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ONTOLOGY REPORT - ANNOTATIONS

Term:macromolecule catabolic process
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Accession:GO:0009057 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
Synonyms:exact_synonym: biopolymer catabolic process;   macromolecule breakdown;   macromolecule catabolism;   macromolecule degradation
 narrow_synonym: multicellular organismal macromolecule catabolic process
 related_synonym: cellular macromolecule catabolic process;   cellular macromolecule catabolism;   cellular macromolecule degradation
 alt_id: GO:0043285;   GO:0044266

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macromolecule catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln6 CLN6 transmembrane ER protein acts_upstream_of_or_within ISO (MGI:3656423|PMID:15647513) MGI PMID:15647513 MGI:3656423 NCBI chrNW_004955450:7,876,572...7,885,305
Ensembl chrNW_004955450:7,876,522...7,886,581 		JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO (MGI:3656423|PMID:15647513) MGI PMID:15647513 MGI:3656423 NCBI chrNW_004955403:57,926,711...57,938,698
Ensembl chrNW_004955403:57,924,873...57,938,690 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within ISO (MGI:3656423|PMID:15647513) MGI PMID:15647513 MGI:3656423 NCBI chrNW_004955452:17,518,345...17,549,112
Ensembl chrNW_004955452:17,529,115...17,549,664 		JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:26489465) UniProt PMID:26489465 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319 		JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:28297718) CACAO PMID:28297718 NCBI chrNW_004955418:30,795...33,394
Ensembl chrNW_004955418:30,893...32,936 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904 		JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO (PMID:28275056)
(PMID:16126846)		 CACAO
UniProt		 PMID:16126846 PMID:28275056 NCBI chrNW_004955495:3,183,083...3,194,356
Ensembl chrNW_004955495:3,183,179...3,193,376 		JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:24726324) UniProt PMID:24726324 NCBI chrNW_004955435:16,093,471...16,114,735
Ensembl chrNW_004955435:16,092,790...16,117,206 		JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in ISO (PMID:29180010)
(MGI:6105829|PMID:27616329)		 UniProt PMID:27616329 PMID:29180010 MGI:6105829 NCBI chrNW_004955486:9,736,801...9,744,659
Ensembl chrNW_004955486:9,737,365...9,744,111 		JBrowse link
G Qki QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) UniProt PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:28335005) CACAO PMID:28335005 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807 		JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:23125361) CACAO PMID:23125361 NCBI chrNW_004955421:97,130...174,326
Ensembl chrNW_004955421:97,772...168,432 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:26255671)
(PMID:24726324)		 UniProt PMID:24726324 PMID:26255671 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:19909337)
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560), (MGI:5751631|PMID:26255671)		 UniProt PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 More... MGI:3842851 MGI:5706859 MGI:5706909 MGI:5707103 MGI:5751631 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
G Zc3h12d zinc finger CCCH-type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chrNW_004955439:11,761,099...11,787,508
Ensembl chrNW_004955439:11,768,812...11,785,230 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15766526)
(MGI:5795824|PMID:17288565)
(MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233)
(PMID:11719186), (PMID:15687258), (PMID:20221403), (PMID:27193233), (PMID:9703499)		 UniProt PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 More... MGI:5784976 MGI:5788345 MGI:5795824 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO (PMID:12198173), (PMID:25014217), (PMID:25106868)
(MGI:5779430|PMID:27102483), (MGI:5784968|PMID:24700863)
(MGI:4818820|PMID:20622884), (MGI:5784967|PMID:24733888), (MGI:5784976|PMID:22701344)
(PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:26542173)		 UniProt PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... MGI:4818820 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (PMID:25106868)
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344)		 UniProt PMID:20622884 PMID:22701344 PMID:25106868 MGI:4818820 MGI:5784976 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO (PMID:22547059) HGNC PMID:22547059 NCBI chrNW_004955406:4,589,849...4,606,380
Ensembl chrNW_004955406:4,589,849...4,606,380 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISO (PMID:14517288), (PMID:26489465), (PMID:29180010)
(MGI:6105829|PMID:27616329)
(PMID:19029303)		 UniProt PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 MGI:6105829 NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO (PMID:12034726) UniProt PMID:12034726 NCBI chrNW_004955464:8,699,142...8,847,289
Ensembl chrNW_004955464:8,699,088...8,788,878 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chrNW_004955408:32,718,736...32,719,409 JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) UniProt PMID:16010978 NCBI chrNW_004955550:1,949,975...2,002,297
Ensembl chrNW_004955550:1,949,975...2,002,297 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) UniProt PMID:14517288 PMID:15014438 PMID:20932473 NCBI chrNW_004955406:42,231,858...42,276,477
Ensembl chrNW_004955406:42,231,858...42,276,477 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492 		JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within ISO (MGI:4367529|PMID:19508861) MGI PMID:19508861 MGI:4367529 NCBI chrNW_004955516:904,852...934,313
Ensembl chrNW_004955516:904,062...934,313 		JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chrNW_004955445:2,036,314...2,050,882
Ensembl chrNW_004955445:2,036,124...2,052,139 		JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:34160127)
(MGI:6859910|PMID:29844590)		 UniProt PMID:29844590 PMID:34160127 MGI:6859910 NCBI chrNW_004955443:6,940,523...7,100,130
Ensembl chrNW_004955443:6,940,523...7,100,130 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:17481916) BHF-UCL PMID:17481916 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chrNW_004955412:27,303,548...27,315,031
Ensembl chrNW_004955412:27,312,489...27,315,031 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:15014438) UniProt PMID:15014438 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
acrosome matrix dispersal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acr acrosin ISO RGD PMID:28859281 RGD:13464336 NCBI chrNW_004955413:33,721,984...33,728,088 JBrowse link
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc20 cell division cycle 20 involved_in ISO (PMID:17443180)
(PMID:18753608)		 UniProt
AgBase		 PMID:17443180 PMID:18753608 NCBI chrNW_004955537:2,941,265...2,945,158
Ensembl chrNW_004955537:2,941,265...2,945,158 		JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within ISO (PMID:10500095) MGI PMID:10500095 NCBI chrNW_004955453:9,546,554...9,629,976
Ensembl chrNW_004955453:9,564,522...9,629,976 		JBrowse link
G Ecrg4 ECRG4 augurin precursor acts_upstream_of_or_within ISO (MGI:4454240|PMID:20404145) MGI PMID:20404145 MGI:4454240 NCBI chrNW_004955470:10,646,585...10,655,311
Ensembl chrNW_004955470:10,645,750...10,659,388 		JBrowse link
G Fbxo31 F-box protein 31 involved_in ISO (PMID:19412162) UniProt PMID:19412162 NCBI chrNW_004955541:1,811,010...1,828,734
Ensembl chrNW_004955541:1,811,010...1,828,724 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in ISO (PMID:18753608)
(PMID:14701726), (PMID:18662541), (PMID:21596315)
(PMID:18662541), (PMID:21596315)		 AgBase
UniProt		 PMID:14701726 PMID:18662541 PMID:18753608 PMID:21596315 NCBI chrNW_004955495:5,481,914...5,503,690
Ensembl chrNW_004955495:5,481,916...5,505,521 		JBrowse link
G Ube2c ubiquitin conjugating enzyme E2 C involved_in ISO (PMID:19822757), (PMID:9122200) UniProt PMID:9122200 PMID:19822757 NCBI chrNW_004955445:11,474,826...11,479,479
Ensembl chrNW_004955445:11,469,063...11,478,759 		JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S involved_in ISO (PMID:19820702), (PMID:19822757) UniProt PMID:19820702 PMID:19822757 NCBI chrNW_004955567:854,518...859,606
Ensembl chrNW_004955567:854,518...859,993 		JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffb DNA fragmentation factor subunit beta acts_upstream_of_or_within
involved_in		 ISO (PMID:15572351)
(PMID:22253444)		 RGD
MGI
CAFA		 PMID:11425895 PMID:15572351 PMID:22253444 RGD:628524 NCBI chrNW_004955486:7,836,013...7,849,875
Ensembl chrNW_004955486:7,838,273...7,850,180 		JBrowse link
G Dnase1l3 deoxyribonuclease 1 like 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:23229555)
(MGI:2385551|PMID:12050166)		 UniProt
MGI		 PMID:12050166 PMID:23229555 MGI:2385551 NCBI chrNW_004955430:7,867,172...7,892,079
Ensembl chrNW_004955430:7,867,109...7,892,079 		JBrowse link
G Endog endonuclease G acts_upstream_of_or_within ISO (MGI:3029597|PMID:14663139) MGI PMID:14663139 MGI:3029597 NCBI chrNW_004955570:1,200,461...1,203,566
Ensembl chrNW_004955570:1,200,996...1,203,566 		JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:16153597) UniProt PMID:16153597 NCBI chrNW_004955501:83,965...84,476 JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in ISO (MGI:3622894|PMID:11403940) MGI PMID:11403940 MGI:3622894 NCBI chrNW_004955424:20,329,009...20,443,652
Ensembl chrNW_004955424:20,327,754...20,445,980 		JBrowse link
CAT tailing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nemf nuclear export mediator factor involved_in ISO (PMID:33406423), (PMID:33909987) UniProt PMID:33406423 PMID:33909987 NCBI chrNW_004955409:12,855,655...12,901,673
Ensembl chrNW_004955409:12,855,749...12,900,702 		JBrowse link
chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chrNW_004955411:31,501,191...31,646,407
Ensembl chrNW_004955411:31,522,420...31,646,827 		JBrowse link
G Atg7 autophagy related 7 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236 		JBrowse link
G Bag3 BAG cochaperone 3 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chrNW_004955551:446,322...468,329
Ensembl chrNW_004955551:446,605...469,207 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within		 ISO PMID:18644871 ParkinsonsUK-UCL
MGI		 PMID:18644871 RGD:10412301 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 involved_in
acts_upstream_of_or_within		 ISO PMID:11082038
(PMID:36586411)
(MGI:3813410|PMID:18644871)
(MGI:5805578|PMID:27628032)
(MGI:3813419|PMID:18579532)
(PMID:24880125), (PMID:27628032), (PMID:8662539)		 ParkinsonsUK-UCL
UniProt
MGI		 PMID:8662539 PMID:11082038 PMID:18579532 PMID:18644871 PMID:24880125 More... MGI:3813410 MGI:3813419 MGI:5805578 RGD:1581607 NCBI chrNW_004955572:1,423,048...1,464,443
Ensembl chrNW_004955572:1,422,981...1,462,622 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chrNW_004955442:16,521,130...16,523,733
Ensembl chrNW_004955442:16,521,130...16,523,468 		JBrowse link
G Synpo2 synaptopodin 2 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chrNW_004955428:21,152,210...21,323,254
Ensembl chrNW_004955428:21,154,277...21,360,960 		JBrowse link
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chit1 chitinase 1 involved_in ISO (PMID:19725875) UniProt PMID:19725875 NCBI chrNW_004955406:39,229,161...39,253,328
Ensembl chrNW_004955406:39,229,356...39,241,540 		JBrowse link
G Ctbs chitobiase ISO RGD PMID:2751306 RGD:2301430 NCBI chrNW_004955423:9,327,945...9,343,923
Ensembl chrNW_004955423:9,327,945...9,343,923 		JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gusb glucuronidase beta involved_in ISO (MGI:7281718|PMID:23897660) MGI PMID:23897660 MGI:7281718 NCBI chrNW_004955456:8,377,161...8,392,298
Ensembl chrNW_004955456:8,378,654...8,392,252 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in ISO (MGI:5428797|PMID:22451654) MGI PMID:22451654 MGI:5428797 NCBI chrNW_004955425:25,942,341...25,961,312
Ensembl chrNW_004955425:25,942,278...25,961,312 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISO (MGI:5428797|PMID:22451654) MGI PMID:22451654 MGI:5428797 NCBI chrNW_004955532:2,113,016...2,116,093
Ensembl chrNW_004955532:2,112,771...2,115,952 		JBrowse link
G Hyal4 hyaluronidase 4 acts_upstream_of_or_within ISO (MGI:5490850|PMID:23086929) MGI PMID:23086929 MGI:5490850 NCBI chrNW_004955479:5,355,667...5,364,092
Ensembl chrNW_004955479:5,355,667...5,364,444 		JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955435:18,009,228...18,050,329
Ensembl chrNW_004955435:18,008,352...18,050,329 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303)
(PMID:19029303), (PMID:29476152)		 UniProt PMID:19029303 PMID:29476152 NCBI chrNW_004955451:12,312,715...12,348,663
Ensembl chrNW_004955451:12,312,715...12,348,663 		JBrowse link
G Igf2bp2 insulin like growth factor 2 mRNA binding protein 2 involved_in ISO (PMID:29476152) UniProt PMID:29476152 NCBI chrNW_004955420:21,818,970...21,957,295
Ensembl chrNW_004955420:21,818,972...21,958,440 		JBrowse link
G Igf2bp3 insulin like growth factor 2 mRNA binding protein 3 involved_in ISO (PMID:29476152) UniProt PMID:29476152 NCBI chrNW_004955410:25,605,323...25,734,845
Ensembl chrNW_004955410:25,605,323...25,731,169 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955446:18,801,971...18,830,816
Ensembl chrNW_004955446:18,801,578...18,831,963 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:19029303)
(PMID:11051545), (PMID:19029303)		 UniProt
ComplexPortal		 PMID:11051545 PMID:19029303 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938 		JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708 		JBrowse link
CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in ISO (PMID:19056938) UniProt PMID:19056938 NCBI chrNW_004955404:33,897,681...33,924,069
Ensembl chrNW_004955404:33,897,237...33,924,069 		JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:19056938) UniProt PMID:19056938 NCBI chrNW_004955486:2,601,362...2,626,451
Ensembl chrNW_004955486:2,601,322...2,626,876 		JBrowse link
G Exosc3 exosome component 3 involved_in ISO (PMID:19056938) UniProt PMID:19056938 NCBI chrNW_004955419:28,683,896...28,692,006
Ensembl chrNW_004955419:28,683,896...28,693,395 		JBrowse link
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf126 ring finger protein 126 involved_in ISO (PMID:24981174) UniProt PMID:24981174 NCBI chrNW_004955495:7,083,952...7,098,442
Ensembl chrNW_004955495:7,095,336...7,102,757 		JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within
involved_in		 ISO (MGI:3807625|PMID:18625844)
(PMID:31439799)		 MGI
UniProt		 PMID:18625844 PMID:31439799 MGI:3807625 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Noct nocturnin acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chrNW_004955497:7,500,478...7,646,541
Ensembl chrNW_004955497:7,500,748...7,647,255 		JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor involved_in ISO (PMID:20584987), (PMID:20852261) UniProt PMID:20584987 PMID:20852261 NCBI chrNW_004955511:4,090,841...4,119,077
Ensembl chrNW_004955511:4,092,257...4,119,077 		JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B involved_in ISO (MGI:5608575|PMID:24240681) MGI PMID:24240681 MGI:5608575 NCBI chrNW_004955425:22,120,507...22,281,221
Ensembl chrNW_004955425:22,119,930...22,279,006 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in ISO (MGI:3722584|PMID:11707436) MGI PMID:11707436 MGI:3722584 NCBI chrNW_004955450:4,790,342...4,806,862
Ensembl chrNW_004955450:4,790,268...4,806,734 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in ISO (MGI:3722584|PMID:11707436) MGI PMID:11707436 MGI:3722584 NCBI chrNW_004955425:25,942,341...25,961,312
Ensembl chrNW_004955425:25,942,278...25,961,312 		JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO (MGI:7310027|PMID:30064964) MGI PMID:30064964 MGI:7310027 NCBI chrNW_004955498:1,863,002...1,886,720
Ensembl chrNW_004955498:1,860,628...1,886,867 		JBrowse link
G Idua alpha-L-iduronidase involved_in
acts_upstream_of_or_within		 ISO (PMID:24036510)
(MGI:7310026|PMID:25854773)
(MGI:4414887|PMID:19751987)
(MGI:4397742|PMID:19834056)		 UniProt
MGI		 PMID:19751987 PMID:19834056 PMID:24036510 PMID:25854773 MGI:4397742 MGI:4414887 MGI:7310026 NCBI chrNW_004955514:474,830...488,007
Ensembl chrNW_004955514:475,731...488,007 		JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO (PMID:1627644) UniProt PMID:1627644 NCBI chrNW_004955550:1,273,170...1,275,843
Ensembl chrNW_004955550:1,273,284...1,279,743 		JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO (PMID:19944011) CAFA PMID:19944011 NCBI chrNW_004955486:7,836,013...7,849,875
Ensembl chrNW_004955486:7,838,273...7,850,180 		JBrowse link
G Dnase1 deoxyribonuclease 1 involved_in ISO (MGI:6094744|PMID:29191910) UniProt PMID:29191910 MGI:6094744 NCBI chrNW_004955442:13,733,107...13,736,527 JBrowse link
G Dnase1l2 deoxyribonuclease 1 like 2 acts_upstream_of_or_within ISO (MGI:5308183|PMID:21307874) MGI PMID:21307874 MGI:5308183 NCBI chrNW_004955442:15,028,168...15,031,110
Ensembl chrNW_004955442:15,028,168...15,031,110 		JBrowse link
G Dnase1l3 deoxyribonuclease 1 like 3 involved_in ISO (MGI:6094744|PMID:29191910) UniProt PMID:29191910 MGI:6094744 NCBI chrNW_004955430:7,867,172...7,892,079
Ensembl chrNW_004955430:7,867,109...7,892,079 		JBrowse link
G Fbh1 F-box DNA helicase 1 acts_upstream_of_or_within ISO (PMID:23361013) MGI PMID:23361013 NCBI chrNW_004955421:22,535,777...22,579,965
Ensembl chrNW_004955421:22,535,777...22,579,965 		JBrowse link
G Isg20 interferon stimulated exonuclease gene 20 involved_in ISO (PMID:11401564) UniProt PMID:11401564 NCBI chrNW_004955416:16,305,534...16,321,596
Ensembl chrNW_004955416:16,311,499...16,321,102 		JBrowse link
G LOC102020128 histone-lysine N-methyltransferase SETMAR involved_in ISO (PMID:24573677)
(PMID:20521842), (PMID:21491884)		 UniProt PMID:20521842 PMID:21491884 PMID:24573677 NCBI chrNW_004955421:9,066,906...9,080,352 JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit acts_upstream_of_or_within ISO (PMID:23361013) MGI PMID:23361013 NCBI chrNW_004955422:19,471,552...19,479,121
Ensembl chrNW_004955422:19,471,552...19,479,121 		JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease involved_in ISO (PMID:21602889) ARUK-UCL PMID:21602889 NCBI chrNW_004955513:2,745,220...2,754,927
Ensembl chrNW_004955513:2,745,842...2,752,792 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:3834787|PMID:18724932), (MGI:4414715|PMID:19923437), (MGI:5562498|PMID:23993650)
(MGI:4848004|PMID:20871604)
(MGI:5637600|PMID:25848017)		 MGI PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 MGI:3834787 MGI:4414715 MGI:4848004 MGI:5562498 MGI:5637600 NCBI chrNW_004955532:533,877...535,767
Ensembl chrNW_004955532:533,877...535,767 		JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dna2 DNA replication helicase/nuclease 2 involved_in ISO (PMID:18995831) UniProt PMID:18995831 NCBI chrNW_004955425:20,664,412...20,705,070
Ensembl chrNW_004955425:20,661,727...20,702,754 		JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in ISO (PMID:18995831) UniProt PMID:18995831 NCBI chrNW_004955511:5,918,667...5,922,506
Ensembl chrNW_004955511:5,918,667...5,922,506 		JBrowse link
elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cela1 chymotrypsin like elastase 1 acts_upstream_of_or_within ISO (MGI:5641427|PMID:24793170) MGI PMID:24793170 MGI:5641427 NCBI chrNW_004955547:1,810,680...1,823,938
Ensembl chrNW_004955547:1,810,670...1,824,409 		JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in ISO (PMID:29101312) ARUK-UCL PMID:29101312 NCBI chrNW_004955412:6,045,146...6,057,112
Ensembl chrNW_004955412:6,045,100...6,057,262 		JBrowse link
epidermal growth factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:18272684)
(PMID:16282324)		 BHF-UCL
UniProt		 PMID:16282324 PMID:18272684 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link
G Snx5 sorting nexin 5 ISO RGD PMID:16487940 RGD:13508623 NCBI chrNW_004955415:26,786,836...26,805,762
Ensembl chrNW_004955415:26,785,326...26,796,566 		JBrowse link
ER-associated misfolded protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor involved_in ISO (PMID:21857022) UniProt PMID:21857022 NCBI chrNW_004955424:11,259,288...11,262,413
Ensembl chrNW_004955424:11,259,432...11,262,269 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:23129660), (PMID:24981174) UniProt PMID:23129660 PMID:24981174 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003 		JBrowse link
G Derl1 derlin 1 involved_in ISO (PMID:24089527) ParkinsonsUK-UCL PMID:24089527 NCBI chrNW_004955540:1,918,230...1,944,186
Ensembl chrNW_004955540:1,917,655...1,944,214 		JBrowse link
G Ngly1 N-glycanase 1 ISO RGD PMID:32259258 RGD:39457703 NCBI chrNW_004955430:17,564,319...17,645,564
Ensembl chrNW_004955430:17,564,319...17,645,564 		JBrowse link
G Rnf5 ring finger protein 5 involved_in ISO (PMID:19269966) UniProt PMID:19269966 NCBI chrNW_004955437:643,133...645,528
Ensembl chrNW_004955437:643,170...645,528 		JBrowse link
G Sdf2l1 stromal cell derived factor 2 like 1 acts_upstream_of_or_within ISO PMID:23444373 MGI PMID:23444373 RGD:8554667 NCBI chrNW_004955442:17,468,302...17,470,296
Ensembl chrNW_004955442:17,468,302...17,470,296 		JBrowse link
G Tor1a torsin family 1 member A involved_in ISO (MGI:3712415|PMID:17200151) UniProt PMID:17200151 MGI:3712415 NCBI chrNW_004955513:30,655...36,299
Ensembl chrNW_004955513:30,655...36,360 		JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in ISO (PMID:24089527) ParkinsonsUK-UCL PMID:24089527 NCBI chrNW_004955442:18,548,545...18,568,989
Ensembl chrNW_004955442:18,548,545...18,569,366 		JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:24089527) ParkinsonsUK-UCL PMID:24089527 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076 		JBrowse link
ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk2 BR serine/threonine kinase 2 involved_in ISO (PMID:23907667) ParkinsonsUK-UCL PMID:23907667 NCBI chrNW_004955476:10,911,515...10,951,544
Ensembl chrNW_004955476:10,911,515...10,929,183 		JBrowse link
G Ccdc47 coiled-coil domain containing 47 involved_in ISO (PMID:25009997) UniProt PMID:25009997 NCBI chrNW_004955478:8,053,057...8,074,530
Ensembl chrNW_004955478:8,053,057...8,074,820 		JBrowse link
G Derl1 derlin 1 involved_in ISO (PMID:25239945) ParkinsonsUK-UCL PMID:25239945 NCBI chrNW_004955540:1,918,230...1,944,186
Ensembl chrNW_004955540:1,917,655...1,944,214 		JBrowse link
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 involved_in ISO (PMID:21148293), (PMID:21150129) UniProt PMID:21148293 PMID:21150129 NCBI chrNW_004955437:19,266,206...19,285,654
Ensembl chrNW_004955437:19,266,206...19,288,854 		JBrowse link
G Rcn3 reticulocalbin 3 involved_in ISO (MGI:6201885|PMID:26252542) UniProt PMID:26252542 MGI:6201885 NCBI chrNW_004955559:1,309,621...1,319,925
Ensembl chrNW_004955559:1,309,621...1,319,925 		JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (MGI:5437551|PMID:22795130) UniProt PMID:22795130 MGI:5437551 NCBI chrNW_004955453:7,527,090...7,656,689
Ensembl chrNW_004955453:7,528,916...7,644,477 		JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:25239945) ParkinsonsUK-UCL PMID:25239945 NCBI chrNW_004955540:3,140,649...3,153,546
Ensembl chrNW_004955540:3,140,649...3,153,546 		JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO (PMID:24019521) ParkinsonsUK-UCL PMID:24019521 NCBI chrNW_004955455:5,351,530...5,394,615
Ensembl chrNW_004955455:5,351,488...5,395,026 		JBrowse link
G Rnf5 ring finger protein 5 involved_in ISO (PMID:24019521) ParkinsonsUK-UCL PMID:24019521 NCBI chrNW_004955437:643,133...645,528
Ensembl chrNW_004955437:643,170...645,528 		JBrowse link
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase involved_in ISO (PMID:21454652), (PMID:26471130)
(MGI:5606246|PMID:25066055)		 ParkinsonsUK-UCL
UniProt		 PMID:21454652 PMID:25066055 PMID:26471130 MGI:5606246 NCBI chrNW_004955438:5,030,915...5,082,015
Ensembl chrNW_004955438:5,030,915...5,082,118 		JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (PMID:26471130)
(MGI:5645202|PMID:21454652)
(PMID:22590560)		 UniProt
ParkinsonsUK-UCL		 PMID:21454652 PMID:22590560 PMID:26471130 MGI:5645202 NCBI chrNW_004955422:20,067,933...20,074,947
Ensembl chrNW_004955422:20,068,848...20,073,850 		JBrowse link
G Ubxn6 UBX domain protein 6 involved_in ISO (PMID:19275885) UniProt PMID:19275885 NCBI chrNW_004955495:4,456,182...4,465,954
Ensembl chrNW_004955495:4,456,308...4,466,254 		JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:20104022)
(PMID:24129571), (PMID:25088257)
(PMID:25088257)		 UniProt
ParkinsonsUK-UCL		 PMID:20104022 PMID:24129571 PMID:25088257 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076 		JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex subunit 6 involved_in ISO (PMID:20065043) UniProt PMID:20065043 NCBI chrNW_004955408:170,399...239,492
Ensembl chrNW_004955408:170,399...218,040 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:20065043), (PMID:21336257) UniProt PMID:20065043 PMID:21336257 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Cnot8 CCR4-NOT transcription complex subunit 8 involved_in ISO (PMID:20065043) UniProt PMID:20065043 NCBI chrNW_004955408:9,112,208...9,132,650
Ensembl chrNW_004955408:9,112,208...9,132,758 		JBrowse link
G Exosc3 exosome component 3 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chrNW_004955419:28,683,896...28,692,006
Ensembl chrNW_004955419:28,683,896...28,693,395 		JBrowse link
G Exosc5 exosome component 5 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chrNW_004955555:328,130...334,106
Ensembl chrNW_004955555:326,698...334,106 		JBrowse link
G Exosc9 exosome component 9 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chrNW_004955428:18,732,733...18,743,743
Ensembl chrNW_004955428:18,731,919...18,743,756 		JBrowse link
G protein-coupled receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gprasp1 G protein-coupled receptor associated sorting protein 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:23954414) UniProt
MGI		 PMID:23954414 NCBI chrNW_004955548:132,373...137,817
Ensembl chrNW_004955548:133,425...137,468 		JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chrNW_004955408:13,883,574...13,937,798
Ensembl chrNW_004955408:13,883,574...13,937,709 		JBrowse link
G Adrb1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chrNW_004955431:19,025,663...19,027,026 JBrowse link
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in ISO (MGI:5577197|PMID:24613482)
(MGI:5617655|PMID:25092169)		 RGD
MGI		 PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 PMID:24613482 More... MGI:5577197 MGI:5617655 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chrNW_004955435:4,622,142...4,684,439
Ensembl chrNW_004955435:4,621,991...4,688,139 		JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:1351534|PMID:10625614) MGI PMID:10625614 MGI:1351534 NCBI chrNW_004955451:16,672,512...16,680,001
Ensembl chrNW_004955451:16,672,979...16,680,001 		JBrowse link
G Gaa alpha glucosidase acts_upstream_of_or_within
involved_in		 ISO (MGI:2179452|PMID:10838256)
(MGI:2157196|PMID:11785984)
(MGI:2136118|PMID:11328962)
(PMID:29061980), (PMID:9505277)		 RGD
MGI
UniProt		 PMID:2193931 PMID:8710802 PMID:9505277 PMID:10838256 PMID:11328962 More... MGI:2136118 MGI:2157196 MGI:2179452 RGD:1599504 RGD:1599506 NCBI chrNW_004955506:2,764,959...2,783,231
Ensembl chrNW_004955506:2,764,959...2,783,231 		JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of ISO (MGI:1339514|PMID:10391216) MGI PMID:10391216 MGI:1339514 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chrNW_004955500:6,979,169...7,020,375
Ensembl chrNW_004955500:6,978,893...7,022,309 		JBrowse link
G Pgm2 phosphoglucomutase 2 involved_in ISO (MGI:7261136|PMID:927504) MGI PMID:927504 MGI:7261136 NCBI chrNW_004955443:9,302,011...9,329,631
Ensembl chrNW_004955443:9,302,011...9,329,917 		JBrowse link
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 involved_in ISO (MGI:7259924|PMID:34083142) MGI PMID:34083142 MGI:7259924 NCBI chrNW_004955493:7,612,251...7,622,486
Ensembl chrNW_004955493:7,612,251...7,622,486 		JBrowse link
G Pygb glycogen phosphorylase B involved_in ISO (MGI:6717518|PMID:32446205) RGD
MGI		 PMID:10634496 PMID:11071367 PMID:16226229 PMID:32446205 MGI:6717518 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chrNW_004955415:31,254,240...31,283,651
Ensembl chrNW_004955415:31,254,204...31,283,651 		JBrowse link
G Pygl glycogen phosphorylase L involved_in ISO (MGI:6392116|PMID:31701076) RGD
MGI		 PMID:114169 PMID:6449198 PMID:15152027 PMID:31701076 MGI:6392116 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chrNW_004955409:11,970,112...12,007,102
Ensembl chrNW_004955409:11,970,112...12,007,102 		JBrowse link
G Pygm glycogen phosphorylase, muscle associated involved_in
acts_upstream_of_or_within		 ISO (MGI:6393156|PMID:31511858)
(PMID:1150650)
(PMID:8316268)
(MGI:4844074|PMID:17689562)
(MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562)		 RGD
MGI
UniProt		 PMID:1150650 PMID:6449198 PMID:8316268 PMID:10572943 PMID:11071367 More... MGI:3052259 MGI:4844074 MGI:6393156 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chrNW_004955422:20,411,480...20,424,676
Ensembl chrNW_004955422:20,411,480...20,424,931 		JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO (PMID:20810658) GO_Central PMID:20810658 NCBI chrNW_004955433:1,036,265...1,038,652 JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chrNW_004955500:6,979,169...7,020,375
Ensembl chrNW_004955500:6,978,893...7,022,309 		JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gaa alpha glucosidase involved_in ISO (MGI:2655991|PMID:12739885) MGI PMID:12739885 MGI:2655991 NCBI chrNW_004955506:2,764,959...2,783,231
Ensembl chrNW_004955506:2,764,959...2,783,231 		JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in ISO (MGI:7261139|PMID:20810658) MGI PMID:20810658 MGI:7261139 NCBI chrNW_004955413:7,653,396...7,661,835
Ensembl chrNW_004955413:7,653,396...7,661,835 		JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO (PMID:20810658)
(MGI:7261139|PMID:20810658)		 GO_Central
MGI		 PMID:20810658 MGI:7261139 NCBI chrNW_004955433:1,036,265...1,038,652 JBrowse link
glycoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 acts_upstream_of_or_within ISO (MGI:3654428|PMID:16431915) MGI PMID:16431915 MGI:3654428 NCBI chrNW_004955406:23,329,400...23,401,282
Ensembl chrNW_004955406:23,329,400...23,401,281 		JBrowse link
G Fbxo2 F-box protein 2 acts_upstream_of_or_within
involved_in		 ISO (MGI:3573989|PMID:15723043)
(MGI:4821082|PMID:12140560)		 MGI
UniProt		 PMID:12140560 PMID:15723043 MGI:3573989 MGI:4821082 NCBI chrNW_004955486:2,212,001...2,217,260
Ensembl chrNW_004955486:2,212,001...2,218,017 		JBrowse link
G Fbxo6 F-box protein 6 acts_upstream_of_or_within ISO (MGI:3573989|PMID:15723043) MGI PMID:15723043 MGI:3573989 NCBI chrNW_004955486:2,197,296...2,205,947
Ensembl chrNW_004955486:2,197,467...2,201,256 		JBrowse link
G Manba mannosidase beta involved_in
acts_upstream_of_or_within		 ISO (MGI:3615066|PMID:16377659)
(MGI:57603|PMID:3447593)		 UniProt
MGI		 PMID:3447593 PMID:16377659 MGI:3615066 MGI:57603 NCBI chrNW_004955496:5,744,374...5,837,974
Ensembl chrNW_004955496:5,744,250...5,841,293 		JBrowse link
G Neu2 neuraminidase 2 involved_in ISO (PMID:14613940) UniProt PMID:14613940 NCBI chrNW_004955453:3,054,626...3,063,070
Ensembl chrNW_004955453:3,052,297...3,061,791 		JBrowse link
G Neu4 neuraminidase 4 involved_in ISO (PMID:15213228), (PMID:15847605)
(MGI:4361102|PMID:19506080), (MGI:5427293|PMID:22393058)		 UniProt PMID:15213228 PMID:15847605 PMID:19506080 PMID:22393058 MGI:4361102 MGI:5427293 NCBI chrNW_004955542:66,214...70,456
Ensembl chrNW_004955542:66,174...71,058 		JBrowse link
G Ngly1 N-glycanase 1 involved_in ISO (PMID:15358861)
(MGI:3054122|PMID:15358861)		 UniProt PMID:15358861 MGI:3054122 NCBI chrNW_004955430:17,564,319...17,645,564
Ensembl chrNW_004955430:17,564,319...17,645,564 		JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B involved_in ISO (PMID:22607976) UniProt PMID:22607976 NCBI chrNW_004955430:22,986,673...23,070,923
Ensembl chrNW_004955430:22,986,762...23,069,383 		JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyal2 hyaluronidase 2 involved_in ISO (PMID:9712871) UniProt PMID:9712871 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726 		JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO (PMID:28593992) UniProt PMID:28593992 NCBI chrNW_004955498:1,863,002...1,886,720
Ensembl chrNW_004955498:1,860,628...1,886,867 		JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO (MGI:3697540|PMID:16979922), (MGI:5448924|PMID:22580166)
(MGI:4414887|PMID:19751987)
(MGI:5295514|PMID:21873421)
(MGI:4397742|PMID:19834056)		 RGD
MGI		 PMID:6138357 PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 More... MGI:3697540 MGI:4397742 MGI:4414887 MGI:5295514 MGI:5448924 RGD:1599427 NCBI chrNW_004955514:474,830...488,007
Ensembl chrNW_004955514:475,731...488,007 		JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 acts_upstream_of_or_within ISO (MGI:2135409|PMID:11278811) MGI PMID:11278811 MGI:2135409 NCBI chrNW_004955414:26,161,768...26,175,621
Ensembl chrNW_004955414:26,160,605...26,175,891 		JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in ISO (PMID:15146460), (PMID:7493035) UniProt PMID:7493035 PMID:15146460 NCBI chrNW_004955506:2,701,901...2,713,431
Ensembl chrNW_004955506:2,701,905...2,711,073 		JBrowse link
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc1 glypican 1 involved_in ISO (PMID:12732622) UniProt PMID:12732622 NCBI chrNW_004955542:947,556...968,295
Ensembl chrNW_004955542:947,556...968,295 		JBrowse link
G Gusb glucuronidase beta involved_in ISO (MGI:7281718|PMID:23897660), (MGI:7284274|PMID:11273777) MGI PMID:11273777 PMID:23897660 MGI:7281718 MGI:7284274 NCBI chrNW_004955456:8,377,161...8,392,298
Ensembl chrNW_004955456:8,378,654...8,392,252 		JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase involved_in ISO (MGI:3703408|PMID:16960811) MGI PMID:16960811 MGI:3703408 NCBI chrNW_004955457:13,351,963...13,386,521
Ensembl chrNW_004955457:13,349,213...13,387,251 		JBrowse link
G Hpse heparanase involved_in ISO (PMID:12213822)
(MGI:2449691|PMID:12460766)		 UniProt
MGI		 PMID:12213822 PMID:12460766 MGI:2449691 NCBI chrNW_004955474:6,367,467...6,394,395
Ensembl chrNW_004955474:6,367,467...6,394,395 		JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO (MGI:6140076|PMID:17876721) MGI PMID:17876721 MGI:6140076 NCBI chrNW_004955498:1,863,002...1,886,720
Ensembl chrNW_004955498:1,860,628...1,886,867 		JBrowse link
G Idua alpha-L-iduronidase involved_in ISO (MGI:3605936|PMID:15979918)
(MGI:7310026|PMID:25854773)		 MGI PMID:15979918 PMID:25854773 MGI:3605936 MGI:7310026 NCBI chrNW_004955514:474,830...488,007
Ensembl chrNW_004955514:475,731...488,007 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in ISO (MGI:1350713|PMID:10588735) MGI PMID:10588735 MGI:1350713 NCBI chrNW_004955451:16,445,338...16,449,243
Ensembl chrNW_004955451:16,445,338...16,450,062 		JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in ISO (PMID:15146460)
(MGI:7284274|PMID:11273777)
(MGI:2151820|PMID:10561464)		 UniProt
MGI		 PMID:10561464 PMID:11273777 PMID:15146460 MGI:2151820 MGI:7284274 NCBI chrNW_004955506:2,701,901...2,713,431
Ensembl chrNW_004955506:2,701,905...2,711,073 		JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO (MGI:4414887|PMID:19751987)
(PMID:21873421)
(MGI:5295514|PMID:21873421)
(MGI:4397742|PMID:19834056)		 MGI PMID:19751987 PMID:19834056 PMID:21873421 MGI:4397742 MGI:4414887 MGI:5295514 NCBI chrNW_004955514:474,830...488,007
Ensembl chrNW_004955514:475,731...488,007 		JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:16086026) UniProt PMID:16086026 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545 		JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955408:32,868,184...32,923,788
Ensembl chrNW_004955408:32,868,184...32,916,807 		JBrowse link
G Eri1 exoribonuclease 1 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955463:5,074,921...5,104,341
Ensembl chrNW_004955463:5,075,105...5,102,892 		JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955486:2,601,362...2,626,451
Ensembl chrNW_004955486:2,601,322...2,626,876 		JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955454:2,732,308...2,734,398
Ensembl chrNW_004955454:2,732,308...2,734,398 		JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955463:13,775,639...13,788,784
Ensembl chrNW_004955463:13,773,869...13,788,784 		JBrowse link
G Mtpap mitochondrial poly(A) polymerase involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955429:21,768,011...21,792,481
Ensembl chrNW_004955429:21,767,547...21,794,885 		JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955425:21,518,154...21,576,068
Ensembl chrNW_004955425:21,517,755...21,576,068 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955433:8,288,432...8,347,347
Ensembl chrNW_004955433:8,288,432...8,347,347 		JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955599:596,565...606,498
Ensembl chrNW_004955599:596,650...606,486 		JBrowse link
G Tut4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955464:6,610,350...6,734,606
Ensembl chrNW_004955464:6,646,245...6,734,066 		JBrowse link
G Tut7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955432:1,268,217...1,330,385
Ensembl chrNW_004955432:1,268,103...1,329,436 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:16086026) UniProt PMID:16086026 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176 		JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955508:3,441,540...3,561,896
Ensembl chrNW_004955508:3,441,683...3,561,805 		JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule (Indian blood group) involved_in ISO (PMID:17170110)
(MGI:7264268|PMID:26528478)		 UniProt
MGI		 PMID:17170110 PMID:26528478 MGI:7264268 NCBI chrNW_004955422:11,106,061...11,189,951 JBrowse link
G Cemip cell migration inducing hyaluronidase 1 involved_in ISO (PMID:23509262)
(MGI:5545862|PMID:24251095)		 UniProt PMID:23509262 PMID:24251095 MGI:5545862 NCBI chrNW_004955416:11,562,047...11,699,925
Ensembl chrNW_004955416:11,613,316...11,699,925 		JBrowse link
G Cemip2 cell migration inducing hyaluronidase 2 involved_in ISO (PMID:28246172) UniProt PMID:28246172 NCBI chrNW_004955434:1,400,949...1,477,278
Ensembl chrNW_004955434:1,400,949...1,478,440 		JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) UniProt PMID:19577615 NCBI chrNW_004955428:17,840,554...17,894,779
Ensembl chrNW_004955428:17,840,628...17,894,773 		JBrowse link
G Gusb glucuronidase beta involved_in ISO (MGI:4442520|PMID:20385825) MGI PMID:20385825 MGI:4442520 NCBI chrNW_004955456:8,377,161...8,392,298
Ensembl chrNW_004955456:8,378,654...8,392,252 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in ISO (MGI:5428797|PMID:22451654) MGI PMID:22451654 MGI:5428797 NCBI chrNW_004955450:4,790,342...4,806,862
Ensembl chrNW_004955450:4,790,268...4,806,734 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in ISO (MGI:5428797|PMID:22451654) MGI PMID:22451654 MGI:5428797 NCBI chrNW_004955425:25,942,341...25,961,312
Ensembl chrNW_004955425:25,942,278...25,961,312 		JBrowse link
G Hmmr hyaluronan mediated motility receptor involved_in ISO (MGI:7264268|PMID:26528478) MGI PMID:26528478 MGI:7264268 NCBI chrNW_004955408:16,865,066...16,895,918
Ensembl chrNW_004955408:16,865,175...16,898,328 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISO (PMID:11296287), (PMID:12084718), (PMID:17170110), (PMID:20473947), (PMID:21695196), (PMID:21699545), (PMID:21829529)
(MGI:5428797|PMID:22451654), (MGI:5828047|PMID:26887442)		 UniProt
MGI		 PMID:11296287 PMID:12084718 PMID:17170110 PMID:20473947 PMID:21695196 More... MGI:5428797 MGI:5828047 NCBI chrNW_004955532:2,113,016...2,116,093
Ensembl chrNW_004955532:2,112,771...2,115,952 		JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO PMID:19635555
(MGI:5469812|PMID:23172227), (MGI:5828047|PMID:26887442)
(PMID:17170110), (PMID:19443707), (PMID:20554532), (PMID:21699545)		 UniProt
MGI		 PMID:17170110 PMID:19443707 PMID:19635555 PMID:20554532 PMID:21699545 More... MGI:5469812 MGI:5828047 RGD:8553259 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726 		JBrowse link
G Hyal3 hyaluronidase 3 involved_in ISO (PMID:12084718), (PMID:21699545)
(MGI:4834982|PMID:20586096)		 UniProt PMID:12084718 PMID:20586096 PMID:21699545 MGI:4834982 NCBI chrNW_004955532:2,107,019...2,112,356
Ensembl chrNW_004955532:2,106,565...2,108,892 		JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in ISO (MGI:2135409|PMID:11278811) MGI PMID:11278811 MGI:2135409 NCBI chrNW_004955414:26,161,768...26,175,621
Ensembl chrNW_004955414:26,160,605...26,175,891 		JBrowse link
G Stab2 stabilin 2 involved_in ISO (MGI:5315050|PMID:22371575) MGI PMID:22371575 MGI:5315050 NCBI chrNW_004955405:38,393,636...38,533,701
Ensembl chrNW_004955405:38,393,650...38,533,815 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:17324121) UniProt PMID:17324121 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
insulin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISO PMID:11850617
(MGI:3819735|PMID:18544705)		 UniProt PMID:11850617 PMID:18544705 MGI:3819735 RGD:734645 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Ctsd cathepsin D involved_in ISO (MGI:5812606|PMID:27703010) MGI PMID:27703010 MGI:5812606 NCBI chrNW_004955422:13,576,315...13,584,267
Ensembl chrNW_004955422:13,576,202...13,584,298 		JBrowse link
G Ide insulin degrading enzyme involved_in ISO (PMID:19321446), (PMID:9231799), (PMID:9830016)
(MGI:5812606|PMID:27703010)
(MGI:5583899|PMID:24847884)		 UniProt
MGI		 PMID:9231799 PMID:9830016 PMID:19321446 PMID:24847884 PMID:27703010 MGI:5583899 MGI:5812606 NCBI chrNW_004955425:819,461...926,440
Ensembl chrNW_004955425:847,615...926,318 		JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gns glucosamine (N-acetyl)-6-sulfatase ISO RGD PMID:3161730 RGD:1600571 NCBI chrNW_004955458:11,471,376...11,500,793
Ensembl chrNW_004955458:11,471,376...11,500,838 		JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoah acyloxyacyl hydrolase involved_in ISO (PMID:1883828), (PMID:29343645) UniProt PMID:1883828 PMID:29343645 NCBI chrNW_004955460:6,750,851...6,954,185
Ensembl chrNW_004955460:6,751,153...6,934,667 		JBrowse link
lipoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apob apolipoprotein B acts_upstream_of_or_within ISO (MGI:3588634|PMID:15863839) MGI PMID:15863839 MGI:3588634 NCBI chrNW_004955469:3,437,422...3,478,408
Ensembl chrNW_004955469:3,436,450...3,478,424 		JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (MGI:3770508|PMID:17720994) MGI PMID:17720994 MGI:3770508 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO (MGI:3588634|PMID:15863839) MGI PMID:15863839 MGI:3588634 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545 		JBrowse link
G Ctsd cathepsin D involved_in ISO (PMID:16997486) ARUK-UCL PMID:16997486 NCBI chrNW_004955422:13,576,315...13,584,267
Ensembl chrNW_004955422:13,576,202...13,584,298 		JBrowse link
G Ldlr low density lipoprotein receptor acts_upstream_of_or_within ISO (MGI:3583861|PMID:15741654)
(MGI:1313233|PMID:9788969), (MGI:3576461|PMID:15805190)		 MGI PMID:9788969 PMID:15741654 PMID:15805190 MGI:1313233 MGI:3576461 MGI:3583861 NCBI chrNW_004955495:2,114,702...2,135,584
Ensembl chrNW_004955495:2,114,434...2,138,056 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (MGI:6510385|PMID:33357458) MGI PMID:33357458 MGI:6510385 NCBI chrNW_004955425:3,718,291...3,755,942
Ensembl chrNW_004955425:3,718,206...3,756,142 		JBrowse link
lncRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdr82 WD repeat domain 82 involved_in ISO (PMID:33913806)
(MGI:6867107|PMID:33767452)		 UniProt PMID:33767452 PMID:33913806 MGI:6867107 NCBI chrNW_004955532:3,860,785...3,880,714
Ensembl chrNW_004955532:3,863,492...3,880,713 		JBrowse link
G Zc3h4 zinc finger CCCH-type containing 4 involved_in ISO (PMID:33913806)
(MGI:6867107|PMID:33767452)		 UniProt PMID:33767452 PMID:33913806 MGI:6867107 NCBI chrNW_004955574:1,029,343...1,069,412
Ensembl chrNW_004955574:1,029,438...1,067,225 		JBrowse link
low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO (PMID:16912035), (PMID:18197702) HGNC-UCL PMID:16912035 PMID:18197702 NCBI chrNW_004955464:4,424,583...4,439,805
Ensembl chrNW_004955464:4,425,435...4,439,842 		JBrowse link
lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc115 coiled-coil domain containing 115 involved_in ISO (PMID:28296633) UniProt PMID:28296633 NCBI chrNW_004955459:25,649...30,215
Ensembl chrNW_004955459:25,649...30,215 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:1346962|PMID:10527801), (MGI:3757820|PMID:17855597) UniProt PMID:10527801 PMID:17855597 MGI:1346962 MGI:3757820 NCBI chrNW_004955493:6,696,520...6,707,849
Ensembl chrNW_004955493:6,696,241...6,707,849 		JBrowse link
G Dpp7 dipeptidyl peptidase 7 acts_upstream_of_or_within ISO (MGI:6101836|PMID:28728022) MGI PMID:28728022 MGI:6101836 NCBI chrNW_004955513:5,105,833...5,109,676
Ensembl chrNW_004955513:5,106,430...5,109,483 		JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO (MGI:6101836|PMID:28728022) MGI PMID:28728022 MGI:6101836 NCBI chrNW_004955451:17,368,600...17,371,981
Ensembl chrNW_004955451:17,368,428...17,372,377 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 involved_in ISO (PMID:24880125) UniProt PMID:24880125 NCBI chrNW_004955572:1,423,048...1,464,443
Ensembl chrNW_004955572:1,422,981...1,462,622 		JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of ISO (MGI:5751042|PMID:25592972), (MGI:5816436|PMID:26467158) MGI PMID:25592972 PMID:26467158 MGI:5751042 MGI:5816436 NCBI chrNW_004955413:25,346,135...25,367,782
Ensembl chrNW_004955413:25,360,806...25,367,782 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (MGI:2671637|PMID:12813057) MGI PMID:12813057 MGI:2671637 NCBI chrNW_004955437:19,667,252...19,683,669 JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within ISO (MGI:6101836|PMID:28728022) MGI PMID:28728022 MGI:6101836 NCBI chrNW_004955432:18,619,418...18,644,876
Ensembl chrNW_004955432:18,619,413...18,639,151 		JBrowse link
G Tmem199 transmembrane protein 199 involved_in ISO (PMID:28296633) UniProt PMID:28296633 NCBI chrNW_004955481:4,772,394...4,776,524
Ensembl chrNW_004955481:4,772,401...4,776,524 		JBrowse link
G Tpp1 tripeptidyl peptidase 1 acts_upstream_of_or_within ISO (MGI:6101836|PMID:28728022) MGI PMID:28728022 MGI:6101836 NCBI chrNW_004955414:22,324,847...22,330,912
Ensembl chrNW_004955414:22,324,856...22,330,912 		JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A involved_in ISO (PMID:30709847) UniProt PMID:30709847 NCBI chrNW_004955512:2,037,803...2,267,197
Ensembl chrNW_004955512:2,039,115...2,267,099 		JBrowse link
maintenance of unfolded protein involved in ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:21636303) ParkinsonsUK-UCL PMID:21636303 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003 		JBrowse link
G Get4 guided entry of tail-anchored proteins factor 4 involved_in ISO (PMID:21636303) ParkinsonsUK-UCL PMID:21636303 NCBI chrNW_004955460:8,620,913...8,634,778
Ensembl chrNW_004955460:8,620,209...8,634,778 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004955420:8,835,858...8,919,837
Ensembl chrNW_004955420:8,835,549...8,919,933 		JBrowse link
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004955421:8,196,631...8,225,561
Ensembl chrNW_004955421:8,196,557...8,225,561 		JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004955422:26,243,034...26,271,849
Ensembl chrNW_004955422:26,242,986...26,273,297 		JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in ISO (PMID:25092655)
(MGI:3654428|PMID:16431915)		 ParkinsonsUK-UCL PMID:16431915 PMID:25092655 MGI:3654428 NCBI chrNW_004955406:23,329,400...23,401,282
Ensembl chrNW_004955406:23,329,400...23,401,281 		JBrowse link
G Man1a1 mannosidase alpha class 1A member 1 involved_in ISO (PMID:27108681) UniProt PMID:27108681 NCBI chrNW_004955436:1,830,275...1,972,861
Ensembl chrNW_004955436:1,830,211...1,935,970 		JBrowse link
G Man1b1 mannosidase alpha class 1B member 1 involved_in ISO (PMID:18003979), (PMID:21062743) ParkinsonsUK-UCL PMID:18003979 PMID:21062743 NCBI chrNW_004955513:5,109,651...5,122,568
Ensembl chrNW_004955513:5,111,046...5,122,442 		JBrowse link
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hm13 histocompatibility minor 13 involved_in ISO (PMID:25239945) ParkinsonsUK-UCL PMID:25239945 NCBI chrNW_004955422:29,365,722...29,408,788
Ensembl chrNW_004955422:29,362,724...29,408,840 		JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (MGI:5437551|PMID:22795130) ParkinsonsUK-UCL PMID:22795130 MGI:5437551 NCBI chrNW_004955453:7,527,090...7,656,689
Ensembl chrNW_004955453:7,528,916...7,644,477 		JBrowse link
miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 involved_in ISO (PMID:24141620)
(MGI:5603455|PMID:25119025)
(MGI:5494337|PMID:23594738)		 UniProt PMID:23594738 PMID:24141620 PMID:25119025 MGI:5494337 MGI:5603455 NCBI chrNW_004955453:3,558,744...3,851,222
Ensembl chrNW_004955453:3,559,067...3,830,064 		JBrowse link
G Lin28a lin-28 homolog A involved_in ISO (PMID:18951094), (PMID:19703396)
(MGI:5294254|PMID:21962509)
(MGI:4359358|PMID:18604195), (MGI:4359360|PMID:18292307)		 UniProt
BHF-UCL		 PMID:18292307 PMID:18604195 PMID:18951094 PMID:19703396 PMID:21962509 MGI:4359358 MGI:4359360 MGI:5294254 NCBI chrNW_004955452:5,793,583...5,808,662
Ensembl chrNW_004955452:5,793,583...5,808,662 		JBrowse link
G Lin28b lin-28 homolog B involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chrNW_004955411:30,381,208...30,499,678 JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO (PMID:25049417) UniProt PMID:25049417 NCBI chrNW_004955442:4,255,726...4,421,083
Ensembl chrNW_004955442:4,258,692...4,422,197 		JBrowse link
G Snd1 staphylococcal nuclease and tudor domain containing 1 involved_in ISO (PMID:28546213) UniProt PMID:28546213 NCBI chrNW_004955479:8,692,674...9,124,504
Ensembl chrNW_004955479:8,692,674...9,154,272 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:25049417) UniProt PMID:25049417 NCBI chrNW_004955433:8,288,432...8,347,347
Ensembl chrNW_004955433:8,288,432...8,347,347 		JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chrNW_004955464:6,610,350...6,734,606
Ensembl chrNW_004955464:6,646,245...6,734,066 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:22055188) GO_Central PMID:22055188 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
miRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chrNW_004955452:13,935,028...13,967,281
Ensembl chrNW_004955452:13,934,346...13,968,624 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:18771919)
(MGI:5616320|PMID:16357216)
(PMID:15260970), (PMID:17524464)		 UniProt
BHF-UCL		 PMID:15260970 PMID:16357216 PMID:17524464 PMID:18771919 MGI:5616320 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Ago3 argonaute RISC catalytic component 3 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chrNW_004955452:13,977,487...14,108,729
Ensembl chrNW_004955452:13,977,481...14,094,259 		JBrowse link
G Ago4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chrNW_004955452:13,882,416...13,922,590
Ensembl chrNW_004955452:13,882,416...13,922,590 		JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:16289642) UniProt PMID:16289642 NCBI chrNW_004955435:16,093,471...16,114,735
Ensembl chrNW_004955435:16,092,790...16,117,206 		JBrowse link
mitochondrial DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Endog endonuclease G involved_in ISO (PMID:29719607) UniProt PMID:29719607 NCBI chrNW_004955570:1,200,461...1,203,566
Ensembl chrNW_004955570:1,200,996...1,203,566 		JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:21245038), (PMID:21666256) UniProt PMID:21245038 PMID:21666256 NCBI chrNW_004955430:7,272,911...7,277,726
Ensembl chrNW_004955430:7,272,765...7,277,726 		JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:20691904)
(MGI:4881376|PMID:20691904)		 UniProt PMID:20691904 MGI:4881376 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992 		JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chrNW_004955437:21,880,778...21,905,540
Ensembl chrNW_004955437:21,877,666...21,906,362 		JBrowse link
mitochondrial mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chrNW_004955437:21,880,778...21,905,540
Ensembl chrNW_004955437:21,877,666...21,906,362 		JBrowse link
mitochondrial ncRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chrNW_004955437:21,880,778...21,905,540
Ensembl chrNW_004955437:21,877,666...21,906,362 		JBrowse link
mitochondrial protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg1l AFG1 like ATPase involved_in ISO (PMID:26759378) UniProt PMID:26759378 NCBI chrNW_004955411:33,386,568...33,617,721
Ensembl chrNW_004955411:33,386,098...33,617,721 		JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:22292033) UniProt PMID:22292033 NCBI chrNW_004955477:9,621,812...9,630,406
Ensembl chrNW_004955477:9,621,812...9,638,099 		JBrowse link
G Bnip3l BCL2 interacting protein 3 like involved_in ISO (PMID:21264228) UniProt PMID:21264228 NCBI chrNW_004955403:49,122,408...49,144,162
Ensembl chrNW_004955403:49,122,408...49,144,998 		JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISO (PMID:30858161) UniProt PMID:30858161 NCBI chrNW_004955455:5,744,816...5,789,408
Ensembl chrNW_004955455:5,744,816...5,789,534 		JBrowse link
G Spata18 spermatogenesis associated 18 involved_in ISO (PMID:21264221), (PMID:21264228) UniProt PMID:21264221 PMID:21264228 NCBI chrNW_004955447:18,401,881...18,437,878 JBrowse link
G Yme1l1 YME1 like 1 ATPase involved_in ISO (PMID:27495975), (PMID:27786171) UniProt PMID:27495975 PMID:27786171 NCBI chrNW_004955429:2,550,611...2,572,472
Ensembl chrNW_004955429:2,549,954...2,572,889 		JBrowse link
mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine rich pentatricopeptide repeat containing acts_upstream_of ISO (MGI:5438202|PMID:22045337)
(MGI:5301479|PMID:21880015)		 MGI PMID:21880015 PMID:22045337 MGI:5301479 MGI:5438202 NCBI chrNW_004955441:11,012,910...11,116,965 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:18501193) UniProt PMID:18501193 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992 		JBrowse link
mitochondrial RNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chrNW_004955437:21,880,778...21,905,540
Ensembl chrNW_004955437:21,877,666...21,906,362 		JBrowse link
modification-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chfr checkpoint with forkhead and ring finger domains involved_in ISO (PMID:19182791) UniProt PMID:19182791 NCBI chrNW_004955482:233,485...267,064
Ensembl chrNW_004955482:233,486...267,064 		JBrowse link
G Isg15 ISG15 ubiquitin like modifier acts_upstream_of_or_within ISO (MGI:3511369|PMID:15485925) MGI PMID:15485925 MGI:3511369 NCBI chrNW_004955486:9,706,878...9,707,876
Ensembl chrNW_004955486:9,706,703...9,707,949 		JBrowse link
G Uba7 ubiquitin like modifier activating enzyme 7 acts_upstream_of_or_within ISO (MGI:3511369|PMID:15485925) MGI PMID:15485925 MGI:3511369 NCBI chrNW_004955532:1,697,667...1,706,668
Ensembl chrNW_004955532:1,695,956...1,706,676 		JBrowse link
G Ube2l6 ubiquitin conjugating enzyme E2 L6 acts_upstream_of_or_within ISO (MGI:3511369|PMID:15485925) MGI PMID:15485925 MGI:3511369 NCBI chrNW_004955511:2,522,850...2,528,926
Ensembl chrNW_004955511:2,522,850...2,528,926 		JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chrNW_004955452:13,977,487...14,108,729
Ensembl chrNW_004955452:13,977,481...14,094,259 		JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chrNW_004955452:13,882,416...13,922,590
Ensembl chrNW_004955452:13,882,416...13,922,590 		JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:21070968), (PMID:28002401)
(MGI:4849882|PMID:21070968)		 UniProt PMID:21070968 PMID:28002401 MGI:4849882 NCBI chrNW_004955408:32,868,184...32,923,788
Ensembl chrNW_004955408:32,868,184...32,916,807 		JBrowse link
G Dxo decapping exoribonuclease involved_in ISO (PMID:29601584)
(MGI:5488528|PMID:23523372)
(MGI:6368104|PMID:28283058)		 UniProt PMID:23523372 PMID:28283058 PMID:29601584 MGI:5488528 MGI:6368104 NCBI chrNW_004955437:482,866...484,989
Ensembl chrNW_004955437:481,554...484,989 		JBrowse link
G Khsrp KH-type splicing regulatory protein acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chrNW_004955495:3,183,083...3,194,356
Ensembl chrNW_004955495:3,183,179...3,193,376 		JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chrNW_004955437:321,367...325,556
Ensembl chrNW_004955437:320,768...325,810 		JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chrNW_004955617:42,829...47,999
Ensembl chrNW_004955617:42,447...47,999 		JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chrNW_004955428:1,931,684...1,944,445
Ensembl chrNW_004955428:1,930,937...1,946,246 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in ISO (MGI:5927282|PMID:28965759) UniProt PMID:28965759 MGI:5927282 NCBI chrNW_004955428:21,475,981...21,507,730
Ensembl chrNW_004955428:21,475,981...21,507,730 		JBrowse link
G Mettl16 methyltransferase 16, N6-methyladenosine involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chrNW_004955481:762,030...836,299
Ensembl chrNW_004955481:762,024...836,067 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:28637692 PMID:28792938 PMID:28965759 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715 		JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (MGI:4431145|PMID:20133598) UniProt PMID:20133598 MGI:4431145 NCBI chrNW_004955574:333,007...333,529
Ensembl chrNW_004955574:333,116...333,529 		JBrowse link
G Nudt12 nudix hydrolase 12 involved_in ISO (MGI:6368680|PMID:31101919) UniProt PMID:31101919 MGI:6368680 NCBI chrNW_004955418:10,459,644...10,474,124
Ensembl chrNW_004955418:10,459,638...10,474,124 		JBrowse link
G Nudt16 nudix hydrolase 16 involved_in ISO (PMID:21070968), (PMID:21337011)
(MGI:4849882|PMID:21070968)		 UniProt PMID:21070968 PMID:21337011 MGI:4849882 NCBI chrNW_004955501:7,083,068...7,085,505 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:12721301), (PMID:16055741) UniProt PMID:12721301 PMID:16055741 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992 		JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO (PMID:30930054) UniProt PMID:30930054 NCBI chrNW_004955417:13,810,596...13,822,982
Ensembl chrNW_004955417:13,810,596...13,822,982 		JBrowse link
G Slfn14 schlafen family member 14 involved_in ISO (PMID:25996083)
(MGI:5705207|PMID:25996083)		 UniProt PMID:25996083 MGI:5705207 NCBI chrNW_004955481:10,037,941...10,046,549
Ensembl chrNW_004955481:10,037,941...10,046,549 		JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:27558897), (PMID:30559377), (PMID:30930054)
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673)		 UniProt PMID:27558897 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 More... MGI:6316439 MGI:6316688 MGI:6317061 NCBI chrNW_004955452:7,783,398...7,815,468 JBrowse link
G Zc3h12d zinc finger CCCH-type containing 12D acts_upstream_of_or_within ISO (MGI:5567042|PMID:24415781) MGI PMID:24415781 MGI:5567042 NCBI chrNW_004955439:11,761,099...11,787,508
Ensembl chrNW_004955439:11,768,812...11,785,230 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within		 ISO (PMID:10330172), (PMID:20221403)
(PMID:10751406), (PMID:11782475)		 UniProt
MGI		 PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 acts_upstream_of_or_within ISO PMID:10751406 MGI PMID:10751406 RGD:1580602 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:5320815|PMID:22367205)
(PMID:34611029)		 UniProt PMID:22367205 PMID:34611029 MGI:5320815 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within ISO (MGI:49288|PMID:1370712) MGI PMID:1370712 MGI:49288 NCBI chrNW_004955540:1,805,648...1,890,409
Ensembl chrNW_004955540:1,805,666...1,890,409 		JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP Elav-like family member 1 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chrNW_004955422:742,017...817,649
Ensembl chrNW_004955422:742,017...817,647 		JBrowse link
G Cnot6l CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chrNW_004955433:2,206,462...2,290,773
Ensembl chrNW_004955433:2,213,444...2,316,049 		JBrowse link
G Fto FTO alpha-ketoglutarate dependent dioxygenase involved_in ISO (PMID:28002401), (PMID:30197295) UniProt PMID:28002401 PMID:30197295 NCBI chrNW_004955433:11,424,069...11,834,955
Ensembl chrNW_004955433:11,424,176...11,813,771 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (PMID:30067974) UniProt PMID:30067974 NCBI chrNW_004955420:9,903,736...9,966,100
Ensembl chrNW_004955420:9,903,736...9,966,100 		JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in ISO (MGI:5141571|PMID:21658585) UniProt PMID:21658585 MGI:5141571 NCBI chrNW_004955467:9,312,548...9,332,674
Ensembl chrNW_004955467:9,312,548...9,332,674 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:27157137) ParkinsonsUK-UCL PMID:27157137 NCBI chrNW_004955453:3,201,593...3,301,541
Ensembl chrNW_004955453:3,203,358...3,301,547 		JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955452:3,318,536...3,354,725
Ensembl chrNW_004955452:3,315,133...3,355,508 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5927282|PMID:28965759) UniProt PMID:24394384 PMID:28965759 MGI:5559905 MGI:5927282 NCBI chrNW_004955428:21,475,981...21,507,730
Ensembl chrNW_004955428:21,475,981...21,507,730 		JBrowse link
G Mettl16 methyltransferase 16, N6-methyladenosine involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chrNW_004955481:762,030...836,299
Ensembl chrNW_004955481:762,024...836,067 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 More... MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715 		JBrowse link
G Pum1 pumilio RNA binding family member 1 involved_in ISO (MGI:5640888|PMID:25768905) UniProt PMID:25768905 MGI:5640888 NCBI chrNW_004955452:9,487,725...9,623,565
Ensembl chrNW_004955452:9,487,725...9,624,066 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778 		JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO (PMID:30930054) UniProt PMID:30930054 NCBI chrNW_004955417:13,810,596...13,822,982
Ensembl chrNW_004955417:13,810,596...13,822,982 		JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chrNW_004955402:9,752,101...9,864,317
Ensembl chrNW_004955402:9,750,730...9,864,317 		JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401 		JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)		 UniProt PMID:32492408 PMID:32943573 MGI:6490006 NCBI chrNW_004955528:935,182...951,722
Ensembl chrNW_004955528:935,182...951,722 		JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:27558897), (PMID:30559377), (PMID:30930054), (PMID:32492408)
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673), (MGI:6490006|PMID:32943573), (MGI:6508516|PMID:31959747)
(PMID:28106072), (PMID:32169943)		 UniProt PMID:27558897 PMID:28106072 PMID:29855337 PMID:30065315 PMID:30150673 More... MGI:6316439 MGI:6316688 MGI:6317061 MGI:6490006 MGI:6508516 NCBI chrNW_004955452:7,783,398...7,815,468 JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
(PMID:28106072)		 UniProt PMID:28106072 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chrNW_004955444:15,758,596...15,789,979
Ensembl chrNW_004955444:15,758,596...15,789,979 		JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:3057047|PMID:15480992) MGI PMID:15480992 MGI:3057047 NCBI chrNW_004955413:6,471,933...6,480,475
Ensembl chrNW_004955413:6,471,953...6,480,469 		JBrowse link
G Axin2 axin 2 involved_in ISO (PMID:17072303) BHF-UCL PMID:17072303 NCBI chrNW_004955478:4,952,551...4,982,223
Ensembl chrNW_004955478:4,952,488...4,982,225 		JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISO (PMID:11574538) UniProt PMID:11574538 NCBI chrNW_004955495:6,634,389...6,640,800
Ensembl chrNW_004955495:6,634,394...6,640,800 		JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO (PMID:15766563) BHF-UCL PMID:15766563 NCBI chrNW_004955422:27,638,625...27,643,261
Ensembl chrNW_004955422:27,633,827...27,642,241 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:24335285), (PMID:32354837) UniProt PMID:24335285 PMID:32354837 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19029303)
(PMID:21613615)
(PMID:31358969)
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615)
(MGI:5922838|PMID:27609837)
(MGI:5559905|PMID:24394384)		 UniProt
MGI
CACAO		 PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 More... MGI:3037407 MGI:5287957 MGI:5559905 MGI:5922838 NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO (PMID:12358785) BHF-UCL PMID:12358785 NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:15192077 RGD:1357938 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) UniProt PMID:17174306 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO (MGI:5291883|PMID:21822257) MGI PMID:21822257 MGI:5291883 NCBI chrNW_004955406:42,056,014...42,077,701
Ensembl chrNW_004955406:42,056,014...42,077,701 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091), (PMID:28673543) UniProt PMID:25940091 PMID:28673543 NCBI chrNW_004955408:9,002,443...9,080,938
Ensembl chrNW_004955408:9,002,458...9,080,938 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO (MGI:2158083|PMID:11741878) MGI PMID:11741878 MGI:2158083 NCBI chrNW_004955406:42,231,858...42,276,477
Ensembl chrNW_004955406:42,231,858...42,276,477 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in ISO (MGI:5770021|PMID:26742488) UniProt PMID:26742488 MGI:5770021 NCBI chrNW_004955451:17,534,644...17,547,095
Ensembl chrNW_004955451:17,534,659...17,545,584 		JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694 		JBrowse link
G Noct nocturnin involved_in ISO (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) UniProt PMID:30842217 NCBI chrNW_004955438:12,726,206...12,780,364
Ensembl chrNW_004955438:12,726,357...12,780,379 		JBrowse link
G Qki QKI, KH domain containing RNA binding ISO RGD PMID:16855020 RGD:10045995 NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727 		JBrowse link
G Rbm10 RNA binding motif protein 10 ISO RGD PMID:19508861 RGD:151667451 NCBI chrNW_004955516:904,852...934,313
Ensembl chrNW_004955516:904,062...934,313 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778 		JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (MGI:5644240|PMID:25397698) MGI PMID:25397698 MGI:5644240 NCBI chrNW_004955471:12,096,400...12,167,536 JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO (MGI:85148|PMID:9009318) MGI PMID:9009318 MGI:85148 NCBI chrNW_004955453:14,980,562...14,995,118
Ensembl chrNW_004955453:14,980,562...14,995,608 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chrNW_004955451:4,992,634...4,996,619
Ensembl chrNW_004955451:4,992,634...4,999,029 		JBrowse link
G Taf15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) MGI PMID:27378374 NCBI chrNW_004955481:10,242,839...10,274,961
Ensembl chrNW_004955481:10,252,393...10,274,860 		JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in ISO (PMID:28931820)
(MGI:5926094|PMID:28931820)		 UniProt PMID:28931820 MGI:5926094 NCBI chrNW_004955435:20,790,410...20,811,730
Ensembl chrNW_004955435:20,792,773...20,811,723 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO (PMID:18794151) UniProt PMID:18794151 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886 		JBrowse link
G Traf2 TNF receptor associated factor 2 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chrNW_004955513:4,964,692...4,984,359
Ensembl chrNW_004955513:4,967,984...4,983,987 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in ISO (MGI:5291882|PMID:21822258)
(MGI:4355787|PMID:17785852)		 MGI PMID:17785852 PMID:21822258 MGI:4355787 MGI:5291882 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288 		JBrowse link
G Traf5 TNF receptor associated factor 5 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chrNW_004955489:935,601...995,162
Ensembl chrNW_004955489:949,890...995,162 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:31358969) UniProt PMID:31358969 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708 		JBrowse link
G Ybx2 Y-box binding protein 2 acts_upstream_of_or_within ISO (MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:3696301 NCBI chrNW_004955467:9,624,506...9,629,904
Ensembl chrNW_004955467:9,624,019...9,629,904 		JBrowse link
ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:26950371) BHF-UCL PMID:26950371 NCBI chrNW_004955433:8,288,432...8,347,347
Ensembl chrNW_004955433:8,288,432...8,347,347 		JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase 16, N6-methyladenosine involved_in ISO (PMID:28525753) UniProt PMID:28525753 NCBI chrNW_004955481:762,030...836,299
Ensembl chrNW_004955481:762,024...836,067 		JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha acts_upstream_of_or_within
involved_in		 ISO (MGI:2182584|PMID:10601318), (MGI:3029597|PMID:14663139)
(PMID:11371636)
(PMID:15572351)		 MGI
ComplexPortal		 PMID:10601318 PMID:11371636 PMID:14663139 PMID:15572351 MGI:2182584 MGI:3029597 NCBI chrNW_004955486:3,273,712...3,274,510 JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO (PMID:11371636) ComplexPortal PMID:11371636 NCBI chrNW_004955486:7,836,013...7,849,875
Ensembl chrNW_004955486:7,838,273...7,850,180 		JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 ISO RGD PMID:27184051 RGD:13781945 NCBI chrNW_004955486:3,637,794...3,655,744
Ensembl chrNW_004955486:3,637,794...3,655,598 		JBrowse link
G Pam16 presequence translocase associated motor 16 ISO RGD PMID:24069394 RGD:13462066 NCBI chrNW_004955442:13,087,082...13,097,048
Ensembl chrNW_004955442:13,087,092...13,097,048 		JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A involved_in ISO (PMID:12505983)
(MGI:5700310|PMID:12505983)		 ParkinsonsUK-UCL PMID:12505983 MGI:5700310 NCBI chrNW_004955445:11,399,151...11,405,069
Ensembl chrNW_004955445:11,399,151...11,405,069 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:20697033) ParkinsonsUK-UCL PMID:20697033 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403 		JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) UniProt PMID:32354837 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104 		JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin ISO RGD PMID:2001740 RGD:9590215 NCBI chrNW_004955516:958,416...978,829
Ensembl chrNW_004955516:955,680...978,910 		JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) BHF-UCL PMID:10545518 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23129660) UniProt PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389 		JBrowse link
G Svip small VCP interacting protein involved_in ISO (PMID:17872946) UniProt PMID:17872946 NCBI chrNW_004955476:3,231,789...3,236,602 JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) ParkinsonsUK-UCL PMID:19135427 NCBI chrNW_004955402:9,710,080...9,737,601
Ensembl chrNW_004955402:9,710,080...9,743,077 		JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in ISO (MGI:3813160|PMID:18606867) UniProt PMID:18606867 MGI:3813160 NCBI chrNW_004955414:14,245,682...14,260,717
Ensembl chrNW_004955414:14,245,682...14,260,717 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) ParkinsonsUK-UCL PMID:21135095 NCBI chrNW_004955599:526,792...529,825
Ensembl chrNW_004955599:526,966...529,735 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:22590560) ParkinsonsUK-UCL PMID:22590560 NCBI chrNW_004955407:17,429,299...17,572,138
Ensembl chrNW_004955407:17,429,299...17,575,262 		JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chrNW_004955408:13,883,574...13,937,798
Ensembl chrNW_004955408:13,883,574...13,937,709 		JBrowse link
G Ins insulin involved_in ISO (PMID:381941) BHF-UCL PMID:381941 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419 		JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:22848640)
(MGI:5446858|PMID:22848640)		 BHF-UCL PMID:22848640 MGI:5446858 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696 		JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme involved_in ISO (PMID:16912035) HGNC-UCL PMID:16912035 NCBI chrNW_004955416:14,915,031...14,947,634
Ensembl chrNW_004955416:14,936,546...14,949,252 		JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta involved_in ISO (PMID:25588945) UniProt PMID:25588945 NCBI chrNW_004955417:13,574,493...13,625,669
Ensembl chrNW_004955417:13,574,721...13,625,313 		JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO (MGI:5751042|PMID:25592972), (MGI:5816436|PMID:26467158) MGI PMID:25592972 PMID:26467158 MGI:5751042 MGI:5816436 NCBI chrNW_004955413:25,346,135...25,367,782
Ensembl chrNW_004955413:25,360,806...25,367,782 		JBrowse link
G Usp8 ubiquitin specific peptidase 8 involved_in ISO (PMID:27444016) FlyBase PMID:27444016 NCBI chrNW_004955409:3,839,308...3,903,595
Ensembl chrNW_004955409:3,840,007...3,891,284 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:5694519 NCBI chrNW_004955448:207,582...240,264
Ensembl chrNW_004955448:204,991...240,160 		JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 involved_in ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Lrig2 leucine rich repeats and immunoglobulin like domains 2 acts_upstream_of_or_within ISO (MGI:5702499|PMID:26651291) MGI PMID:26651291 MGI:5702499 NCBI chrNW_004955435:16,468,300...16,522,503
Ensembl chrNW_004955435:16,468,509...16,521,868 		JBrowse link
G Ptpn3 protein tyrosine phosphatase non-receptor type 3 involved_in ISO (PMID:12207026) BHF-UCL PMID:12207026 NCBI chrNW_004955419:17,560,664...17,645,420
Ensembl chrNW_004955419:17,493,518...17,645,477 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISO (PMID:12714508) UniProt PMID:12714508 NCBI chrNW_004955516:507,113...511,360
Ensembl chrNW_004955516:505,789...512,118 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 involved_in ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chrNW_004955405:41,613,976...41,655,813
Ensembl chrNW_004955405:41,613,966...41,655,813 		JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent2 terminal nucleotidyltransferase 2 involved_in ISO (PMID:23200856) UniProt PMID:23200856 NCBI chrNW_004955425:21,518,154...21,576,068
Ensembl chrNW_004955425:21,517,755...21,576,068 		JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine rich pentatricopeptide repeat containing acts_upstream_of_or_within ISO (MGI:5301479|PMID:21880015)
(MGI:5438202|PMID:22045337)		 MGI PMID:21880015 PMID:22045337 MGI:5301479 MGI:5438202 NCBI chrNW_004955441:11,012,910...11,116,965 JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein acts_upstream_of_or_within ISO (MGI:5438202|PMID:22045337) MGI PMID:22045337 MGI:5438202 NCBI chrNW_004955438:1,556,462...1,561,561 JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Pkp1 plakophilin 1 involved_in ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004955406:37,420,019...37,465,588
Ensembl chrNW_004955406:37,419,856...37,465,655 		JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004955476:11,611,240...11,619,210
Ensembl chrNW_004955476:11,611,240...11,619,780 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955435:18,009,228...18,050,329
Ensembl chrNW_004955435:18,008,352...18,050,329 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955451:12,312,715...12,348,663
Ensembl chrNW_004955451:12,312,715...12,348,663 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955446:18,801,971...18,830,816
Ensembl chrNW_004955446:18,801,578...18,831,963 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:11051545), (PMID:19029303) ComplexPortal PMID:11051545 PMID:19029303 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938 		JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor involved_in ISO (PMID:12881431) ComplexPortal PMID:12881431 NCBI chrNW_004955425:5,992,538...6,077,769
Ensembl chrNW_004955425:5,992,538...6,077,770 		JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in ISO (PMID:12881431) ComplexPortal PMID:12881431 NCBI chrNW_004955413:6,471,933...6,480,475
Ensembl chrNW_004955413:6,471,953...6,480,469 		JBrowse link
G Dhx34 DExH-box helicase 34 involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chrNW_004955574:1,248,058...1,267,399
Ensembl chrNW_004955574:1,248,021...1,267,399 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B involved_in ISO (PMID:12881431) ComplexPortal PMID:12881431 NCBI chrNW_004955408:2,060,288...2,064,998
Ensembl chrNW_004955408:2,060,829...2,065,416 		JBrowse link
G Nbas NBAS subunit of NRZ tethering complex involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chrNW_004955487:8,894,403...9,073,535
Ensembl chrNW_004955487:8,894,187...9,073,663 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:18447585) UniProt PMID:18447585 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247 		JBrowse link
G Secisbp2 SECIS binding protein 2 acts_upstream_of_or_within ISO (MGI:5582859|PMID:24274065) MGI PMID:24274065 MGI:5582859 NCBI chrNW_004955515:2,697,370...2,729,425
Ensembl chrNW_004955515:2,698,075...2,730,074 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:12881431) ComplexPortal PMID:12881431 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938 		JBrowse link
G Upf3a UPF3A regulator of nonsense mediated mRNA decay involved_in ISO (MGI:5790140|PMID:27040500) MGI PMID:27040500 MGI:5790140 NCBI chrNW_004955404:25,556...36,730 JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004955504:4,443,051...4,476,373
Ensembl chrNW_004955504:4,443,051...4,476,520 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004955433:8,288,432...8,347,347
Ensembl chrNW_004955433:8,288,432...8,347,347 		JBrowse link
G Tob1 transducer of ERBB2, 1 involved_in ISO (PMID:18377426) UniProt PMID:18377426 NCBI chrNW_004955451:10,950,270...10,963,183 JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase involved_in ISO (PMID:8175643) CAFA PMID:8175643 NCBI chrNW_004955419:14,093,010...14,104,376
Ensembl chrNW_004955419:14,093,010...14,104,545 		JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chrNW_004955484:1,991,020...2,004,925
Ensembl chrNW_004955484:1,991,020...2,004,925 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO PMID:17517623
(MGI:6148636|PMID:17517623)		 ARUK-UCL PMID:17517623 MGI:6148636 RGD:13514081 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459 		JBrowse link
G Lamp3 lysosomal associated membrane protein 3 involved_in ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G LOC102030058 protein SCO1 homolog, mitochondrial acts_upstream_of_or_within ISO (MGI:5643882|PMID:25683716) MGI PMID:25683716 MGI:5643882 NCBI chrNW_004955467:6,519,873...6,535,321
Ensembl chrNW_004955467:6,519,873...6,537,753 		JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISO (PMID:29295817) UniProt PMID:29295817 NCBI chrNW_004955449:13,834,561...13,875,864
Ensembl chrNW_004955449:13,835,811...13,859,699 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (MGI:5303043|PMID:21874017) UniProt PMID:21874017 MGI:5303043 NCBI chrNW_004955475:7,576,629...8,019,132
Ensembl chrNW_004955475:7,581,675...8,018,139 		JBrowse link
G Prkcg protein kinase C gamma involved_in ISO (MGI:5467682|PMID:23185022) UniProt PMID:23185022 MGI:5467682 NCBI chrNW_004955604:262,182...279,259
Ensembl chrNW_004955604:262,071...279,259 		JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 involved_in ISO (PMID:29934401) UniProt PMID:29934401 NCBI chrNW_004955433:14,813,688...14,843,446
Ensembl chrNW_004955433:14,813,688...14,843,223 		JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in ISO (PMID:10764772) UniProt PMID:10764772 NCBI chrNW_004955596:381,080...414,307
Ensembl chrNW_004955596:381,068...416,055 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (MGI:5614537|PMID:25088257) ParkinsonsUK-UCL PMID:25088257 MGI:5614537 NCBI chrNW_004955532:1,104,212...1,115,267
Ensembl chrNW_004955532:1,104,591...1,113,567 		JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 involved_in ISO (PMID:24475098) ParkinsonsUK-UCL PMID:24475098 NCBI chrNW_004955538:2,412,297...2,416,094
Ensembl chrNW_004955538:2,412,297...2,415,132 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (MGI:3808636|PMID:18678708) UniProt PMID:18678708 MGI:3808636 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003 		JBrowse link
G Camlg calcium modulating ligand involved_in ISO (PMID:20553626) UniProt PMID:20553626 NCBI chrNW_004955408:29,968,962...29,977,896
Ensembl chrNW_004955408:29,968,934...29,979,794 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23398316) UniProt PMID:23398316 NCBI chrNW_004955403:46,027,997...46,042,154
Ensembl chrNW_004955403:46,027,998...46,042,154 		JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO (MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:5603233 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:28263186) UniProt PMID:28263186 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856 		JBrowse link
G Eif3h eukaryotic translation initiation factor 3 subunit H involved_in ISO (PMID:32269044) FlyBase PMID:32269044 NCBI chrNW_004955417:22,757,781...22,846,349
Ensembl chrNW_004955417:22,754,395...22,846,618 		JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase involved_in ISO (PMID:15313915) UniProt PMID:15313915 NCBI chrNW_004955430:221,518...508,094 JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 involved_in ISO (MGI:3807767|PMID:11546783) BHF-UCL PMID:11546783 MGI:3807767 NCBI chrNW_004955415:33,067,689...33,077,749
Ensembl chrNW_004955415:33,067,689...33,074,730 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:24613385)
(PMID:16280321)		 UniProt
MGI		 PMID:16280321 PMID:24613385 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459 		JBrowse link
G Klhl40 kelch like family member 40 acts_upstream_of_or_within ISO (MGI:5586592|PMID:24960163) MGI PMID:24960163 MGI:5586592 NCBI chrNW_004955420:28,117,553...28,122,391
Ensembl chrNW_004955420:28,117,898...28,122,270 		JBrowse link
G Map1a microtubule associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:5703671 NCBI chrNW_004955416:10,052,964...10,073,318
Ensembl chrNW_004955416:10,053,010...10,071,421 		JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chrNW_004955498:6,329,402...6,444,708
Ensembl chrNW_004955498:6,329,275...6,445,169 		JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in ISO (MGI:3829128|PMID:17592138) UniProt PMID:17592138 MGI:3829128 NCBI chrNW_004955474:6,796,068...6,814,906
Ensembl chrNW_004955474:6,796,066...6,814,906 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) UniProt PMID:22522597 NCBI chrNW_004955574:1,505,997...1,514,680
Ensembl chrNW_004955574:1,506,022...1,517,130 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:26678539) UniProt PMID:26678539 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:17015834) ParkinsonsUK-UCL PMID:17015834 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885 		JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO (MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:5293269 NCBI chrNW_004955403:50,332,167...50,353,147
Ensembl chrNW_004955403:50,330,981...50,352,570 		JBrowse link
G Phf20l1 PHD finger protein 20 like 1 involved_in ISO (PMID:24492612) UniProt PMID:24492612 NCBI chrNW_004955461:7,391,175...7,465,012
Ensembl chrNW_004955461:7,391,175...7,465,012 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (MGI:5897550|PMID:21804542) UniProt PMID:21804542 MGI:5897550 NCBI chrNW_004955452:3,626,609...3,630,911
Ensembl chrNW_004955452:3,626,609...3,633,209 		JBrowse link
G Rybp RING1 and YY1 binding protein involved_in ISO (PMID:27060496) UniProt PMID:27060496 NCBI chrNW_004955421:15,728,778...15,803,150
Ensembl chrNW_004955421:15,728,580...15,803,150 		JBrowse link
G Sdcbp syndecan binding protein involved_in ISO (PMID:25893292) UniProt PMID:25893292 NCBI chrNW_004955454:17,093,930...17,113,491
Ensembl chrNW_004955454:17,089,232...17,113,484 		JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of_or_within ISO (MGI:3818351|PMID:17981124) MGI PMID:17981124 MGI:3818351 NCBI chrNW_004955500:6,924,445...6,978,482
Ensembl chrNW_004955500:6,926,548...6,979,230 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:3624046 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 acts_upstream_of_or_within ISO (MGI:5310666|PMID:22285184) MGI PMID:22285184 MGI:5310666 NCBI chrNW_004955420:24,594,057...24,729,108
Ensembl chrNW_004955420:24,593,830...24,729,108 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004955575:74,506...76,272
Ensembl chrNW_004955575:74,506...76,272 		JBrowse link
G Tlk2 tousled like kinase 2 involved_in ISO (PMID:20016786) UniProt PMID:20016786 NCBI chrNW_004955478:9,100,863...9,229,448
Ensembl chrNW_004955478:9,100,863...9,231,281 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO (MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:6362140 NCBI chrNW_004955412:19,670,590...19,672,495 JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:20351172) UniProt PMID:20351172 NCBI chrNW_004955599:526,792...529,825
Ensembl chrNW_004955599:526,966...529,735 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23770237) UniProt PMID:23770237 NCBI chrNW_004955406:30,432,652...30,468,741 JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:26678539) UniProt PMID:26678539 NCBI chrNW_004955442:9,316,022...9,355,751
Ensembl chrNW_004955442:9,315,225...9,356,393 		JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:33378666) UniProt PMID:33378666 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955462:2,358,842...2,435,644
Ensembl chrNW_004955462:2,358,842...2,435,628 		JBrowse link
negative regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO (MGI:5643972|PMID:25751059) UniProt PMID:25751059 MGI:5643972 NCBI chrNW_004955454:1,250,261...1,313,547
Ensembl chrNW_004955454:1,237,363...1,314,127 		JBrowse link
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 acts_upstream_of_or_within ISO (PMID:18374643) MGI PMID:18374643 NCBI chrNW_004955458:5,436,544...5,448,201
Ensembl chrNW_004955458:5,436,630...5,448,057 		JBrowse link
G Atraid all-trans retinoic acid induced differentiation factor involved_in ISO (PMID:21723284) UniProt PMID:21723284 NCBI chrNW_004955469:9,194,656...9,203,292 JBrowse link
G Azin1 antizyme inhibitor 1 involved_in ISO downregulates antizyme degradation of ODC
(PMID:17900240)		 RGD
UniProt		 PMID:8631929 PMID:17900240 RGD:633334 NCBI chrNW_004955417:27,231,695...27,259,564
Ensembl chrNW_004955417:27,231,696...27,259,564 		JBrowse link
G Azin2 antizyme inhibitor 2 involved_in ISO (PMID:17900240) UniProt PMID:17900240 NCBI chrNW_004955452:11,304,345...11,330,370
Ensembl chrNW_004955452:11,303,499...11,330,555 		JBrowse link
G Banp BTG3 associated nuclear protein acts_upstream_of_or_within ISO (MGI:3579758|PMID:15701641) MGI PMID:15701641 MGI:3579758 NCBI chrNW_004955541:2,169,303...2,256,779
Ensembl chrNW_004955541:2,169,303...2,256,779 		JBrowse link
G Cdk2 cyclin dependent kinase 2 involved_in ISO (PMID:15750306) AgBase PMID:15750306 NCBI chrNW_004955458:3,555,603...3,561,063
Ensembl chrNW_004955458:3,555,603...3,562,120 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO (PMID:16173922) UniProt PMID:16173922 NCBI chrNW_004955451:13,160,811...13,170,012
Ensembl chrNW_004955451:13,120,761...13,170,073 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (PMID:19903888) UniProt PMID:19903888 NCBI chrNW_004955419:6,229,437...6,416,619
Ensembl chrNW_004955419:6,228,591...6,416,402 		JBrowse link
G Dedd death effector domain containing acts_upstream_of_or_within ISO (MGI:5000188|PMID:21135503) MGI PMID:21135503 MGI:5000188 NCBI chrNW_004955468:12,885,547...12,897,522
Ensembl chrNW_004955468:12,885,553...12,897,164 		JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (MGI:5433472|PMID:20724702) MGI PMID:20724702 MGI:5433472 NCBI chrNW_004955424:13,756,130...13,970,437
Ensembl chrNW_004955424:13,756,130...13,970,436 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) UniProt PMID:17115032 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Fbxo43 F-box protein 43 acts_upstream_of_or_within ISO (MGI:3663227|PMID:16966421) MGI PMID:16966421 MGI:3663227 NCBI chrNW_004955417:15,394,481...15,406,751
Ensembl chrNW_004955417:15,390,969...15,406,751 		JBrowse link
G Flna filamin A involved_in ISO (PMID:18322202) BHF-UCL PMID:18322202 NCBI chrNW_004955580:874,233...895,172
Ensembl chrNW_004955580:874,233...895,232 		JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:23375502) UniProt PMID:23375502 NCBI chrNW_004955406:11,358,585...11,666,102 JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (MGI:3775717|PMID:16841086) MGI PMID:16841086 MGI:3775717 NCBI chrNW_004955411:36,403,156...36,597,660
Ensembl chrNW_004955411:36,401,842...36,512,054 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A acts_upstream_of_or_within ISO (MGI:3054180|PMID:15317856) MGI PMID:15317856 MGI:3054180 NCBI chrNW_004955442:8,171,114...8,565,187
Ensembl chrNW_004955442:8,174,232...8,562,059 		JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C acts_upstream_of_or_within ISO (MGI:3054180|PMID:15317856) MGI PMID:15317856 MGI:3054180 NCBI chrNW_004955553:1,729,431...1,746,754
Ensembl chrNW_004955553:1,729,860...1,737,751 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in ISO (MGI:6270905|PMID:20876579) ARUK-UCL PMID:20876579 MGI:6270905 NCBI chrNW_004955425:25,362,165...25,380,611
Ensembl chrNW_004955425:25,359,884...25,380,745 		JBrowse link
G Ins insulin involved_in ISO (PMID:15185208) UniProt PMID:15185208 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in ISO (PMID:17379480), (PMID:18156187)
(MGI:3843426|PMID:17379480)		 BHF-UCL PMID:17379480 PMID:18156187 MGI:3843426 NCBI chrNW_004955458:12,839,995...12,880,285
Ensembl chrNW_004955458:12,846,237...12,879,316 		JBrowse link
G LOC102027002 lanosterol 14-alpha demethylase involved_in ISO (MGI:6270905|PMID:20876579) ARUK-UCL PMID:20876579 MGI:6270905 NCBI chrNW_004955432:9,092,923...9,112,615
Ensembl chrNW_004955432:9,092,933...9,112,615 		JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 involved_in ISO (PMID:11459825) UniProt PMID:11459825 NCBI chrNW_004955428:20,421,718...20,443,394
Ensembl chrNW_004955428:20,421,723...20,430,307 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:11459826) UniProt PMID:11459826 NCBI chrNW_004955486:2,191,903...2,197,193
Ensembl chrNW_004955486:2,191,903...2,198,538 		JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in ISO (PMID:10608892) UniProt PMID:10608892 NCBI chrNW_004955406:40,346,617...40,387,977
Ensembl chrNW_004955406:40,346,588...40,387,977 		JBrowse link
G Mycbp2 MYC binding protein 2 acts_upstream_of_or_within ISO (MGI:3849342|PMID:19398581) MGI PMID:19398581 MGI:3849342 NCBI chrNW_004955404:29,932,125...30,186,236
Ensembl chrNW_004955404:29,932,125...30,186,236 		JBrowse link
G Nell1 neural EGFL like 1 involved_in ISO (PMID:21723284) UniProt PMID:21723284 NCBI chrNW_004955476:1,445,234...2,236,954
Ensembl chrNW_004955476:1,445,353...2,233,146 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO (MGI:4943392|PMID:18003616) BHF-UCL PMID:18003616 MGI:4943392 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961 		JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 involved_in ISO (PMID:15687255) UniProt PMID:15687255 NCBI chrNW_004955484:7,012,373...7,028,182
Ensembl chrNW_004955484:7,012,506...7,027,604 		JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO (MGI:4454957|PMID:20448149) MGI PMID:20448149 MGI:4454957 NCBI chrNW_004955463:8,009,436...9,037,116
Ensembl chrNW_004955463:8,009,530...9,037,116 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (MGI:5575789|PMID:24899725) ParkinsonsUK-UCL PMID:24899725 MGI:5575789 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885 		JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:24732013) UniProt PMID:24732013 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124 		JBrowse link
G Phf20l1 PHD finger protein 20 like 1 involved_in ISO (PMID:29358331) UniProt PMID:29358331 NCBI chrNW_004955461:7,391,175...7,465,012
Ensembl chrNW_004955461:7,391,175...7,465,012 		JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in ISO (PMID:11533658) ParkinsonsUK-UCL PMID:11533658 NCBI chrNW_004955495:1,250,557...1,261,617
Ensembl chrNW_004955495:1,250,453...1,266,235 		JBrowse link
G Prkcg protein kinase C gamma involved_in ISO (PMID:15808853) HGNC-UCL PMID:15808853 NCBI chrNW_004955604:262,182...279,259
Ensembl chrNW_004955604:262,071...279,259 		JBrowse link
G Rab5b RAB5B, member RAS oncogene family involved_in ISO (PMID:15750306) AgBase PMID:15750306 NCBI chrNW_004955458:3,563,363...3,582,620
Ensembl chrNW_004955458:3,576,247...3,580,192 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (MGI:3581324|PMID:15923614) MGI PMID:15923614 MGI:3581324 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516 		JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) UniProt PMID:23091056 NCBI chrNW_004955472:550,198...554,038
Ensembl chrNW_004955472:550,198...554,038 		JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) UniProt PMID:23091056 NCBI chrNW_004955434:9,675,654...9,770,174
Ensembl chrNW_004955434:9,675,654...9,770,174 		JBrowse link
G Rilp Rab interacting lysosomal protein involved_in ISO (PMID:17010938) UniProt PMID:17010938 NCBI chrNW_004955481:1,531,175...1,534,794
Ensembl chrNW_004955481:1,531,574...1,534,443 		JBrowse link
G Serpine2 serpin family E member 2 acts_upstream_of_or_within ISO (MGI:3521551|PMID:15509762)
(MGI:3654805|PMID:16319172)		 MGI PMID:15509762 PMID:16319172 MGI:3521551 MGI:3654805 NCBI chrNW_004955453:10,049,822...10,076,155
Ensembl chrNW_004955453:10,027,104...10,076,645 		JBrowse link
G Sf3b3 splicing factor 3b subunit 3 involved_in ISO (PMID:23951410) CACAO PMID:23951410 NCBI chrNW_004955484:3,307,794...3,357,600
Ensembl chrNW_004955484:3,307,794...3,357,600 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:3624046 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:20543840) UniProt PMID:20543840 NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441 		JBrowse link
G Smad3 SMAD family member 3 involved_in ISO PMID:16690606
PMID:20097766		 CACAO
BHF-UCL		 PMID:16690606 PMID:20097766 RGD:11079190 RGD:15023472 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136 		JBrowse link
G Smad4 SMAD family member 4 involved_in ISO PMID:20097766 BHF-UCL PMID:20097766 RGD:11079190 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538 		JBrowse link
G Snx12 sorting nexin 12 involved_in ISO (PMID:22719997) UniProt PMID:22719997 NCBI chrNW_004955475:10,632,938...10,641,452
Ensembl chrNW_004955475:10,474,697...10,641,723 		JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) UniProt PMID:18767904 NCBI chrNW_004955411:33,339,974...33,344,563
Ensembl chrNW_004955411:33,340,274...33,345,500 		JBrowse link
G Tmem132a transmembrane protein 132A acts_upstream_of_or_within ISO (MGI:6490019|PMID:33324648) MGI PMID:33324648 MGI:6490019 NCBI chrNW_004955511:5,567,413...5,574,759
Ensembl chrNW_004955511:5,567,415...5,574,522 		JBrowse link
G Trim40 tripartite motif containing 40 involved_in ISO (PMID:21474709) UniProt PMID:21474709 NCBI chrNW_004955583:242,054...260,565
Ensembl chrNW_004955583:242,054...259,008 		JBrowse link
negative regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955545:1,610,929...1,617,217
Ensembl chrNW_004955545:1,610,929...1,617,460 		JBrowse link
G Epha4 EPH receptor A4 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955453:12,099,800...12,240,199
Ensembl chrNW_004955453:12,099,757...12,240,199 		JBrowse link
negative regulation of receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtmr2 myotubularin related protein 2 involved_in ISO PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chrNW_004955412:693,743...764,377
Ensembl chrNW_004955412:693,743...750,154 		JBrowse link
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Derl2 derlin 2 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955467:10,824,922...10,837,408
Ensembl chrNW_004955467:10,825,341...10,837,328 		JBrowse link
G Derl3 derlin 3 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955455:8,415,868...8,418,753
Ensembl chrNW_004955455:8,415,839...8,421,762 		JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955441:19,535,425...19,557,960
Ensembl chrNW_004955441:19,535,425...19,557,458 		JBrowse link
G Os9 OS9 endoplasmic reticulum lectin involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955458:5,407,709...5,432,646
Ensembl chrNW_004955458:5,407,739...5,432,085 		JBrowse link
G Svip small VCP interacting protein involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955476:3,231,789...3,236,602 JBrowse link
G Ubac2 UBA domain containing 2 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955404:11,205,972...11,357,370
Ensembl chrNW_004955404:11,205,585...11,357,370 		JBrowse link
G Ube2g2 ubiquitin conjugating enzyme E2 G2 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955407:41,683,771...41,724,014
Ensembl chrNW_004955407:41,683,720...41,724,014 		JBrowse link
G Ube2j1 ubiquitin conjugating enzyme E2 J1 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955411:16,076,647...16,091,554
Ensembl chrNW_004955411:16,074,551...16,091,570 		JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) UniProt PMID:30842217 NCBI chrNW_004955438:12,726,206...12,780,364
Ensembl chrNW_004955438:12,726,357...12,780,379 		JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pabpn1l PABPN1 like, cytoplasmic acts_upstream_of_or_within ISO (MGI:6509513|PMID:32558204) MGI PMID:32558204 MGI:6509513 NCBI chrNW_004955541:2,718,076...2,720,322
Ensembl chrNW_004955541:2,718,076...2,720,322 		JBrowse link
G Styx serine/threonine/tyrosine interacting protein involved_in ISO (PMID:28007894) UniProt PMID:28007894 NCBI chrNW_004955409:10,428,556...10,445,384
Ensembl chrNW_004955409:10,428,556...10,445,880 		JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A acts_upstream_of_or_within ISO (MGI:4461099|PMID:20100865) MGI PMID:20100865 MGI:4461099 NCBI chrNW_004955437:2,916,598...3,070,771
Ensembl chrNW_004955437:2,916,598...3,070,771 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955597:326,601...397,112 JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955433:15,677,788...15,718,894
Ensembl chrNW_004955433:15,674,116...15,718,894 		JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24904118) BHF-UCL PMID:24904118 NCBI chrNW_004955483:933,269...941,070
Ensembl chrNW_004955483:932,352...941,143 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:21628596) FlyBase PMID:21628596 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844 		JBrowse link
G Pdcl3 phosducin like 3 acts_upstream_of_or_within ISO (PMID:23792958) MGI PMID:23792958 NCBI chrNW_004955470:6,553,450...6,563,814 JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:15195100) UniProt PMID:15195100 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 involved_in ISO (MGI:5688415|PMID:26070566) UniProt PMID:26070566 MGI:5688415 NCBI chrNW_004955435:10,816,787...10,818,047
Ensembl chrNW_004955435:10,816,831...10,817,961 		JBrowse link
G Psen1 presenilin 1 involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737 		JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234 		JBrowse link
G Qrich2 glutamine rich 2 involved_in ISO (PMID:30683861)
(MGI:6277293|PMID:30683861)		 UniProt PMID:30683861 MGI:6277293 NCBI chrNW_004955506:5,990,070...6,015,808 JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004955452:3,626,609...3,630,911
Ensembl chrNW_004955452:3,626,609...3,633,209 		JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO (PMID:15314173) CAFA PMID:15314173 NCBI chrNW_004955451:13,892,880...13,898,079
Ensembl chrNW_004955451:13,892,880...13,898,079 		JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004955423:1,748,809...1,758,622
Ensembl chrNW_004955423:1,748,809...1,758,622 		JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO (PMID:17310983) CAFA PMID:17310983 NCBI chrNW_004955487:3,793,168...3,798,007
Ensembl chrNW_004955487:3,792,870...3,798,153 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23129660) UniProt PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:4355593 NCBI chrNW_004955485:7,805,244...7,925,414
Ensembl chrNW_004955485:7,808,131...7,925,677 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chrNW_004955475:10,930,175...11,006,876
Ensembl chrNW_004955475:10,930,192...11,005,724 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:3628833 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167 		JBrowse link
nuclear histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssb small RNA binding exonuclease protection factor La involved_in ISO (PMID:9154801) CAFA PMID:9154801 NCBI chrNW_004955449:4,806,468...4,815,175 JBrowse link
nuclear mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dxo decapping exoribonuclease involved_in ISO (MGI:5488528|PMID:23523372) UniProt PMID:23523372 MGI:5488528 NCBI chrNW_004955437:482,866...484,989
Ensembl chrNW_004955437:481,554...484,989 		JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:17545563)
(PMID:17545563), (PMID:20699273)		 UniProt PMID:17545563 PMID:20699273 NCBI chrNW_004955486:2,601,362...2,626,451
Ensembl chrNW_004955486:2,601,322...2,626,876 		JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955454:2,732,308...2,734,398
Ensembl chrNW_004955454:2,732,308...2,734,398 		JBrowse link
G Exosc9 exosome component 9 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955428:18,732,733...18,743,743
Ensembl chrNW_004955428:18,731,919...18,743,756 		JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955508:3,441,540...3,561,896
Ensembl chrNW_004955508:3,441,683...3,561,805 		JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:16934922) UniProt PMID:16934922 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992 		JBrowse link
nuclear polyadenylation-dependent rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc10 exosome component 10 involved_in ISO (PMID:16455498) UniProt PMID:16455498 NCBI chrNW_004955486:2,601,362...2,626,451
Ensembl chrNW_004955486:2,601,322...2,626,876 		JBrowse link
G Exosc9 exosome component 9 involved_in ISO (PMID:16455498) UniProt PMID:16455498 NCBI chrNW_004955428:18,732,733...18,743,743
Ensembl chrNW_004955428:18,731,919...18,743,756 		JBrowse link
nuclear protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin2 akirin 2 acts_upstream_of_positive_effect ISO (PMID:34711951) UniProt PMID:34711951 NCBI chrNW_004955411:14,600,106...14,619,374
Ensembl chrNW_004955411:14,600,106...14,619,069 		JBrowse link
G Cul3 cullin 3 involved_in ISO (PMID:27561354) UniProt PMID:27561354 NCBI chrNW_004955453:9,546,554...9,629,976
Ensembl chrNW_004955453:9,564,522...9,629,976 		JBrowse link
G Klhl15 kelch like family member 15 involved_in ISO (PMID:27561354) UniProt PMID:27561354 NCBI chrNW_004955509:4,377,975...4,439,287
Ensembl chrNW_004955509:4,375,240...4,439,287 		JBrowse link
nuclear RNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdr82 WD repeat domain 82 involved_in ISO (PMID:33913806)
(MGI:6867107|PMID:33767452)		 UniProt PMID:33767452 PMID:33913806 MGI:6867107 NCBI chrNW_004955532:3,860,785...3,880,714
Ensembl chrNW_004955532:3,863,492...3,880,713 		JBrowse link
G Zc3h4 zinc finger CCCH-type containing 4 involved_in ISO (PMID:33913806)
(MGI:6867107|PMID:33767452)		 UniProt PMID:33767452 PMID:33913806 MGI:6867107 NCBI chrNW_004955574:1,029,343...1,069,412
Ensembl chrNW_004955574:1,029,438...1,067,225 		JBrowse link
nuclear-transcribed mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chrNW_004955452:13,935,028...13,967,281
Ensembl chrNW_004955452:13,934,346...13,968,624 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:23788676) UniProt PMID:23788676 NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358 		JBrowse link
G Dhx34 DExH-box helicase 34 involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chrNW_004955574:1,248,058...1,267,399
Ensembl chrNW_004955574:1,248,021...1,267,399 		JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955486:2,601,362...2,626,451
Ensembl chrNW_004955486:2,601,322...2,626,876 		JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955454:2,732,308...2,734,398
Ensembl chrNW_004955454:2,732,308...2,734,398 		JBrowse link
G Exosc9 exosome component 9 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955428:18,732,733...18,743,743
Ensembl chrNW_004955428:18,731,919...18,743,756 		JBrowse link
G Nbas NBAS subunit of NRZ tethering complex involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chrNW_004955487:8,894,403...9,073,535
Ensembl chrNW_004955487:8,894,187...9,073,663 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:15039777 RGD:10045958 NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:25026078)
(MGI:4819285|PMID:20639877)		 UniProt
BHF-UCL		 PMID:20639877 PMID:25026078 MGI:4819285 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO (PMID:20123736) UniProt PMID:20123736 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176 		JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955508:3,441,540...3,561,896
Ensembl chrNW_004955508:3,441,683...3,561,805 		JBrowse link
nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Skic2 SKI2 subunit of superkiller complex involved_in ISO (PMID:32006463), (PMID:35120588) UniProt PMID:32006463 PMID:35120588 NCBI chrNW_004955437:473,192...482,811
Ensembl chrNW_004955437:473,192...482,811 		JBrowse link
G Skic3 SKI3 subunit of superkiller complex involved_in ISO (PMID:32006463), (PMID:35120588) UniProt PMID:32006463 PMID:35120588 NCBI chrNW_004955418:16,989,400...17,068,479
Ensembl chrNW_004955418:16,989,400...17,069,441 		JBrowse link
G Skic8 SKI8 subunit of superkiller complex involved_in ISO (PMID:32006463), (PMID:35120588) UniProt PMID:32006463 PMID:35120588 NCBI chrNW_004955450:771,646...788,895
Ensembl chrNW_004955450:770,750...789,485 		JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6l CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chrNW_004955433:2,206,462...2,290,773
Ensembl chrNW_004955433:2,213,444...2,316,049 		JBrowse link
G Pabpn1l PABPN1 like, cytoplasmic acts_upstream_of_or_within ISO (MGI:6509513|PMID:32558204) MGI PMID:32558204 MGI:6509513 NCBI chrNW_004955541:2,718,076...2,720,322
Ensembl chrNW_004955541:2,718,076...2,720,322 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:21245038) UniProt PMID:21245038 NCBI chrNW_004955430:7,272,911...7,277,726
Ensembl chrNW_004955430:7,272,765...7,277,726 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) UniProt PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within		 ISO (PMID:23644599)
(MGI:3589099|PMID:15814898)		 UniProt
MGI		 PMID:15814898 PMID:23644599 MGI:3589099 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 acts_upstream_of_or_within ISO (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 acts_upstream_of_or_within ISO (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-independent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:11279239) UniProt PMID:11279239 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO PMID:11279239 UniProt PMID:11279239 RGD:11344953 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
nuclear-transcribed mRNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 involved_in ISO (PMID:23756462) UniProt PMID:23756462 NCBI chrNW_004955453:3,558,744...3,851,222
Ensembl chrNW_004955453:3,559,067...3,830,064 		JBrowse link
nuclear-transcribed mRNA catabolic process, no-go decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex subunit 6 involved_in ISO (PMID:15314026) UniProt PMID:15314026 NCBI chrNW_004955408:170,399...239,492
Ensembl chrNW_004955408:170,399...218,040 		JBrowse link
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:15314026) UniProt PMID:15314026 NCBI chrNW_004955435:18,009,228...18,050,329
Ensembl chrNW_004955435:18,008,352...18,050,329 		JBrowse link
G Gtpbp2 GTP binding protein 2 acts_upstream_of_or_within ISO (MGI:5574482|PMID:25061210) MGI PMID:25061210 MGI:5574482 NCBI chrNW_004955437:9,414,128...9,425,671
Ensembl chrNW_004955437:9,412,934...9,424,365 		JBrowse link
G Hbs1l HBS1 like translational GTPase involved_in ISO (PMID:23667253), (PMID:27863242) UniProt PMID:23667253 PMID:27863242 NCBI chrNW_004955439:1,684,466...1,762,314
Ensembl chrNW_004955439:1,683,685...1,762,314 		JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in ISO (PMID:23667253), (PMID:27543824), (PMID:27863242) UniProt PMID:23667253 PMID:27543824 PMID:27863242 NCBI chrNW_004955446:14,564,366...14,566,178
Ensembl chrNW_004955446:14,564,366...14,566,178 		JBrowse link
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay