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ONTOLOGY REPORT - ANNOTATIONS


Term:macromolecule catabolic process
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Accession:GO:0009057 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
Synonyms:exact_synonym: biopolymer catabolic process;   macromolecule breakdown;   macromolecule catabolism;   macromolecule degradation
 narrow_synonym: multicellular organismal macromolecule catabolic process
 related_synonym: cellular macromolecule catabolic process;   cellular macromolecule catabolism;   cellular macromolecule degradation
 alt_id: GO:0043285;   GO:0044266



show annotations for term's descendants           Sort by:
macromolecule catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN6 CLN6 transmembrane ER protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3656423|PMID:15647513) MGI
Ensembl
PMID:15647513 GO_REF:0000107 MGI:3656423 NCBI chr 1:166,107,895...166,126,054
Ensembl chr 1:166,107,228...166,126,808
JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3656423|PMID:15647513) MGI
Ensembl
PMID:15647513 GO_REF:0000107 MGI:3656423 NCBI chr15:33,282,524...33,325,598
Ensembl chr15:33,288,301...33,304,631
JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3656423|PMID:15647513) MGI
Ensembl
PMID:15647513 GO_REF:0000107 MGI:3656423 NCBI chr 6:95,840,906...95,860,858
Ensembl chr 6:95,840,908...95,860,858
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:103,675,164...103,871,245
Ensembl chr14:103,675,175...103,871,227
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,794...94,350,308
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:142,384,526...142,387,407
Ensembl chr 2:142,384,532...142,387,199
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,626
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:28275056)
(PMID:16126846)
CACAO
UniProt
PMID:16126846 PMID:28275056 NCBI chr 2:72,656,951...72,668,854
Ensembl chr 2:72,656,752...72,668,964
JBrowse link
G KLHL17 kelch like family member 17 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:63,320,898...63,328,093
Ensembl chr 6:63,322,184...63,328,259
JBrowse link
G MOV10 Mov10 RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:107,738,089...107,763,873
Ensembl chr 4:107,738,092...107,763,602
JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:63,328,054...63,336,140
Ensembl chr 6:63,328,605...63,336,138
JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,514...4,883,392
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:116,204,807...116,292,455
Ensembl chr 9:116,208,799...116,292,381
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,860...71,227,704
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,762,043...18,835,788
Ensembl chr13:18,761,950...18,831,564
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,023...59,013,495
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,193
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:16,463,532...16,498,974
Ensembl chr 1:16,465,252...16,498,971
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,017...92,495,554
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,407...97,204,698
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGEL2 angel homolog 2 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:130,453,912...130,476,383
Ensembl chr 9:130,453,920...130,474,921
JBrowse link
G BOLL boule homolog, RNA binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:101,535,392...101,602,232
Ensembl chr15:101,535,705...101,602,232
JBrowse link
G DAZL deleted in azoospermia like involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr13:3,762,896...3,783,848
Ensembl chr13:3,764,784...3,782,818
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,096...71,248,906
JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:161,784,146...161,928,953
Ensembl chr 6:161,785,770...161,928,910
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chr 2:139,779,865...139,783,016
Ensembl chr 2:139,779,867...139,783,159
JBrowse link
G HNRNPC heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) UniProt PMID:16010978 NCBI chr 7:77,921,098...77,978,550
Ensembl chr 7:77,921,145...77,973,078
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:67,314,651...67,365,060
Ensembl chr 9:67,314,484...67,365,059
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:22,976,951...22,979,568
Ensembl chr13:22,966,137...22,983,109
JBrowse link
G PCBP2 poly(rC) binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:18,670,124...18,703,745
Ensembl chr 5:18,673,981...18,704,978
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chr 2:77,551,562...77,563,153
Ensembl chr 2:77,551,562...77,563,134
JBrowse link
G RBM10 RNA binding motif protein 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367529|PMID:19508861) MGI
Ensembl
PMID:19508861 GO_REF:0000107 MGI:4367529 NCBI chr  X:41,773,232...41,803,656
Ensembl chr  X:41,773,232...41,803,653
JBrowse link
G RBM38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chr17:57,783,156...57,802,495
Ensembl chr17:57,783,154...57,797,990
JBrowse link
G RBM47 RNA binding motif protein 47 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:31,508,133...31,690,757
Ensembl chr 8:31,508,148...31,690,409
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,860...71,227,704
JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,374,559...53,394,172
Ensembl chr 9:53,375,644...53,394,165
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250
JBrowse link
acrosome matrix dispersal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACR acrosin ISO RGD PMID:28859281 RGD:13464336 NCBI chr 5:30,127...36,005
Ensembl chr 5:30,127...36,005
JBrowse link
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANAPC1 anaphase promoting complex subunit 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:44,483,961...44,605,035
Ensembl chr 3:44,509,680...44,605,014
JBrowse link
G ANAPC10 anaphase promoting complex subunit 10 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:83,353,217...83,497,570
Ensembl chr 8:83,353,231...83,436,518
JBrowse link
G ANAPC11 anaphase promoting complex subunit 11 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:1,095,091...1,099,233 JBrowse link
G ANAPC4 anaphase promoting complex subunit 4 involved_in IEA
IBA
InterPro
GO_Central
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 8:19,301,253...19,341,463
Ensembl chr 8:19,301,248...19,341,478
JBrowse link
G ANAPC5 anaphase promoting complex subunit 5 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr14:31,259,695...31,306,434
Ensembl chr14:31,259,727...31,306,441
JBrowse link
G CDC16 cell division cycle 16 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr11:79,084,243...79,111,758
Ensembl chr11:79,084,182...79,115,268
JBrowse link
G CDC20 cell division cycle 20 involved_in IEA
IBA
IMP
(PMID:18753608) Ensembl
TreeGrafter
GO_Central
AgBase
PMID:18753608 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:167,886,266...167,890,587
Ensembl chr 6:167,886,270...167,890,583
JBrowse link
G CDC20B cell division cycle 20B involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr16:34,294,486...34,354,588
Ensembl chr16:34,294,272...34,349,242
JBrowse link
G CDC23 cell division cycle 23 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:140,211,334...140,245,728
Ensembl chr 2:140,211,331...140,230,789
JBrowse link
G CDC26 cell division cycle 26 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:253,893,666...253,906,659
Ensembl chr 1:253,895,885...253,906,632
JBrowse link
G CDC27 cell division cycle 27 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr12:16,810,868...16,882,271
Ensembl chr12:16,810,910...16,882,269
JBrowse link
G CUL3 cullin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10500095) MGI
Ensembl
PMID:10500095 GO_REF:0000107 NCBI chr15:126,191,605...126,287,148
Ensembl chr15:126,189,851...126,287,005
JBrowse link
G ECRG4 ECRG4 augurin precursor acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(MGI:4454240|PMID:20404145) MGI
GO_Central
TreeGrafter
Ensembl
PMID:20404145 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:4454240 NCBI chr 3:48,960,413...48,971,878
Ensembl chr 3:48,960,429...48,971,511
JBrowse link
G FBXO31 F-box protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:1,949,254...1,995,459
Ensembl chr 6:1,949,276...1,995,462
JBrowse link
G FZR1 fizzy and cell division cycle 20 related 1 involved_in IMP
IBA
IEA
(PMID:18753608) AgBase
GO_Central
TreeGrafter
Ensembl
PMID:18753608 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:75,122,599...75,164,134
Ensembl chr 2:75,121,835...75,146,835
JBrowse link
G UBE2C ubiquitin conjugating enzyme E2 C involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,018,403...48,021,542
Ensembl chr17:48,018,400...48,021,534
JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:59,565,001...59,570,484
Ensembl chr 6:59,565,033...59,570,489
JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:70,725,403...70,736,264
Ensembl chr 6:70,724,590...70,736,236
JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:15572351) RGD
GO_Central
TreeGrafter
Ensembl
InterPro
MGI
PMID:11425895 PMID:15572351 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:628524 NCBI chr 6:65,310,868...65,323,816
Ensembl chr 6:65,310,864...65,323,806
JBrowse link
G DICER1 dicer 1, ribonuclease III involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,365,802...116,411,224
JBrowse link
G DNASE1L3 deoxyribonuclease 1L3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2385551|PMID:12050166) MGI
TreeGrafter
Ensembl
PMID:12050166 GO_REF:0000107 GO_REF:0000118 MGI:2385551 NCBI chr13:39,958,384...39,976,114
Ensembl chr13:39,958,387...39,975,946
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal involved_in IBA
IEA
GO_Central
UniProt
TreeGrafter
GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 2:66,150,071...66,152,857
Ensembl chr 2:66,149,862...66,152,855
JBrowse link
G DNASE2B deoxyribonuclease 2 beta involved_in IEA
IBA
UniProt
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 6:129,329,737...129,343,003
Ensembl chr 6:129,329,867...129,340,980
JBrowse link
G ENDOG endonuclease G involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(MGI:3029597|PMID:14663139) Ensembl
GO_Central
TreeGrafter
MGI
PMID:14663139 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3029597 NCBI chr 1:269,153,955...269,157,789
Ensembl chr 1:269,154,090...269,157,788
JBrowse link
G EXOG exo/endonuclease G involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr13:23,278,458...23,330,540
Ensembl chr13:23,278,932...23,307,566
JBrowse link
G FOXL2 forkhead box L2 involved_in ISS UniProt GO_REF:0000024 NCBI chr13:79,708,693...79,709,825
Ensembl chr13:79,708,693...79,709,825
JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:77,856,093...77,978,194
Ensembl chr 3:77,856,138...77,975,429
JBrowse link
CAT tailing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEMF nuclear export mediator factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:179,622,728...179,671,225
Ensembl chr 1:179,622,755...179,670,996
JBrowse link
chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 1:72,343,950...72,520,402
Ensembl chr 1:72,270,799...72,520,396
JBrowse link
G ATG7 autophagy related 7 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr13:67,301,756...67,699,141
Ensembl chr13:67,417,938...67,707,654
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within
ISO PMID:18644871 ParkinsonsUK-UCL
MGI
PMID:18644871 RGD:10412301 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3813419|PMID:18579532) MGI
Ensembl
PMID:18579532 GO_REF:0000107 MGI:3813419 NCBI chr  X:98,586,718...98,623,939
Ensembl chr  X:98,556,710...98,623,940
JBrowse link
G SYNPO2 synaptopodin 2 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 8:104,677,580...104,844,169
Ensembl chr 8:104,677,583...104,873,791
JBrowse link
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHI3L1 chitinase 3 like 1 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 9:113,885,541...113,895,033
Ensembl chr 9:113,885,542...113,895,131
JBrowse link
G CHI3L2 chitinase 3 like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:109,081,543...109,099,172
Ensembl chr 4:109,081,450...109,099,098
JBrowse link
G CHIA chitinase acidic involved_in ISO
IEA
IBA
RGD
TreeGrafter
GO_Central
UniProt
Ensembl
PMID:11085997 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:5000759 NCBI chr 4:109,035,323...109,046,499
Ensembl chr 4:109,035,326...109,046,499
JBrowse link
G CHIT1 chitinase 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 9:113,927,715...113,941,445
Ensembl chr 9:113,927,720...113,941,433
JBrowse link
G CTBS chitobiase involved_in ISO
IEA
IBA
RGD
TreeGrafter
GO_Central
PMID:2751306 GO_REF:0000033 GO_REF:0000118 RGD:2301430 NCBI chr 6:129,173,399...129,207,868
Ensembl chr 6:129,173,444...129,207,863
JBrowse link
G LOC100621421 acidic mammalian chitinase-like involved_in IEA UniProt
TreeGrafter
GO_REF:0000117 GO_REF:0000118 NCBI chr 4:108,981,825...109,041,096 JBrowse link
G OVGP1 oviductal glycoprotein 1 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 4:108,929,034...108,941,040
Ensembl chr 4:108,929,357...108,941,038
JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUSB glucuronidase beta involved_in ISO (MGI:7281718|PMID:23897660) MGI PMID:23897660 MGI:7281718 NCBI chr 3:16,672,071...16,686,520
Ensembl chr 3:16,671,389...16,689,203
JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759
JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793
JBrowse link
G HYAL4 hyaluronidase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5490850|PMID:23086929) MGI
Ensembl
PMID:23086929 GO_REF:0000107 MGI:5490850 NCBI chr18:23,623,379...23,662,528
Ensembl chr18:23,625,399...23,660,792
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSDE1 cold shock domain containing E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:105,804,512...105,845,735
Ensembl chr 4:105,804,587...105,845,733
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,141,967...124,185,349
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,626
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,197,058...25,243,272
JBrowse link
G IGF2BP2 insulin like growth factor 2 mRNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:123,485,619...123,650,050
Ensembl chr13:123,485,628...123,650,039
JBrowse link
G IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,104,786...92,272,264
Ensembl chr 9:92,104,848...92,272,211
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,209,164...36,228,073
JBrowse link
G PAIP1 poly(A) binding protein interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:28,098,580...28,134,296
Ensembl chr16:28,098,581...28,133,788
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,114...54,598,407
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,774...168,736,604
JBrowse link
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RNF126 ring finger protein 126 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,673,302...77,683,312
Ensembl chr 2:77,673,353...77,683,311
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3807625|PMID:18625844) MGI
Ensembl
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G DCP1A decapping mRNA 1A involved_in IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,391,320...35,455,743
JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA
IBA
InterPro
GO_Central
TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,613
JBrowse link
G DCPS decapping enzyme, scavenger involved_in IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:53,400,750...53,437,161
Ensembl chr 9:53,400,755...53,437,548
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:48,348,653...48,360,004
Ensembl chr15:48,348,648...48,365,106
JBrowse link
G NOCT nocturnin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3807625|PMID:18625844) MGI
Ensembl
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,420...87,909,241
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr11:5,487,019...5,614,458
Ensembl chr11:5,487,138...5,614,452
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:11,826,816...11,857,699
Ensembl chr 2:11,827,773...11,857,691
JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 1:126,890,464...126,998,014
Ensembl chr 1:126,902,186...127,003,397
Ensembl chr 1:126,902,186...127,003,397
JBrowse link
G STAR steroidogenic acute regulatory protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,377,521...48,385,462
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCP1A decapping mRNA 1A involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,391,320...35,455,743
JBrowse link
G DCP1B decapping mRNA 1B involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
JBrowse link
G EDC3 enhancer of mRNA decapping 3 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 7:58,828,693...58,895,475
Ensembl chr 7:58,828,727...58,897,919
JBrowse link
G EDC4 enhancer of mRNA decapping 4 involved_in IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:28,489,427...28,501,511
Ensembl chr 6:28,489,422...28,501,510
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARSB arylsulfatase B involved_in ISO (MGI:5608575|PMID:24240681) MGI PMID:24240681 MGI:5608575 NCBI chr 2:87,614,938...87,779,553
Ensembl chr 2:87,614,963...87,778,447
JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:60,878,531...60,911,537
Ensembl chr 7:60,878,284...60,913,339
JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759
JBrowse link
G IDS iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,572,797...121,596,525
Ensembl chr  X:121,572,807...121,596,513
JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4414887|PMID:19751987)
(MGI:4397742|PMID:19834056)
MGI
Ensembl
PMID:19751987 PMID:19834056 GO_REF:0000107 MGI:4397742 MGI:4414887 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969
JBrowse link
dextrin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MGAM maltase-glucoamylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:7,871,529...7,997,137
Ensembl chr18:7,871,532...7,970,169
JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:78,451,845...78,454,938
Ensembl chr 7:78,451,851...78,454,938
JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:65,310,868...65,323,816
Ensembl chr 6:65,310,864...65,323,806
JBrowse link
G DNASE1 deoxyribonuclease 1 involved_in IEA
IBA
ISS
(PMID:29191910) InterPro
TreeGrafter
GO_Central
Ensembl
UniProt
PMID:29191910 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:38,590,045...38,646,852
Ensembl chr 3:38,586,602...38,646,833
JBrowse link
G DNASE1L1 deoxyribonuclease 1 like 1 involved_in IEA
IBA
InterPro
GO_Central
TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:124,931,410...124,937,569
Ensembl chr  X:124,931,410...124,939,965
JBrowse link
G DNASE1L2 deoxyribonuclease 1 like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5308183|PMID:21307874) MGI
TreeGrafter
Ensembl
InterPro
PMID:21307874 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 MGI:5308183 NCBI chr 3:39,757,725...39,761,497
Ensembl chr 3:39,757,296...39,761,080
JBrowse link
G DNASE1L3 deoxyribonuclease 1L3 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr13:39,958,384...39,976,114
Ensembl chr13:39,958,387...39,975,946
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3521632|PMID:15568025), (MGI:3818215|PMID:18991290) Ensembl
MGI
PMID:15568025 PMID:18991290 GO_REF:0000107 MGI:3521632 MGI:3818215 NCBI chr 2:66,150,071...66,152,857
Ensembl chr 2:66,149,862...66,152,855
JBrowse link
G FBH1 F-box DNA helicase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23361013) MGI
Ensembl
PMID:23361013 GO_REF:0000107 NCBI chr10:65,060,714...65,108,975
Ensembl chr10:65,060,312...65,108,379
JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:191,155,853...191,195,601
Ensembl chr 1:191,183,599...191,195,475
JBrowse link
G LOC100514009 histone-lysine N-methyltransferase SETMAR involved_in ISO (PMID:20521842), (PMID:21491884)
(PMID:24573677)
UniProt PMID:20521842 PMID:21491884 PMID:24573677 NCBI chr13:60,914,412...60,933,064 JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23361013) InterPro
UniProt
Ensembl
MGI
PMID:23361013 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:6,462,825...6,470,780
Ensembl chr 2:6,463,413...6,469,112
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:273,011,736...273,021,956
Ensembl chr 1:273,011,734...273,021,938
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4848004|PMID:20871604)
(MGI:5637600|PMID:25848017)
(MGI:3834787|PMID:18724932), (MGI:4414715|PMID:19923437), (MGI:5562498|PMID:23993650)
MGI
Ensembl
PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 GO_REF:0000107 MGI:3834787 MGI:4414715 MGI:4848004 MGI:5562498 MGI:5637600 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,179,291...31,180,747
JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:131,295,257...131,303,663
Ensembl chr 3:131,295,257...131,304,309
JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,550,405...71,607,067
Ensembl chr14:71,552,121...71,610,740
JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chr 2:9,752,004...9,756,863
Ensembl chr 2:9,752,013...9,756,728
JBrowse link
G RNASEH1 ribonuclease H1 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:131,268,908...131,277,072
Ensembl chr 3:131,268,926...131,281,930
JBrowse link
G RNASEH2A ribonuclease H2 subunit A involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:66,192,785...66,208,417
Ensembl chr 2:66,193,197...66,207,697
JBrowse link
elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELA1 chymotrypsin like elastase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5641427|PMID:24793170) MGI
Ensembl
PMID:24793170 GO_REF:0000107 MGI:5641427
G CTSL cathepsin L involved_in ISO (MGI:6259330|PMID:12417635) UniProt PMID:12417635 MGI:6259330 NCBI chr10:27,668,523...27,674,705
Ensembl chr10:27,668,264...27,674,618
JBrowse link
G CTSV cathepsin V involved_in ISS UniProt GO_REF:0000024 NCBI chr10:25,202,360...25,208,058
Ensembl chr10:25,202,389...25,209,210
JBrowse link
G MMP12 matrix metallopeptidase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:33,473,625...33,483,630
Ensembl chr 9:33,473,093...33,483,679
JBrowse link
epidermal growth factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAB7A RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:71,777,422...71,886,758
Ensembl chr13:71,777,424...71,852,694
JBrowse link
G SNX5 sorting nexin 5 ISO RGD PMID:16487940 RGD:13508623 NCBI chr17:26,352,945...26,381,677
Ensembl chr17:26,352,949...26,381,670
JBrowse link
ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMFR autocrine motility factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,366,812...29,417,800
Ensembl chr 6:29,366,936...29,413,697
JBrowse link
G AUP1 AUP1 lipid droplet regulating VLDL assembly factor involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 3:68,520,048...68,523,076
Ensembl chr 3:68,519,969...68,523,073
JBrowse link
G BAG6 BAG cochaperone 6 involved_in ISS
IBA
IEA
UniProt
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:23,756,897...23,768,659
Ensembl chr 7:23,756,899...23,775,892
JBrowse link
G BRSK2 BR serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:896,720...953,908
Ensembl chr 2:896,585...953,108
JBrowse link
G CALR calreticulin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:66,098,263...66,102,074
Ensembl chr 2:66,098,229...66,102,132
JBrowse link
G CANX calnexin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:78,879,031...78,915,828
Ensembl chr 2:78,879,033...78,915,827
JBrowse link
G CCDC47 coiled-coil domain containing 47 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5605216|PMID:25009997) MGI
Ensembl
PMID:25009997 GO_REF:0000107 MGI:5605216 NCBI chr12:15,165,268...15,186,141
Ensembl chr12:15,165,405...15,192,356
JBrowse link
G DERL1 derlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:16,310,407...16,341,405
Ensembl chr 4:16,310,314...16,341,433
JBrowse link
G DERL2 derlin 2 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr12:51,508,138...51,524,799
Ensembl chr12:51,507,996...51,524,793
JBrowse link
G DERL3 derlin 3 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr14:49,871,077...49,875,022
Ensembl chr14:49,871,218...49,877,672
JBrowse link
G DNAJB12 DnaJ heat shock protein family (Hsp40) member B12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:75,169,076...75,190,109
Ensembl chr14:75,169,077...75,189,883
JBrowse link
G DNAJB2 DnaJ heat shock protein family (Hsp40) member B2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:121,319,897...121,335,927
Ensembl chr15:121,319,982...121,335,991
JBrowse link
G DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr18:36,578,928...36,584,211
Ensembl chr18:36,579,453...36,584,130
JBrowse link
G DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:88,198,751...88,256,396
Ensembl chr15:88,198,794...88,259,002
JBrowse link
G ECPAS Ecm29 proteasome adaptor and scaffold involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:252,221,687...252,325,068
Ensembl chr 1:252,218,819...252,324,928
JBrowse link
G EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2178766|PMID:11375934) MGI
Ensembl
PMID:11375934 GO_REF:0000107 MGI:2178766 NCBI chr13:61,703,601...61,732,231
Ensembl chr13:61,703,621...61,732,119
JBrowse link
G EDEM2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,483,190...38,515,243
Ensembl chr17:38,480,044...38,515,227
JBrowse link
G EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:125,908,861...125,983,073
Ensembl chr 9:125,908,864...125,983,029
JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (MGI:6467680|PMID:17707796) UniProt PMID:17707796 MGI:6467680 NCBI chr 3:57,423,894...57,506,247
Ensembl chr 3:57,423,943...57,506,245
JBrowse link
G ERLEC1 endoplasmic reticulum lectin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:87,362,166...87,389,814
Ensembl chr 3:87,355,904...87,389,814
JBrowse link
G ERLIN2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:48,643,722...48,662,648
Ensembl chr15:48,643,724...48,662,536
JBrowse link
G FAF1 Fas associated factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:161,173,915...161,603,731
Ensembl chr 6:161,166,996...161,603,725
JBrowse link
G FAF2 Fas associated factor family member 2 involved_in IBA
IEA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 NCBI chr 2:81,401,852...81,454,272
Ensembl chr 2:81,401,859...81,454,262
JBrowse link
G FBXO17 F-box protein 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:47,733,064...47,759,646
Ensembl chr 6:47,732,303...47,759,606
JBrowse link
G FBXO2 F-box protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:3573989|PMID:15723043) MGI
Ensembl
GO_Central
PMID:15723043 GO_REF:0000033 GO_REF:0000107 MGI:3573989 NCBI chr 6:71,740,647...71,747,265
Ensembl chr 6:71,740,677...71,748,923
JBrowse link
G FBXO6 F-box protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,755,335...71,774,264
Ensembl chr 6:71,768,498...71,774,243
JBrowse link
G FOXRED2 FAD dependent oxidoreductase domain containing 2 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 5:11,233,835...11,254,713
Ensembl chr 5:11,233,902...11,254,064
JBrowse link
G GET4 guided entry of tail-anchored proteins factor 4 involved_in ISO (PMID:21636303) ParkinsonsUK-UCL PMID:21636303 NCBI chr 3:533,525...547,527 JBrowse link
G HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,901,171...18,913,427
Ensembl chr 6:18,901,297...18,913,424
JBrowse link
G HSP90B1 heat shock protein 90 beta family member 1 involved_in IEA
IBA
ISS
Ensembl
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:80,511,513...80,531,016
Ensembl chr 5:80,511,506...80,530,991
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:265,930,044...265,934,959
Ensembl chr 1:265,930,045...265,934,894
JBrowse link
G IL18BP interleukin 18 binding protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:6,586,602...6,596,423
Ensembl chr 9:6,488,808...6,591,333
JBrowse link
G JKAMP JNK1/MAPK8 associated membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:188,598,456...188,617,705
Ensembl chr 1:188,598,501...188,624,892
JBrowse link
G LIMK2 LIM domain kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:47,946,370...47,979,702
Ensembl chr14:47,951,481...47,979,699
JBrowse link
G LOC110258087 endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase-like involved_in
acts_upstream_of_or_within
ISO (PMID:18003979), (PMID:21062743)
(MGI:3054306|PMID:15294975)
ParkinsonsUK-UCL
MGI
PMID:15294975 PMID:18003979 PMID:21062743 MGI:3054306
G MAN1A1 mannosidase alpha class 1A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:42,729,722...42,896,290
Ensembl chr 1:42,729,722...42,896,283
JBrowse link
G MARCHF6 membrane associated ring-CH-type finger 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:72,043,294...72,127,869
Ensembl chr16:72,044,093...72,127,863
JBrowse link
G OS9 OS9 endoplasmic reticulum lectin involved_in IBA
IEA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 NCBI chr 5:22,957,903...23,004,464
Ensembl chr 5:22,957,875...23,004,458
JBrowse link
G PSMC6 proteasome 26S subunit, ATPase 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:182,329,070...182,354,959
Ensembl chr 1:182,328,521...182,354,958
JBrowse link
G RCN3 reticulocalbin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,599,347...54,611,275
Ensembl chr 6:54,599,719...54,611,272
JBrowse link
G RHBDD1 rhomboid domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:128,346,315...128,499,151
Ensembl chr15:128,346,373...128,469,213
JBrowse link
G RHBDD2 rhomboid domain containing 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:10,299,201...10,329,638
Ensembl chr 3:10,299,209...10,309,622
JBrowse link
G RNF103 ring finger protein 103 involved_in IBA
IEA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 NCBI chr 3:58,161,087...58,183,750
Ensembl chr 3:58,161,261...58,186,858
JBrowse link
G RNF121 ring finger protein 121 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:6,488,756...6,587,426
Ensembl chr 9:6,488,806...6,587,324
JBrowse link
G RNF139 ring finger protein 139 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:15,157,571...15,182,520
Ensembl chr 4:15,154,331...15,197,511
JBrowse link
G RNF5 ring finger protein 5 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 7:24,215,493...24,217,983
Ensembl chr 7:24,215,704...24,217,971
JBrowse link
G SDF2L1 stromal cell derived factor 2 like 1 acts_upstream_of_or_within ISO PMID:23444373 MGI PMID:23444373 RGD:8554667 NCBI chr14:50,249,607...50,251,636
Ensembl chr14:50,246,710...50,251,642
JBrowse link
G SEC61B SEC61 translocon subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:240,985,173...240,991,820
Ensembl chr 1:240,985,162...240,992,976
JBrowse link
G SEL1L SEL1L adaptor subunit of ERAD E3 ubiquitin ligase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 7:104,219,628...104,283,250
Ensembl chr 7:104,219,411...104,283,195
JBrowse link
G SEL1L2 SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr17:22,515,436...22,615,444
Ensembl chr17:22,516,558...22,627,626
JBrowse link
G SELENOS selenoprotein S involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:139,829,002...139,836,923
Ensembl chr 1:139,828,791...139,836,914
JBrowse link
G SGTA small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,879,081...75,896,279
Ensembl chr 2:75,879,058...75,896,277
JBrowse link
G STT3B STT3 oligosaccharyltransferase complex catalytic subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:17,532,341...17,635,039
Ensembl chr13:17,534,171...17,635,035
JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,092,514...41,095,181
Ensembl chr 3:41,092,449...41,095,136
JBrowse link
G SYVN1 synoviolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,070,903...7,072,811
Ensembl chr 2:7,070,906...7,072,809
JBrowse link
G SYVN1 synoviolin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21245296) Ensembl
MGI
PMID:21245296 GO_REF:0000107 NCBI chr 2:7,059,444...7,066,617
Ensembl chr 2:7,059,462...7,066,601
JBrowse link
G TMEM129 transmembrane protein 129, E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:819,762...826,233
Ensembl chr 8:819,764...826,192
JBrowse link
G TMEM67 transmembrane protein 67 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:42,878,249...42,931,106
Ensembl chr 4:42,879,140...42,931,121
JBrowse link
G TMUB1 transmembrane and ubiquitin like domain containing 1 involved_in IBA
IEA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 NCBI chr18:6,142,451...6,144,895
Ensembl chr18:6,142,023...6,144,894
JBrowse link
G TOR1A torsin family 1 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:269,975,919...269,985,478
Ensembl chr 1:269,974,935...269,985,523
JBrowse link
G TRIM13 tripartite motif containing 13 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr11:17,785,031...17,850,005
Ensembl chr11:17,793,784...17,849,732
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:33,184,039...33,212,440
Ensembl chr12:33,184,049...33,212,398
JBrowse link
G TRMT12 tRNA methyltransferase 12 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:15,158,866...15,197,143
Ensembl chr 4:15,154,331...15,197,511
JBrowse link
G UBE2G2 ubiquitin conjugating enzyme E2 G2 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:2154298|PMID:11278356) MGI
Ensembl
GO_Central
PMID:11278356 GO_REF:0000033 GO_REF:0000107 MGI:2154298 NCBI chr13:207,444,529...207,471,826
Ensembl chr13:207,444,533...207,471,796
JBrowse link
G UBE2J1 ubiquitin conjugating enzyme E2 J1 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:5532755|PMID:24020373)
(PMID:21245296)
MGI
Ensembl
GO_Central
PMID:21245296 PMID:24020373 GO_REF:0000033 GO_REF:0000107 MGI:5532755 NCBI chr 1:57,340,622...57,364,263
Ensembl chr 1:57,337,082...57,364,389
JBrowse link
G UBE2J2 ubiquitin conjugating enzyme E2 J2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,556,134...63,568,080
Ensembl chr 6:63,555,488...63,568,017
JBrowse link
G UBE4A ubiquitination factor E4A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:45,661,090...45,701,911
Ensembl chr 9:45,661,106...45,704,810
JBrowse link
G UBE4B ubiquitination factor E4B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:70,345,789...70,462,434
Ensembl chr 6:70,345,813...70,462,434
JBrowse link
G UBQLN1 ubiquilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:31,275,916...31,317,521
Ensembl chr10:31,275,868...31,317,516
JBrowse link
G UBQLN2 ubiquilin 2 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr  X:48,948,062...48,951,392
Ensembl chr  X:48,948,389...48,950,263
JBrowse link
G UBXN10 UBX domain protein 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:78,455,427...78,464,125
Ensembl chr 6:78,456,983...78,465,771
JBrowse link
G UBXN4 UBX domain protein 4 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr15:16,162,115...16,206,511
Ensembl chr15:16,160,304...16,206,329
JBrowse link
G UBXN6 UBX domain protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,357,522...74,378,600
Ensembl chr 2:74,357,517...74,378,592
JBrowse link
G UBXN8 UBX domain protein 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:54,342,575...54,367,610
Ensembl chr15:54,339,563...54,367,605
JBrowse link
G UFD1 ubiquitin recognition factor in ER associated degradation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:51,113,858...51,132,820
Ensembl chr14:51,113,713...51,133,072
JBrowse link
G UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:59,141,582...59,265,053
Ensembl chr15:59,141,639...59,265,047
JBrowse link
G UMOD uromodulin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5916257|PMID:28437467) MGI
Ensembl
PMID:28437467 GO_REF:0000107 MGI:5916257 NCBI chr 3:25,473,048...25,492,286
Ensembl chr 3:25,473,162...25,492,278
JBrowse link
G USP19 ubiquitin specific peptidase 19 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr13:31,726,668...31,738,135
Ensembl chr13:31,726,672...31,737,981
JBrowse link
G VCP valosin containing protein involved_in ISS
IBA
IEA
UniProt
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,851,206...235,869,634
JBrowse link
G WFS1 wolframin ER transmembrane glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,362,678...4,405,185
Ensembl chr 8:4,362,680...4,385,273
JBrowse link
G YOD1 YOD1 deubiquitinase involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 9:67,672,640...67,681,889
Ensembl chr 9:67,672,651...67,681,826
JBrowse link
G protein-coupled receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BECN2 beclin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5528919|PMID:23954414)
(PMID:23954414)
MGI
Ensembl
PMID:23954414 GO_REF:0000107 MGI:5528919 NCBI chr10:15,388,712...15,390,250
Ensembl chr10:15,388,605...15,390,226
JBrowse link
G GPRASP1 G protein-coupled receptor associated sorting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23954414) MGI
Ensembl
PMID:23954414 GO_REF:0000107 NCBI chr  X:83,765,210...83,810,090
Ensembl chr  X:83,765,303...83,810,085
JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr16:63,550,123...64,010,838
Ensembl chr16:63,550,130...63,603,034
JBrowse link
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chr14:124,400,330...124,401,739
Ensembl chr14:124,400,330...124,401,739
JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
InterPro
PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chr 4:118,186,031...118,269,106
Ensembl chr 4:118,177,377...118,269,101
JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1351534|PMID:10625614) MGI
Ensembl
PMID:10625614 GO_REF:0000107 MGI:1351534 NCBI chr12:19,965,885...19,975,783
Ensembl chr12:19,965,330...19,975,857
JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within
ISO
IEA
IBA
(MGI:2179452|PMID:10838256)
(MGI:2157196|PMID:11785984)
(MGI:2136118|PMID:11328962)
RGD
TreeGrafter
GO_Central
Ensembl
MGI
PMID:2193931 PMID:8710802 PMID:10838256 PMID:11328962 PMID:11785984 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:2136118 MGI:2157196 MGI:2179452 RGD:1599504 RGD:1599506 NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,314,591...2,336,988
JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of ISO (MGI:1339514|PMID:10391216) MGI PMID:10391216 MGI:1339514 NCBI chr11:7,195,556...7,321,071 JBrowse link
G PFKM phosphofructokinase, muscle acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4356361|PMID:19696889) MGI
Ensembl
PMID:19696889 GO_REF:0000107 MGI:4356361 NCBI chr 5:78,475,473...78,525,052
Ensembl chr 5:78,476,123...78,526,997
JBrowse link
G PGM2 phosphoglucomutase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:29,307,628...29,343,012
Ensembl chr 8:29,307,685...29,342,861
JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:17,640,790...17,656,765
Ensembl chr 3:17,639,996...17,656,618
JBrowse link
G PYGB glycogen phosphorylase B involved_in ISO
IBA
IEA
RGD
GO_Central
TreeGrafter
Ensembl
PMID:10634496 PMID:11071367 PMID:16226229 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chr17:30,940,457...30,995,688
Ensembl chr17:30,940,452...30,995,691
JBrowse link
G PYGL glycogen phosphorylase L involved_in ISO
IBA
IEA
RGD
GO_Central
TreeGrafter
Ensembl
PMID:114169 PMID:6449198 PMID:15152027 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chr 1:180,645,849...180,704,124
Ensembl chr 1:180,620,314...180,719,979
JBrowse link
G PYGM glycogen phosphorylase, muscle associated involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:4844074|PMID:17689562)
(MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562)
RGD
TreeGrafter
Ensembl
MGI
PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 More... GO_REF:0000107 GO_REF:0000118 MGI:3052259 MGI:4844074 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chr 2:7,409,330...7,421,256
Ensembl chr 2:7,409,116...7,421,254
JBrowse link
G STBD1 starch binding domain 1 involved_in ISO (PMID:20810658) GO_Central PMID:20810658 NCBI chr 8:71,982,987...71,987,880 JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFKM phosphofructokinase, muscle acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4356361|PMID:19696889) MGI
Ensembl
PMID:19696889 GO_REF:0000107 MGI:4356361 NCBI chr 5:78,475,473...78,525,052
Ensembl chr 5:78,476,123...78,526,997
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:119,948,443...119,965,702
Ensembl chr 2:119,941,997...119,965,696
JBrowse link
G ATG2A autophagy related 2A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:7,261,819...7,282,614
Ensembl chr 2:7,262,031...7,282,347
JBrowse link
G ATG2B autophagy related 2B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:117,506,298...117,586,651
Ensembl chr 7:117,506,302...117,586,545
JBrowse link
G ATG3 autophagy related 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:147,279,110...147,309,597
Ensembl chr13:147,279,437...147,309,590
JBrowse link
G GAA alpha glucosidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,314,591...2,336,988
JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:61,758,127...61,767,427
Ensembl chr 5:61,758,130...61,767,601
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 4:77,593,204...77,649,551
Ensembl chr 4:77,594,324...77,649,548
JBrowse link
G STBD1 starch binding domain 1 involved_in ISO (PMID:20810658)
(MGI:7261139|PMID:20810658)
GO_Central
MGI
PMID:20810658 MGI:7261139 NCBI chr 8:71,982,987...71,987,880 JBrowse link
G WDR45 WD repeat domain 45 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:43,150,691...43,155,981
Ensembl chr  X:43,147,477...43,156,234
JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:11,715,332...11,752,009
Ensembl chr12:11,715,318...11,752,021
JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:3,800,170...3,830,973
Ensembl chr 3:3,800,186...3,834,413
JBrowse link
glycoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 acts_upstream_of_or_within ISO (MGI:3654428|PMID:16431915) MGI PMID:16431915 MGI:3654428 NCBI chr 9:125,908,861...125,983,073
Ensembl chr 9:125,908,864...125,983,029
JBrowse link
G FBXO17 F-box protein 17 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:47,733,064...47,759,646
Ensembl chr 6:47,732,303...47,759,606
JBrowse link
G FBXO2 F-box protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:3573989|PMID:15723043) MGI
TreeGrafter
GO_Central
Ensembl
PMID:15723043 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3573989 NCBI chr 6:71,740,647...71,747,265
Ensembl chr 6:71,740,677...71,748,923
JBrowse link
G FBXO44 F-box protein 44 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:71,747,210...71,754,519
Ensembl chr 6:71,743,261...71,774,223
JBrowse link
G FBXO6 F-box protein 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3573989|PMID:15723043) MGI
TreeGrafter
Ensembl
PMID:15723043 GO_REF:0000107 GO_REF:0000118 MGI:3573989 NCBI chr 6:71,755,335...71,774,264
Ensembl chr 6:71,768,498...71,774,243
JBrowse link
G MANBA mannosidase beta acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(MGI:57603|PMID:3447593) MGI
GO_Central
TreeGrafter
PMID:3447593 GO_REF:0000033 GO_REF:0000118 MGI:57603 NCBI chr 8:118,251,122...118,361,903
Ensembl chr 8:118,251,106...118,361,900
JBrowse link
G NCCRP1 NCCRP1, F-box associated domain containing involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:47,925,879...47,929,961
Ensembl chr 6:47,915,118...47,929,937
JBrowse link
G NEU2 neuraminidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:133,392,559...133,479,406
Ensembl chr15:133,468,293...133,477,110
JBrowse link
G NEU4 neuraminidase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:140,324,087...140,332,226
Ensembl chr15:140,325,135...140,328,276
JBrowse link
G NGLY1 N-glycanase 1 involved_in IEA
IBA
InterPro
TreeGrafter
GO_Central
Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:12,616,564...12,683,637
Ensembl chr13:12,616,567...12,685,823
JBrowse link
G STT3B STT3 oligosaccharyltransferase complex catalytic subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:17,532,341...17,635,039
Ensembl chr13:17,534,171...17,635,035
JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HYAL2 hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,227...32,815,333
JBrowse link
G IDS iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,572,797...121,596,525
Ensembl chr  X:121,572,807...121,596,513
JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (MGI:3697540|PMID:16979922), (MGI:5448924|PMID:22580166)
(MGI:4414887|PMID:19751987)
(MGI:4397742|PMID:19834056)
(MGI:5295514|PMID:21873421)
RGD
MGI
PMID:6138357 PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 More... MGI:3697540 MGI:4397742 MGI:4414887 MGI:5295514 MGI:5448924 RGD:1599427 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969
JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2135409|PMID:11278811) MGI
Ensembl
PMID:11278811 GO_REF:0000107 MGI:2135409 NCBI chr 2:48,937,357...48,954,206
Ensembl chr 2:48,937,419...48,954,196
JBrowse link
G SGSH N-sulfoglucosamine sulfohydrolase involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:2,241,824...2,248,388
Ensembl chr12:2,241,840...2,248,376
JBrowse link
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPC1 glypican 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:139,457,866...139,483,704
Ensembl chr15:139,457,669...139,484,670
JBrowse link
G GUSB glucuronidase beta involved_in ISO (MGI:7281718|PMID:23897660), (MGI:7284274|PMID:11273777) MGI PMID:11273777 PMID:23897660 MGI:7281718 MGI:7284274 NCBI chr 3:16,672,071...16,686,520
Ensembl chr 3:16,671,389...16,689,203
JBrowse link
G HPSE heparanase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:135,082,199...135,120,887
Ensembl chr 8:135,097,725...135,120,887
JBrowse link
G IDS iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,572,797...121,596,525
Ensembl chr  X:121,572,807...121,596,513
JBrowse link
G IDUA alpha-L-iduronidase involved_in ISO (MGI:3605936|PMID:15979918)
(MGI:7310026|PMID:25854773)
MGI PMID:15979918 PMID:25854773 MGI:3605936 MGI:7310026 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969
JBrowse link
G LOC100154844 heparan-alpha-glucosaminide N-acetyltransferase involved_in ISO (MGI:3703408|PMID:16960811) MGI PMID:16960811 MGI:3703408 NCBI chr17:8,644,388...8,665,004 JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,271,351...20,279,777 JBrowse link
G SGSH N-sulfoglucosamine sulfohydrolase involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:2,241,824...2,248,388
Ensembl chr12:2,241,840...2,248,376
JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4397742|PMID:19834056)
(PMID:21873421)
(MGI:5295514|PMID:21873421)
(MGI:4414887|PMID:19751987)
MGI
Ensembl
PMID:19751987 PMID:19834056 PMID:21873421 GO_REF:0000107 MGI:4397742 MGI:4414887 MGI:5295514 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,658...36,759,552
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,613
JBrowse link
G ERI1 exoribonuclease 1 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr15:56,091,790...56,123,520
Ensembl chr15:56,093,581...56,123,510
JBrowse link
G EXOSC10 exosome component 10 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,999...71,282,433
JBrowse link
G EXOSC4 exosome component 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:618,993...621,336
Ensembl chr 4:618,990...621,342
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:48,348,653...48,360,004
Ensembl chr15:48,348,648...48,365,106
JBrowse link
G MTPAP mitochondrial poly(A) polymerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:40,764,098...40,869,608
Ensembl chr10:40,764,396...40,789,061
JBrowse link
G TENT2 terminal nucleotidyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:88,328,250...88,388,242
Ensembl chr 2:88,328,258...88,388,241
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,605,529...34,669,278
JBrowse link
G TUT1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 2:9,148,563...9,161,918
Ensembl chr 2:9,148,560...9,161,905
JBrowse link
G TUT4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,692,797...159,793,758
JBrowse link
G TUT7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr10:28,995,564...29,061,179
Ensembl chr10:28,995,565...29,061,176
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,023...59,013,495
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,063,810...83,174,497
Ensembl chr13:83,065,957...83,174,477
JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD44 CD44 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:25,788,699...25,884,209
Ensembl chr 2:25,788,703...25,884,153
JBrowse link
G CEMIP cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:49,622,534...49,792,547
Ensembl chr 7:49,622,539...49,792,543
JBrowse link
G CEMIP2 cell migration inducing hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:224,960,875...225,042,378
Ensembl chr 1:224,960,875...225,042,308
JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) UniProt PMID:19577615 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916
JBrowse link
G GUSB glucuronidase beta involved_in ISO (MGI:4442520|PMID:20385825) MGI PMID:20385825 MGI:4442520 NCBI chr 3:16,672,071...16,686,520
Ensembl chr 3:16,671,389...16,689,203
JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:60,878,531...60,911,537
Ensembl chr 7:60,878,284...60,913,339
JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759
JBrowse link
G HMMR hyaluronan mediated motility receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:60,290,684...60,332,411
Ensembl chr16:60,290,001...60,331,936
JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISS
IEA
IBA
UniProt
TreeGrafter
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793
JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:32,793,784...32,794,650
Ensembl chr13:32,793,572...32,794,700
JBrowse link
G HYAL2 hyaluronidase 2 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,227...32,815,333
JBrowse link
G HYAL3 hyaluronidase 3 involved_in IEA
IBA
ISS
InterPro
TreeGrafter
GO_Central
Ensembl
UniProt
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:32,790,843...32,796,995
Ensembl chr13:32,790,850...32,796,563
JBrowse link
G HYAL4 hyaluronidase 4 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr18:23,623,379...23,662,528
Ensembl chr18:23,625,399...23,660,792
JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:48,937,357...48,954,206
Ensembl chr 2:48,937,419...48,954,196
JBrowse link
G SPAM1 sperm adhesion molecule 1 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr18:23,589,947...23,598,739
Ensembl chr18:23,589,952...23,598,739
JBrowse link
G STAB2 stabilin 2 involved_in ISO (MGI:5315050|PMID:22371575) MGI PMID:22371575 MGI:5315050 NCBI chr 5:80,692,459...80,863,221 JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046
JBrowse link
insulin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEACAM1 CEA cell adhesion molecule 1 involved_in ISO PMID:11850617
(MGI:3819735|PMID:18544705)
UniProt PMID:11850617 PMID:18544705 MGI:3819735 RGD:734645 NCBI chr 6:49,437,308...49,460,614 JBrowse link
G CELA2A chymotrypsin-like elastase family, member 2A involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:74,691,653...74,707,598
Ensembl chr 6:74,691,653...74,707,598
JBrowse link
G CTSD cathepsin D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,188,548...1,197,642
Ensembl chr 2:1,188,549...1,197,643
JBrowse link
G IDE insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:103,992,035...104,106,571
Ensembl chr14:103,992,039...104,106,576
JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNS glucosamine (N-acetyl)-6-sulfatase ISO RGD PMID:3161730 RGD:1600571 NCBI chr 5:29,128,754...29,190,283
Ensembl chr 5:29,128,760...29,190,230
JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOAH acyloxyacyl hydrolase involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr18:37,416,875...37,599,934
Ensembl chr18:37,416,966...37,599,710
JBrowse link
G ELMO1 engulfment and cell motility 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:36,755,026...37,336,095
Ensembl chr18:36,786,378...37,347,283
JBrowse link
lipoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOB apolipoprotein B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588634|PMID:15863839) MGI
Ensembl
PMID:15863839 GO_REF:0000107 MGI:3588634 NCBI chr 3:117,250,096...117,316,200
Ensembl chr 3:117,250,096...117,316,200
JBrowse link
G APOE apolipoprotein E acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3770508|PMID:17720994) MGI
TreeGrafter
Ensembl
PMID:17720994 GO_REF:0000107 GO_REF:0000118 MGI:3770508 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330
JBrowse link
G ATM ATM serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588634|PMID:15863839) MGI
Ensembl
PMID:15863839 GO_REF:0000107 MGI:3588634 NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,658...36,759,552
JBrowse link
G CTSD cathepsin D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,188,548...1,197,642
Ensembl chr 2:1,188,549...1,197,643
JBrowse link
G LDLR low density lipoprotein receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583861|PMID:15741654)
(MGI:1313233|PMID:9788969), (MGI:3576461|PMID:15805190)
MGI
Ensembl
PMID:9788969 PMID:15741654 PMID:15805190 GO_REF:0000107 MGI:1313233 MGI:3576461 MGI:3583861 NCBI chr 2:69,828,348...69,864,823
Ensembl chr 2:69,828,332...69,864,827
JBrowse link
G LIPA lipase A, lysosomal acid type acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6510385|PMID:33357458) MGI
Ensembl
PMID:33357458 GO_REF:0000107 MGI:6510385 NCBI chr14:101,131,372...101,254,739
Ensembl chr14:101,126,257...101,193,614
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:51,317,386...51,358,665 JBrowse link
lncRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WDR82 WD repeat domain 82 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:34,387,799...34,412,190
Ensembl chr13:34,387,808...34,412,140
JBrowse link
G ZC3H4 zinc finger CCCH-type containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,894,944...52,938,715
Ensembl chr 6:52,894,951...52,938,164
JBrowse link
low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCSK9 proprotein convertase subtilisin/kexin type 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:157,388,370...157,409,620
Ensembl chr 6:157,388,372...157,409,551
JBrowse link
lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 acts_upstream_of_or_within ISO (MGI:6355740|PMID:30930081) MGI PMID:30930081 MGI:6355740 NCBI chr 3:3,622,684...3,642,370
Ensembl chr 3:3,622,699...3,642,412
JBrowse link
G CCDC115 coiled-coil domain containing 115 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:31,974,715...31,979,062
Ensembl chr15:31,974,724...31,979,059
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,433,564...18,450,296
Ensembl chr 3:18,433,836...18,450,290
JBrowse link
G DPP7 dipeptidyl peptidase 7 acts_upstream_of_or_within ISO (MGI:6101836|PMID:28728022) MGI PMID:28728022 MGI:6101836
G GRN granulin precursor acts_upstream_of_or_within ISO (MGI:6101836|PMID:28728022) MGI PMID:28728022 MGI:6101836 NCBI chr12:18,893,772...18,900,444
Ensembl chr12:18,893,770...18,900,446
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:98,586,718...98,623,939
Ensembl chr  X:98,556,710...98,623,940
JBrowse link
G MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of ISO (MGI:5751042|PMID:25592972), (MGI:5816436|PMID:26467158) MGI PMID:25592972 PMID:26467158 MGI:5751042 MGI:5816436 NCBI chr 5:8,777,964...8,807,144
Ensembl chr 5:8,777,965...8,807,100
JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (MGI:2671637|PMID:12813057) MGI PMID:12813057 MGI:2671637 NCBI chr14:74,734,185...74,820,645
Ensembl chr14:74,734,189...74,887,763
JBrowse link
G SLC17A9 solute carrier family 17 member 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:7447186|PMID:24962569) UniProt
Ensembl
PMID:24962569 GO_REF:0000107 MGI:7447186 NCBI chr17:62,186,114...62,200,091
Ensembl chr17:62,186,112...62,200,084
JBrowse link
G TMEM106B transmembrane protein 106B acts_upstream_of_or_within ISO (MGI:6101836|PMID:28728022) MGI PMID:28728022 MGI:6101836 NCBI chr 9:81,837,654...81,864,215
Ensembl chr 9:81,837,667...81,864,210
JBrowse link
G TMEM199 transmembrane protein 199 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,636,379...44,641,536
Ensembl chr12:44,636,379...44,641,527
JBrowse link
G TPP1 tripeptidyl peptidase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6101836|PMID:28728022) MGI
Ensembl
PMID:28728022 GO_REF:0000107 MGI:6101836 NCBI chr 9:3,135,580...3,143,408
Ensembl chr 9:3,135,642...3,143,404
JBrowse link
G VPS13A vacuolar protein sorting 13 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:230,069,339...230,331,343
Ensembl chr 1:230,069,368...230,331,200
JBrowse link
mannoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:61,703,601...61,732,231
Ensembl chr13:61,703,621...61,732,119
JBrowse link
G EDEM2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,483,190...38,515,243
Ensembl chr17:38,480,044...38,515,227
JBrowse link
G EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:125,908,861...125,983,073
Ensembl chr 9:125,908,864...125,983,029
JBrowse link
G LOC110258087 endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase-like involved_in ISO (PMID:10521544)
(PMID:18003979)
ParkinsonsUK-UCL PMID:10521544 PMID:18003979
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HM13 histocompatibility minor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:35,248,575...35,288,431
Ensembl chr17:35,248,570...35,288,539
JBrowse link
G RHBDD1 rhomboid domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:128,346,315...128,499,151
Ensembl chr15:128,346,373...128,469,213
JBrowse link
miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA
IBA
UniProt
TreeGrafter
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,829...132,906,232
JBrowse link
G LIN28A lin-28 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:83,806,178...83,818,550
Ensembl chr 6:83,806,056...83,818,633
JBrowse link
G LIN28B lin-28 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:71,173,291...71,296,131
Ensembl chr 1:71,159,251...71,296,217
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,504
JBrowse link
G SND1 staphylococcal nuclease and tudor domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:20,261,473...20,653,621
Ensembl chr18:20,261,476...20,653,590
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:25049417) UniProt PMID:25049417 NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,605,529...34,669,278
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,692,797...159,793,758
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,193
JBrowse link
miRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 6:92,038,104...92,076,477
Ensembl chr 6:91,984,303...92,215,149
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chr 4:2,966,794...3,012,388
Ensembl chr 4:2,919,511...3,015,334
JBrowse link
G AGO4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 6:91,967,499...92,013,030
Ensembl chr 6:91,973,119...92,012,990
JBrowse link
G MIR1 microRNA mir-1 involved_in ISO (PMID:23499676), (PMID:25802280) BHF-UCL PMID:23499676 PMID:25802280 NCBI chr17:61,894,036...61,894,143
Ensembl chr17:61,894,036...61,894,143
JBrowse link
G MIR100 microRNA mir-100 involved_in ISO (PMID:22684006) BHF-UCL PMID:22684006 NCBI chr 9:49,157,909...49,157,988
Ensembl chr 9:49,157,909...49,157,988
JBrowse link
G MIR125A microRNA mir-125a involved_in ISO (PMID:30670152) ARUK-UCL PMID:30670152 NCBI chr 6:58,331,566...58,331,645
Ensembl chr 6:58,331,566...58,331,645
JBrowse link
G MIR125B-1 microRNA mir-125b-1 involved_in ISO (PMID:28214897) BHF-UCL PMID:28214897 NCBI chr 9:49,109,435...49,109,514
Ensembl chr 9:49,109,435...49,109,514
JBrowse link
G MIR128-1 microRNA mir-128-1 involved_in ISO (PMID:33058756) BHF-UCL PMID:33058756 NCBI chr15:16,273,557...16,273,638
Ensembl chr15:16,273,551...16,273,659
JBrowse link
G MIR128-2 microRNA mir-128-2 involved_in ISO (PMID:33058756) BHF-UCL PMID:33058756 NCBI chr13:21,038,445...21,038,524
Ensembl chr13:21,038,442...21,038,525
JBrowse link
G MIR130A microRNA mir-130a involved_in ISO (PMID:30741461) BHF-UCL PMID:30741461 NCBI chr 2:13,296,695...13,296,773
Ensembl chr 2:13,296,695...13,296,773
JBrowse link
G MIR133A-1 microRNA mir-133a-1 involved_in ISO (PMID:32205184) ARUK-UCL PMID:32205184 NCBI chr17:61,904,781...61,904,883
Ensembl chr17:61,904,781...61,904,883
JBrowse link
G MIR133A-2 microRNA mir-133a-2 involved_in ISO (PMID:32205184) ARUK-UCL PMID:32205184 NCBI chr 6:106,998,899...106,998,971
Ensembl chr 6:106,998,896...106,998,982
JBrowse link
G MIR137 microRNA mir-137 involved_in ISO (PMID:23275153) BHF-UCL PMID:23275153 NCBI chr 4:119,793,993...119,794,074
Ensembl chr 4:119,793,984...119,794,088
JBrowse link
G MIR140 microRNA mir-140 involved_in ISO (PMID:24928442) BHF-UCL PMID:24928442 NCBI chr 6:17,077,530...17,077,599
Ensembl chr 6:17,077,507...17,077,620
JBrowse link
G MIR142 microRNA mir-142 involved_in ISO (PMID:24558198), (PMID:26572508), (PMID:31168355) BHF-UCL PMID:24558198 PMID:26572508 PMID:31168355 NCBI chr12:34,609,378...34,609,457
Ensembl chr12:34,609,364...34,609,468
JBrowse link
G MIR145 microRNA mir-145 involved_in ISO (PMID:25323858), (PMID:29883722)
(PMID:25704091)
BHF-UCL PMID:25323858 PMID:25704091 PMID:29883722 NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211
JBrowse link
G MIR151 microRNA mir-151 involved_in ISO (PMID:20305651) BHF-UCL PMID:20305651 NCBI chr 4:2,849,041...2,849,120
Ensembl chr 4:2,849,038...2,849,130
JBrowse link
G MIR16-1 microRNA mir-16-1 involved_in ISO (PMID:24418124) ARUK-UCL PMID:24418124 NCBI chr13:100,083,329...100,083,405
Ensembl chr13:100,083,329...100,083,405
JBrowse link
G MIR16-2 microRNA mir-16-2 involved_in ISO (PMID:24418124) ARUK-UCL PMID:24418124 NCBI chr11:17,757,606...17,757,684
Ensembl chr11:17,757,601...17,757,687
JBrowse link
G MIR181A-1 microRNA mir-181a-1 involved_in ISO (PMID:22714950)
(PMID:25535255)
BHF-UCL
ARUK-UCL
PMID:22714950 PMID:25535255 NCBI chr10:21,696,653...21,696,756
Ensembl chr10:21,696,653...21,696,756
JBrowse link
G MIR181A-2 microRNA mir-181a-2 involved_in ISO (PMID:22714950)
(PMID:25535255)
BHF-UCL
ARUK-UCL
PMID:22714950 PMID:25535255 NCBI chr 1:265,497,249...265,497,328
Ensembl chr 1:265,497,249...265,497,328
JBrowse link
G MIR181B-1 microRNA mir-181b-1 involved_in ISO (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr10:21,696,492...21,696,571
Ensembl chr10:21,696,492...21,696,571
JBrowse link
G MIR181B-2 microRNA mir-181b-2 involved_in ISO (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr 1:265,499,111...265,499,196
Ensembl chr 1:265,499,108...265,499,196
JBrowse link
G MIR181C microRNA mir-181c involved_in ISO (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr 2:65,279,950...65,280,036
Ensembl chr 2:65,279,944...65,280,040
JBrowse link
G MIR185 microRNA mir-185 involved_in ISO (PMID:23459944), (PMID:23951060), (PMID:26316588), (PMID:29053187) BHF-UCL PMID:23459944 PMID:23951060 PMID:26316588 PMID:29053187 NCBI chr14:51,449,903...51,449,978
Ensembl chr14:51,449,903...51,449,978
JBrowse link
G MIR18A microRNA mir-18a involved_in ISO (PMID:28131417), (PMID:29988076), (PMID:34937502) ARUK-UCL PMID:28131417 PMID:29988076 PMID:34937502 NCBI chr11:60,734,791...60,734,882
Ensembl chr11:60,734,791...60,734,882
JBrowse link
G MIR190B microRNA mir-190b involved_in ISO (PMID:32039833) BHF-UCL PMID:32039833 NCBI chr 4:95,540,606...95,540,688
Ensembl chr 4:95,540,606...95,540,688
JBrowse link
G MIR191 microRNA mir-191 involved_in ISO (PMID:31874245) BHF-UCL PMID:31874245 NCBI chr13:31,655,484...31,655,563
Ensembl chr13:31,655,484...31,655,563
JBrowse link
G MIR192 microRNA mir-192 involved_in ISO (PMID:28483554) BHF-UCL PMID:28483554 NCBI chr 2:7,285,667...7,285,746
Ensembl chr 2:7,285,667...7,285,746
JBrowse link
G MIR193A microRNA mir-193a involved_in ISO (PMID:29725386) BHF-UCL PMID:29725386 NCBI chr12:43,336,969...43,337,048
Ensembl chr12:43,336,969...43,337,048
JBrowse link
G MIR195 microRNA mir-195 involved_in ISO (PMID:31921616) BHF-UCL PMID:31921616 NCBI chr12:52,422,039...52,422,118
Ensembl chr12:52,422,039...52,422,118
JBrowse link
G MIR196A-1 microRNA mir-196a-1 acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) MGI PMID:15105502 PMID:15361871 MGI:3042528 MGI:3510301 NCBI chr12:24,886,316...24,886,395
Ensembl chr12:24,886,307...24,886,408
JBrowse link
G MIR196A-2 microRNA mir-196a-2 acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) MGI PMID:15105502 PMID:15361871 MGI:3042528 MGI:3510301 NCBI chr 5:19,204,442...19,204,548
Ensembl chr 5:19,204,442...19,204,548
JBrowse link
G MIR199B microRNA mir-199b involved_in ISO (PMID:32082362) BHF-UCL PMID:32082362 NCBI chr 1:268,691,520...268,691,593
Ensembl chr 1:268,691,502...268,691,610
JBrowse link
G MIR19A microRNA mir-19a involved_in ISO (PMID:27098600), (PMID:29130787) BHF-UCL PMID:27098600 PMID:29130787 NCBI chr11:60,734,939...60,735,020
Ensembl chr11:60,734,939...60,735,020
JBrowse link
G MIR19B-1 microRNA mir-19b-1 involved_in ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr11:60,735,238...60,735,317
Ensembl chr11:60,735,230...60,735,328
JBrowse link
G MIR19B-2 microRNA mir-19b-2 involved_in ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr  X:110,113,855...110,113,934
Ensembl chr  X:110,113,855...110,113,934
JBrowse link
G MIR204 microRNA mir-204 involved_in ISO (PMID:20056717) BHF-UCL PMID:20056717 NCBI chr 1:224,065,494...224,065,602
Ensembl chr 1:224,065,494...224,065,602
JBrowse link
G MIR206 microRNA mir-206 involved_in ISO (PMID:23499676) BHF-UCL PMID:23499676 NCBI chr 7:45,976,293...45,976,372
Ensembl chr 7:45,976,293...45,976,372
JBrowse link
G MIR20A microRNA mir-20a involved_in ISO (PMID:29653364), (PMID:31368162) ARUK-UCL PMID:29653364 PMID:31368162 NCBI chr11:60,735,109...60,735,179
Ensembl chr11:60,735,099...60,735,196
JBrowse link
G MIR20B-1 microRNA mir-20b-1 involved_in ISO (PMID:32336590) BHF-UCL PMID:32336590 NCBI chr  X:110,113,980...110,114,059
Ensembl chr  X:110,113,980...110,114,059
JBrowse link
G MIR212 microRNA mir-212 involved_in ISO (PMID:26693054) BHF-UCL PMID:26693054 NCBI chr12:48,163,054...48,163,135
Ensembl chr12:48,163,046...48,163,145
JBrowse link
G MIR214 microRNA mir-214 involved_in ISO (PMID:30703347) BHF-UCL PMID:30703347 NCBI chr 9:114,527,992...114,528,101
Ensembl chr 9:114,527,990...114,528,101
JBrowse link
G MIR23A microRNA mir-23a involved_in ISO (PMID:26400397) BHF-UCL PMID:26400397 NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186
JBrowse link
G MIR27A microRNA mir-27a involved_in ISO (PMID:25915942), (PMID:26400397) BHF-UCL PMID:25915942 PMID:26400397 NCBI chr 2:65,308,294...65,308,375
Ensembl chr 2:65,308,294...65,308,375
JBrowse link
G MIR27B microRNA mir-27b involved_in ISO (PMID:30729664) BHF-UCL PMID:30729664 NCBI chr10:27,079,963...27,080,042
Ensembl chr10:27,079,954...27,080,056
JBrowse link
G MIR29B-1 microRNA mir-29b-1 involved_in ISO (PMID:26175849) BHF-UCL PMID:26175849 NCBI chr18:18,039,629...18,039,709
Ensembl chr18:18,039,629...18,039,709
JBrowse link
G MIR29B-2 microRNA mir-29b-2 involved_in ISO (PMID:26175849) BHF-UCL PMID:26175849 NCBI chr 9:135,019,079...135,019,162
Ensembl chr 9:135,019,075...135,019,164
JBrowse link
G MIR30B microRNA mir-30b involved_in ISO (PMID:23968872) BHF-UCL PMID:23968872 NCBI chr 4:6,952,794...6,952,869
Ensembl chr 4:6,952,794...6,952,869
JBrowse link
G MIR326 microRNA mir-326 involved_in ISO (PMID:24279830) BHF-UCL PMID:24279830 NCBI chr 9:9,581,944...9,582,034
Ensembl chr 9:9,581,944...9,582,034
JBrowse link
G MIR342 microRNA mir-342 involved_in ISO (PMID:23951060) BHF-UCL PMID:23951060 NCBI chr 7:121,021,761...121,021,840
Ensembl chr 7:121,021,761...121,021,840
JBrowse link
G MIR365-1 microRNA mir-365-1 involved_in ISO (PMID:30910589) ARUK-UCL PMID:30910589 NCBI chr 3:28,908,137...28,908,216
Ensembl chr 3:28,908,129...28,908,219
JBrowse link
G MIR365-2 microRNA mir-365-2 involved_in ISO (PMID:30910589) ARUK-UCL PMID:30910589 NCBI chr12:43,324,725...43,324,804
Ensembl chr12:43,324,728...43,324,809
JBrowse link
G MIR423 microRNA mir-423 involved_in ISO (PMID:32264887) BHF-UCL PMID:32264887 NCBI chr12:46,211,525...46,211,604
Ensembl chr12:46,211,525...46,211,611
JBrowse link
G MIR491 microRNA mir-491 involved_in ISO (PMID:25196641) BHF-UCL PMID:25196641 NCBI chr 1:202,227,251...202,227,326
Ensembl chr 1:202,227,236...202,227,336
JBrowse link
G MIR497 microRNA mir-497 involved_in ISO (PMID:29969696) BHF-UCL PMID:29969696 NCBI chr12:52,422,329...52,422,408
Ensembl chr12:52,422,330...52,422,411
JBrowse link
G MIR708 microRNA mir-708 involved_in ISO (PMID:26932538) BHF-UCL PMID:26932538 NCBI chr 9:13,780,171...13,780,250
Ensembl chr 9:13,780,171...13,780,250
JBrowse link
G MIR885 microRNA mir-885 involved_in ISO (PMID:24882581) BHF-UCL PMID:24882581 NCBI chr13:66,597,531...66,597,610
Ensembl chr13:66,597,531...66,597,610
JBrowse link
G MIR9-1 microRNA mir-9-1 involved_in ISO (PMID:29584810)
(PMID:26315535)
BHF-UCL PMID:26315535 PMID:29584810 NCBI chr 4:93,660,422...93,660,510 JBrowse link
G MIR9-2 microRNA mir-9-2 involved_in ISO (PMID:29584810)
(PMID:26315535)
BHF-UCL PMID:26315535 PMID:29584810 NCBI chr 2:96,076,352...96,076,438 JBrowse link
G MIR9-3 microRNA mir-9-3 involved_in ISO (PMID:29584810)
(PMID:26315535)
BHF-UCL PMID:26315535 PMID:29584810 NCBI chr 7:54,948,452...54,948,532
Ensembl chr 7:54,948,447...54,948,536
JBrowse link
G MIR96 microRNA mir-96 involved_in ISO (PMID:23459944) BHF-UCL PMID:23459944 NCBI chr18:18,982,506...18,982,590
Ensembl chr18:18,982,506...18,982,590
JBrowse link
G MIR98 microRNA mir-98 involved_in ISO (PMID:27860183), (PMID:30195495)
(PMID:28251559)
BHF-UCL PMID:27860183 PMID:28251559 PMID:30195495 NCBI chr  X:46,302,381...46,302,460
Ensembl chr  X:46,302,381...46,302,460
JBrowse link
G MIRLET7A-1 microRNA let-7a-1 involved_in ISO (PMID:17671087)
(PMID:30467960)
BHF-UCL PMID:17671087 PMID:30467960 NCBI chr 9:49,152,586...49,152,665
Ensembl chr 9:49,152,586...49,152,665
JBrowse link
G MIRLET7A-2 microRNA let-7a-2 involved_in ISO (PMID:17671087)
(PMID:30467960)
BHF-UCL PMID:17671087 PMID:30467960 NCBI chr 3:43,465,667...43,465,758
Ensembl chr 3:43,465,667...43,465,758
JBrowse link
G MIRLET7C microRNA let-7c involved_in ISO (PMID:19841744) BHF-UCL PMID:19841744 NCBI chr13:181,303,209...181,303,302
Ensembl chr13:181,303,209...181,303,302
JBrowse link
G MIRLET7E microRNA let-7e involved_in ISO (PMID:30670152) ARUK-UCL PMID:30670152 NCBI chr 6:58,332,042...58,332,121
Ensembl chr 6:58,332,036...58,332,120
JBrowse link
G MOV10 Mov10 RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:107,738,089...107,763,873
Ensembl chr 4:107,738,092...107,763,602
JBrowse link
mitochondrial DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENDOG endonuclease G involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:269,153,955...269,157,789
Ensembl chr 1:269,154,090...269,157,788
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,395,517...39,402,653
Ensembl chr13:39,395,541...39,402,650
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,273,688
JBrowse link
mitochondrial mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,273,688
JBrowse link
mitochondrial ncRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,273,688
JBrowse link
mitochondrial protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFG1L AFG1 like ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:74,367,421...74,590,766
Ensembl chr 1:74,367,617...74,591,853
JBrowse link
G BNIP3 BCL2 interacting protein 3 involved_in ISO (PMID:22292033) UniProt PMID:22292033 NCBI chr14:140,362,123...140,371,951
Ensembl chr14:140,362,127...140,371,907
JBrowse link
G BNIP3L BCL2 interacting protein 3 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:10,318,688...10,345,689
Ensembl chr14:10,318,732...10,345,679
JBrowse link
G PISD phosphatidylserine decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:48,303,459...48,341,820
Ensembl chr14:48,303,458...48,312,393
JBrowse link
G SPATA18 spermatogenesis associated 18 involved_in IEA
IBA
ISS
InterPro
GO_Central
TreeGrafter
UniProt
Ensembl
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:39,163,001...39,206,217
Ensembl chr 8:39,163,088...39,203,956
JBrowse link
G YME1L1 YME1 like 1 ATPase involved_in ISO (PMID:27495975), (PMID:27786171) UniProt PMID:27495975 PMID:27786171 NCBI chr10:48,807,654...48,855,228 JBrowse link
mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRPPRC leucine rich pentatricopeptide repeat containing acts_upstream_of
involved_in
ISO
IEA
(MGI:5438202|PMID:22045337)
(MGI:5301479|PMID:21880015)
MGI
Ensembl
PMID:21880015 PMID:22045337 GO_REF:0000107 MGI:5301479 MGI:5438202 NCBI chr 3:96,474,510...96,590,706
Ensembl chr 3:96,474,549...96,595,143
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
mitochondrial RNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,273,688
JBrowse link
modification-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISG15 ISG15 ubiquitin like modifier acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(MGI:3511369|PMID:15485925) MGI
GO_Central
Ensembl
PMID:15485925 GO_REF:0000033 GO_REF:0000107 MGI:3511369 NCBI chr 6:63,363,201...63,364,211
Ensembl chr 6:63,363,173...63,364,208
JBrowse link
G LOC100627076 ubiquitin-like protein FUBI pseudogene involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:21,922,050...21,923,151 JBrowse link
G LOC110261249 ubiquitin-like protein FUBI involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:169,121,757...169,122,754
Ensembl chr 2:7,070,906...7,072,809
JBrowse link
G NEDD8 NEDD8 ubiquitin like modifier involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:75,069,947...75,085,905
Ensembl chr 7:75,070,161...75,085,899
JBrowse link
G RPS27A ribosomal protein S27a involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:85,989,609...85,992,257
Ensembl chr 3:85,986,501...85,992,503
JBrowse link
G UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:59,238,802...59,241,512
Ensembl chr 2:59,238,906...59,240,274
JBrowse link
G UBA7 ubiquitin like modifier activating enzyme 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3511369|PMID:15485925) MGI
Ensembl
PMID:15485925 GO_REF:0000107 MGI:3511369 NCBI chr13:32,330,536...32,341,300
Ensembl chr13:32,332,367...32,341,217
JBrowse link
G UBB ubiquitin B involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr12:59,171,258...59,172,841
Ensembl chr12:59,171,289...59,172,841
JBrowse link
G UBC ubiquitin C involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr14:28,253,857...28,260,771
Ensembl chr14:28,257,027...28,263,044
JBrowse link
G UBE2L6 ubiquitin conjugating enzyme E2 L6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3511369|PMID:15485925) MGI
Ensembl
PMID:15485925 GO_REF:0000107 MGI:3511369 NCBI chr 2:13,354,088...13,368,446
Ensembl chr 2:13,354,014...13,370,792
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO4 argonaute RISC component 4 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chr 6:91,967,499...92,013,030
Ensembl chr 6:91,973,119...92,012,990
JBrowse link
G CNOT10 CCR4-NOT transcription complex subunit 10 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr13:18,649,725...18,736,075
Ensembl chr13:18,649,746...18,736,068
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IEA UniProt GO_REF:0000117 NCBI chr16:68,329,785...68,352,020
Ensembl chr16:68,329,790...68,350,260
JBrowse link
G CNOT9 CCR4-NOT transcription complex subunit 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:120,590,354...120,622,203
Ensembl chr15:120,590,641...120,623,898
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,613
JBrowse link
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,829...132,906,232
JBrowse link
G DXO decapping exoribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,057,670...24,060,108
Ensembl chr 7:24,056,525...24,059,997
JBrowse link
G KHSRP KH-type splicing regulatory protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5439239|PMID:22844247) MGI
Ensembl
PMID:22844247 GO_REF:0000107 MGI:5439239 NCBI chr 2:72,656,951...72,668,854
Ensembl chr 2:72,656,752...72,668,964
JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12515382) MGI
Ensembl
PMID:12515382 GO_REF:0000107 NCBI chr 7:23,900,385...23,908,523
Ensembl chr 7:23,900,395...23,908,490
JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12515382) MGI
Ensembl
PMID:12515382 GO_REF:0000107 NCBI chr18:40,752,390...40,755,909
Ensembl chr18:40,752,461...40,755,906
JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr 8:82,409,170...82,428,501
Ensembl chr 8:82,409,174...82,428,426
JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:105,019,539...105,053,603
Ensembl chr 8:105,015,420...105,053,563
JBrowse link
G METTL16 methyltransferase 16, RNA N6-adenosine involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,536
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:28637692 PMID:28792938 PMID:28965759 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,934
JBrowse link
G MIR144 microRNA mir-144 involved_in ISO (MGI:6442632|PMID:30971389) MGI PMID:30971389 MGI:6442632 NCBI chr12:45,088,958...45,089,033
Ensembl chr12:45,088,959...45,089,035
JBrowse link
G MIR451 microRNA mir-451 involved_in ISO (MGI:6442632|PMID:30971389) MGI PMID:30971389 MGI:6442632 NCBI chr12:45,088,808...45,088,872
Ensembl chr12:45,088,808...45,088,872
JBrowse link
G MIRLET7C microRNA let-7c acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr13:181,303,209...181,303,302
Ensembl chr13:181,303,209...181,303,302
JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,218,889...52,219,834
Ensembl chr 6:52,219,418...52,219,834
JBrowse link
G NUDT12 nudix hydrolase 12 involved_in ISO (MGI:6368680|PMID:31101919) UniProt PMID:31101919 MGI:6368680 NCBI chr 2:109,044,946...109,059,721
Ensembl chr 2:109,045,592...109,059,616
JBrowse link
G NUDT16 nudix hydrolase 16 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr13:1,125,180...1,128,036
Ensembl chr13:1,125,183...1,128,041
JBrowse link
G NUDT16L1 nudix hydrolase 16 like 1 NOT|involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:37,684,206...37,694,653
Ensembl chr 3:37,684,207...37,693,652
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,504
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:38,656,270...38,665,863
Ensembl chr 4:38,656,319...38,670,987
JBrowse link
G SLFN14 schlafen family member 14 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:39,947,791...39,962,823
Ensembl chr12:39,950,505...39,961,513
JBrowse link
G SND1 staphylococcal nuclease and tudor domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:20,261,473...20,653,621
Ensembl chr18:20,261,476...20,653,590
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,692,797...159,793,758
JBrowse link
G TUT7 terminal uridylyl transferase 7 involved_in IEA UniProt GO_REF:0000117 NCBI chr10:28,995,564...29,061,179
Ensembl chr10:28,995,565...29,061,176
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein F2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:85,717,147...85,756,750
Ensembl chr 6:85,716,983...85,726,473
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,193
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D acts_upstream_of_or_within ISO (MGI:5567042|PMID:24415781) MGI PMID:24415781 MGI:5567042 NCBI chr 1:16,463,532...16,498,974
Ensembl chr 1:16,465,252...16,498,971
JBrowse link
G ZFP36 ZFP36 ring finger protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10751406), (PMID:11782475) MGI
Ensembl
PMID:10751406 PMID:11782475 GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 acts_upstream_of_or_within ISO PMID:10751406 MGI PMID:10751406 RGD:1580602 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,017...92,495,554
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,407...97,204,698
JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:49288|PMID:1370712) MGI
Ensembl
PMID:1370712 GO_REF:0000107 MGI:49288 NCBI chr 4:16,374,900...16,553,859
Ensembl chr 4:16,374,902...16,553,002
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH5 alkB homolog 5, RNA demethylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:60,507,662...60,530,239
Ensembl chr12:60,507,667...60,529,733
JBrowse link
G CELF1 CUGBP Elav-like family member 1 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr 2:15,066,518...15,161,478
Ensembl chr 2:15,066,510...15,154,386
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828348|PMID:17452450) MGI
Ensembl
PMID:17452450 GO_REF:0000107 MGI:3828348 NCBI chr 8:73,191,721...73,335,779
Ensembl chr 8:73,185,999...73,335,741
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 ISO RGD PMID:26682942 RGD:329961560 NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,096...71,248,906
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,718
JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:118,839,314...118,899,804
Ensembl chr13:118,839,338...118,900,136
JBrowse link
G FXR2 FMR1 autosomal homolog 2 involved_in ISO (MGI:5141571|PMID:21658585) UniProt PMID:21658585 MGI:5141571 NCBI chr12:52,885,932...52,903,257
Ensembl chr12:52,882,870...52,903,450
JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:133,180,638...133,313,307
Ensembl chr15:133,260,113...133,311,887
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 6:81,203,067...81,239,823
Ensembl chr 6:81,196,062...81,239,406
JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chr 8:105,019,539...105,053,603
Ensembl chr 8:105,015,420...105,053,563
JBrowse link
G METTL16 methyltransferase 16, RNA N6-adenosine involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,536
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 More... MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,934
JBrowse link
G MIR144 microRNA mir-144 involved_in ISO (MGI:6442632|PMID:30971389) MGI PMID:30971389 MGI:6442632 NCBI chr12:45,088,958...45,089,033
Ensembl chr12:45,088,959...45,089,035
JBrowse link
G MIR451 microRNA mir-451 involved_in ISO (MGI:6442632|PMID:30971389) MGI PMID:30971389 MGI:6442632 NCBI chr12:45,088,808...45,088,872
Ensembl chr12:45,088,808...45,088,872
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:87,546,388...87,687,483
Ensembl chr 6:87,547,320...87,687,442
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:38,656,270...38,665,863
Ensembl chr 4:38,656,319...38,670,987
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,989...106,314,944
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,352,920...125,493,362
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,692,797...159,793,758
JBrowse link
G TUT7 terminal uridylyl transferase 7 involved_in IEA UniProt GO_REF:0000117 NCBI chr10:28,995,564...29,061,179
Ensembl chr10:28,995,565...29,061,176
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:62,329,302...62,341,312
Ensembl chr17:62,329,302...62,341,413
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein F2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:85,717,147...85,756,750
Ensembl chr 6:85,716,983...85,726,473
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein F3 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:70,887,101...70,928,839
Ensembl chr 4:70,887,105...70,928,807
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3057047|PMID:15480992) MGI
Ensembl
PMID:15480992 GO_REF:0000107 MGI:3057047 NCBI chr 5:62,811,819...62,820,532
Ensembl chr 5:62,810,879...62,820,173
JBrowse link
G AXIN2 axin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,311,293...12,343,207
Ensembl chr12:12,311,298...12,343,200
JBrowse link
G CIRBP cold inducible RNA binding protein involved_in ISO (PMID:11574538) UniProt PMID:11574538 NCBI chr 2:77,185,295...77,194,373
Ensembl chr 2:77,189,846...77,195,569
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,365,802...116,411,224
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:142,384,526...142,387,407
Ensembl chr 2:142,384,532...142,387,199
JBrowse link
G E2F1 E2F transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,178,587...37,190,118
Ensembl chr17:37,178,599...37,189,883
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:48,156,835...48,204,701
Ensembl chr14:48,156,727...48,204,926
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615)
(PMID:21613615)
MGI
Ensembl
PMID:14976220 PMID:21613615 GO_REF:0000107 MGI:3037407 MGI:5287957 NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,096...71,248,906
JBrowse link
G FUS FUS RNA binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:27378374) MGI
Ensembl
PMID:27378374 GO_REF:0000107 NCBI chr 3:17,314,936...17,326,663
Ensembl chr 3:17,314,332...17,326,637
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,604...22,966,536
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030
JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:67,123,055...67,147,991
Ensembl chr 9:67,123,265...67,147,989
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr16:68,390,879...68,451,605
Ensembl chr16:68,390,880...68,484,918
JBrowse link
G LARP1B La ribonucleoprotein 1B involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:96,751,295...96,856,069
Ensembl chr 8:96,751,303...96,856,006
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2158083|PMID:11741878) MGI
Ensembl
PMID:11741878 GO_REF:0000107 MGI:2158083 NCBI chr 9:67,314,651...67,365,060
Ensembl chr 9:67,314,484...67,365,059
JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:18,652,582...18,663,227
Ensembl chr12:18,651,511...18,671,987
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,420...87,909,241
JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:112,039,949...112,090,632
Ensembl chr 7:112,038,234...112,090,510
JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO (MGI:7539456|PMID:32732889)
(PMID:32732889)
RGD
UniProt
PMID:16855020 PMID:32732889 MGI:7539456 RGD:10045995 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,514...4,883,392
JBrowse link
G RBM10 RNA binding motif protein 10 ISO RGD PMID:19508861 RGD:151667451 NCBI chr  X:41,773,232...41,803,656
Ensembl chr  X:41,773,232...41,803,653
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G RBM46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (MGI:5644240|PMID:25397698) MGI PMID:25397698 MGI:5644240 NCBI chr 8:74,337,324...74,383,044
Ensembl chr 8:74,337,319...74,382,515
JBrowse link
G SLC11A1 solute carrier family 11 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:85148|PMID:9009318) MGI
Ensembl
PMID:9009318 GO_REF:0000107 MGI:85148 NCBI chr15:120,434,100...120,446,396
Ensembl chr15:120,433,952...120,446,396
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr12:34,278,363...34,282,164
Ensembl chr12:34,272,956...34,282,162
JBrowse link
G TAF15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:27378374) MGI
Ensembl
PMID:27378374 GO_REF:0000107 NCBI chr12:39,687,171...39,716,761
Ensembl chr12:39,686,884...39,724,769
JBrowse link
G TENT5A terminal nucleotidyltransferase 5A involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:84,545,033...84,552,138
Ensembl chr 1:84,545,202...84,552,134
JBrowse link
G TENT5B terminal nucleotidyltransferase 5B involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:84,303,495...84,310,957
Ensembl chr 6:84,304,395...84,310,733
JBrowse link
G TENT5C terminal nucleotidyltransferase 5C involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 4:103,131,819...103,154,074
Ensembl chr 4:103,131,830...103,154,070
JBrowse link
G TENT5D terminal nucleotidyltransferase 5D involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr  X:64,120,229...64,122,912
Ensembl chr  X:64,120,248...64,121,420
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:92,350,021...92,412,335
Ensembl chr 6:92,355,667...92,412,330
JBrowse link
G TRAF2 TNF receptor associated factor 2 involved_in IEA Ensembl GO_REF:0000107
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:77,483,997...77,541,557
Ensembl chr 1:77,487,577...77,541,198
JBrowse link
G TRAF5 TNF receptor associated factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:131,772,810...131,822,555
Ensembl chr 9:131,775,470...131,822,529
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:13,611,786...13,620,250
Ensembl chr 1:13,611,311...13,620,269
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:31358969) UniProt PMID:31358969 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,774...168,736,604
JBrowse link
G YBX2 Y-box binding protein 2 acts_upstream_of_or_within ISO (MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:3696301 NCBI chr12:52,635,383...52,642,443
Ensembl chr12:52,635,385...52,641,651
JBrowse link
G ZAR1 zygote arrest 1 involved_in ISO (MGI:7367293|PMID:36264786) UniProt PMID:36264786 MGI:7367293 NCBI chr 8:38,386,520...38,391,618
Ensembl chr 8:38,386,643...38,391,611
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL16 methyltransferase 16, RNA N6-adenosine involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,536
JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,514...4,883,392
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2182584|PMID:10601318), (MGI:3029597|PMID:14663139)
(PMID:15572351)
MGI
Ensembl
PMID:10601318 PMID:14663139 PMID:15572351 GO_REF:0000107 MGI:2182584 MGI:3029597 NCBI chr 6:70,725,403...70,736,264
Ensembl chr 6:70,724,590...70,736,236
JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:65,310,868...65,323,816
Ensembl chr 6:65,310,864...65,323,806
JBrowse link
G LOC100513346 mitochondrial import inner membrane translocase subunit TIM16 ISO RGD PMID:24069394 RGD:13462066 NCBI chr 3:37,928,098...38,005,619
Ensembl chr 3:37,928,096...37,985,151
JBrowse link
G NMNAT1 nicotinamide nucleotide adenylyltransferase 1 ISO RGD PMID:27184051 RGD:13781945 NCBI chr 6:70,271,296...70,307,403
Ensembl chr 6:70,272,014...70,310,707
JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSA cathepsin A involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,082,480...48,089,971
Ensembl chr17:48,082,448...48,089,971
JBrowse link
G SNCA synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:129,247,724...129,388,307
Ensembl chr 8:129,248,819...129,271,128
JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:48,156,835...48,204,701
Ensembl chr14:48,156,727...48,204,926
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RGN regucalcin ISO RGD PMID:2001740 RGD:9590215 NCBI chr  X:41,725,660...41,749,736
Ensembl chr  X:41,726,526...41,749,381
JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CST3 cystatin C involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,471,056...30,474,486
Ensembl chr17:30,470,855...30,474,590
JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP11 aquaporin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:12,065,550...12,076,339
Ensembl chr 9:12,065,546...12,078,401
JBrowse link
G SGTA small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,879,081...75,896,279
Ensembl chr 2:75,879,058...75,896,277
JBrowse link
G SVIP small VCP interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:36,703,757...36,714,018
Ensembl chr 2:36,703,790...36,714,934
JBrowse link
G UBXN1 UBX domain protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,072,549...9,075,595
Ensembl chr 2:9,072,968...9,075,594
JBrowse link
G UBXN2A UBX domain protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:114,667,278...114,714,185
Ensembl chr 3:114,673,035...114,714,178
JBrowse link
G USP14 ubiquitin specific peptidase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,087,921...106,139,717
Ensembl chr 6:106,087,924...106,139,379
JBrowse link
G USP25 ubiquitin specific peptidase 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:180,571,019...180,708,966
Ensembl chr13:180,571,342...180,712,435
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr16:63,550,123...64,010,838
Ensembl chr16:63,550,130...63,603,034
JBrowse link
G INS insulin involved_in ISO (PMID:381941) BHF-UCL PMID:381941 NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841
JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,588,721...111,635,064
Ensembl chr 1:111,588,306...111,635,059
JBrowse link
G FURIN furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:53,455,634...53,472,791
Ensembl chr 7:53,460,017...53,472,787
JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAPTM4B lysosomal protein transmembrane 4 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:38,932,735...39,015,219
Ensembl chr 4:38,932,742...39,023,925
JBrowse link
G MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO (MGI:5751042|PMID:25592972), (MGI:5816436|PMID:26467158) MGI PMID:25592972 PMID:26467158 MGI:5751042 MGI:5816436 NCBI chr 5:8,777,964...8,807,144
Ensembl chr 5:8,777,965...8,807,100
JBrowse link
G USP8 ubiquitin specific peptidase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:121,306,031...121,376,154
Ensembl chr 1:121,306,032...121,413,223
JBrowse link
G VPS35 VPS35 retromer complex component involved_in ISO (MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:5694519 NCBI chr 6:37,944,099...37,977,091
Ensembl chr 6:37,944,127...37,986,171
JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL10 interleukin 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:67,400,727...67,405,941
Ensembl chr 9:67,400,728...67,405,378
JBrowse link
G LOC110261265 metalloproteinase inhibitor 1-like involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:10,760,556...10,762,615 JBrowse link
G LRIG2 leucine rich repeats and immunoglobulin like domains 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5702499|PMID:26651291) MGI
Ensembl
PMID:26651291 GO_REF:0000107 MGI:5702499 NCBI chr 4:107,348,662...107,511,308
Ensembl chr 4:107,348,669...107,492,516
JBrowse link
G PTPN3 protein tyrosine phosphatase non-receptor type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:250,418,131...250,583,148
Ensembl chr 1:250,418,133...250,540,480
JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:42,103,251...42,106,289
Ensembl chr  X:42,102,172...42,106,296
JBrowse link
G TIMP2 TIMP metallopeptidase inhibitor 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr12:3,254,794...3,300,835
Ensembl chr12:3,254,493...3,300,834
JBrowse link
G TIMP3 TIMP metallopeptidase inhibitor 3 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:12,185,816...12,242,599
Ensembl chr 5:12,185,818...12,242,581
JBrowse link
G TIMP4 TIMP metallopeptidase inhibitor 4 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr13:68,179,803...68,191,199
Ensembl chr13:68,179,806...68,190,942
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G QKI QKI, KH domain containing RNA binding involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,514...4,883,392
JBrowse link
G TENT2 terminal nucleotidyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:88,328,250...88,388,242
Ensembl chr 2:88,328,258...88,388,241
JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRPPRC leucine rich pentatricopeptide repeat containing acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5438202|PMID:22045337)
(MGI:5301479|PMID:21880015)
MGI
Ensembl
PMID:21880015 PMID:22045337 GO_REF:0000107 MGI:5301479 MGI:5438202 NCBI chr 3:96,474,510...96,590,706
Ensembl chr 3:96,474,549...96,595,143
JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5438202|PMID:22045337) MGI
Ensembl
PMID:22045337 GO_REF:0000107 MGI:5438202 NCBI chr 7:100,710,472...100,718,290
Ensembl chr 7:100,710,234...100,720,374
JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FXR1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:118,839,314...118,899,804
Ensembl chr13:118,839,338...118,900,136
JBrowse link
G PKP1 plakophilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,689,394...23,735,457
Ensembl chr10:23,689,380...23,735,453
JBrowse link
G PKP3 plakophilin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:214,238...222,762
Ensembl chr 2:214,170...223,511
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSDE1 cold shock domain containing E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:105,804,512...105,845,735
Ensembl chr 4:105,804,587...105,845,733
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,141,967...124,185,349
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,626
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,197,058...25,243,272
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,209,164...36,228,073
JBrowse link
G PAIP1 poly(A) binding protein interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:28,098,580...28,134,296
Ensembl chr16:28,098,581...28,133,788
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,114...54,598,407
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,774...168,736,604
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1CF APOBEC1 complementation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:98,908,585...98,990,362
Ensembl chr14:98,908,630...98,987,524
JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:62,811,819...62,820,532
Ensembl chr 5:62,810,879...62,820,173
JBrowse link
G DHX34 DExH-box helicase 34 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:53,131,193...53,161,369
Ensembl chr 6:53,131,241...53,161,368
JBrowse link
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B involved_in ISO (PMID:12881431) ComplexPortal PMID:12881431 NCBI chr 2:80,186,998...80,194,155 JBrowse link
G NBAS NBAS subunit of NRZ tethering complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:121,882,734...122,242,325
Ensembl chr 3:121,882,744...122,242,326
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,209,164...36,228,073
JBrowse link
G SECISBP2 SECIS binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5582859|PMID:24274065) MGI
Ensembl
PMID:24274065 GO_REF:0000107 MGI:5582859 NCBI chr14:911,985...955,978
Ensembl chr14:912,015...955,974
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:12881431) ComplexPortal PMID:12881431 NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,114...54,598,407
JBrowse link
G UPF3A UPF3A regulator of nonsense mediated mRNA decay involved_in ISO (MGI:5790140|PMID:27040500) MGI PMID:27040500 MGI:5790140 NCBI chr11:79,117,708...79,137,083
Ensembl chr11:79,118,603...79,136,222
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4A terminal nucleotidyltransferase 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:75,217,212...75,259,805
Ensembl chr16:75,217,219...75,258,556
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,605,529...34,669,278
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in ISO (PMID:18377426) UniProt PMID:18377426 NCBI chr12:27,116,579...27,119,906
Ensembl chr12:27,116,584...27,117,614
JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALAD aminolevulinate dehydratase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:254,015,426...254,027,584
Ensembl chr 1:254,012,850...254,027,508
JBrowse link
G F8A1 coagulation factor VIII-associated 1 involved_in ISO (PMID:27815841) UniProt PMID:27815841 NCBI chr  X:125,280,978...125,282,771 JBrowse link
G GABARAPL2 GABA type A receptor associated protein like 2 involved_in ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chr 6:12,122,219...12,132,986
Ensembl chr 6:12,107,422...12,132,991
JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:39,237,299...39,250,479
Ensembl chr 7:39,244,458...39,250,481
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 involved_in ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chr13:121,081,717...121,117,660 JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:66,649,363...66,699,647
Ensembl chr15:66,649,049...66,699,950
JBrowse link
G OPHN1 oligophrenin 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:54,056,504...54,617,045
Ensembl chr  X:54,055,092...54,616,959
JBrowse link
G PRKCG protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:56,213,479...56,235,683
Ensembl chr 6:56,213,480...56,234,210
JBrowse link
G PSME3IP1 proteasome activator subunit 3 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:19,098,097...19,154,288
Ensembl chr 6:19,102,013...19,154,177
JBrowse link
G PSMF1 proteasome inhibitor subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,118,324...34,164,723
Ensembl chr17:34,098,991...34,169,287
JBrowse link
G SCO1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO (MGI:5643882|PMID:25683716) MGI PMID:25683716 MGI:5643882 NCBI chr12:55,406,730...55,424,120
Ensembl chr12:55,405,483...55,424,118
JBrowse link
G USP19 ubiquitin specific peptidase 19 involved_in ISO (MGI:5614537|PMID:25088257) ParkinsonsUK-UCL PMID:25088257 MGI:5614537 NCBI chr13:31,726,668...31,738,135
Ensembl chr13:31,726,672...31,737,981
JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG5 BAG cochaperone 5 involved_in IEA Ensembl GO_REF:0000107
G BAG6 BAG cochaperone 6 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:23,756,897...23,768,659
Ensembl chr 7:23,756,899...23,775,892
JBrowse link
G CAMLG calcium modulating ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:136,957,626...136,967,944
Ensembl chr 2:136,957,508...136,968,382
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,860,052...6,874,334
Ensembl chr14:6,859,664...6,874,327
JBrowse link
G CLEC16A C-type lectin domain containing 16A acts_upstream_of_or_within ISO (MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:5603233 NCBI chr 3:31,938,133...32,158,343
Ensembl chr 3:31,938,135...32,158,320
JBrowse link
G DDRGK1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:32,479,981...32,491,401
Ensembl chr17:32,479,977...32,491,396
JBrowse link
G EIF3H eukaryotic translation initiation factor 3 subunit H involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:21,955,026...22,053,683
Ensembl chr 4:21,954,874...22,058,699
JBrowse link
G FHIT fragile histidine triad diadenosine triphosphatase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr13:41,443,963...42,884,799
Ensembl chr13:41,443,965...42,392,817
JBrowse link
G GIPC1 GIPC PDZ domain containing family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:64,780,447...64,794,922
Ensembl chr 2:64,780,442...64,794,919
JBrowse link
G HFE homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:20,758,604...20,767,004
Ensembl chr 7:20,758,741...20,767,000
JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:39,237,299...39,250,479
Ensembl chr 7:39,244,458...39,250,481
JBrowse link
G KHNYN KH and NYN domain containing involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:74,854,209...74,872,491
Ensembl chr 7:74,854,379...74,874,882
JBrowse link
G KLHL40 kelch like family member 40 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:5586592|PMID:24960163) MGI
TreeGrafter
GO_Central
PMID:24960163 GO_REF:0000033 GO_REF:0000118 MGI:5586592 NCBI chr13:26,202,607...26,211,528
Ensembl chr13:26,202,677...26,211,522
JBrowse link
G MAP1A microtubule associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:5703671 NCBI chr 1:127,916,639...127,936,952
Ensembl chr 1:127,916,644...127,936,955
JBrowse link
G MTM1 myotubularin 1 acts_upstream_of_or_within