...71,282,433
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G |
EXOSC2 |
exosome component 2 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,111
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G |
EXOSC3 |
exosome component 3 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,345...238,541,333
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RNF126 |
ring finger protein 126 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:77,673,302...77,683,312
Ensembl chr 2:77,673,353...77,683,311
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G |
CNOT7 |
CCR4-NOT transcription complex subunit 7 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:3807625|PMID:18625844) |
Ensembl Ensembl MGI |
PMID:18625844 |
GO_REF:0000107 MGI:3807625 |
NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
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G |
DCP1A |
decapping mRNA 1A |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central InterPro InterPro |
PMID:21873635 |
GO_REF:0000002 |
NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,391,320...35,455,743
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G |
DCP1B |
decapping mRNA 1B |
involved_in |
IEA IBA |
(PMID:21873635) |
InterPro GO_Central InterPro GO_Central |
PMID:21873635 |
GO_REF:0000002 |
NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
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G |
DCP2 |
decapping mRNA 2 |
involved_in |
IEA IBA |
(PMID:21873635) |
InterPro GO_Central InterPro |
PMID:21873635 |
GO_REF:0000002 |
NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,613
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G |
DCPS |
decapping enzyme, scavenger |
involved_in |
IEA IBA |
(PMID:21873635) |
InterPro InterPro GO_Central GO_Central |
PMID:21873635 |
GO_REF:0000002 |
NCBI chr 9:53,400,750...53,437,161
Ensembl chr 9:53,400,755...53,437,548
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G |
LSM1 |
LSM1 homolog, mRNA degradation associated |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr15:48,348,653...48,360,004
Ensembl chr15:48,348,648...48,365,106
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G |
NOCT |
nocturnin |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:3807625|PMID:18625844) |
Ensembl MGI |
PMID:18625844 |
GO_REF:0000107 MGI:3807625 |
NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,420...87,909,241
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G |
PAN3 |
poly(A) specific ribonuclease subunit PAN3 |
acts_upstream_of_or_within |
ISO |
(MGI:3807625|PMID:18625844) |
MGI |
PMID:18625844 |
MGI:3807625 |
NCBI chr11:5,487,019...5,614,458
Ensembl chr11:5,487,138...5,614,452
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G |
PATL1 |
PAT1 homolog 1, processing body mRNA decay factor |
involved_in |
IEA IBA |
(PMID:21873635) |
InterPro InterPro GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000002 GO_REF:0000107 |
NCBI chr 2:11,826,816...11,857,699
Ensembl chr 2:11,827,773...11,857,691
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SPG11 |
SPG11 vesicle trafficking associated, spatacsin |
involved_in |
IEA |
|
InterPro InterPro |
|
GO_REF:0000002 |
NCBI chr 1:126,890,464...126,998,014
Ensembl chr 1:126,902,186...127,003,397 Ensembl chr 1:126,902,186...127,003,397
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G |
DCP1A |
decapping mRNA 1A |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
|
NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,391,320...35,455,743
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G |
DCP1B |
decapping mRNA 1B |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
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G |
EDC3 |
enhancer of mRNA decapping 3 |
involved_in |
IEA IBA |
(PMID:21873635) |
InterPro GO_Central InterPro GO_Central |
PMID:21873635 |
GO_REF:0000002 |
NCBI chr 7:58,828,693...58,895,475
Ensembl chr 7:58,828,727...58,897,919
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EDC4 |
enhancer of mRNA decapping 4 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central InterPro GO_Central |
PMID:21873635 |
GO_REF:0000002 |
NCBI chr 6:28,489,427...28,501,511
Ensembl chr 6:28,489,422...28,501,510
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G |
ARSB |
arylsulfatase B |
involved_in |
ISO |
(MGI:5608575|PMID:24240681) |
MGI |
PMID:24240681 |
MGI:5608575 |
NCBI chr 2:87,614,938...87,779,553
Ensembl chr 2:87,614,963...87,778,447
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G |
HEXA |
hexosaminidase subunit alpha |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 7:60,878,531...60,911,537
Ensembl chr 7:60,878,284...60,913,339
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G |
HEXB |
hexosaminidase subunit beta |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759
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G |
IDS |
iduronate 2-sulfatase |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr X:121,572,797...121,596,525
Ensembl chr X:121,572,807...121,596,513
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G |
IDUA |
alpha-L-iduronidase |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:4414887|PMID:19751987) (MGI:4397742|PMID:19834056) |
MGI Ensembl Ensembl |
PMID:19751987 PMID:19834056 |
GO_REF:0000107 MGI:4397742 MGI:4414887 |
NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969
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G |
MGAM |
maltase-glucoamylase |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr18:7,871,529...7,997,137
Ensembl chr18:7,871,532...7,970,169
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G |
APEX1 |
apurinic/apyrimidinic endodeoxyribonuclease 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 7:78,451,845...78,454,938
Ensembl chr 7:78,451,851...78,454,938
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G |
DFFB |
DNA fragmentation factor subunit beta |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:65,310,868...65,323,816
Ensembl chr 6:65,310,864...65,323,806
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G |
DNASE1 |
deoxyribonuclease 1 |
involved_in |
IEA IBA ISS |
(PMID:21873635) (PMID:29191910) |
InterPro GO_Central Ensembl UniProt InterPro GO_Central |
PMID:21873635 PMID:29191910 |
GO_REF:0000002 GO_REF:0000107 |
NCBI chr 3:38,590,045...38,646,852
Ensembl chr 3:38,586,602...38,646,833
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G |
DNASE1L1 |
deoxyribonuclease 1 like 1 |
involved_in |
IEA IBA |
(PMID:21873635) |
InterPro GO_Central InterPro GO_Central |
PMID:21873635 |
GO_REF:0000002 |
NCBI chr X:124,931,410...124,937,569
Ensembl chr X:124,931,410...124,939,965
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G |
DNASE1L2 |
deoxyribonuclease 1 like 2 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:5308183|PMID:21307874) |
MGI InterPro |
PMID:21307874 |
GO_REF:0000002 MGI:5308183 |
NCBI chr 3:39,757,725...39,761,497
Ensembl chr 3:39,757,296...39,761,080
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G |
DNASE1L3 |
deoxyribonuclease 1 like 3 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl InterPro InterPro |
PMID:21873635 |
GO_REF:0000002 GO_REF:0000107 |
NCBI chr13:39,958,384...39,976,114
Ensembl chr13:39,958,387...39,975,946
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G |
DNASE2 |
deoxyribonuclease 2, lysosomal |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:3521632|PMID:15568025), (MGI:3818215|PMID:18991290) |
Ensembl MGI |
PMID:15568025 PMID:18991290 |
GO_REF:0000107 MGI:3521632 MGI:3818215 |
NCBI chr 2:66,150,071...66,152,857
Ensembl chr 2:66,149,862...66,152,855
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G |
FBH1 |
F-box DNA helicase 1 |
acts_upstream_of_or_within |
ISO |
(PMID:23361013) |
MGI |
PMID:23361013 |
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NCBI chr10:65,060,714...65,108,975
Ensembl chr10:65,060,312...65,108,379
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G |
ISG20 |
interferon stimulated exonuclease gene 20 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 1:191,155,853...191,195,601
Ensembl chr 1:191,183,599...191,195,475
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G |
LOC100514009 |
histone-lysine N-methyltransferase SETMAR |
involved_in |
ISO |
(PMID:20521842), (PMID:21491884) (PMID:24573677) |
UniProt |
PMID:20521842 PMID:21491884 PMID:24573677 |
|
NCBI chr13:60,914,412...60,933,064
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G |
MUS81 |
MUS81 structure-specific endonuclease subunit |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:23361013) |
InterPro MGI |
PMID:23361013 |
GO_REF:0000002 |
NCBI chr 2:6,462,825...6,470,780
Ensembl chr 2:6,463,413...6,469,112
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G |
REXO4 |
REX4 homolog, 3'-5' exonuclease |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 1:273,011,736...273,021,956
Ensembl chr 1:273,011,734...273,021,938
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G |
TREX1 |
three prime repair exonuclease 1 |
acts_upstream_of_or_within involved_in |
ISO IBA IEA |
(MGI:4848004|PMID:20871604) (PMID:21873635) (MGI:5637600|PMID:25848017) (MGI:3834787|PMID:18724932), (MGI:4414715|PMID:19923437), (MGI:5562498|PMID:23993650) |
MGI GO_Central Ensembl |
PMID:18724932 PMID:19923437 PMID:20871604 PMID:21873635 PMID:23993650 PMID:25848017 More...
|
GO_REF:0000107 MGI:3834787 MGI:4414715 MGI:4848004 MGI:5562498 MGI:5637600 |
NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,179,291...31,180,747
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G |
DNA2 |
DNA replication helicase/nuclease 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr14:71,550,405...71,607,067
Ensembl chr14:71,552,121...71,610,740
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G |
FEN1 |
flap structure-specific endonuclease 1 |
involved_in |
IEA |
|
UniProt UniProt Ensembl |
|
GO_REF:0000104 GO_REF:0000107 |
NCBI chr 2:9,752,004...9,756,863
Ensembl chr 2:9,752,013...9,756,728
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G |
RNASEH1 |
ribonuclease H1 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
|
NCBI chr 3:131,268,908...131,277,072
Ensembl chr 3:131,268,926...131,281,930
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G |
RNASEH2A |
ribonuclease H2 subunit A |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
|
NCBI chr 2:66,192,785...66,208,417
Ensembl chr 2:66,193,197...66,207,697
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G |
CELA1 |
chymotrypsin like elastase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:5641427|PMID:24793170) |
Ensembl MGI |
PMID:24793170 |
GO_REF:0000107 MGI:5641427 |
|
|
G |
CTSL |
cathepsin L |
involved_in |
ISO |
(MGI:6259330|PMID:12417635) |
UniProt |
PMID:12417635 |
MGI:6259330 |
NCBI chr10:27,668,523...27,674,705
Ensembl chr10:27,668,264...27,674,618
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G |
CTSV |
cathepsin V |
involved_in |
ISS |
|
UniProt UniProt |
|
GO_REF:0000024 |
NCBI chr10:25,202,360...25,208,058
Ensembl chr10:25,202,389...25,209,210
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G |
MMP12 |
matrix metallopeptidase 12 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 9:33,473,625...33,483,630
Ensembl chr 9:33,473,093...33,483,679
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RAB7A |
RAB7A, member RAS oncogene family |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr13:71,777,422...71,886,758
Ensembl chr13:71,777,424...71,852,694
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SNX5 |
sorting nexin 5 |
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ISO |
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RGD |
PMID:16487940 |
RGD:13508623 |
NCBI chr17:26,352,945...26,381,677
Ensembl chr17:26,352,949...26,381,670
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AUP1 |
AUP1 lipid droplet regulating VLDL assembly factor |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 3:68,520,048...68,523,076
Ensembl chr 3:68,519,969...68,523,073
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G |
BAG6 |
BAG cochaperone 6 |
involved_in |
ISS IEA |
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UniProt UniProt Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:23,756,897...23,768,659
Ensembl chr 7:23,756,899...23,775,892
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DERL1 |
derlin 1 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 4:16,310,407...16,341,405
Ensembl chr 4:16,310,314...16,341,433
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G |
LIMK2 |
LIM domain kinase 2 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr14:47,946,370...47,979,702
Ensembl chr14:47,951,481...47,979,699
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NGLY1 |
N-glycanase 1 |
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ISO |
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RGD |
PMID:32259258 |
RGD:39457703 |
NCBI chr13:12,616,564...12,683,637
Ensembl chr13:12,616,567...12,685,823
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G |
RNF5 |
ring finger protein 5 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 7:24,215,493...24,217,983
Ensembl chr 7:24,215,704...24,217,971
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G |
SDF2L1 |
stromal cell derived factor 2 like 1 |
acts_upstream_of_or_within |
ISO |
PMID:23444373 |
MGI |
PMID:23444373 |
RGD:8554667 |
NCBI chr14:50,249,607...50,251,636
Ensembl chr14:50,246,710...50,251,642
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TOR1A |
torsin family 1 member A |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 1:269,975,919...269,985,478
Ensembl chr 1:269,974,935...269,985,523
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UFD1 |
ubiquitin recognition factor in ER associated degradation 1 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl Ensembl GO_Central GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr14:51,113,858...51,132,820
Ensembl chr14:51,113,713...51,133,072
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G |
UGGT1 |
UDP-glucose glycoprotein glucosyltransferase 1 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr15:59,141,582...59,265,053
Ensembl chr15:59,141,639...59,265,047
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G |
UGGT2 |
UDP-glucose glycoprotein glucosyltransferase 2 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr11:65,307,208...65,476,791
Ensembl chr11:65,307,168...65,476,544
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G |
VCP |
valosin containing protein |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,851,206...235,869,634
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G |
BRSK2 |
BR serine/threonine kinase 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 2:896,720...953,908
Ensembl chr 2:896,585...953,108
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G |
CCDC47 |
coiled-coil domain containing 47 |
involved_in |
IEA |
|
InterPro Ensembl |
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GO_REF:0000002 GO_REF:0000107 |
NCBI chr12:15,165,268...15,186,141
Ensembl chr12:15,165,405...15,192,356
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G |
DERL1 |
derlin 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:16,310,407...16,341,405
Ensembl chr 4:16,310,314...16,341,433
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G |
DNAJB12 |
DnaJ heat shock protein family (Hsp40) member B12 |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr14:75,169,076...75,190,109
Ensembl chr14:75,169,077...75,189,883
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G |
LIMK2 |
LIM domain kinase 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr14:47,946,370...47,979,702
Ensembl chr14:47,951,481...47,979,699
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G |
RCN3 |
reticulocalbin 3 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:54,599,347...54,611,275
Ensembl chr 6:54,599,719...54,611,272
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G |
RHBDD1 |
rhomboid domain containing 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr15:128,346,315...128,499,151
Ensembl chr15:128,346,373...128,469,213
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G |
RNF139 |
ring finger protein 139 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 4:15,157,571...15,182,520
Ensembl chr 4:15,154,331...15,197,511
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G |
RNF5 |
ring finger protein 5 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 7:24,215,493...24,217,983
Ensembl chr 7:24,215,704...24,217,971
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G |
SEL1L |
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 7:104,219,628...104,283,250
Ensembl chr 7:104,219,411...104,283,195
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G |
SEL1L2 |
SEL1L2 adaptor subunit of ERAD E3 ligase |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr17:22,515,436...22,615,444
Ensembl chr17:22,516,558...22,627,626
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G |
SYVN1 |
synoviolin 1 |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr 2:7,070,903...7,072,811
Ensembl chr 2:7,070,906...7,072,809
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G |
SYVN1 |
synoviolin 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:7,059,444...7,066,617
Ensembl chr 2:7,059,462...7,066,601
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G |
UBXN6 |
UBX domain protein 6 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:74,357,522...74,378,600
Ensembl chr 2:74,357,517...74,378,592
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G |
VCP |
valosin containing protein |
involved_in |
ISS IEA |
|
UniProt Ensembl UniProt |
|
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,851,206...235,869,634
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G |
CNOT6 |
CCR4-NOT transcription complex subunit 6 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:78,131,236...78,202,518
Ensembl chr 2:78,132,939...78,202,492
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G |
CNOT7 |
CCR4-NOT transcription complex subunit 7 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
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G |
CNOT8 |
CCR4-NOT transcription complex subunit 8 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr16:68,329,785...68,352,020
Ensembl chr16:68,329,790...68,350,260
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G |
EXOSC2 |
exosome component 2 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,111
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G |
EXOSC3 |
exosome component 3 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,345...238,541,333
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G |
EXOSC5 |
exosome component 5 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:49,373,378...49,381,875
Ensembl chr 6:49,373,379...49,382,034
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G |
EXOSC7 |
exosome component 7 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
|
NCBI chr13:28,176,806...28,206,435
Ensembl chr13:28,176,793...28,208,975
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G |
EXOSC8 |
exosome component 8 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr11:12,817,081...12,825,847
Ensembl chr11:12,817,110...12,825,843
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G |
EXOSC9 |
exosome component 9 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 8:102,265,656...102,278,179
Ensembl chr 8:102,264,470...102,278,164
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G |
BECN2 |
beclin 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:23954414) (MGI:5528919|PMID:23954414) |
Ensembl Ensembl MGI |
PMID:23954414 |
GO_REF:0000107 MGI:5528919 |
NCBI chr10:15,388,712...15,390,250
Ensembl chr10:15,388,605...15,390,226
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G |
GPRASP1 |
G protein-coupled receptor associated sorting protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:23954414) |
Ensembl Ensembl MGI |
PMID:23954414 |
GO_REF:0000107 |
NCBI chr X:83,765,210...83,810,090
Ensembl chr X:83,765,303...83,810,085
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G |
ADRA1B |
adrenoceptor alpha 1B |
acts_upstream_of |
ISO |
(MGI:3027459|PMID:14581480) |
MGI |
PMID:14581480 |
MGI:3027459 |
NCBI chr16:63,550,123...64,010,838
Ensembl chr16:63,550,130...63,603,034
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ADRB1 |
adrenoceptor beta 1 |
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ISO |
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RGD |
PMID:17911346 |
RGD:5129142 |
NCBI chr14:124,400,330...124,401,739
Ensembl chr14:124,400,330...124,401,739
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|
G |
AGL |
amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase |
involved_in |
IBA IEA ISO |
(PMID:21873635) |
GO_Central GO_Central Ensembl InterPro RGD InterPro |
PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 PMID:21873635 |
GO_REF:0000002 GO_REF:0000107 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 |
NCBI chr 4:118,186,031...118,269,106
Ensembl chr 4:118,177,377...118,269,101
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G |
G6PC1 |
glucose-6-phosphatase catalytic subunit 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:1351534|PMID:10625614) |
Ensembl Ensembl MGI |
PMID:10625614 |
GO_REF:0000107 MGI:1351534 |
NCBI chr12:19,965,885...19,975,783
Ensembl chr12:19,965,330...19,975,857
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GAA |
alpha glucosidase |
involved_in acts_upstream_of_or_within |
IBA ISO |
(PMID:21873635) (MGI:2179452|PMID:10838256) (MGI:2157196|PMID:11785984) (MGI:2136118|PMID:11328962) |
GO_Central GO_Central MGI RGD |
PMID:2193931 PMID:8710802 PMID:10838256 PMID:11328962 PMID:11785984 PMID:21873635 More...
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MGI:2136118 MGI:2157196 MGI:2179452 RGD:1599504 RGD:1599506 |
NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,314,591...2,336,988
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|
G |
HMGB1 |
high mobility group box 1 |
acts_upstream_of |
ISO |
(MGI:1339514|PMID:10391216) |
MGI |
PMID:10391216 |
MGI:1339514 |
NCBI chr11:7,195,556...7,321,071
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G |
PFKM |
phosphofructokinase, muscle |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:4356361|PMID:19696889) |
Ensembl MGI |
PMID:19696889 |
GO_REF:0000107 MGI:4356361 |
NCBI chr 5:78,475,473...78,525,052
Ensembl chr 5:78,476,123...78,526,997
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G |
PGM2 |
phosphoglucomutase 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 8:29,307,628...29,343,012
Ensembl chr 8:29,307,685...29,342,861
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G |
PHKG2 |
phosphorylase kinase catalytic subunit gamma 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:17,640,790...17,656,765
Ensembl chr 3:17,639,996...17,656,618
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G |
PYGB |
glycogen phosphorylase B |
involved_in |
IBA ISO |
(PMID:21873635) |
GO_Central GO_Central RGD |
PMID:10634496 PMID:11071367 PMID:16226229 PMID:21873635 |
RGD:1642804 RGD:1642809 RGD:2304126 |
NCBI chr17:30,940,457...30,995,688
Ensembl chr17:30,940,452...30,995,691
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G |
PYGL |
glycogen phosphorylase L |
involved_in |
IBA IEA ISO |
(PMID:21873635) |
GO_Central GO_Central Ensembl RGD |
PMID:114169 PMID:6449198 PMID:15152027 PMID:21873635 |
GO_REF:0000107 RGD:1642743 RGD:1642805 RGD:2304128 |
NCBI chr 1:180,645,849...180,704,124
Ensembl chr 1:180,620,314...180,719,979
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G |
PYGM |
glycogen phosphorylase, muscle associated |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
(PMID:21873635) (MGI:4844074|PMID:17689562) (MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562) |
GO_Central Ensembl MGI RGD |
PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 PMID:15282316 PMID:17689562 PMID:21873635 More...
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GO_REF:0000107 MGI:3052259 MGI:4844074 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 |
NCBI chr 2:7,409,330...7,421,256
Ensembl chr 2:7,409,116...7,421,254
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G |
STBD1 |
starch binding domain 1 |
involved_in |
ISO |
(PMID:20810658) |
GO_Central |
PMID:20810658 |
|
NCBI chr 8:71,982,987...71,987,880
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G |
PFKM |
phosphofructokinase, muscle |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:4356361|PMID:19696889) |
Ensembl MGI |
PMID:19696889 |
GO_REF:0000107 MGI:4356361 |
NCBI chr 5:78,475,473...78,525,052
Ensembl chr 5:78,476,123...78,526,997
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|
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G |
GAA |
alpha glucosidase |
involved_in |
ISO |
(MGI:2655991|PMID:12739885) |
MGI |
PMID:12739885 |
MGI:2655991 |
NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,314,591...2,336,988
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|
G |
GABARAPL1 |
GABA type A receptor associated protein like 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 5:61,758,127...61,767,427
Ensembl chr 5:61,758,130...61,767,601
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G |
RB1CC1 |
RB1 inducible coiled-coil 1 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
|
NCBI chr 4:77,593,204...77,649,551
Ensembl chr 4:77,594,324...77,649,548
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|
G |
STBD1 |
starch binding domain 1 |
involved_in |
ISO |
(PMID:20810658) (MGI:7261139|PMID:20810658) |
GO_Central MGI |
PMID:20810658 |
MGI:7261139 |
NCBI chr 8:71,982,987...71,987,880
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|
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G |
EDEM3 |
ER degradation enhancing alpha-mannosidase like protein 3 |
acts_upstream_of_or_within |
ISO |
(MGI:3654428|PMID:16431915) |
MGI |
PMID:16431915 |
MGI:3654428 |
NCBI chr 9:125,908,861...125,983,073
Ensembl chr 9:125,908,864...125,983,029
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G |
FBXO17 |
F-box protein 17 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
|
NCBI chr 6:47,733,064...47,759,646
Ensembl chr 6:47,732,303...47,759,606
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|
G |
FBXO2 |
F-box protein 2 |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
(PMID:21873635) (MGI:3573989|PMID:15723043) |
GO_Central GO_Central Ensembl MGI |
PMID:15723043 PMID:21873635 |
GO_REF:0000107 MGI:3573989 |
NCBI chr 6:71,740,647...71,747,265
Ensembl chr 6:71,740,677...71,748,923
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|
G |
FBXO44 |
F-box protein 44 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 6:71,747,210...71,754,519
Ensembl chr 6:71,743,261...71,774,223
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|
G |
FBXO6 |
F-box protein 6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
(PMID:21873635) (MGI:3573989|PMID:15723043) |
GO_Central MGI |
PMID:15723043 PMID:21873635 |
MGI:3573989 |
NCBI chr 6:71,755,335...71,774,264
Ensembl chr 6:71,768,498...71,774,243
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G |
MANBA |
mannosidase beta |
involved_in acts_upstream_of_or_within |
IBA ISO |
(PMID:21873635) (MGI:57603|PMID:3447593) |
GO_Central GO_Central MGI |
PMID:3447593 PMID:21873635 |
MGI:57603 |
NCBI chr 8:118,251,122...118,361,903
Ensembl chr 8:118,251,106...118,361,900
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G |
NCCRP1 |
NCCRP1, F-box associated domain containing |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
|
NCBI chr 6:47,925,879...47,929,961
Ensembl chr 6:47,915,118...47,929,937
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|
G |
NEU2 |
neuraminidase 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr15:133,392,559...133,479,406
Ensembl chr15:133,468,293...133,477,110
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|
G |
NEU4 |
neuraminidase 4 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr15:140,324,087...140,332,226
Ensembl chr15:140,325,135...140,328,276
|
|
G |
NGLY1 |
N-glycanase 1 |
involved_in |
IEA IBA |
(PMID:21873635) |
InterPro GO_Central Ensembl InterPro GO_Central |
PMID:21873635 |
GO_REF:0000002 GO_REF:0000107 |
NCBI chr13:12,616,564...12,683,637
Ensembl chr13:12,616,567...12,685,823
|
|
G |
STT3B |
STT3 oligosaccharyltransferase complex catalytic subunit B |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr13:17,532,341...17,635,039
Ensembl chr13:17,534,171...17,635,035
|
|
|
G |
HYAL2 |
hyaluronidase 2 |
involved_in |
ISS IEA |
|
UniProt Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,227...32,815,333
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IDS |
iduronate 2-sulfatase |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr X:121,572,797...121,596,525
Ensembl chr X:121,572,807...121,596,513
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G |
IDUA |
alpha-L-iduronidase |
acts_upstream_of_or_within |
ISO |
(MGI:3697540|PMID:16979922), (MGI:5448924|PMID:22580166) (MGI:4414887|PMID:19751987) (MGI:4397742|PMID:19834056) (MGI:5295514|PMID:21873421) |
RGD MGI |
PMID:6138357 PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 PMID:22580166 More...
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MGI:3697540 MGI:4397742 MGI:4414887 MGI:5295514 MGI:5448924 RGD:1599427 |
NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969
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LYVE1 |
lymphatic vessel endothelial hyaluronan receptor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:2135409|PMID:11278811) |
Ensembl Ensembl MGI |
PMID:11278811 |
GO_REF:0000107 MGI:2135409 |
NCBI chr 2:48,937,357...48,954,206
Ensembl chr 2:48,937,419...48,954,196
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G |
SGSH |
N-sulfoglucosamine sulfohydrolase |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr12:2,241,824...2,248,388
Ensembl chr12:2,241,840...2,248,376
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GPC1 |
glypican 1 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr15:139,457,866...139,483,704
Ensembl chr15:139,457,669...139,484,670
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G |
GUSB |
glucuronidase beta |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 3:16,672,071...16,686,520
Ensembl chr 3:16,671,389...16,689,203
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G |
HPSE |
heparanase |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
NCBI chr 8:135,082,199...135,120,887
Ensembl chr 8:135,097,725...135,120,887
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G |
IDS |
iduronate 2-sulfatase |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr X:121,572,797...121,596,525
Ensembl chr X:121,572,807...121,596,513
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G |
IDUA |
alpha-L-iduronidase |
involved_in |
ISO |
(MGI:3605936|PMID:15979918) (MGI:7310026|PMID:25854773) |
MGI |
PMID:15979918 PMID:25854773 |
MGI:3605936 MGI:7310026 |
NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969
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G |
LOC100154844 |
heparan-alpha-glucosaminide N-acetyltransferase |
involved_in |
ISO |
(MGI:3703408|PMID:16960811) |
MGI |
PMID:16960811 |
MGI:3703408 |
NCBI chr17:8,644,388...8,665,004
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NAGLU |
N-acetyl-alpha-glucosaminidase |
involved_in |
IEA |
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Ensembl |
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GO_REF:0000107 |
Ensembl chr12:20,271,351...20,279,777
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G |
SGSH |
N-sulfoglucosamine sulfohydrolase |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr12:2,241,824...2,248,388
Ensembl chr12:2,241,840...2,248,376
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G |
IDUA |
alpha-L-iduronidase |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:4397742|PMID:19834056) (PMID:21873421) (MGI:5295514|PMID:21873421) (MGI:4414887|PMID:19751987) |
MGI Ensembl Ensembl |
PMID:19751987 PMID:19834056 PMID:21873421 |
GO_REF:0000107 MGI:4397742 MGI:4414887 MGI:5295514 |
NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969
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G |
ATM |
ATM serine/threonine kinase |
involved_in |
ISS IEA |
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UniProt Ensembl UniProt Ensembl |
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GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,658...36,759,552
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G |
DCP2 |
decapping mRNA 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,613
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G |
ERI1 |
exoribonuclease 1 |
NOT|involved_in |
ISO |
(PMID:18172165) |
UniProt |
PMID:18172165 |
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NCBI chr15:56,091,790...56,123,520
Ensembl chr15:56,093,581...56,123,510
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G |
EXOSC10 |
exosome component 10 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,999...71,282,433
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G |
EXOSC4 |
exosome component 4 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 4:618,993...621,336
Ensembl chr 4:618,990...621,342
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G |
LSM1 |
LSM1 homolog, mRNA degradation associated |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr15:48,348,653...48,360,004
Ensembl chr15:48,348,648...48,365,106
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G |
MTPAP |
mitochondrial poly(A) polymerase |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr10:40,764,098...40,869,608
Ensembl chr10:40,764,396...40,789,061
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G |
TENT2 |
terminal nucleotidyltransferase 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 2:88,328,250...88,388,242
Ensembl chr 2:88,328,258...88,388,241
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G |
TENT4B |
terminal nucleotidyltransferase 4B |
involved_in |
ISO |
(PMID:18172165) |
UniProt |
PMID:18172165 |
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NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,605,529...34,669,278
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G |
TUT1 |
terminal uridylyl transferase 1, U6 snRNA-specific |
NOT|involved_in |
ISO |
(PMID:18172165) |
UniProt |
PMID:18172165 |
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NCBI chr 2:9,148,563...9,161,918
Ensembl chr 2:9,148,560...9,161,905
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G |
TUT4 |
terminal uridylyl transferase 4 |
NOT|involved_in |
ISO |
(PMID:18172165) |
UniProt |
PMID:18172165 |
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NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,692,797...159,793,758
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G |
TUT7 |
terminal uridylyl transferase 7 |
NOT|involved_in |
ISO |
(PMID:18172165) |
UniProt |
PMID:18172165 |
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NCBI chr10:28,995,564...29,061,179
Ensembl chr10:28,995,565...29,061,176
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G |
UPF1 |
UPF1 RNA helicase and ATPase |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,023...59,013,495
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G |
XRN1 |
5'-3' exoribonuclease 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr13:83,063,810...83,174,497
Ensembl chr13:83,065,957...83,174,477
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G |
CD44 |
CD44 molecule |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 2:25,788,699...25,884,209
Ensembl chr 2:25,788,703...25,884,153
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G |
CEMIP |
cell migration inducing hyaluronidase 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 7:49,622,534...49,792,547
Ensembl chr 7:49,622,539...49,792,543
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G |
CEMIP2 |
cell migration inducing hyaluronidase 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:224,960,875...225,042,378
Ensembl chr 1:224,960,875...225,042,308
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G |
FGF2 |
fibroblast growth factor 2 |
involved_in |
ISO |
(PMID:19577615) |
UniProt |
PMID:19577615 |
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NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916
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G |
GUSB |
glucuronidase beta |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:16,672,071...16,686,520
Ensembl chr 3:16,671,389...16,689,203
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G |
HEXA |
hexosaminidase subunit alpha |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 7:60,878,531...60,911,537
Ensembl chr 7:60,878,284...60,913,339
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G |
HEXB |
hexosaminidase subunit beta |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759
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G |
HMMR |
hyaluronan mediated motility receptor |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr16:60,290,684...60,332,411
Ensembl chr16:60,290,001...60,331,936
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G |
HYAL1 |
hyaluronidase 1 |
involved_in |
ISS IBA IEA |
(PMID:21873635) |
UniProt GO_Central Ensembl UniProt GO_Central |
PMID:21873635 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793
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G |
HYAL2 |
hyaluronidase 2 |
involved_in |
ISS IBA IEA |
(PMID:21873635) |
UniProt GO_Central Ensembl Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,227...32,815,333
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G |
HYAL3 |
hyaluronidase 3 |
involved_in |
IEA IBA ISS |
(PMID:21873635) |
Ensembl GO_Central UniProt InterPro UniProt GO_Central |
PMID:21873635 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:32,790,843...32,796,995
Ensembl chr13:32,790,850...32,796,563
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G |
HYAL4 |
hyaluronidase 4 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr18:23,623,379...23,662,528
Ensembl chr18:23,625,399...23,660,792
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G |
IFRD2 |
interferon related developmental regulator 2 |
involved_in |
IEA |
|
InterPro |
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GO_REF:0000002 |
NCBI chr13:32,756,671...32,790,763
Ensembl chr13:32,756,680...32,790,672
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G |
LYVE1 |
lymphatic vessel endothelial hyaluronan receptor 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:48,937,357...48,954,206
Ensembl chr 2:48,937,419...48,954,196
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G |
SPAM1 |
sperm adhesion molecule 1 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr18:23,589,947...23,598,739
Ensembl chr18:23,589,952...23,598,739
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G |
STAB2 |
stabilin 2 |
involved_in |
ISO |
(MGI:5315050|PMID:22371575) |
MGI |
PMID:22371575 |
MGI:5315050 |
NCBI chr 5:80,692,459...80,863,221
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G |
TGFB1 |
transforming growth factor beta 1 |
involved_in |
ISS |
|
UniProt UniProt |
|
GO_REF:0000024 |
NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046
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G |
CEACAM1 |
CEA cell adhesion molecule 1 |
involved_in |
ISO |
PMID:11850617 (MGI:3819735|PMID:18544705) |
UniProt |
PMID:11850617 PMID:18544705 |
MGI:3819735 RGD:734645 |
NCBI chr 6:49,437,308...49,460,614
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G |
CELA2A |
chymotrypsin-like elastase family, member 2A |
involved_in |
ISS |
|
UniProt UniProt |
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GO_REF:0000024 |
NCBI chr 6:74,691,653...74,707,598
Ensembl chr 6:74,691,653...74,707,598
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G |
CTSD |
cathepsin D |
involved_in |
ISO |
(MGI:5812606|PMID:27703010) |
MGI |
PMID:27703010 |
MGI:5812606 |
NCBI chr 2:1,188,548...1,197,642
Ensembl chr 2:1,188,549...1,197,643
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G |
IDE |
insulin degrading enzyme |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr14:103,992,035...104,106,571
Ensembl chr14:103,992,039...104,106,576
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G |
GNS |
glucosamine (N-acetyl)-6-sulfatase |
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ISO |
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RGD |
PMID:3161730 |
RGD:1600571 |
NCBI chr 5:29,128,754...29,190,283
Ensembl chr 5:29,128,760...29,190,230
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G |
AOAH |
acyloxyacyl hydrolase |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr18:37,416,875...37,599,934
Ensembl chr18:37,416,966...37,599,710
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G |
MATCAP2 |
microtubule associated tyrosine carboxypeptidase 2 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr18:37,714,857...37,793,059
Ensembl chr18:37,708,101...37,793,056
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G |
APOB |
apolipoprotein B |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:3588634|PMID:15863839) |
Ensembl Ensembl MGI |
PMID:15863839 |
GO_REF:0000107 MGI:3588634 |
NCBI chr 3:117,250,096...117,316,200
Ensembl chr 3:117,250,096...117,316,200
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G |
APOE |
apolipoprotein E |
involved_in acts_upstream_of_or_within |
IBA ISO |
(PMID:21873635) (MGI:3770508|PMID:17720994) |
GO_Central GO_Central MGI |
PMID:17720994 PMID:21873635 |
MGI:3770508 |
NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330
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G |
ATM |
ATM serine/threonine kinase |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:3588634|PMID:15863839) |
Ensembl Ensembl MGI |
PMID:15863839 |
GO_REF:0000107 MGI:3588634 |
NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,658...36,759,552
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G |
CTSD |
cathepsin D |
involved_in |
ISO |
(PMID:16997486) |
ARUK-UCL |
PMID:16997486 |
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NCBI chr 2:1,188,548...1,197,642
Ensembl chr 2:1,188,549...1,197,643
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G |
LDLR |
low density lipoprotein receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:1313233|PMID:9788969), (MGI:3576461|PMID:15805190) (MGI:3583861|PMID:15741654) |
Ensembl Ensembl MGI |
PMID:9788969 PMID:15741654 PMID:15805190 |
GO_REF:0000107 MGI:1313233 MGI:3576461 MGI:3583861 |
NCBI chr 2:69,828,348...69,864,823
Ensembl chr 2:69,828,332...69,864,827
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G |
LIPA |
lipase A, lysosomal acid type |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:6510385|PMID:33357458) |
MGI Ensembl |
PMID:33357458 |
GO_REF:0000107 MGI:6510385 |
NCBI chr14:101,131,372...101,254,739
Ensembl chr14:101,126,257...101,193,614
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G |
NECTIN2 |
nectin cell adhesion molecule 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:51,317,386...51,358,665
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G |
WDR82 |
WD repeat domain 82 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr13:34,387,799...34,412,190
Ensembl chr13:34,387,808...34,412,140
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G |
ZC3H4 |
zinc finger CCCH-type containing 4 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:52,894,944...52,938,715
Ensembl chr 6:52,894,951...52,938,164
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G |
PCSK9 |
proprotein convertase subtilisin/kexin type 9 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:157,388,370...157,409,620
Ensembl chr 6:157,388,372...157,409,551
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G |
BLOC1S2 |
biogenesis of lysosomal organelles complex 1 subunit 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr14:111,391,083...111,397,609
Ensembl chr14:111,388,898...111,397,594
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G |
CCDC115 |
coiled-coil domain containing 115 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr15:31,974,715...31,979,062
Ensembl chr15:31,974,724...31,979,059
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G |
CLN3 |
CLN3 lysosomal/endosomal transmembrane protein, battenin |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:18,433,564...18,450,296
Ensembl chr 3:18,433,836...18,450,290
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G |
DPP7 |
dipeptidyl peptidase 7 |
acts_upstream_of_or_within |
ISO |
(MGI:6101836|PMID:28728022) |
MGI |
PMID:28728022 |
MGI:6101836 |
|
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G |
GRN |
granulin precursor |
acts_upstream_of_or_within |
ISO |
(MGI:6101836|PMID:28728022) |
MGI |
PMID:28728022 |
MGI:6101836 |
NCBI chr12:18,893,772...18,900,444
Ensembl chr12:18,893,770...18,900,446
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G |
LAMP2 |
lysosomal associated membrane protein 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr X:98,586,718...98,623,939
Ensembl chr X:98,556,710...98,623,940
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G |
MGAT3 |
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase |
acts_upstream_of |
ISO |
(MGI:5751042|PMID:25592972), (MGI:5816436|PMID:26467158) |
MGI |
PMID:25592972 PMID:26467158 |
MGI:5751042 MGI:5816436 |
NCBI chr 5:8,777,964...8,807,144
Ensembl chr 5:8,777,965...8,807,100
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G |
PSAP |
prosaposin |
acts_upstream_of_or_within |
ISO |
(MGI:2671637|PMID:12813057) |
MGI |
PMID:12813057 |
MGI:2671637 |
NCBI chr14:74,734,185...74,820,645
Ensembl chr14:74,734,189...74,887,763
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|
G |
SLC17A9 |
solute carrier family 17 member 9 |
acts_upstream_of_or_within |
ISO |
(PMID:24962569) |
UniProt |
PMID:24962569 |
|
NCBI chr17:62,186,114...62,200,091
Ensembl chr17:62,186,112...62,200,084
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|
G |
TMEM106B |
transmembrane protein 106B |
acts_upstream_of_or_within |
ISO |
(MGI:6101836|PMID:28728022) |
MGI |
PMID:28728022 |
MGI:6101836 |
NCBI chr 9:81,837,654...81,864,215
Ensembl chr 9:81,837,667...81,864,210
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G |
TMEM199 |
transmembrane protein 199 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr12:44,636,379...44,641,536
Ensembl chr12:44,636,379...44,641,527
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G |
TPP1 |
tripeptidyl peptidase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:6101836|PMID:28728022) |
Ensembl Ensembl MGI |
PMID:28728022 |
GO_REF:0000107 MGI:6101836 |
NCBI chr 9:3,135,580...3,143,408
Ensembl chr 9:3,135,642...3,143,404
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G |
VPS13A |
vacuolar protein sorting 13 homolog A |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:230,069,339...230,331,343
Ensembl chr 1:230,069,368...230,331,200
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G |
BAG6 |
BAG cochaperone 6 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 7:23,756,897...23,768,659
Ensembl chr 7:23,756,899...23,775,892
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G |
GET4 |
guided entry of tail-anchored proteins factor 4 |
involved_in |
ISO |
(PMID:21636303) |
ParkinsonsUK-UCL |
PMID:21636303 |
|
NCBI chr 3:533,525...547,527
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G |
USP13 |
ubiquitin specific peptidase 13 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr13:117,700,080...117,826,951
Ensembl chr13:117,700,119...117,826,944
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G |
ARL8B |
ADP ribosylation factor like GTPase 8B |
involved_in |
IEA |
|
InterPro |
|
GO_REF:0000002 |
NCBI chr13:61,640,619...61,696,819
Ensembl chr13:61,640,671...61,698,374
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G |
EDEM1 |
ER degradation enhancing alpha-mannosidase like protein 1 |
involved_in |
IEA |
|
Ensembl InterPro |
|
GO_REF:0000002 GO_REF:0000107 |
NCBI chr13:61,703,601...61,732,231
Ensembl chr13:61,703,621...61,732,119
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G |
EDEM2 |
ER degradation enhancing alpha-mannosidase like protein 2 |
involved_in |
IEA |
|
Ensembl InterPro InterPro |
|
GO_REF:0000002 GO_REF:0000107 |
NCBI chr17:38,483,190...38,515,243
Ensembl chr17:38,480,044...38,515,227
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G |
EDEM3 |
ER degradation enhancing alpha-mannosidase like protein 3 |
involved_in |
IEA |
|
Ensembl Ensembl InterPro InterPro |
|
GO_REF:0000002 GO_REF:0000107 |
NCBI chr 9:125,908,861...125,983,073
Ensembl chr 9:125,908,864...125,983,029
|
|
G |
LOC110258087 |
endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase-like |
involved_in |
ISO |
(PMID:18003979), (PMID:21062743) |
ParkinsonsUK-UCL |
PMID:18003979 PMID:21062743 |
|
|
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G |
MAN1A1 |
mannosidase alpha class 1A member 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:42,729,722...42,896,290
Ensembl chr 1:42,729,722...42,896,283
|
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G |
HM13 |
histocompatibility minor 13 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr17:35,248,575...35,288,431
Ensembl chr17:35,248,570...35,288,539
|
|
G |
RHBDD1 |
rhomboid domain containing 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr15:128,346,315...128,499,151
Ensembl chr15:128,346,373...128,469,213
|
|
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G |
DIS3L2 |
DIS3 like 3'-5' exoribonuclease 2 |
involved_in |
IEA IBA |
(PMID:21873635) |
UniProt UniProt GO_Central GO_Central |
PMID:21873635 |
GO_REF:0000104 |
NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,829...132,906,232
|
|
G |
LIN28A |
lin-28 homolog A |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:83,806,178...83,818,550
Ensembl chr 6:83,806,056...83,818,633
|
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G |
LIN28B |
lin-28 homolog B |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:71,173,291...71,296,131
Ensembl chr 1:71,159,251...71,296,217
|
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G |
PARN |
poly(A)-specific ribonuclease |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,504
|
|
G |
SND1 |
staphylococcal nuclease and tudor domain containing 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr18:20,261,473...20,653,621
Ensembl chr18:20,261,476...20,653,590
|
|
G |
TENT4B |
terminal nucleotidyltransferase 4B |
involved_in |
ISO |
(PMID:25049417) |
UniProt |
PMID:25049417 |
|
NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,605,529...34,669,278
|
|
G |
TUT4 |
terminal uridylyl transferase 4 |
involved_in |
ISO |
(PMID:19703396) |
UniProt |
PMID:19703396 |
|
NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,692,797...159,793,758
|
|
G |
ZC3H12A |
zinc finger CCCH-type containing 12A |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,193
|
|
|
G |
AGO1 |
argonaute RISC component 1 |
NOT|involved_in |
ISO |
(PMID:15260970) |
BHF-UCL |
PMID:15260970 |
|
NCBI chr 6:92,038,104...92,076,477
Ensembl chr 6:91,984,303...92,215,149
|
|
G |
AGO2 |
argonaute RISC catalytic component 2 |
involved_in |
IEA |
|
UniProt UniProt Ensembl Ensembl |
|
GO_REF:0000104 GO_REF:0000107 |
NCBI chr 4:2,966,794...3,012,388
Ensembl chr 4:2,919,511...3,015,334
|
|
G |
AGO3 |
argonaute RISC catalytic component 3 |
NOT|involved_in |
ISO |
(PMID:15260970) |
BHF-UCL |
PMID:15260970 |
|
NCBI chr 6:92,081,763...92,225,811
Ensembl chr 6:92,036,834...92,215,149
|
|
G |
AGO4 |
argonaute RISC component 4 |
NOT|involved_in |
ISO |
(PMID:15260970) |
BHF-UCL |
PMID:15260970 |
|
NCBI chr 6:91,967,499...92,013,030
Ensembl chr 6:91,973,119...92,012,990
|
|
G |
MIR1 |
microRNA mir-1 |
involved_in |
ISO |
(PMID:23499676), (PMID:25802280) |
BHF-UCL |
PMID:23499676 PMID:25802280 |
|
NCBI chr17:61,894,036...61,894,143
Ensembl chr17:61,894,036...61,894,143
|
|
G |
MIR100 |
microRNA mir-100 |
involved_in |
ISO |
(PMID:22684006) |
BHF-UCL |
PMID:22684006 |
|
NCBI chr 9:49,157,909...49,157,988
Ensembl chr 9:49,157,909...49,157,988
|
|
G |
MIR125B-1 |
microRNA mir-125b-1 |
involved_in |
ISO |
(PMID:28214897) |
BHF-UCL |
PMID:28214897 |
|
NCBI chr 9:49,109,435...49,109,514
Ensembl chr 9:49,109,435...49,109,514
|
|
G |
MIR128-1 |
microRNA mir-128-1 |
involved_in |
ISO |
(PMID:33058756) |
BHF-UCL |
PMID:33058756 |
|
NCBI chr15:16,273,557...16,273,638
Ensembl chr15:16,273,551...16,273,659
|
|
G |
MIR128-2 |
microRNA mir-128-2 |
involved_in |
ISO |
(PMID:33058756) |
BHF-UCL |
PMID:33058756 |
|
NCBI chr13:21,038,445...21,038,524
Ensembl chr13:21,038,442...21,038,525
|
|
G |
MIR130A |
microRNA mir-130a |
involved_in |
ISO |
(PMID:30741461) |
BHF-UCL |
PMID:30741461 |
|
NCBI chr 2:13,296,695...13,296,773
Ensembl chr 2:13,296,695...13,296,773
|
|
G |
MIR133A-1 |
microRNA mir-133a-1 |
involved_in |
ISO |
(PMID:32205184) |
ARUK-UCL |
PMID:32205184 |
|
NCBI chr17:61,904,781...61,904,883
Ensembl chr17:61,904,781...61,904,883
|
|
G |
MIR133A-2 |
microRNA mir-133a-2 |
involved_in |
ISO |
(PMID:32205184) |
ARUK-UCL |
PMID:32205184 |
|
NCBI chr 6:106,998,899...106,998,971
Ensembl chr 6:106,998,896...106,998,982
|
|
G |
MIR137 |
microRNA mir-137 |
involved_in |
ISO |
(PMID:23275153) |
BHF-UCL |
PMID:23275153 |
|
NCBI chr 4:119,793,993...119,794,074
Ensembl chr 4:119,793,984...119,794,088
|
|
G |
MIR140 |
microRNA mir-140 |
involved_in |
ISO |
(PMID:24928442) |
BHF-UCL |
PMID:24928442 |
|
NCBI chr 6:17,077,530...17,077,599
Ensembl chr 6:17,077,507...17,077,620
|
|
G |
MIR145 |
microRNA mir-145 |
involved_in |
ISO |
(PMID:29883722) |
ARUK-UCL |
PMID:29883722 |
|
NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211
|
|
G |
MIR151 |
microRNA mir-151 |
involved_in |
ISO |
(PMID:20305651) |
BHF-UCL |
PMID:20305651 |
|
NCBI chr 4:2,849,041...2,849,120
Ensembl chr 4:2,849,038...2,849,130
|
|
G |
MIR185 |
microRNA mir-185 |
involved_in |
ISO |
(PMID:23459944), (PMID:23951060), (PMID:26316588), (PMID:29053187) |
BHF-UCL |
PMID:23459944 PMID:23951060 PMID:26316588 PMID:29053187 |
|
NCBI chr14:51,449,903...51,449,978
Ensembl chr14:51,449,903...51,449,978
|
|
G |
MIR18A |
microRNA mir-18a |
involved_in |
ISO |
(PMID:29988076) |
BHF-UCL |
PMID:29988076 |
|
NCBI chr11:60,734,791...60,734,882
Ensembl chr11:60,734,791...60,734,882
|
|
G |
MIR190B |
microRNA mir-190b |
involved_in |
ISO |
(PMID:32039833) |
BHF-UCL |
PMID:32039833 |
|
NCBI chr 4:95,540,606...95,540,688
Ensembl chr 4:95,540,606...95,540,688
|
|
G |
MIR191 |
microRNA mir-191 |
involved_in |
ISO |
(PMID:31874245) |
BHF-UCL |
PMID:31874245 |
|
NCBI chr13:31,655,484...31,655,563
Ensembl chr13:31,655,484...31,655,563
|
|
G |
MIR192 |
microRNA mir-192 |
involved_in |
ISO |
(PMID:28483554) |
BHF-UCL |
PMID:28483554 |
|
NCBI chr 2:7,285,667...7,285,746
Ensembl chr 2:7,285,667...7,285,746
|
|
G |
MIR196A-1 |
microRNA mir-196a-1 |
acts_upstream_of_or_within |
ISO |
(MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) |
MGI |
PMID:15105502 PMID:15361871 |
MGI:3042528 MGI:3510301 |
NCBI chr12:24,886,316...24,886,395
Ensembl chr12:24,886,307...24,886,408
|
|
G |
MIR196A-2 |
microRNA mir-196a-2 |
acts_upstream_of_or_within |
ISO |
(MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) |
MGI |
PMID:15105502 PMID:15361871 |
MGI:3042528 MGI:3510301 |
NCBI chr 5:19,204,442...19,204,548
Ensembl chr 5:19,204,442...19,204,548
|
|
G |
MIR206 |
microRNA mir-206 |
involved_in |
ISO |
(PMID:23499676) |
BHF-UCL |
PMID:23499676 |
|
NCBI chr 7:45,976,293...45,976,372
Ensembl chr 7:45,976,293...45,976,372
|
|
G |
MIR20A |
microRNA mir-20a |
involved_in |
ISO |
(PMID:31368162) |
BHF-UCL |
PMID:31368162 |
|
NCBI chr11:60,735,109...60,735,179
Ensembl chr11:60,735,099...60,735,196
|
|
G |
MIR212 |
microRNA mir-212 |
involved_in |
ISO |
(PMID:26693054) |
BHF-UCL |
PMID:26693054 |
|
NCBI chr12:48,163,054...48,163,135
Ensembl chr12:48,163,046...48,163,145
|
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G |
MIR214 |
microRNA mir-214 |
involved_in |
ISO |
(PMID:30703347) |
BHF-UCL |
PMID:30703347 |
|
NCBI chr 9:114,527,992...114,528,101
Ensembl chr 9:114,527,990...114,528,101
|
|
G |
MIR23A |
microRNA mir-23a |
involved_in |
ISO |
(PMID:26400397) |
BHF-UCL |
PMID:26400397 |
|
NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186
|
|
G |
MIR27A |
microRNA mir-27a |
involved_in |
ISO |
(PMID:25915942), (PMID:26400397) |
BHF-UCL |
PMID:25915942 PMID:26400397 |
|
NCBI chr 2:65,308,294...65,308,375
Ensembl chr 2:65,308,294...65,308,375
|
|
G |
MIR326 |
microRNA mir-326 |
involved_in |
ISO |
(PMID:24279830) |
BHF-UCL |
PMID:24279830 |
|
NCBI chr 9:9,581,944...9,582,034
Ensembl chr 9:9,581,944...9,582,034
|
|
G |
MIR342 |
microRNA mir-342 |
involved_in |
ISO |
(PMID:23951060) |
BHF-UCL |
PMID:23951060 |
|
NCBI chr 7:121,021,761...121,021,840
Ensembl chr 7:121,021,761...121,021,840
|
|
G |
MIR423 |
microRNA mir-423 |
involved_in |
ISO |
(PMID:32264887) |
BHF-UCL |
PMID:32264887 |
|
NCBI chr12:46,211,525...46,211,604
Ensembl chr12:46,211,525...46,211,611
|
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G |
MIR885 |
microRNA mir-885 |
involved_in |
ISO |
(PMID:24882581) |
BHF-UCL |
PMID:24882581 |
|
NCBI chr13:66,597,531...66,597,610
Ensembl chr13:66,597,531...66,597,610
|
|
G |
MIR9-1 |
microRNA mir-9-1 |
involved_in |
ISO |
(PMID:29584810) |
BHF-UCL |
PMID:29584810 |
|
NCBI chr 4:93,660,422...93,660,510
|
|
G |
MIR9-2 |
microRNA mir-9-2 |
involved_in |
ISO |
(PMID:29584810) |
BHF-UCL |
PMID:29584810 |
|
NCBI chr 2:96,076,352...96,076,438
|
|
G |
MIR9-3 |
microRNA mir-9-3 |
involved_in |
ISO |
(PMID:29584810) |
BHF-UCL |
PMID:29584810 |
|
NCBI chr 7:54,948,452...54,948,532
Ensembl chr 7:54,948,447...54,948,536
|
|
G |
MIR96 |
microRNA mir-96 |
involved_in |
ISO |
(PMID:23459944) |
BHF-UCL |
PMID:23459944 |
|
NCBI chr18:18,982,506...18,982,590
Ensembl chr18:18,982,506...18,982,590
|
|
G |
MIR98 |
microRNA mir-98 |
involved_in |
ISO |
(PMID:27860183), (PMID:30195495) |
BHF-UCL |
PMID:27860183 PMID:30195495 |
|
NCBI chr X:46,302,381...46,302,460
Ensembl chr X:46,302,381...46,302,460
|
|
G |
MIRLET7A-1 |
microRNA let-7a-1 |
involved_in |
ISO |
(PMID:17671087) |
BHF-UCL |
PMID:17671087 |
|
NCBI chr 9:49,152,586...49,152,665
Ensembl chr 9:49,152,586...49,152,665
|
|
G |
MIRLET7A-2 |
microRNA let-7a-2 |
involved_in |
ISO |
(PMID:17671087) |
BHF-UCL |
PMID:17671087 |
|
NCBI chr 3:43,465,667...43,465,758
Ensembl chr 3:43,465,667...43,465,758
|
|
G |
MOV10 |
Mov10 RISC complex RNA helicase |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:107,738,089...107,763,873
Ensembl chr 4:107,738,092...107,763,602
|
|
|
G |
ENDOG |
endonuclease G |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:269,153,955...269,157,789
Ensembl chr 1:269,154,090...269,157,788
|
|
|
G |
PDE12 |
phosphodiesterase 12 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr13:39,395,517...39,402,653
Ensembl chr13:39,395,541...39,402,650
|
|
G |
PNPT1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
|
|
G |
SUPV3L1 |
Suv3 like RNA helicase |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,273,688
|
|
|
G |
SUPV3L1 |
Suv3 like RNA helicase |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,273,688
|
|
|
G |
SUPV3L1 |
Suv3 like RNA helicase |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,273,688
|
|
|
G |
AFG1L |
AFG1 like ATPase |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:74,367,421...74,590,766
Ensembl chr 1:74,367,617...74,591,853
|
|
G |
BNIP3 |
BCL2 interacting protein 3 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr14:140,362,123...140,371,951
Ensembl chr14:140,362,127...140,371,907
|
|
G |
BNIP3L |
BCL2 interacting protein 3 like |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr14:10,318,688...10,345,689
Ensembl chr14:10,318,732...10,345,679
|
|
G |
PISD |
phosphatidylserine decarboxylase |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr14:48,303,459...48,341,820
Ensembl chr14:48,303,458...48,312,393
|
|
G |
SPATA18 |
spermatogenesis associated 18 |
involved_in |
IEA ISS IBA |
(PMID:21873635) |
InterPro UniProt Ensembl InterPro GO_Central Ensembl UniProt GO_Central |
PMID:21873635 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 |
NCBI chr 8:39,163,001...39,206,217
Ensembl chr 8:39,163,088...39,203,956
|
|
G |
YME1L1 |
YME1 like 1 ATPase |
involved_in |
ISO |
(PMID:27495975), (PMID:27786171) |
UniProt |
PMID:27495975 PMID:27786171 |
|
NCBI chr10:48,807,654...48,855,228
|
|
|
G |
LRPPRC |
leucine rich pentatricopeptide repeat containing |
acts_upstream_of |
ISO |
(MGI:5438202|PMID:22045337) (MGI:5301479|PMID:21880015) |
MGI |
PMID:21880015 PMID:22045337 |
MGI:5301479 MGI:5438202 |
NCBI chr 3:96,474,510...96,590,706
Ensembl chr 3:96,474,549...96,595,143
|
|
G |
PNPT1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
|
|
|
G |
SUPV3L1 |
Suv3 like RNA helicase |
involved_in |
ISO |
(PMID:19864255) |
UniProt |
PMID:19864255 |
|
NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,273,688
|
|
|
G |
CHFR |
checkpoint with forkhead and ring finger domains |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr14:22,654,462...22,683,970
Ensembl chr14:22,654,481...22,683,966
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ISG15 |
ISG15 ubiquitin like modifier |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
(PMID:21873635) (MGI:3511369|PMID:15485925) |
GO_Central GO_Central Ensembl MGI |
PMID:15485925 PMID:21873635 |
GO_REF:0000107 MGI:3511369 |
NCBI chr 6:63,363,201...63,364,211
Ensembl chr 6:63,363,173...63,364,208
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LOC100627076 |
ubiquitin-like protein FUBI pseudogene |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr11:21,922,050...21,923,151
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NEDD8 |
NEDD8 ubiquitin like modifier |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 7:75,069,947...75,085,905
Ensembl chr 7:75,070,161...75,085,899
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RPS27A |
ribosomal protein S27a |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 3:85,989,609...85,992,257
Ensembl chr 3:85,986,501...85,992,503
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UBA52 |
ubiquitin A-52 residue ribosomal protein fusion product 1 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr 2:59,238,802...59,241,512
Ensembl chr 2:59,238,906...59,240,274
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UBA7 |
ubiquitin like modifier activating enzyme 7 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:3511369|PMID:15485925) |
Ensembl MGI |
PMID:15485925 |
GO_REF:0000107 MGI:3511369 |
NCBI chr13:32,330,536...32,341,300
Ensembl chr13:32,332,367...32,341,217
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UBB |
ubiquitin B |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr12:59,171,258...59,172,841
Ensembl chr12:59,171,289...59,172,841
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UBC |
ubiquitin C |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr14:28,253,857...28,260,771
Ensembl chr14:28,257,027...28,263,044
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UBE2L6 |
ubiquitin conjugating enzyme E2 L6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:3511369|PMID:15485925) |
Ensembl Ensembl MGI |
PMID:15485925 |
GO_REF:0000107 MGI:3511369 |
NCBI chr 2:13,354,088...13,368,446
Ensembl chr 2:13,354,014...13,370,792
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AGO3 |
argonaute RISC catalytic component 3 |
involved_in |
ISO |
(PMID:18771919) |
UniProt |
PMID:18771919 |
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NCBI chr 6:92,081,763...92,225,811
Ensembl chr 6:92,036,834...92,215,149
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AGO4 |
argonaute RISC component 4 |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr 6:91,967,499...92,013,030
Ensembl chr 6:91,973,119...92,012,990
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CNOT10 |
CCR4-NOT transcription complex subunit 10 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr13:18,649,725...18,736,075
Ensembl chr13:18,649,746...18,736,068
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CNOT11 |
CCR4-NOT transcription complex subunit 11 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr 3:53,064,648...53,081,315
Ensembl chr 3:53,062,965...53,081,441
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G |
CNOT7 |
CCR4-NOT transcription complex subunit 7 |
involved_in |
IEA |
|
UniProt UniProt |
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GO_REF:0000117 |
NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
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G |
CNOT8 |
CCR4-NOT transcription complex subunit 8 |
involved_in |
IEA |
|
UniProt UniProt |
|
GO_REF:0000117 |
NCBI chr16:68,329,785...68,352,020
Ensembl chr16:68,329,790...68,350,260
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CNOT9 |
CCR4-NOT transcription complex subunit 9 |
involved_in |
IEA |
|
InterPro InterPro |
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GO_REF:0000002 |
NCBI chr15:120,590,354...120,622,203
Ensembl chr15:120,590,641...120,623,898
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DCP2 |
decapping mRNA 2 |
involved_in |
IEA |
|
Ensembl UniProt |
|
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,613
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DIS3L2 |
DIS3 like 3'-5' exoribonuclease 2 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
|
NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,829...132,906,232
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G |
DXO |
decapping exoribonuclease |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 7:24,057,670...24,060,108
Ensembl chr 7:24,056,525...24,059,997
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KHSRP |
KH-type splicing regulatory protein |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:5439239|PMID:22844247) |
Ensembl Ensembl MGI |
PMID:22844247 |
GO_REF:0000107 MGI:5439239 |
NCBI chr 2:72,656,951...72,668,854
Ensembl chr 2:72,656,752...72,668,964
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G |
LSM2 |
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:12515382) |
MGI Ensembl Ensembl |
PMID:12515382 |
GO_REF:0000107 |
NCBI chr 7:23,900,385...23,908,523
Ensembl chr 7:23,900,395...23,908,490
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G |
LSM5 |
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:12515382) |
MGI Ensembl |
PMID:12515382 |
GO_REF:0000107 |
NCBI chr18:40,752,390...40,755,909
Ensembl chr18:40,752,461...40,755,906
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G |
LSM6 |
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated |
acts_upstream_of_or_within |
ISO |
(PMID:12515382) |
MGI |
PMID:12515382 |
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NCBI chr 8:82,409,170...82,428,501
Ensembl chr 8:82,409,174...82,428,426
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G |
METTL14 |
methyltransferase 14, N6-adenosine-methyltransferase subunit |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 8:105,019,539...105,053,603
Ensembl chr 8:105,015,420...105,053,563
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G |
METTL16 |
methyltransferase 16, N6-methyladenosine |
involved_in |
ISO |
(MGI:6114846|PMID:29262316) |
UniProt |
PMID:29262316 |
MGI:6114846 |
NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,536
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G |
METTL3 |
methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit |
involved_in |
ISO |
(MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) |
UniProt |
PMID:28637692 PMID:28792938 PMID:28965759 |
MGI:5927282 MGI:6094929 MGI:6095345 |
NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,934
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G |
MIR144 |
microRNA mir-144 |
involved_in |
ISO |
(MGI:6442632|PMID:30971389) |
MGI |
PMID:30971389 |
MGI:6442632 |
NCBI chr12:45,088,958...45,089,033
Ensembl chr12:45,088,959...45,089,035
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G |
MIR451 |
microRNA mir-451 |
involved_in |
ISO |
(MGI:6442632|PMID:30971389) |
MGI |
PMID:30971389 |
MGI:6442632 |
NCBI chr12:45,088,808...45,088,872
Ensembl chr12:45,088,808...45,088,872
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|
G |
MIRLET7C |
microRNA let-7c |
acts_upstream_of_or_within |
ISO |
(MGI:5439239|PMID:22844247) |
MGI |
PMID:22844247 |
MGI:5439239 |
NCBI chr13:181,303,209...181,303,302
Ensembl chr13:181,303,209...181,303,302
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G |
NANOS2 |
nanos C2HC-type zinc finger 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 6:52,218,889...52,219,834
Ensembl chr 6:52,219,418...52,219,834
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G |
NUDT12 |
nudix hydrolase 12 |
involved_in |
ISO |
(MGI:6368680|PMID:31101919) |
UniProt |
PMID:31101919 |
MGI:6368680 |
NCBI chr 2:109,044,946...109,059,721
Ensembl chr 2:109,045,592...109,059,616
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G |
NUDT16 |
nudix hydrolase 16 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr13:1,125,180...1,128,036
Ensembl chr13:1,125,183...1,128,041
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G |
NUDT16L1 |
nudix hydrolase 16 like 1 |
NOT|involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr 3:37,684,206...37,694,653
Ensembl chr 3:37,684,207...37,693,652
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G |
PARN |
poly(A)-specific ribonuclease |
involved_in |
IEA |
|
InterPro InterPro |
|
GO_REF:0000002 |
NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,504
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G |
PNPT1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
IEA |
|
InterPro InterPro Ensembl |
|
GO_REF:0000002 GO_REF:0000107 |
NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
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G |
RIDA |
reactive intermediate imine deaminase A homolog |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:38,656,270...38,665,863
Ensembl chr 4:38,656,319...38,670,987
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G |
SLFN14 |
schlafen family member 14 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr12:39,947,791...39,962,823
Ensembl chr12:39,950,505...39,961,513
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G |
SND1 |
staphylococcal nuclease and tudor domain containing 1 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr18:20,261,473...20,653,621
Ensembl chr18:20,261,476...20,653,590
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G |
TUT4 |
terminal uridylyl transferase 4 |
involved_in |
IEA |
|
UniProt |
|
GO_REF:0000117 |
NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,692,797...159,793,758
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G |
TUT7 |
terminal uridylyl transferase 7 |
involved_in |
IEA |
|
UniProt |
|
GO_REF:0000117 |
NCBI chr10:28,995,564...29,061,179
Ensembl chr10:28,995,565...29,061,176
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G |
YTHDF2 |
YTH N6-methyladenosine RNA binding protein F2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:85,717,147...85,756,750
Ensembl chr 6:85,716,983...85,726,473
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G |
ZC3H12D |
zinc finger CCCH-type containing 12D |
involved_in acts_upstream_of_or_within |
IBA ISO |
(PMID:21873635) (MGI:5567042|PMID:24415781) |
GO_Central MGI |
PMID:21873635 PMID:24415781 |
MGI:5567042 |
NCBI chr 1:16,463,532...16,498,974
Ensembl chr 1:16,465,252...16,498,971
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ZFP36 |
ZFP36 ring finger protein |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:10751406), (PMID:11782475) |
MGI Ensembl |
PMID:10751406 PMID:11782475 |
GO_REF:0000107 |
NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250
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G |
ZFP36L1 |
ZFP36 ring finger protein like 1 |
acts_upstream_of_or_within |
ISO |
PMID:10751406 |
MGI |
PMID:10751406 |
RGD:1580602 |
NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,017...92,495,554
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G |
ZFP36L2 |
ZFP36 ring finger protein like 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,407...97,204,698
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G |
ZHX2 |
zinc fingers and homeoboxes 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:49288|PMID:1370712) |
Ensembl Ensembl MGI |
PMID:1370712 |
GO_REF:0000107 MGI:49288 |
NCBI chr 4:16,374,900...16,553,859
Ensembl chr 4:16,374,902...16,553,002
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G |
CELF1 |
CUGBP Elav-like family member 1 |
involved_in |
ISO |
PMID:30508596 |
ARUK-UCL |
PMID:30508596 |
RGD:38501076 |
NCBI chr 2:15,066,518...15,161,478
Ensembl chr 2:15,066,510...15,154,386
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G |
CNOT6L |
CCR4-NOT transcription complex subunit 6 like |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3828348|PMID:17452450) |
MGI Ensembl |
PMID:17452450 |
GO_REF:0000107 MGI:3828348 |
NCBI chr 8:73,191,721...73,335,779
Ensembl chr 8:73,185,999...73,335,741
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G |
FTO |
FTO alpha-ketoglutarate dependent dioxygenase |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,718
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G |
FXR1 |
FMR1 autosomal homolog 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr13:118,839,314...118,899,804
Ensembl chr13:118,839,338...118,900,136
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G |
FXR2 |
FMR1 autosomal homolog 2 |
involved_in |
ISO |
(MGI:5141571|PMID:21658585) |
UniProt |
PMID:21658585 |
MGI:5141571 |
NCBI chr12:52,885,932...52,903,257
Ensembl chr12:52,882,870...52,903,450
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G |
GIGYF2 |
GRB10 interacting GYF protein 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr15:133,180,638...133,313,307
Ensembl chr15:133,260,113...133,311,887
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G |
HNRNPR |
heterogeneous nuclear ribonucleoprotein R |
|
ISO |
|
RGD |
PMID:15798208 |
RGD:9854643 |
NCBI chr 6:81,203,067...81,239,823
Ensembl chr 6:81,196,062...81,239,406
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G |
METTL14 |
methyltransferase 14, N6-adenosine-methyltransferase subunit |
involved_in |
IEA |
|
Ensembl UniProt Ensembl |
|
GO_REF:0000104 GO_REF:0000107 |
NCBI chr 8:105,019,539...105,053,603
Ensembl chr 8:105,015,420...105,053,563
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G |
METTL16 |
methyltransferase 16, N6-methyladenosine |
involved_in |
ISO |
(MGI:6114846|PMID:29262316) |
UniProt |
PMID:29262316 |
MGI:6114846 |
NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,536
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|
G |
METTL3 |
methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit |
involved_in |
ISO |
(MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) |
UniProt |
PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 PMID:28965759 More...
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MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 |
NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,934
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|
G |
MIR144 |
microRNA mir-144 |
involved_in |
ISO |
(MGI:6442632|PMID:30971389) |
MGI |
PMID:30971389 |
MGI:6442632 |
NCBI chr12:45,088,958...45,089,033
Ensembl chr12:45,088,959...45,089,035
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|
G |
MIR451 |
microRNA mir-451 |
involved_in |
ISO |
(MGI:6442632|PMID:30971389) |
MGI |
PMID:30971389 |
MGI:6442632 |
NCBI chr12:45,088,808...45,088,872
Ensembl chr12:45,088,808...45,088,872
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G |
PUM1 |
pumilio RNA binding family member 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:87,546,388...87,687,483
Ensembl chr 6:87,547,320...87,687,442
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G |
RBM24 |
RNA binding motif protein 24 |
involved_in |
ISO |
(PMID:29104163) |
UniProt |
PMID:29104163 |
|
NCBI chr 7:13,126,518...13,139,504
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G |
RIDA |
reactive intermediate imine deaminase A homolog |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:38,656,270...38,665,863
Ensembl chr 4:38,656,319...38,670,987
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|
G |
ROCK1 |
Rho associated coiled-coil containing protein kinase 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,989...106,314,944
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G |
ROCK2 |
Rho associated coiled-coil containing protein kinase 2 |
involved_in |
ISO |
(MGI:6271078|PMID:29353861) |
ARUK-UCL |
PMID:29353861 |
MGI:6271078 |
NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,352,920...125,493,362
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G |
TUT4 |
terminal uridylyl transferase 4 |
involved_in |
IEA |
|
UniProt |
|
GO_REF:0000117 |
NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,692,797...159,793,758
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G |
TUT7 |
terminal uridylyl transferase 7 |
involved_in |
IEA |
|
UniProt |
|
GO_REF:0000117 |
NCBI chr10:28,995,564...29,061,179
Ensembl chr10:28,995,565...29,061,176
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|
G |
YTHDF1 |
YTH N6-methyladenosine RNA binding protein F1 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr17:62,329,302...62,341,312
Ensembl chr17:62,329,302...62,341,413
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G |
YTHDF2 |
YTH N6-methyladenosine RNA binding protein F2 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 6:85,717,147...85,756,750
Ensembl chr 6:85,716,983...85,726,473
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|
G |
YTHDF3 |
YTH N6-methyladenosine RNA binding protein F3 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 4:70,887,101...70,928,839
Ensembl chr 4:70,887,105...70,928,807
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G |
APOBEC1 |
apolipoprotein B mRNA editing enzyme catalytic subunit 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:3057047|PMID:15480992) |
Ensembl Ensembl MGI |
PMID:15480992 |
GO_REF:0000107 MGI:3057047 |
NCBI chr 5:62,811,819...62,820,532
Ensembl chr 5:62,810,879...62,820,173
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G |
AXIN2 |
axin 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr12:12,311,293...12,343,207
Ensembl chr12:12,311,298...12,343,200
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|
G |
CIRBP |
cold inducible RNA binding protein |
involved_in |
ISO |
(PMID:11574538) |
UniProt |
PMID:11574538 |
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NCBI chr 2:77,185,295...77,194,373
Ensembl chr 2:77,189,846...77,195,569
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DICER1 |
dicer 1, ribonuclease III |
acts_upstream_of_or_within |
ISO |
(MGI:5439239|PMID:22844247) |
MGI |
PMID:22844247 |
MGI:5439239 |
NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,365,802...116,411,224
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DND1 |
DND microRNA-mediated repression inhibitor 1 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 2:142,384,526...142,387,407
Ensembl chr 2:142,384,532...142,387,199
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G |
E2F1 |
E2F transcription factor 1 |
involved_in |
IEA |
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Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr17:37,178,587...37,190,118
Ensembl chr17:37,178,599...37,189,883
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EIF4ENIF1 |
eukaryotic translation initiation factor 4E nuclear import factor 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr14:48,156,835...48,204,701
Ensembl chr14:48,156,727...48,204,926
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ELAVL1 |
ELAV like RNA binding protein 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615) (PMID:21613615) |
MGI Ensembl |
PMID:14976220 PMID:21613615 |
GO_REF:0000107 MGI:3037407 MGI:5287957 |
NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,096...71,248,906
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FUS |
FUS RNA binding protein |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:27378374) |
MGI Ensembl Ensembl |
PMID:27378374 |
GO_REF:0000107 |
NCBI chr 3:17,314,936...17,326,663
Ensembl chr 3:17,314,332...17,326,637
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GDNF |
glial cell derived neurotrophic factor |
involved_in |
IEA |
|
Ensembl |
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GO_REF:0000107 |
NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,604...22,966,536
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HNRNPD |
heterogeneous nuclear ribonucleoprotein D |
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ISO |
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RGD |
PMID:15192077 |
RGD:1357938 |
NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,626
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HNRNPU |
heterogeneous nuclear ribonucleoprotein U |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030
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IKBKE |
inhibitor of nuclear factor kappa B kinase subunit epsilon |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 9:67,123,055...67,147,991
Ensembl chr 9:67,123,265...67,147,989
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LARP1 |
La ribonucleoprotein 1, translational regulator |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr16:68,390,879...68,451,605
Ensembl chr16:68,390,880...68,484,918
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MAPKAPK2 |
MAPK activated protein kinase 2 |
acts_upstream_of_or_within |
ISO |
(MGI:2158083|PMID:11741878) |
MGI |
PMID:11741878 |
MGI:2158083 |
NCBI chr 9:67,314,651...67,365,060
Ensembl chr 9:67,314,484...67,365,059
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G |
MEIOC |
meiosis specific with coiled-coil domain |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr12:18,652,582...18,663,227
Ensembl chr12:18,651,511...18,671,987
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MTOR |
mechanistic target of rapamycin kinase |
|
ISO |
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RGD |
PMID:21073857 |
RGD:10040969 |
NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
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NOCT |
nocturnin |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,420...87,909,241
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NRDE2 |
NRDE-2, necessary for RNA interference, domain containing |
involved_in |
ISO |
(PMID:30842217) |
UniProt |
PMID:30842217 |
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NCBI chr 7:112,039,949...112,090,632
Ensembl chr 7:112,038,234...112,090,510
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G |
QKI |
QKI, KH domain containing RNA binding |
|
ISO |
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RGD |
PMID:16855020 |
RGD:10045995 |
NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,514...4,883,392
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RBM10 |
RNA binding motif protein 10 |
|
ISO |
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RGD |
PMID:19508861 |
RGD:151667451 |
NCBI chr X:41,773,232...41,803,656
Ensembl chr X:41,773,232...41,803,653
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G |
RBM24 |
RNA binding motif protein 24 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr 7:13,126,518...13,139,504
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RBM38 |
RNA binding motif protein 38 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central |
PMID:21873635 |
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NCBI chr17:57,783,156...57,802,495
Ensembl chr17:57,783,154...57,797,990
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G |
RBM46 |
RNA binding motif protein 46 |
acts_upstream_of_or_within |
ISO |
(MGI:5644240|PMID:25397698) |
MGI |
PMID:25397698 |
MGI:5644240 |
NCBI chr 8:74,337,324...74,383,044
Ensembl chr 8:74,337,319...74,382,515
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G |
SLC11A1 |
solute carrier family 11 member 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:85148|PMID:9009318) |
Ensembl Ensembl MGI |
PMID:9009318 |
GO_REF:0000107 MGI:85148 |
NCBI chr15:120,434,100...120,446,396
Ensembl chr15:120,433,952...120,446,396
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G |
SRSF1 |
serine and arginine rich splicing factor 1 |
involved_in |
ISO |
(MGI:5291882|PMID:21822258) |
MGI |
PMID:21822258 |
MGI:5291882 |
NCBI chr12:34,278,363...34,282,164
Ensembl chr12:34,272,956...34,282,162
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G |
TAF15 |
TATA-box binding protein associated factor 15 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:27378374) |
MGI Ensembl Ensembl |
PMID:27378374 |
GO_REF:0000107 |
NCBI chr12:39,687,171...39,716,761
Ensembl chr12:39,686,884...39,724,769
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G |
TENT5A |
terminal nucleotidyltransferase 5A |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 1:84,545,033...84,552,138
Ensembl chr 1:84,545,202...84,552,134
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G |
TENT5B |
terminal nucleotidyltransferase 5B |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr 6:84,303,495...84,310,957
Ensembl chr 6:84,304,395...84,310,733
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G |
TENT5C |
terminal nucleotidyltransferase 5C |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 4:103,131,819...103,154,074
Ensembl chr 4:103,131,830...103,154,070
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G |
TENT5D |
terminal nucleotidyltransferase 5D |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
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NCBI chr X:64,120,229...64,122,912
Ensembl chr X:64,120,248...64,121,420
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G |
THRAP3 |
thyroid hormone receptor associated protein 3 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:92,350,021...92,412,335
Ensembl chr 6:92,355,667...92,412,330
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G |
TRAF2 |
TNF receptor associated factor 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
|
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G |
TRAF3IP2 |
TRAF3 interacting protein 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:77,483,997...77,541,557
Ensembl chr 1:77,487,577...77,541,198
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G |
TRAF5 |
TNF receptor associated factor 5 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 9:131,772,810...131,822,555
Ensembl chr 9:131,775,470...131,822,529
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VEGFA |
vascular endothelial growth factor A |
|
ISO |
|
RGD |
PMID:12881220 |
RGD:1580563 |
NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366
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G |
VIP |
vasoactive intestinal peptide |
involved_in |
ISS |
|
AgBase AgBase |
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GO_REF:0000024 |
NCBI chr 1:13,611,786...13,620,250
Ensembl chr 1:13,611,311...13,620,269
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G |
YBX1 |
Y-box binding protein 1 |
involved_in |
ISO |
(PMID:31358969) |
UniProt |
PMID:31358969 |
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NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,774...168,736,604
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|
G |
YBX2 |
Y-box binding protein 2 |
acts_upstream_of_or_within |
ISO |
(MGI:3696301|PMID:17035640) |
MGI |
PMID:17035640 |
MGI:3696301 |
NCBI chr12:52,635,383...52,642,443
Ensembl chr12:52,635,385...52,641,651
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G |
ZAR1 |
zygote arrest 1 |
involved_in |
ISO |
(MGI:7367293|PMID:36264786) |
UniProt |
PMID:36264786 |
MGI:7367293 |
NCBI chr 8:38,386,520...38,391,618
Ensembl chr 8:38,386,643...38,391,611
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G |
TENT4B |
terminal nucleotidyltransferase 4B |
involved_in |
ISO |
(PMID:26950371) |
BHF-UCL |
PMID:26950371 |
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NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,605,529...34,669,278
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G |
METTL16 |
methyltransferase 16, N6-methyladenosine |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,536
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G |
DFFA |
DNA fragmentation factor subunit alpha |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:15572351) (MGI:2182584|PMID:10601318), (MGI:3029597|PMID:14663139) |
Ensembl Ensembl MGI |
PMID:10601318 PMID:14663139 PMID:15572351 |
GO_REF:0000107 MGI:2182584 MGI:3029597 |
NCBI chr 6:70,725,403...70,736,264
Ensembl chr 6:70,724,590...70,736,236
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G |
DFFB |
DNA fragmentation factor subunit beta |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:65,310,868...65,323,816
Ensembl chr 6:65,310,864...65,323,806
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G |
LOC100513346 |
mitochondrial import inner membrane translocase subunit TIM16 |
|
ISO |
|
RGD |
PMID:24069394 |
RGD:13462066 |
NCBI chr 3:37,928,098...38,005,619
Ensembl chr 3:37,928,096...37,985,151
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G |
NMNAT1 |
nicotinamide nucleotide adenylyltransferase 1 |
|
ISO |
|
RGD |
PMID:27184051 |
RGD:13781945 |
NCBI chr 6:70,271,296...70,307,403
Ensembl chr 6:70,272,014...70,310,707
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G |
CTSA |
cathepsin A |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr17:48,082,480...48,089,971
Ensembl chr17:48,082,448...48,089,971
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G |
SNCA |
synuclein alpha |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 8:129,247,724...129,388,307
Ensembl chr 8:129,248,819...129,271,128
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|
|
G |
EIF4ENIF1 |
eukaryotic translation initiation factor 4E nuclear import factor 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr14:48,156,835...48,204,701
Ensembl chr14:48,156,727...48,204,926
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G |
RGN |
regucalcin |
|
ISO |
|
RGD |
PMID:2001740 |
RGD:9590215 |
NCBI chr X:41,725,660...41,749,736
Ensembl chr X:41,726,526...41,749,381
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G |
CST3 |
cystatin C |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr17:30,471,056...30,474,486
Ensembl chr17:30,470,855...30,474,590
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|
|
G |
SGTA |
small glutamine rich tetratricopeptide repeat co-chaperone alpha |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:75,879,081...75,896,279
Ensembl chr 2:75,879,058...75,896,277
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G |
SVIP |
small VCP interacting protein |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:36,703,757...36,714,018
Ensembl chr 2:36,703,790...36,714,934
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G |
USP14 |
ubiquitin specific peptidase 14 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:106,087,921...106,139,717
Ensembl chr 6:106,087,924...106,139,379
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G |
AQP11 |
aquaporin 11 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 9:12,065,550...12,076,339
Ensembl chr 9:12,065,546...12,078,401
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G |
UBXN1 |
UBX domain protein 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:9,072,549...9,075,595
Ensembl chr 2:9,072,968...9,075,594
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G |
USP25 |
ubiquitin specific peptidase 25 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr13:180,571,019...180,708,966
Ensembl chr13:180,571,342...180,712,435
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G |
ADRA1B |
adrenoceptor alpha 1B |
acts_upstream_of_or_within |
ISO |
(MGI:3027459|PMID:14581480) |
MGI |
PMID:14581480 |
MGI:3027459 |
NCBI chr16:63,550,123...64,010,838
Ensembl chr16:63,550,130...63,603,034
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G |
INS |
insulin |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841
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G |
ANXA2 |
annexin A2 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:111,588,721...111,635,064
Ensembl chr 1:111,588,306...111,635,059
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G |
FURIN |
furin, paired basic amino acid cleaving enzyme |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 7:53,455,634...53,472,791
Ensembl chr 7:53,460,017...53,472,787
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G |
LAPTM4B |
lysosomal protein transmembrane 4 beta |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:38,932,735...39,015,219
Ensembl chr 4:38,932,742...39,023,925
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G |
MGAT3 |
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase |
acts_upstream_of_or_within |
ISO |
(MGI:5751042|PMID:25592972), (MGI:5816436|PMID:26467158) |
MGI |
PMID:25592972 PMID:26467158 |
MGI:5751042 MGI:5816436 |
NCBI chr 5:8,777,964...8,807,144
Ensembl chr 5:8,777,965...8,807,100
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G |
USP8 |
ubiquitin specific peptidase 8 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:121,306,031...121,376,154
Ensembl chr 1:121,306,032...121,413,223
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G |
VPS35 |
VPS35 retromer complex component |
involved_in |
ISO |
(MGI:5694519|PMID:26203154) |
ParkinsonsUK-UCL |
PMID:26203154 |
MGI:5694519 |
NCBI chr 6:37,944,099...37,977,091
Ensembl chr 6:37,944,127...37,986,171
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G |
IL10 |
interleukin 10 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 9:67,400,727...67,405,941
Ensembl chr 9:67,400,728...67,405,378
|
|
G |
LOC110261265 |
metalloproteinase inhibitor 1-like |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
|
NCBI chr 6:10,760,556...10,762,615
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G |
LRIG2 |
leucine rich repeats and immunoglobulin like domains 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:5702499|PMID:26651291) |
Ensembl Ensembl MGI |
PMID:26651291 |
GO_REF:0000107 MGI:5702499 |
NCBI chr 4:107,348,662...107,511,308
Ensembl chr 4:107,348,669...107,492,516
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G |
PTPN3 |
protein tyrosine phosphatase non-receptor type 3 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:250,418,131...250,583,148
Ensembl chr 1:250,418,133...250,540,480
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G |
TIMP1 |
TIMP metallopeptidase inhibitor 1 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr X:42,103,251...42,106,289
Ensembl chr X:42,102,172...42,106,296
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|
G |
TIMP2 |
TIMP metallopeptidase inhibitor 2 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
|
NCBI chr12:3,254,794...3,300,835
Ensembl chr12:3,254,493...3,300,834
|
|
G |
TIMP3 |
TIMP metallopeptidase inhibitor 3 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 5:12,185,816...12,242,599
Ensembl chr 5:12,185,818...12,242,581
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G |
TIMP4 |
TIMP metallopeptidase inhibitor 4 |
involved_in |
IBA |
(PMID:21873635) |
GO_Central GO_Central |
PMID:21873635 |
|
NCBI chr13:68,179,803...68,191,199
Ensembl chr13:68,179,806...68,190,942
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G |
TENT2 |
terminal nucleotidyltransferase 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:88,328,250...88,388,242
Ensembl chr 2:88,328,258...88,388,241
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|
|
G |
LRPPRC |
leucine rich pentatricopeptide repeat containing |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:5438202|PMID:22045337) (MGI:5301479|PMID:21880015) |
Ensembl MGI |
PMID:21880015 PMID:22045337 |
GO_REF:0000107 MGI:5301479 MGI:5438202 |
NCBI chr 3:96,474,510...96,590,706
Ensembl chr 3:96,474,549...96,595,143
|
|
G |
SLIRP |
SRA stem-loop interacting RNA binding protein |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
(PMID:21873635) (MGI:5438202|PMID:22045337) |
GO_Central Ensembl MGI Ensembl |
PMID:21873635 PMID:22045337 |
GO_REF:0000107 MGI:5438202 |
NCBI chr 7:100,710,472...100,718,290
Ensembl chr 7:100,710,234...100,720,374
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|
|
G |
FMR1 |
Fragile X messenger ribonucleoprotein 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr X:120,361,232...120,400,282
Ensembl chr X:120,361,367...120,399,831
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|
G |
PKP1 |
plakophilin 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr10:23,689,394...23,735,457
Ensembl chr10:23,689,380...23,735,453
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|
G |
PKP3 |
plakophilin 3 |
involved_in |
IEA |
|
Ensembl Ensembl |
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GO_REF:0000107 |
NCBI chr 2:214,238...222,762
Ensembl chr 2:214,170...223,511
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CSDE1 |
cold shock domain containing E1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:105,804,512...105,845,735
Ensembl chr 4:105,804,587...105,845,733
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G |
DHX9 |
DExH-box helicase 9 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,141,967...124,185,349
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G |
HNRNPD |
heterogeneous nuclear ribonucleoprotein D |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,626
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G |
HNRNPU |
heterogeneous nuclear ribonucleoprotein U |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030
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IGF2BP1 |
insulin like growth factor 2 mRNA binding protein 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,197,058...25,243,272
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G |
PABPC1 |
poly(A) binding protein cytoplasmic 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,209,164...36,228,073
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G |
PAIP1 |
poly(A) binding protein interacting protein 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr16:28,098,580...28,134,296
Ensembl chr16:28,098,581...28,133,788
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SYNCRIP |
synaptotagmin binding cytoplasmic RNA interacting protein |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,114...54,598,407
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G |
YBX1 |
Y-box binding protein 1 |
involved_in |
ISO |
(PMID:19029303) |
ComplexPortal |
PMID:19029303 |
|
NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,774...168,736,604
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A1CF |
APOBEC1 complementation factor |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr14:98,908,585...98,990,362
Ensembl chr14:98,908,630...98,987,524
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APOBEC1 |
apolipoprotein B mRNA editing enzyme catalytic subunit 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 5:62,811,819...62,820,532
Ensembl chr 5:62,810,879...62,820,173
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|
G |
DHX34 |
DExH-box helicase 34 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:53,131,193...53,161,369
Ensembl chr 6:53,131,241...53,161,368
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|
G |
HNRNPAB |
heterogeneous nuclear ribonucleoprotein A/B |
involved_in |
ISO |
(PMID:12881431) |
ComplexPortal |
PMID:12881431 |
|
NCBI chr 2:80,186,998...80,194,155
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G |
NBAS |
NBAS subunit of NRZ tethering complex |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:121,882,734...122,242,325
Ensembl chr 3:121,882,744...122,242,326
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G |
PABPC1 |
poly(A) binding protein cytoplasmic 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,209,164...36,228,073
|
|
G |
SECISBP2 |
SECIS binding protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:5582859|PMID:24274065) |
Ensembl Ensembl MGI |
PMID:24274065 |
GO_REF:0000107 MGI:5582859 |
NCBI chr14:911,985...955,978
Ensembl chr14:912,015...955,974
|
|
G |
SYNCRIP |
synaptotagmin binding cytoplasmic RNA interacting protein |
involved_in |
ISO |
(PMID:12881431) |
ComplexPortal |
PMID:12881431 |
|
NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,114...54,598,407
|
|
G |
UPF3A |
UPF3A regulator of nonsense mediated mRNA decay |
involved_in |
ISO |
(MGI:5790140|PMID:27040500) |
MGI |
PMID:27040500 |
MGI:5790140 |
NCBI chr11:79,117,708...79,137,083
Ensembl chr11:79,118,603...79,136,222
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|
|
G |
TENT4A |
terminal nucleotidyltransferase 4A |
involved_in |
ISO |
(PMID:30026317) |
UniProt |
PMID:30026317 |
|
NCBI chr16:75,217,212...75,259,805
Ensembl chr16:75,217,219...75,258,556
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|
G |
TENT4B |
terminal nucleotidyltransferase 4B |
involved_in |
ISO |
(PMID:30026317) |
UniProt |
PMID:30026317 |
|
NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,605,529...34,669,278
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|
G |
TOB1 |
transducer of ERBB2, 1 |
involved_in |
ISO |
(PMID:18377426) |
UniProt |
PMID:18377426 |
|
NCBI chr12:27,116,579...27,119,906
Ensembl chr12:27,116,584...27,117,614
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|
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ALAD |
aminolevulinate dehydratase |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:254,015,426...254,027,584
Ensembl chr 1:254,012,850...254,027,508
|
|
G |
F8A1 |
coagulation factor VIII-associated 1 |
involved_in |
ISO |
(PMID:27815841) |
UniProt |
PMID:27815841 |
|
NCBI chr X:125,280,978...125,282,771
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G |
GABARAPL2 |
GABA type A receptor associated protein like 2 |
involved_in |
ISO |
(PMID:21669198) |
BHF-UCL |
PMID:21669198 |
|
NCBI chr 6:12,122,219...12,132,986
Ensembl chr 6:12,107,422...12,132,991
|
|
G |
HSP90AB1 |
heat shock protein 90 alpha family class B member 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 7:39,237,299...39,250,479
Ensembl chr 7:39,244,458...39,250,481
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|
G |
LAMP3 |
lysosomal associated membrane protein 3 |
involved_in |
ISO |
(PMID:25681212) |
ParkinsonsUK-UCL |
PMID:25681212 |
|
NCBI chr13:121,081,717...121,117,660
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|
G |
MARCHF7 |
membrane associated ring-CH-type finger 7 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr15:66,649,363...66,699,647
Ensembl chr15:66,649,049...66,699,950
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|
G |
OPHN1 |
oligophrenin 1 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr X:54,056,504...54,617,045
Ensembl chr X:54,055,092...54,616,959
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|
G |
PRKCG |
protein kinase C gamma |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:56,213,479...56,235,683
Ensembl chr 6:56,213,480...56,234,210
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|
G |
PSME3IP1 |
proteasome activator subunit 3 interacting protein 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:19,098,097...19,154,288
Ensembl chr 6:19,102,013...19,154,177
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|
G |
PSMF1 |
proteasome inhibitor subunit 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr17:34,118,324...34,164,723
Ensembl chr17:34,098,991...34,169,287
|
|
G |
SCO1 |
synthesis of cytochrome C oxidase 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5643882|PMID:25683716) |
MGI |
PMID:25683716 |
MGI:5643882 |
NCBI chr12:55,406,730...55,424,120
Ensembl chr12:55,405,483...55,424,118
|
|
G |
USP19 |
ubiquitin specific peptidase 19 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr13:31,726,668...31,738,135
Ensembl chr13:31,726,672...31,737,981
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|
|
G |
BAG5 |
BAG cochaperone 5 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
|
|
G |
BAG6 |
BAG cochaperone 6 |
involved_in |
ISS IEA |
|
UniProt UniProt Ensembl |
|
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:23,756,897...23,768,659
Ensembl chr 7:23,756,899...23,775,892
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|
G |
CAMLG |
calcium modulating ligand |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:136,957,626...136,967,944
Ensembl chr 2:136,957,508...136,968,382
|
|
G |
CCAR2 |
cell cycle and apoptosis regulator 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr14:6,860,052...6,874,334
Ensembl chr14:6,859,664...6,874,327
|
|
G |
CLEC16A |
C-type lectin domain containing 16A |
acts_upstream_of_or_within |
ISO |
(MGI:5603233|PMID:24949970) |
MGI |
PMID:24949970 |
MGI:5603233 |
NCBI chr 3:31,938,133...32,158,343
Ensembl chr 3:31,938,135...32,158,320
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|
G |
DDRGK1 |
DDRGK domain containing 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr17:32,479,981...32,491,401
Ensembl chr17:32,479,977...32,491,396
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|
G |
EIF3H |
eukaryotic translation initiation factor 3 subunit H |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:21,955,026...22,053,683
Ensembl chr 4:21,954,874...22,058,699
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|
G |
FHIT |
fragile histidine triad diadenosine triphosphatase |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr13:41,443,963...42,884,799
Ensembl chr13:41,443,965...42,392,817
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|
G |
GIPC1 |
GIPC PDZ domain containing family member 1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:64,780,447...64,794,922
Ensembl chr 2:64,780,442...64,794,919
|
|
G |
HSP90AB1 |
heat shock protein 90 alpha family class B member 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:16280321) |
Ensembl Ensembl MGI |
PMID:16280321 |
GO_REF:0000107 |
NCBI chr 7:39,237,299...39,250,479
Ensembl chr 7:39,244,458...39,250,481
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|
G |
KLHL40 |
kelch like family member 40 |
involved_in acts_upstream_of_or_within |
IBA ISO |
(PMID:21873635) (MGI:5586592|PMID:24960163) |
GO_Central GO_Central MGI |
PMID:21873635 PMID:24960163 |
MGI:5586592 |
NCBI chr13:26,202,607...26,211,528
Ensembl chr13:26,202,677...26,211,522
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|
G |
MAP1A |
microtubule associated protein 1A |
involved_in |
ISO |
(MGI:5703671|PMID:26609151) |
ARUK-UCL |
PMID:26609151 |
MGI:5703671 |
NCBI chr 1:127,916,639...127,936,952
Ensembl chr 1:127,916,644...127,936,955
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|
G |
MTM1 |
myotubularin 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5510937|PMID:23695157) |
MGI |
PMID:23695157 |
MGI:5510937 |
NCBI chr X:122,286,904...122,379,302
Ensembl chr X:122,286,916...122,379,299
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|
G |
N4BP1 |
NEDD4 binding protein 1 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 6:36,122,189...36,177,965
Ensembl chr 6:36,122,035...36,174,504
|
|
G |
NOP53 |
NOP53 ribosome biogenesis factor |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:53,443,453...53,451,707
Ensembl chr 6:53,443,385...53,452,017
|
|
G |
OGT |
O-linked N-acetylglucosamine (GlcNAc) transferase |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr X:57,521,091...57,558,467
Ensembl chr X:57,521,098...57,558,515
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|
G |
PARK7 |
Parkinsonism associated deglycase |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:68,629,327...68,645,147
Ensembl chr 6:68,629,214...68,645,516
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G |
PBK |
PDZ binding kinase |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:5293269|PMID:21715333) |
Ensembl Ensembl MGI |
PMID:21715333 |
GO_REF:0000107 MGI:5293269 |
NCBI chr14:11,543,657...11,577,286
Ensembl chr14:11,543,603...11,566,702
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|
G |
PHF20L1 |
PHD finger protein 20 like 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:8,394,874...8,468,309
Ensembl chr 4:8,394,897...8,468,297
|
|
G |
RPL11 |
ribosomal protein L11 |
involved_in |
ISS IEA |
|
UniProt UniProt Ensembl |
|
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 6:81,523,510...81,526,925
Ensembl chr 6:81,522,742...81,530,436
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|
G |
RYBP |
RING1 and YY1 binding protein |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr13:53,724,062...53,809,698
Ensembl chr13:53,724,065...53,809,601
|
|
G |
SDCBP |
syndecan binding protein |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:74,295,941...74,357,720
Ensembl chr 4:74,295,922...74,341,085
|
|
G |
SENP1 |
SUMO specific peptidase 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3818351|PMID:17981124) |
MGI |
PMID:17981124 |
MGI:3818351 |
NCBI chr 5:78,419,849...78,476,315
Ensembl chr 5:78,423,383...78,476,195
|
|
G |
SHH |
sonic hedgehog signaling molecule |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:3624046|PMID:16611981) |
Ensembl MGI |
PMID:16611981 |
GO_REF:0000107 MGI:3624046 |
NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484
|
|
G |
SMARCC1 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:5310666|PMID:22285184) |
Ensembl Ensembl MGI |
PMID:22285184 |
GO_REF:0000107 MGI:5310666 |
NCBI chr13:30,409,979...30,576,270
Ensembl chr13:30,409,983...30,601,441
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|
G |
TAF9 |
TATA-box binding protein associated factor 9 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr16:47,494,841...47,499,568
Ensembl chr16:47,490,027...47,495,880
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|
G |
TLK2 |
tousled like kinase 2 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr12:16,129,249...16,256,642
Ensembl chr12:16,129,256...16,256,359
|
|
G |
TRIM39 |
tripartite motif containing 39 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl GO_Central |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 7:23,047,048...23,062,974
Ensembl chr 7:23,047,520...23,062,487
|
|
G |
TTC36 |
tetratricopeptide repeat domain 36 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(MGI:6362140|PMID:31537781) |
Ensembl MGI |
PMID:31537781 |
GO_REF:0000107 MGI:6362140 |
NCBI chr 9:45,829,014...45,838,978
Ensembl chr 9:45,829,191...45,838,979
|
|
G |
UBXN1 |
UBX domain protein 1 |
involved_in |
IEA IBA |
(PMID:21873635) |
Ensembl GO_Central Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 2:9,072,549...9,075,595
Ensembl chr 2:9,072,968...9,075,594
|
|
G |
UCHL5 |
ubiquitin C-terminal hydrolase L5 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr10:725,688...761,633
Ensembl chr10:725,561...763,985
|
|
G |
USP7 |
ubiquitin specific peptidase 7 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:33,754,357...33,810,480
Ensembl chr 3:33,775,829...33,810,465
|
|
G |
USP9X |
ubiquitin specific peptidase 9 X-linked |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr X:36,736,049...36,888,702
Ensembl chr X:36,760,865...36,885,250
|
|
G |
WAC |
WW domain containing adaptor with coiled-coil |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr10:39,932,562...40,024,114
Ensembl chr10:39,932,599...40,022,338
|
|
|
G |
ADGRB1 |
adhesion G protein-coupled receptor B1 |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:1,582,321...1,658,639
Ensembl chr 4:1,582,330...1,647,573
|
|
G |
AGAP2 |
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 |
acts_upstream_of_or_within |
ISO |
(PMID:18374643) |
MGI |
PMID:18374643 |
|
NCBI chr 5:23,015,777...23,035,943
Ensembl chr 5:23,017,176...23,033,517
|
|
G |
ATRAID |
all-trans retinoic acid induced differentiation factor |
involved_in |
IEA |
|
Ensembl Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:111,914,710...111,919,766
Ensembl chr 3:111,914,708...111,919,946
|
|
G |
AZIN1 |
antizyme inhibitor 1 |
involved_in |
IBA IEA ISO |
(PMID:21873635) downregulates antizyme degradation of ODC |
GO_Central GO_Central Ensembl RGD |
PMID:8631929 PMID:21873635 |
GO_REF:0000107 RGD:633334 |
NCBI chr 4:34,221,368...34,257,261
Ensembl chr 4:34,234,679...34,257,134
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|
G |
AZIN2 |
antizyme inhibitor 2 |
involved_in |
IBA IEA |
(PMID:21873635) |
GO_Central Ensembl Ensembl |
PMID:21873635 |
GO_REF:0000107 |
NCBI chr 6:89,346,860...89,385,323
Ensembl chr 6:89,345,862...89,385,319
|
|
G |
BANP |
BTG3 associated nuclear protein |
involved_in acts_upstream_of_or_within |
IBA ISO |
(PMID:21873635) (MGI:3579758|PMID:15701641) |
GO_Central GO_Central MGI |
PMID:15701641 PMID:21873635 |
MGI:3579758 |
NCBI chr 6:1,421,460...1,495,484
Ensembl chr 6:1,421,462...1,495,486
|
|
G |
CDK2 |
cyclin dependent kinase 2 |
involved_in |
IMP |
(PMID:15750306) |
AgBase AgBase |
PMID:15750306 |
|
NCBI chr 5:21,365,723...21,372,170
Ensembl chr 5:21,365,764...21,372,168
|
|
G |
CDK5RAP3 |
CDK5 regulatory subunit associated protein 3 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr12:24,224,262...24,234,468
Ensembl chr12:24,224,263...24,234,467
|
|
G |
CYP51A1 |
cytochrome P450 family 51 subfamily A member 1 |
involved_in |
ISO |
(MGI:6270905|PMID:20876579) |
ARUK-UCL |
PMID:20876579 |
MGI:6270905 |
NCBI chr 9:72,057,506...72,079,587
Ensembl chr 9:72,057,511...72 | |