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ONTOLOGY REPORT - ANNOTATIONS


Term:catabolic process
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Accession:GO:0009056 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism.
Synonyms:exact_synonym: breakdown;   catabolism;   degradation
 narrow_synonym: multicellular organismal catabolic process
 related_synonym: single-organism catabolic process
 alt_id: GO:0044243;   GO:0044712
 xref: Wikipedia:Catabolism


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catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tmem150a transmembrane protein 150A JBrowse link NW_004955424 1,903,065 1,907,046 RGD:9068941
2-oxobutyrate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Phyh phytanoyl-CoA 2-hydroxylase JBrowse link NW_004955462 1,238,622 1,250,731 RGD:9068941
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 JBrowse link NW_004955425 1,032,446 1,224,300 RGD:9068941
G Dhx36 DEAH-box helicase 36 JBrowse link NW_004955448 5,634,072 5,676,272 RGD:9068941
G Dnd1 DND microRNA-mediated repression inhibitor 1 JBrowse link NW_004955418 30,795 33,394 RGD:9068941
G Hnrnpd heterogeneous nuclear ribonucleoprotein D JBrowse link NW_004955433 6,452,931 6,470,209 RGD:9068941
G Khsrp KH-type splicing regulatory protein JBrowse link NW_004955495 3,183,083 3,194,356 RGD:9068941
G Mov10 Mov10 RISC complex RNA helicase JBrowse link NW_004955435 16,093,471 16,114,735 RGD:9068941
G Plekhn1 pleckstrin homology domain containing N1 JBrowse link NW_004955486 9,736,801 9,744,659 RGD:9068941
G Qki QKI, KH domain containing RNA binding JBrowse link NW_004955439 17,925,205 18,079,727 RGD:9068941
G Rbm24 RNA binding motif protein 24 JBrowse link NW_004955483 8,705,533 8,716,772 RGD:9068941
G Rc3h1 ring finger and CCCH-type domains 1 JBrowse link NW_004955406 14,053,122 14,123,023 RGD:9068941
G Tardbp TAR DNA binding protein JBrowse link NW_004955486 2,656,121 2,674,808 RGD:9068941
G Trim71 tripartite motif containing 71 JBrowse link NW_004955421 97,130 174,326 RGD:9068941
G Upf1 UPF1 RNA helicase and ATPase JBrowse link NW_004955524 2,798,336 2,814,063 RGD:9068941
G Zc3h12a zinc finger CCCH-type containing 12A JBrowse link NW_004955452 15,306,398 15,314,959 RGD:9068941
G Zc3h12d zinc finger CCCH-type containing 12D JBrowse link NW_004955439 11,761,099 11,787,508 RGD:9068941
G Zfp36 ZFP36 ring finger protein JBrowse link NW_004955468 152,744 155,140 RGD:9068941
G Zfp36l1 ZFP36 ring finger protein like 1 JBrowse link NW_004955466 1,541,367 1,546,617 RGD:9068941
G Zfp36l2 ZFP36 ring finger protein like 2 JBrowse link NW_004955441 10,467,608 10,469,885 RGD:9068941
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Angel2 angel homolog 2 JBrowse link NW_004955406 4,589,849 4,606,380 RGD:9068941
G Elavl1 ELAV like RNA binding protein 1 JBrowse link NW_004955563 1,283,424 1,315,283 RGD:9068941
G Elavl4 ELAV like RNA binding protein 4 JBrowse link NW_004955464 8,699,142 8,847,289 RGD:9068941
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 JBrowse link NW_004955408 32,718,736 32,719,409 RGD:9068941
G Hnrnpc heterogeneous nuclear ribonucleoprotein C JBrowse link NW_004955550 1,949,975 2,002,297 RGD:9068941
G Mapkapk2 MAPK activated protein kinase 2 JBrowse link NW_004955406 42,231,858 42,276,477 RGD:9068941
G Myd88 MYD88 innate immune signal transduction adaptor JBrowse link NW_004955427 25,553,589 25,557,654 RGD:9068941
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link NW_004955495 6,990,565 7,002,492 RGD:9068941
G Rbm10 RNA binding motif protein 10 JBrowse link NW_004955516 904,852 934,313 RGD:9068941
G Rbm38 RNA binding motif protein 38 JBrowse link NW_004955445 2,036,314 2,050,882 RGD:9068941
G Tardbp TAR DNA binding protein JBrowse link NW_004955486 2,656,121 2,674,808 RGD:9068941
G Tirap TIR domain containing adaptor protein JBrowse link NW_004955412 27,303,548 27,315,031 RGD:9068941
G Zfp36 ZFP36 ring finger protein JBrowse link NW_004955468 152,744 155,140 RGD:9068941
4-hydroxyproline catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 JBrowse link NW_004955507 3,687,449 3,711,939 RGD:9068941
5-methylcytosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tet2 tet methylcytosine dioxygenase 2 JBrowse link NW_004955496 3,885,684 3,963,056 RGD:9068941
acetyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link NW_004955412 10,350,088 10,369,806 RGD:9068941
G Nudt7 nudix hydrolase 7 JBrowse link NW_004955522 945,186 960,094 RGD:9068941
acetylcholine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ache acetylcholinesterase (Cartwright blood group) JBrowse link NW_004955573 79,606 85,799 RGD:9068941
acrosome matrix dispersal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acr acrosin JBrowse link NW_004955413 33,721,984 33,728,088 RGD:9068941
acylglycerol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd12 abhydrolase domain containing 12, lysophospholipase JBrowse link NW_004955415 31,284,947 31,337,703 RGD:9068941
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase JBrowse link NW_004955416 15,878,972 15,983,322 RGD:9068941
G Abhd6 abhydrolase domain containing 6, acylglycerol lipase JBrowse link NW_004955430 1,809,969 1,861,441 RGD:9068941
G Lypla2 lysophospholipase 2 JBrowse link NW_004955452 3,710,818 3,715,047 RGD:9068941
G Mgll monoglyceride lipase JBrowse link NW_004955429 15,760,159 15,960,774 RGD:9068941
adenosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ada adenosine deaminase JBrowse link NW_004955445 12,696,096 12,717,488 RGD:9068941
G Ada2 adenosine deaminase 2 JBrowse link NW_004955454 5,341,822 5,355,383 RGD:9068941
ADP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt9 nudix hydrolase 9 JBrowse link NW_004955474 2,402,400 2,438,145 RGD:9068941
aflatoxin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nfe2l2 nuclear factor, erythroid 2 like 2 JBrowse link NW_004955403 19,510,122 19,536,428 RGD:9068941
aggrephagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acbd5 acyl-CoA binding domain containing 5 JBrowse link NW_004955429 2,623,042 2,661,182 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Map1lc3c microtubule associated protein 1 light chain 3 gamma JBrowse link NW_004955406 5,769,894 5,774,806 RGD:9068941
G Sqstm1 sequestosome 1 JBrowse link NW_004955408 757,426 764,989 RGD:9068941
G Ubqln1 ubiquilin 1 JBrowse link NW_004955432 3,575,034 3,617,029 RGD:9068941
G Wdfy3 WD repeat and FYVE domain containing 3 JBrowse link NW_004955474 4,764,902 5,045,421 RGD:9068941
G Wdr81 WD repeat domain 81 JBrowse link NW_004955481 1,450,127 1,462,564 RGD:9068941
aldehyde catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1a1 aldo-keto reductase family 1 member A1 JBrowse link NW_004955464 12,715,238 12,729,034 RGD:9068941
G Aldh3b1 aldehyde dehydrogenase 3 family member B1 JBrowse link NW_004955422 17,786,495 17,801,014 RGD:9068941
AMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nt5e 5'-nucleotidase ecto JBrowse link NW_004955411 12,891,236 12,946,324 RGD:9068941
amyloid-beta clearance by cellular catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca7 ATP binding cassette subfamily A member 7 JBrowse link NW_004955495 6,818,002 6,838,177 RGD:9068941
G Cd36 CD36 molecule JBrowse link NW_004955410 5,003,720 5,120,903 RGD:9068941
G Ide insulin degrading enzyme JBrowse link NW_004955425 819,461 926,440 RGD:9068941
G Ldlr low density lipoprotein receptor JBrowse link NW_004955495 2,114,702 2,135,584 RGD:9068941
G Lrp1 LDL receptor related protein 1 JBrowse link NW_004955458 4,861,431 4,941,939 RGD:9068941
G Lrp4 LDL receptor related protein 4 JBrowse link NW_004955422 1,191,338 1,238,227 RGD:9068941
G Mme membrane metalloendopeptidase JBrowse link NW_004955448 6,193,113 6,311,666 RGD:9068941
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdc20 cell division cycle 20 JBrowse link NW_004955537 2,941,265 2,945,158 RGD:9068941
G Cul3 cullin 3 JBrowse link NW_004955453 9,546,554 9,629,976 RGD:9068941
G Ecrg4 ECRG4 augurin precursor JBrowse link NW_004955470 10,646,585 10,655,311 RGD:9068941
G Fbxo31 F-box protein 31 JBrowse link NW_004955541 1,811,010 1,828,734 RGD:9068941
G Fzr1 fizzy and cell division cycle 20 related 1 JBrowse link NW_004955495 5,481,914 5,503,690 RGD:9068941
G Ube2c ubiquitin conjugating enzyme E2 C JBrowse link NW_004955445 11,474,826 11,479,479 RGD:9068941
G Ube2s ubiquitin conjugating enzyme E2 S JBrowse link NW_004955567 854,518 859,606 RGD:9068941
androgen catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hsd17b11 hydroxysteroid 17-beta dehydrogenase 11 JBrowse link NW_004955474 2,477,670 2,510,424 RGD:9068941
G LOC102023780 aromatase JBrowse link NW_004955409 3,198,622 3,313,072 RGD:9068941
G Spp1 secreted phosphoprotein 1 JBrowse link NW_004955474 1,914,477 1,922,025 RGD:9068941
G Srd5a1 steroid 5 alpha-reductase 1 JBrowse link NW_004955504 4,360,909 4,388,964 RGD:9068941
apoptotic DNA fragmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dffb DNA fragmentation factor subunit beta JBrowse link NW_004955486 7,836,013 7,849,875 RGD:9068941
G Dnase1l3 deoxyribonuclease 1 like 3 JBrowse link NW_004955430 7,867,172 7,892,079 RGD:9068941
G Endog endonuclease G JBrowse link NW_004955570 1,200,461 1,203,566 RGD:9068941
G Foxl2 forkhead box L2 JBrowse link NW_004955501 83,965 84,476 RGD:9068941
arginine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddah1 dimethylarginine dimethylaminohydrolase 1 JBrowse link NW_004955423 8,637,116 8,673,881 RGD:9068941
G Fah fumarylacetoacetate hydrolase JBrowse link NW_004955533 904,294 921,730 RGD:9068941
G Nos1 nitric oxide synthase 1 JBrowse link NW_004955455 13,797,557 13,978,402 RGD:9068941
G Nos2 nitric oxide synthase 2 JBrowse link NW_004955481 5,197,957 5,232,406 RGD:9068941
G Nos3 nitric oxide synthase 3 JBrowse link NW_004955491 5,438,228 5,457,308 RGD:9068941
arginine catabolic process to ornithine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arg1 arginase 1 JBrowse link NW_004955436 12,235,767 12,247,817 RGD:9068941
G Arg2 arginase 2 JBrowse link NW_004955466 2,549,557 2,577,060 RGD:9068941
aromatic compound catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pon1 paraoxonase 1 JBrowse link NW_004955432 11,893,473 11,923,035 RGD:9068941
G Pon2 paraoxonase 2 JBrowse link NW_004955432 11,988,009 12,020,702 RGD:9068941
G Pon3 paraoxonase 3 JBrowse link NW_004955432 11,945,383 11,983,417 RGD:9068941
aspartate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddo D-aspartate oxidase JBrowse link NW_004955411 35,142,415 35,163,234 RGD:9068941
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link NW_004955507 5,346,937 5,370,072 RGD:9068941
G Got2 glutamic-oxaloacetic transaminase 2 JBrowse link NW_004955433 16,121,795 16,145,129 RGD:9068941
autophagosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link NW_004955422 1,455,392 1,644,368 RGD:9068941
G Atg101 autophagy related 101 JBrowse link NW_004955547 2,436,974 2,446,849 RGD:9068941
G Atg12 autophagy related 12 JBrowse link NW_004955408 35,607,541 35,620,878 RGD:9068941
G Atg13 autophagy related 13 JBrowse link NW_004955422 1,398,646 1,432,440 RGD:9068941
G Atg14 autophagy related 14 JBrowse link NW_004955466 13,898,311 13,972,506 RGD:9068941
G Atg16l2 autophagy related 16 like 2 JBrowse link NW_004955414 18,600,904 18,618,048 RGD:9068941
G Atg2a autophagy related 2A JBrowse link NW_004955422 20,261,749 20,290,879 RGD:9068941
G Atg3 autophagy related 3 JBrowse link NW_004955427 12,881,454 12,906,399 RGD:9068941
G Atg4b autophagy related 4B cysteine peptidase JBrowse link NW_004955542 164,969 192,498 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Atg9a autophagy related 9A JBrowse link NW_004955453 14,203,798 14,214,760 RGD:9068941
G Atg9b autophagy related 9B JBrowse link NW_004955491 5,458,152 5,467,260 RGD:9068941
G Bag3 BAG cochaperone 3 JBrowse link NW_004955551 446,322 468,329 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Ctsd cathepsin D JBrowse link NW_004955422 13,576,315 13,584,267 RGD:9068941
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 JBrowse link NW_004955435 12,531,651 12,626,969 RGD:9068941
G Emc6 ER membrane protein complex subunit 6 JBrowse link NW_004955467 13,144,659 13,146,434 RGD:9068941
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link NW_004955436 14,925,452 14,982,357 RGD:9068941
G Irgm immunity related GTPase M JBrowse link NW_004955408 2,338,510 2,344,566 RGD:9068941
G Map1lc3a microtubule associated protein 1 light chain 3 alpha JBrowse link NW_004955422 26,774,466 26,776,024 RGD:9068941
G Pacs2 phosphofurin acidic cluster sorting protein 2 JBrowse link NW_004955538 3,559,738 3,616,862 RGD:9068941
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 JBrowse link NW_004955402 28,081,150 28,195,305 RGD:9068941
G Psen1 presenilin 1 JBrowse link NW_004955523 2,128,529 2,210,737 RGD:9068941
G Rab1a RAB1A, member RAS oncogene family JBrowse link NW_004955424 19,393,589 19,421,373 RGD:9068941
G Rab23 RAB23, member RAS oncogene family JBrowse link NW_004955502 2,947,170 2,980,634 RGD:9068941
G Rab33b RAB33B, member RAS oncogene family JBrowse link NW_004955428 4,192,357 4,211,740 RGD:9068941
G Rab7a RAB7A, member RAS oncogene family JBrowse link NW_004955429 15,103,792 15,167,498 RGD:9068941
G Rb1cc1 RB1 inducible coiled-coil 1 JBrowse link NW_004955454 12,201,566 12,257,383 RGD:9068941
G Rufy4 RUN and FYVE domain containing 4 JBrowse link NW_004955453 15,243,125 15,259,086 RGD:9068941
G Sting1 stimulator of interferon response cGAMP interactor 1 JBrowse link NW_004955418 1,091,022 1,097,064 RGD:9068941
G Stx12 syntaxin 12 JBrowse link NW_004955452 6,977,813 7,015,281 RGD:9068941
G Synpo2 synaptopodin 2 JBrowse link NW_004955428 21,152,210 21,323,254 RGD:9068941
G Tmem41b transmembrane protein 41B JBrowse link NW_004955414 25,063,497 25,082,901 RGD:9068941
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 JBrowse link NW_004955422 26,640,239 26,649,291 RGD:9068941
G Ubqln1 ubiquilin 1 JBrowse link NW_004955432 3,575,034 3,617,029 RGD:9068941
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link NW_004955482 760,200 777,133 RGD:9068941
G Vmp1 vacuole membrane protein 1 JBrowse link NW_004955451 3,265,109 3,370,610 RGD:9068941
G Wdr45 WD repeat domain 45 JBrowse link NW_004955543 597,796 604,163 RGD:9068941
G Wdr45b WD repeat domain 45B JBrowse link NW_004955506 515,364 556,507 RGD:9068941
G Wipi1 WD repeat domain, phosphoinositide interacting 1 JBrowse link NW_004955478 4,309,975 4,341,107 RGD:9068941
G Wipi2 WD repeat domain, phosphoinositide interacting 2 JBrowse link NW_004955460 10,090,343 10,132,724 RGD:9068941
autophagosome maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link NW_004955493 6,696,520 6,707,849 RGD:9068941
G Epg5 ectopic P-granules autophagy protein 5 homolog JBrowse link NW_004955402 31,422,848 31,532,189 RGD:9068941
G Lamp2 lysosomal associated membrane protein 2 JBrowse link NW_004955572 1,423,048 1,464,443 RGD:9068941
G Map1lc3a microtubule associated protein 1 light chain 3 alpha JBrowse link NW_004955422 26,774,466 26,776,024 RGD:9068941
G Map1lc3b microtubule associated protein 1 light chain 3 beta JBrowse link NW_004955541 1,852,388 1,868,194 RGD:9068941
G Map1lc3c microtubule associated protein 1 light chain 3 gamma JBrowse link NW_004955406 5,769,894 5,774,806 RGD:9068941
G Mcoln1 mucolipin 1 JBrowse link NW_004955563 1,703,408 1,712,908 RGD:9068941
G Mfsd8 major facilitator superfamily domain containing 8 JBrowse link NW_004955428 13,519,285 13,548,007 RGD:9068941
G Rubcnl rubicon like autophagy enhancer JBrowse link NW_004955431 140,999 206,570 RGD:9068941
G Snap29 synaptosome associated protein 29 JBrowse link NW_004955442 19,419,381 19,446,782 RGD:9068941
G Snapin SNAP associated protein JBrowse link NW_004955545 306,546 308,229 RGD:9068941
G Snx14 sorting nexin 14 JBrowse link NW_004955411 12,967,980 13,048,839 RGD:9068941
G Stx17 syntaxin 17 JBrowse link NW_004955419 25,674,771 25,741,357 RGD:9068941
G Tecpr1 tectonin beta-propeller repeat containing 1 JBrowse link NW_004955460 14,106,711 14,137,983 RGD:9068941
G Ubqln1 ubiquilin 1 JBrowse link NW_004955432 3,575,034 3,617,029 RGD:9068941
G Uvrag UV radiation resistance associated JBrowse link NW_004955414 15,733,116 16,043,555 RGD:9068941
G Vamp7 vesicle associated membrane protein 7 JBrowse link NW_004955594 20,496 72,648 RGD:9068941
G Vamp8 vesicle associated membrane protein 8 JBrowse link NW_004955424 1,922,830 1,926,844 RGD:9068941
G Vcp valosin containing protein JBrowse link NW_004955472 1,111,649 1,124,076 RGD:9068941
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog JBrowse link NW_004955438 1,320,862 1,351,344 RGD:9068941
G Vps16 VPS16 core subunit of CORVET and HOPS complexes JBrowse link NW_004955415 13,791,611 13,813,500 RGD:9068941
G Vps33a VPS33A core subunit of CORVET and HOPS complexes JBrowse link NW_004955482 6,333,282 6,352,369 RGD:9068941
G Vps33b VPS33B late endosome and lysosome associated JBrowse link NW_004955416 15,049,849 15,071,108 RGD:9068941
G Vti1b vesicle transport through interaction with t-SNAREs 1B JBrowse link NW_004955466 2,527,750 2,549,599 RGD:9068941
G Wipi2 WD repeat domain, phosphoinositide interacting 2 JBrowse link NW_004955460 10,090,343 10,132,724 RGD:9068941
autophagosome membrane docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg14 autophagy related 14 JBrowse link NW_004955466 13,898,311 13,972,506 RGD:9068941
G Snap29 synaptosome associated protein 29 JBrowse link NW_004955442 19,419,381 19,446,782 RGD:9068941
G Stx17 syntaxin 17 JBrowse link NW_004955419 25,674,771 25,741,357 RGD:9068941
G Vamp8 vesicle associated membrane protein 8 JBrowse link NW_004955424 1,922,830 1,926,844 RGD:9068941
autophagosome organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp13a2 ATPase cation transporting 13A2 JBrowse link NW_004955527 1,805,854 1,823,623 RGD:9068941
G Gba glucosylceramidase beta JBrowse link NW_004955545 1,682,097 1,689,373 RGD:9068941
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha JBrowse link NW_004955414 31,896,161 31,999,730 RGD:9068941
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta JBrowse link NW_004955406 40,247,690 40,317,556 RGD:9068941
autophagosome-endosome fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rubcnl rubicon like autophagy enhancer JBrowse link NW_004955431 140,999 206,570 RGD:9068941
autophagosome-lysosome fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp13a2 ATPase cation transporting 13A2 JBrowse link NW_004955527 1,805,854 1,823,623 RGD:9068941
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link NW_004955493 6,696,520 6,707,849 RGD:9068941
G Rubcnl rubicon like autophagy enhancer JBrowse link NW_004955431 140,999 206,570 RGD:9068941
autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link NW_004955422 1,455,392 1,644,368 RGD:9068941
G Anxa7 annexin A7 JBrowse link NW_004955437 18,394,371 18,421,779 RGD:9068941
G Arsa arylsulfatase A JBrowse link NW_004955413 33,624,460 33,629,491 RGD:9068941
G Arsb arylsulfatase B JBrowse link NW_004955425 22,120,507 22,281,221 RGD:9068941
G Atg10 autophagy related 10 JBrowse link NW_004955418 28,118,843 28,368,358 RGD:9068941
G Atg12 autophagy related 12 JBrowse link NW_004955408 35,607,541 35,620,878 RGD:9068941
G Atg14 autophagy related 14 JBrowse link NW_004955466 13,898,311 13,972,506 RGD:9068941
G Atg16l2 autophagy related 16 like 2 JBrowse link NW_004955414 18,600,904 18,618,048 RGD:9068941
G Atg3 autophagy related 3 JBrowse link NW_004955427 12,881,454 12,906,399 RGD:9068941
G Atg4b autophagy related 4B cysteine peptidase JBrowse link NW_004955542 164,969 192,498 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Atg9a autophagy related 9A JBrowse link NW_004955453 14,203,798 14,214,760 RGD:9068941
G Atp13a2 ATPase cation transporting 13A2 JBrowse link NW_004955527 1,805,854 1,823,623 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G C9orf72 C9orf72-SMCR8 complex subunit JBrowse link NW_004955472 7,299,092 7,337,591 RGD:9068941
G Chmp4b charged multivesicular body protein 4B JBrowse link NW_004955422 27,482,239 27,526,798 RGD:9068941
G Ctsb cathepsin B JBrowse link NW_004955403 53,086,236 53,100,217 RGD:9068941
G Drd2 dopamine receptor D2 JBrowse link NW_004955412 15,054,255 15,114,558 RGD:9068941
G Drd3 dopamine receptor D3 JBrowse link NW_004955427 14,219,519 14,252,178 RGD:9068941
G Ei24 EI24 autophagy associated transmembrane protein JBrowse link NW_004955412 26,574,814 26,586,154 RGD:9068941
G Epg5 ectopic P-granules autophagy protein 5 homolog JBrowse link NW_004955402 31,422,848 31,532,189 RGD:9068941
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link NW_004955436 14,925,452 14,982,357 RGD:9068941
G Gba glucosylceramidase beta JBrowse link NW_004955545 1,682,097 1,689,373 RGD:9068941
G Itgb4 integrin subunit beta 4 JBrowse link NW_004955506 6,493,466 6,526,778 RGD:9068941
G Lamp2 lysosomal associated membrane protein 2 JBrowse link NW_004955572 1,423,048 1,464,443 RGD:9068941
G LOC102011427 chromosome unknown open reading frame, human C19orf12 JBrowse link NW_004955468 7,903,438 7,914,038 RGD:9068941
G Map1lc3a microtubule associated protein 1 light chain 3 alpha JBrowse link NW_004955422 26,774,466 26,776,024 RGD:9068941
G Map1lc3b microtubule associated protein 1 light chain 3 beta JBrowse link NW_004955541 1,852,388 1,868,194 RGD:9068941
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 JBrowse link NW_004955483 8,078,796 8,079,612 RGD:9068941
G Npc1 NPC intracellular cholesterol transporter 1 JBrowse link NW_004955402 11,699,434 11,742,899 RGD:9068941
G Nrbf2 nuclear receptor binding factor 2 JBrowse link NW_004955425 16,330,115 16,336,798 RGD:9068941
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 JBrowse link NW_004955402 28,081,150 28,195,305 RGD:9068941
G Pmp22 peripheral myelin protein 22 JBrowse link NW_004955467 2,422,181 2,456,925 RGD:9068941
G Psen1 presenilin 1 JBrowse link NW_004955523 2,128,529 2,210,737 RGD:9068941
G Rab1a RAB1A, member RAS oncogene family JBrowse link NW_004955424 19,393,589 19,421,373 RGD:9068941
G Rb1cc1 RB1 inducible coiled-coil 1 JBrowse link NW_004955454 12,201,566 12,257,383 RGD:9068941
G S100a9 S100 calcium binding protein A9 JBrowse link NW_004955592 90,647 93,842 RGD:9068941
G Sqstm1 sequestosome 1 JBrowse link NW_004955408 757,426 764,989 RGD:9068941
G Srpx sushi repeat containing protein X-linked JBrowse link NW_004955601 286,092 364,235 RGD:9068941
G Syt11 synaptotagmin 11 JBrowse link NW_004955545 2,054,720 2,074,526 RGD:9068941
G Tbc1d5 TBC1 domain family member 5 JBrowse link NW_004955430 9,411,865 9,966,710 RGD:9068941
G Tecpr1 tectonin beta-propeller repeat containing 1 JBrowse link NW_004955460 14,106,711 14,137,983 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
G Trappc4 trafficking protein particle complex 4 JBrowse link NW_004955412 20,129,154 20,133,043 RGD:9068941
G Trim17 tripartite motif containing 17 JBrowse link NW_004955581 107,251 113,907 RGD:9068941
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link NW_004955482 760,200 777,133 RGD:9068941
G Ulk2 unc-51 like autophagy activating kinase 2 JBrowse link NW_004955467 818,975 894,103 RGD:9068941
G Umod uromodulin JBrowse link NW_004955442 3,986,936 4,001,155 RGD:9068941
G Uvrag UV radiation resistance associated JBrowse link NW_004955414 15,733,116 16,043,555 RGD:9068941
G Vcp valosin containing protein JBrowse link NW_004955472 1,111,649 1,124,076 RGD:9068941
G Vmp1 vacuole membrane protein 1 JBrowse link NW_004955451 3,265,109 3,370,610 RGD:9068941
G Vps13a vacuolar protein sorting 13 homolog A JBrowse link NW_004955512 2,037,803 2,267,197 RGD:9068941
G Vps39 VPS39 subunit of HOPS complex JBrowse link NW_004955416 8,893,249 8,936,351 RGD:9068941
G Vps51 VPS51 subunit of GARP complex JBrowse link NW_004955422 20,091,682 20,102,371 RGD:9068941
G Vti1a vesicle transport through interaction with t-SNAREs 1A JBrowse link NW_004955431 17,542,605 17,910,809 RGD:9068941
G Wdr45 WD repeat domain 45 JBrowse link NW_004955543 597,796 604,163 RGD:9068941
G Wipi1 WD repeat domain, phosphoinositide interacting 1 JBrowse link NW_004955478 4,309,975 4,341,107 RGD:9068941
autophagy of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link NW_004955422 1,455,392 1,644,368 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Capn10 calpain 10 JBrowse link NW_004955542 874,083 885,085 RGD:9068941
G Cisd2 CDGSH iron sulfur domain 2 JBrowse link NW_004955496 5,656,686 5,672,888 RGD:9068941
G Ctsk cathepsin K JBrowse link NW_004955588 149,036 158,093 RGD:9068941
G Fbxo7 F-box protein 7 JBrowse link NW_004955405 41,429,421 41,449,670 RGD:9068941
G Fis1 fission, mitochondrial 1 JBrowse link NW_004955456 16,057,158 16,060,623 RGD:9068941
G Fundc1 FUN14 domain containing 1 JBrowse link NW_004955516 3,648,629 3,664,032 RGD:9068941
G Map1lc3a microtubule associated protein 1 light chain 3 alpha JBrowse link NW_004955422 26,774,466 26,776,024 RGD:9068941
G Map1lc3b microtubule associated protein 1 light chain 3 beta JBrowse link NW_004955541 1,852,388 1,868,194 RGD:9068941
G Pink1 PTEN induced kinase 1 JBrowse link NW_004955452 1,171,115 1,186,338 RGD:9068941
G Ppargc1a PPARG coactivator 1 alpha JBrowse link NW_004955480 543,397 1,188,376 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Slc25a46 solute carrier family 25 member 46 JBrowse link NW_004955418 4,316,790 4,342,748 RGD:9068941
G Usp30 ubiquitin specific peptidase 30 JBrowse link NW_004955455 10,234,779 10,257,959 RGD:9068941
autophagy of peroxisome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acbd5 acyl-CoA binding domain containing 5 JBrowse link NW_004955429 2,623,042 2,661,182 RGD:9068941
beta-alanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh6a1 aldehyde dehydrogenase 6 family member A1 JBrowse link NW_004955523 1,343,545 1,369,080 RGD:9068941
beta-glucoside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gba glucosylceramidase beta JBrowse link NW_004955545 1,682,097 1,689,373 RGD:9068941
bradykinin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cpn1 carboxypeptidase N subunit 1 JBrowse link NW_004955507 5,926,508 5,952,515 RGD:9068941
G Ctsh cathepsin H JBrowse link NW_004955533 39,237 54,881 RGD:9068941
G Ece1 endothelin converting enzyme 1 JBrowse link NW_004955452 1,653,783 1,704,619 RGD:9068941
G Ide insulin degrading enzyme JBrowse link NW_004955425 819,461 926,440 RGD:9068941
G Xpnpep1 X-prolyl aminopeptidase 1 JBrowse link NW_004955485 1,436,834 1,501,408 RGD:9068941
branched-chain amino acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcat1 branched chain amino acid transaminase 1 JBrowse link NW_004955413 19,975,395 20,087,656 RGD:9068941
G Bcat2 branched chain amino acid transaminase 2 JBrowse link NW_004955559 1,785,253 1,796,838 RGD:9068941
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha JBrowse link NW_004955555 334,253 357,417 RGD:9068941
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta JBrowse link NW_004955411 8,427,875 8,626,564 RGD:9068941
G Bckdk branched chain keto acid dehydrogenase kinase JBrowse link NW_004955493 7,940,358 7,946,317 RGD:9068941
G Ivd isovaleryl-CoA dehydrogenase JBrowse link NW_004955416 7,327,557 7,341,533 RGD:9068941
G Slc25a44 solute carrier family 25 member 44 JBrowse link NW_004955545 2,347,951 2,364,935 RGD:9068941
butyrate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acads acyl-CoA dehydrogenase short chain JBrowse link NW_004955455 10,928,560 10,942,748 RGD:9068941
calcitonin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ece1 endothelin converting enzyme 1 JBrowse link NW_004955452 1,653,783 1,704,619 RGD:9068941
cAMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde4d phosphodiesterase 4D JBrowse link NW_004955446 7,914,326 9,252,527 RGD:9068941
canonical glycolysis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eno1 enolase 1 JBrowse link NW_004955486 4,275,371 4,287,152 RGD:9068941
G Eno2 enolase 2 JBrowse link NW_004955413 4,498,625 4,506,769 RGD:9068941
G Foxk1 forkhead box K1 JBrowse link NW_004955460 11,011,498 11,067,443 RGD:9068941
G Foxk2 forkhead box K2 JBrowse link NW_004955506 567,770 614,505 RGD:9068941
G Pfkm phosphofructokinase, muscle JBrowse link NW_004955500 6,979,169 7,020,375 RGD:9068941
carbohydrate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naga alpha-N-acetylgalactosaminidase JBrowse link NW_004955413 27,463,931 27,472,273 RGD:9068941
carboxylic acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pon1 paraoxonase 1 JBrowse link NW_004955432 11,893,473 11,923,035 RGD:9068941
G Pon3 paraoxonase 3 JBrowse link NW_004955432 11,945,383 11,983,417 RGD:9068941
carnitine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadl acyl-CoA dehydrogenase long chain JBrowse link NW_004955457 5,266,032 5,300,632 RGD:9068941
carotene catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bco2 beta-carotene oxygenase 2 JBrowse link NW_004955412 13,838,260 13,872,886 RGD:9068941
catabolism by host of symbiont protein term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa2 annexin A2 JBrowse link NW_004955450 14,545,586 14,574,161 RGD:9068941
catecholamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Comt catechol-O-methyltransferase JBrowse link NW_004955442 18,130,282 18,152,153 RGD:9068941
cellular amide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pm20d1 peptidase M20 domain containing 1 JBrowse link NW_004955406 41,522,800 41,544,332 RGD:9068941
cellular carbohydrate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Enosf1 enolase superfamily member 1 JBrowse link NW_004955402 9,266,198 9,297,897 RGD:9068941
cellular lipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadl acyl-CoA dehydrogenase long chain JBrowse link NW_004955457 5,266,032 5,300,632 RGD:9068941
G Lrp1 LDL receptor related protein 1 JBrowse link NW_004955458 4,861,431 4,941,939 RGD:9068941
G Pnpla2 patatin like phospholipase domain containing 2 JBrowse link NW_004955476 11,304,660 11,309,755 RGD:9068941
G Sirt2 sirtuin 2 JBrowse link NW_004955468 626,365 644,441 RGD:9068941
cellular macromolecule catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cln6 CLN6 transmembrane ER protein JBrowse link NW_004955450 7,876,572 7,885,305 RGD:9068941
G Cln8 CLN8 transmembrane ER and ERGIC protein JBrowse link NW_004955403 57,926,711 57,938,698 RGD:9068941
G Ppt1 palmitoyl-protein thioesterase 1 JBrowse link NW_004955452 17,518,345 17,549,112 RGD:9068941
cellular modified amino acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ggact gamma-glutamylamine cyclotransferase JBrowse link NW_004955404 10,280,013 10,316,531 RGD:9068941
cellular protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chek2 checkpoint kinase 2 JBrowse link NW_004955455 2,969,113 3,008,004 RGD:9068941
G Cln8 CLN8 transmembrane ER and ERGIC protein JBrowse link NW_004955403 57,926,711 57,938,698 RGD:9068941
G Dab2ip DAB2 interacting protein JBrowse link NW_004955419 6,229,437 6,416,619 RGD:9068941
G Dennd3 DENN domain containing 3 JBrowse link NW_004955454 185,299 253,935 RGD:9068941
G Htra2 HtrA serine peptidase 2 JBrowse link NW_004955424 11,255,756 11,259,170 RGD:9068941
G Ide insulin degrading enzyme JBrowse link NW_004955425 819,461 926,440 RGD:9068941
G Ppt1 palmitoyl-protein thioesterase 1 JBrowse link NW_004955452 17,518,345 17,549,112 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Rab12 RAB12, member RAS oncogene family JBrowse link NW_004955402 3,102,709 3,109,701 RGD:9068941
G Ripk1 receptor interacting serine/threonine kinase 1 JBrowse link NW_004955465 10,127,907 10,167,895 RGD:9068941
G Rnf5 ring finger protein 5 JBrowse link NW_004955437 643,133 645,528 RGD:9068941
G Siah2 siah E3 ubiquitin protein ligase 2 JBrowse link NW_004955448 1,907,478 1,926,445 RGD:9068941
G Ube2g1 ubiquitin conjugating enzyme E2 G1 JBrowse link NW_004955467 12,552,001 12,639,620 RGD:9068941
G Ube2g2 ubiquitin conjugating enzyme E2 G2 JBrowse link NW_004955407 41,683,771 41,724,014 RGD:9068941
G Ube4b ubiquitination factor E4B JBrowse link NW_004955486 3,518,873 3,626,036 RGD:9068941
ceramide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acer1 alkaline ceramidase 1 JBrowse link NW_004955495 3,247,170 3,271,417 RGD:9068941
G Acer2 alkaline ceramidase 2 JBrowse link NW_004955434 21,786,857 21,810,648 RGD:9068941
G Acer3 alkaline ceramidase 3 JBrowse link NW_004955414 14,741,027 14,846,931 RGD:9068941
G Asah1 N-acylsphingosine amidohydrolase 1 JBrowse link NW_004955552 1,623,263 1,660,285 RGD:9068941
G Asah2 N-acylsphingosine amidohydrolase 2 JBrowse link NW_004955425 5,840,355 5,931,891 RGD:9068941
G Cel carboxyl ester lipase JBrowse link NW_004955513 2,324,025 2,382,877 RGD:9068941
cGMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde1a phosphodiesterase 1A JBrowse link NW_004955403 14,906,069 15,202,710 RGD:9068941
G Pde2a phosphodiesterase 2A JBrowse link NW_004955414 18,765,591 18,826,717 RGD:9068941
G Pde5a phosphodiesterase 5A JBrowse link NW_004955428 20,785,497 20,904,717 RGD:9068941
G Pde9a phosphodiesterase 9A JBrowse link NW_004955407 39,090,718 39,165,363 RGD:9068941
chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Bag3 BAG cochaperone 3 JBrowse link NW_004955551 446,322 468,329 RGD:9068941
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link NW_004955412 23,863,513 23,867,984 RGD:9068941
G Lamp2 lysosomal associated membrane protein 2 JBrowse link NW_004955572 1,423,048 1,464,443 RGD:9068941
G Stub1 STIP1 homology and U-box containing protein 1 JBrowse link NW_004955442 16,521,130 16,523,733 RGD:9068941
G Synpo2 synaptopodin 2 JBrowse link NW_004955428 21,152,210 21,323,254 RGD:9068941
chaperone-mediated protein transport involved in chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link NW_004955412 23,863,513 23,867,984 RGD:9068941
chitin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chit1 chitinase 1 JBrowse link NW_004955406 39,229,161 39,253,328 RGD:9068941
G Ctbs chitobiase JBrowse link NW_004955423 9,327,945 9,343,923 RGD:9068941
cholesterol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1d1 aldo-keto reductase family 1 member D1 JBrowse link NW_004955494 4,799,706 4,856,100 RGD:9068941
G Apoe apolipoprotein E JBrowse link NW_004955555 1,998,170 2,002,003 RGD:9068941
G Cel carboxyl ester lipase JBrowse link NW_004955513 2,324,025 2,382,877 RGD:9068941
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 JBrowse link NW_004955493 7,835,160 7,838,428 RGD:9068941
G LOC102004889 sterol 26-hydroxylase, mitochondrial JBrowse link NW_004955453 14,601,495 14,647,383 RGD:9068941
G LOC102006164 24-hydroxycholesterol 7-alpha-hydroxylase JBrowse link NW_004955437 11,444,780 11,497,268 RGD:9068941
G LOC102008593 cholesterol 7-alpha-monooxygenase JBrowse link NW_004955454 17,035,105 17,078,854 RGD:9068941
G LOC102030124 cholesterol 24-hydroxylase JBrowse link NW_004955438 20,961,621 20,986,260 RGD:9068941
G Scarb1 scavenger receptor class B member 1 JBrowse link NW_004955482 4,813,502 4,836,479 RGD:9068941
choline catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmgdh dimethylglycine dehydrogenase JBrowse link NW_004955425 22,045,977 22,103,381 RGD:9068941
chondroitin sulfate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hyal4 hyaluronidase 4 JBrowse link NW_004955479 5,355,667 5,364,092 RGD:9068941
cobalamin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cubn cubilin JBrowse link NW_004955429 10,789,674 11,038,297 RGD:9068941
coenzyme A catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt7 nudix hydrolase 7 JBrowse link NW_004955522 945,186 960,094 RGD:9068941
collagen catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctsb cathepsin B JBrowse link NW_004955403 53,086,236 53,100,217 RGD:9068941
G Ctsk cathepsin K JBrowse link NW_004955588 149,036 158,093 RGD:9068941
G Ctss cathepsin S JBrowse link NW_004955413 99,279 124,793 RGD:9068941
G Mmp11 matrix metallopeptidase 11 JBrowse link NW_004955455 8,458,622 8,464,037 RGD:9068941
G Mmp13 matrix metallopeptidase 13 JBrowse link NW_004955412 6,106,994 6,118,760 RGD:9068941
G Mmp14 matrix metallopeptidase 14 JBrowse link NW_004955409 37,438,924 37,448,704 RGD:9068941
G Mmp16 matrix metallopeptidase 16 JBrowse link NW_004955417 5,298,334 5,545,121 RGD:9068941
G Mmp2 matrix metallopeptidase 2 JBrowse link NW_004955433 13,024,844 13,050,041 RGD:9068941
G Mmp9 matrix metallopeptidase 9 JBrowse link NW_004955445 11,295,500 11,303,322 RGD:9068941
G Mrc2 mannose receptor C type 2 JBrowse link NW_004955478 9,035,436 9,062,706 RGD:9068941
coumarin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pon3 paraoxonase 3 JBrowse link NW_004955432 11,945,383 11,983,417 RGD:9068941
CRD-mediated mRNA stabilization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhx9 DExH-box helicase 9 JBrowse link NW_004955406 21,697,813 21,743,551 RGD:9068941
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link NW_004955406 8,000,269 8,021,554 RGD:9068941
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 JBrowse link NW_004955451 12,312,715 12,348,663 RGD:9068941
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein JBrowse link NW_004955411 13,068,078 13,096,936 RGD:9068941
G Ybx1 Y-box binding protein 1 JBrowse link NW_004955537 2,234,052 2,254,528 RGD:9068941
CUT catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease JBrowse link NW_004955404 33,897,681 33,924,069 RGD:9068941
G Exosc10 exosome component 10 JBrowse link NW_004955486 2,601,362 2,626,451 RGD:9068941
G Exosc3 exosome component 3 JBrowse link NW_004955419 28,683,896 28,692,006 RGD:9068941
cytidine deamination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cda cytidine deaminase JBrowse link NW_004955452 1,131,968 1,156,777 RGD:9068941
G Cdadc1 cytidine and dCMP deaminase domain containing 1 JBrowse link NW_004955431 2,724,988 2,767,539 RGD:9068941
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnf126 ring finger protein 126 JBrowse link NW_004955495 7,083,952 7,098,442 RGD:9068941
cytosolic lipolysis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin JBrowse link NW_004955599 505,725 514,225 RGD:9068941
D-alanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dao D-amino acid oxidase JBrowse link NW_004955455 10,095,597 10,127,244 RGD:9068941
D-amino acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddo D-aspartate oxidase JBrowse link NW_004955411 35,142,415 35,163,234 RGD:9068941
D-glucuronate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1a1 aldo-keto reductase family 1 member A1 JBrowse link NW_004955464 12,715,238 12,729,034 RGD:9068941
D-ribose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt5 nudix hydrolase 5 JBrowse link NW_004955462 190,872 211,975 RGD:9068941
D-serine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dao D-amino acid oxidase JBrowse link NW_004955455 10,095,597 10,127,244 RGD:9068941
D-xylose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhdh dihydrodiol dehydrogenase JBrowse link NW_004955559 1,706,950 1,719,220 RGD:9068941
dADP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt18 nudix hydrolase 18 JBrowse link NW_004955403 45,598,813 45,601,940 RGD:9068941
dATP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ada adenosine deaminase JBrowse link NW_004955445 12,696,096 12,717,488 RGD:9068941
G Nudt1 nudix hydrolase 1 JBrowse link NW_004955460 9,678,270 9,689,106 RGD:9068941
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link NW_004955422 24,714,103 24,780,672 RGD:9068941
dCTP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dctpp1 dCTP pyrophosphatase 1 JBrowse link NW_004955493 7,357,204 7,360,034 RGD:9068941
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnot7 CCR4-NOT transcription complex subunit 7 JBrowse link NW_004955463 285,228 306,077 RGD:9068941
G Noct nocturnin JBrowse link NW_004955428 4,559,027 4,580,013 RGD:9068941
G Pan3 poly(A) specific ribonuclease subunit PAN3 JBrowse link NW_004955497 7,500,478 7,646,541 RGD:9068941
G Patl1 PAT1 homolog 1, processing body mRNA decay factor JBrowse link NW_004955511 4,090,841 4,119,077 RGD:9068941
deoxyadenosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ada adenosine deaminase JBrowse link NW_004955445 12,696,096 12,717,488 RGD:9068941
deoxyribonucleoside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dera deoxyribose-phosphate aldolase JBrowse link NW_004955413 12,571,341 12,682,985 RGD:9068941
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 JBrowse link NW_004955437 9,145,737 9,147,388 RGD:9068941
deoxyribonucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nt5c 5', 3'-nucleotidase, cytosolic JBrowse link NW_004955553 2,011,549 2,014,209 RGD:9068941
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link NW_004955422 24,714,103 24,780,672 RGD:9068941
dermatan sulfate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idua alpha-L-iduronidase JBrowse link NW_004955514 474,830 488,007 RGD:9068941
dGDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt18 nudix hydrolase 18 JBrowse link NW_004955403 45,598,813 45,601,940 RGD:9068941
dGTP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt1 nudix hydrolase 1 JBrowse link NW_004955460 9,678,270 9,689,106 RGD:9068941
G Nudt15 nudix hydrolase 15 JBrowse link NW_004955431 1,767,971 1,775,555 RGD:9068941
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link NW_004955422 24,714,103 24,780,672 RGD:9068941
diacylglycerol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa2 apolipoprotein A2 JBrowse link NW_004955468 12,977,956 12,979,282 RGD:9068941
G Dagla diacylglycerol lipase alpha JBrowse link NW_004955511 5,952,134 5,997,280 RGD:9068941
G Lipe lipase E, hormone sensitive type JBrowse link NW_004955555 511,085 531,165 RGD:9068941
G Plb1 phospholipase B1 JBrowse link NW_004955469 10,370,646 10,511,263 RGD:9068941
diadenosine triphosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fhit fragile histidine triad diadenosine triphosphatase JBrowse link NW_004955430 221,518 508,094 RGD:9068941
dibenzo-p-dioxin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC102010850 cytochrome P450 1A1 JBrowse link NW_004955450 3,183,958 3,189,488 RGD:9068941
dicarboxylic acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot8 acyl-CoA thioesterase 8 JBrowse link NW_004955445 11,434,649 11,454,806 RGD:9068941
diphosphoinositol polyphosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt3 nudix hydrolase 3 JBrowse link NW_004955437 2,497,720 2,584,280 RGD:9068941
dITP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt16 nudix hydrolase 16 JBrowse link NW_004955501 7,083,068 7,085,505 RGD:9068941
DNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dffb DNA fragmentation factor subunit beta JBrowse link NW_004955486 7,836,013 7,849,875 RGD:9068941
G Dnase1l2 deoxyribonuclease 1 like 2 JBrowse link NW_004955442 15,028,168 15,031,110 RGD:9068941
G Trex1 three prime repair exonuclease 1 JBrowse link NW_004955532 533,877 535,767 RGD:9068941
DNA catabolic process, endonucleolytic term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnase1 deoxyribonuclease 1 JBrowse link NW_004955442 13,733,107 13,736,527 RGD:9068941
G Dnase1l3 deoxyribonuclease 1 like 3 JBrowse link NW_004955430 7,867,172 7,892,079 RGD:9068941
G Fbh1 F-box DNA helicase 1 JBrowse link NW_004955421 22,535,777 22,579,965 RGD:9068941
G LOC102020128 histone-lysine N-methyltransferase SETMAR JBrowse link NW_004955421 9,066,906 9,080,352 RGD:9068941
G Mus81 MUS81 structure-specific endonuclease subunit JBrowse link NW_004955422 19,471,552 19,479,121 RGD:9068941
G Rexo4 REX4 homolog, 3'-5' exonuclease JBrowse link NW_004955513 2,745,220 2,754,927 RGD:9068941
DNA catabolic process, exonucleolytic term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Isg20 interferon stimulated exonuclease gene 20 JBrowse link NW_004955416 16,305,534 16,321,596 RGD:9068941
G Rexo4 REX4 homolog, 3'-5' exonuclease JBrowse link NW_004955513 2,745,220 2,754,927 RGD:9068941
G Xrn2 5'-3' exoribonuclease 2 JBrowse link NW_004955415 29,107,060 29,175,374 RGD:9068941
DNA replication, removal of RNA primer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dna2 DNA replication helicase/nuclease 2 JBrowse link NW_004955425 20,664,412 20,705,070 RGD:9068941
G Fen1 flap structure-specific endonuclease 1 JBrowse link NW_004955511 5,918,667 5,922,506 RGD:9068941
dopamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Comt catechol-O-methyltransferase JBrowse link NW_004955442 18,130,282 18,152,153 RGD:9068941
G Dbh dopamine beta-hydroxylase JBrowse link NW_004955513 2,918,085 2,932,481 RGD:9068941
G Maoa amine oxidase [flavin-containing] A JBrowse link NW_004955516 4,494,133 4,576,317 RGD:9068941
G Slc6a3 solute carrier family 6 member 3 JBrowse link NW_004955504 721,470 747,553 RGD:9068941
drug catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fmo4 flavin containing dimethylaniline monoxygenase 4 JBrowse link NW_004955406 11,967,045 11,987,105 RGD:9068941
G LOC102010322 cytochrome P450 1A2 JBrowse link NW_004955450 3,165,107 3,171,894 RGD:9068941
dTTP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dctpp1 dCTP pyrophosphatase 1 JBrowse link NW_004955493 7,357,204 7,360,034 RGD:9068941
dUMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nt5m 5',3'-nucleotidase, mitochondrial JBrowse link NW_004955577 582,206 608,614 RGD:9068941
dUTP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dut deoxyuridine triphosphatase JBrowse link NW_004955409 5,574,810 5,584,135 RGD:9068941
elastin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cela1 chymotrypsin like elastase 1 JBrowse link NW_004955547 1,810,680 1,823,938 RGD:9068941
G Mmp12 matrix metallopeptidase 12 JBrowse link NW_004955412 6,045,146 6,057,112 RGD:9068941
engulfment of target by autophagosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link NW_004955460 14,774,545 14,860,783 RGD:9068941
epidermal growth factor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rab7a RAB7A, member RAS oncogene family JBrowse link NW_004955429 15,103,792 15,167,498 RGD:9068941
G Snx5 sorting nexin 5 JBrowse link NW_004955415 26,786,836 26,805,762 RGD:9068941
ER-associated misfolded protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor JBrowse link NW_004955424 11,259,288 11,262,413 RGD:9068941
G Bag6 BAG cochaperone 6 JBrowse link NW_004955437 176,848 188,243 RGD:9068941
G Derl1 derlin 1 JBrowse link NW_004955540 1,918,230 1,944,186 RGD:9068941
G Rnf5 ring finger protein 5 JBrowse link NW_004955437 643,133 645,528 RGD:9068941
G Sdf2l1 stromal cell derived factor 2 like 1 JBrowse link NW_004955442 17,468,302 17,470,296 RGD:9068941
G Tor1a torsin family 1 member A JBrowse link NW_004955513 30,655 36,299 RGD:9068941
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link NW_004955442 18,548,545 18,568,989 RGD:9068941
G Vcp valosin containing protein JBrowse link NW_004955472 1,111,649 1,124,076 RGD:9068941
ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brsk2 BR serine/threonine kinase 2 JBrowse link NW_004955476 10,911,515 10,951,544 RGD:9068941
G Ccdc47 coiled-coil domain containing 47 JBrowse link NW_004955478 8,053,057 8,074,530 RGD:9068941
G Derl1 derlin 1 JBrowse link NW_004955540 1,918,230 1,944,186 RGD:9068941
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 JBrowse link NW_004955437 19,266,206 19,285,654 RGD:9068941
G Rcn3 reticulocalbin 3 JBrowse link NW_004955559 1,309,621 1,319,925 RGD:9068941
G Rhbdd1 rhomboid domain containing 1 JBrowse link NW_004955453 7,527,090 7,656,689 RGD:9068941
G Rnf139 ring finger protein 139 JBrowse link NW_004955540 3,140,649 3,153,546 RGD:9068941
G Rnf185 ring finger protein 185 JBrowse link NW_004955455 5,351,530 5,394,615 RGD:9068941
G Rnf5 ring finger protein 5 JBrowse link NW_004955437 643,133 645,528 RGD:9068941
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase JBrowse link NW_004955438 5,030,915 5,082,015 RGD:9068941
G Syvn1 synoviolin 1 JBrowse link NW_004955422 20,067,933 20,074,947 RGD:9068941
G Ubxn6 UBX domain protein 6 JBrowse link NW_004955495 4,456,182 4,465,954 RGD:9068941
G Vcp valosin containing protein JBrowse link NW_004955472 1,111,649 1,124,076 RGD:9068941
ethanol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide JBrowse link NW_004955496 8,136,279 8,149,496 RGD:9068941
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link NW_004955496 8,065,943 8,100,878 RGD:9068941
exogenous drug catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC102010322 cytochrome P450 1A2 JBrowse link NW_004955450 3,165,107 3,171,894 RGD:9068941
G LOC102012414 cytochrome P450 4B1 JBrowse link NW_004955464 11,539,467 11,556,519 RGD:9068941
G Nos1 nitric oxide synthase 1 JBrowse link NW_004955455 13,797,557 13,978,402 RGD:9068941
G Nr1i2 nuclear receptor subfamily 1 group I member 2 JBrowse link NW_004955427 19,459,936 19,487,276 RGD:9068941
G Nudt15 nudix hydrolase 15 JBrowse link NW_004955431 1,767,971 1,775,555 RGD:9068941
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnot6 CCR4-NOT transcription complex subunit 6 JBrowse link NW_004955408 170,399 239,492 RGD:9068941
G Cnot7 CCR4-NOT transcription complex subunit 7 JBrowse link NW_004955463 285,228 306,077 RGD:9068941
G Cnot8 CCR4-NOT transcription complex subunit 8 JBrowse link NW_004955408 9,112,208 9,132,650 RGD:9068941
G Exosc3 exosome component 3 JBrowse link NW_004955419 28,683,896 28,692,006 RGD:9068941
G Exosc5 exosome component 5 JBrowse link NW_004955555 328,130 334,106 RGD:9068941
G Exosc9 exosome component 9 JBrowse link NW_004955428 18,732,733 18,743,743 RGD:9068941
fatty acid alpha-oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hacl1 2-hydroxyacyl-CoA lyase 1 JBrowse link NW_004955430 2,055,774 2,096,260 RGD:9068941
G Hao1 hydroxyacid oxidase 1 JBrowse link NW_004955415 17,981,791 18,035,151 RGD:9068941
G Ilvbl ilvB acetolactate synthase like JBrowse link NW_004955495 8,130,875 8,140,152 RGD:9068941
G Pex13 peroxisomal biogenesis factor 13 JBrowse link NW_004955424 22,799,568 22,830,718 RGD:9068941
G Phyh phytanoyl-CoA 2-hydroxylase JBrowse link NW_004955462 1,238,622 1,250,731 RGD:9068941
G Slc27a2 solute carrier family 27 member 2 JBrowse link NW_004955409 4,077,685 4,112,828 RGD:9068941
fatty acid beta-oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link NW_004955580 459,715 475,363 RGD:9068941
G Abcd2 ATP binding cassette subfamily D member 2 JBrowse link NW_004955505 717,800 769,702 RGD:9068941
G Abcd3 ATP binding cassette subfamily D member 3 JBrowse link NW_004955423 280,497 359,711 RGD:9068941
G Acaa2 acetyl-CoA acyltransferase 2 JBrowse link NW_004955402 34,857,317 34,885,169 RGD:9068941
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link NW_004955423 17,173,648 17,199,189 RGD:9068941
G Acadvl acyl-CoA dehydrogenase very long chain JBrowse link NW_004955467 9,684,070 9,689,454 RGD:9068941
G Acox2 acyl-CoA oxidase 2 JBrowse link NW_004955430 1,638,931 1,665,308 RGD:9068941
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link NW_004955420 20,911,181 20,922,992 RGD:9068941
G Bdh2 3-hydroxybutyrate dehydrogenase 2 JBrowse link NW_004955496 5,518,403 5,534,325 RGD:9068941
G Cpt1a carnitine palmitoyltransferase 1A JBrowse link NW_004955422 17,105,887 17,159,696 RGD:9068941
G Cpt2 carnitine palmitoyltransferase 2 JBrowse link NW_004955464 5,942,986 5,970,325 RGD:9068941
G Crot carnitine O-octanoyltransferase JBrowse link NW_004955607 379,121 413,394 RGD:9068941
G Decr1 2,4-dienoyl-CoA reductase 1 JBrowse link NW_004955417 6,893,231 6,931,754 RGD:9068941
G Echs1 enoyl-CoA hydratase, short chain 1 JBrowse link NW_004955477 11,012,451 11,021,487 RGD:9068941
G Eci1 enoyl-CoA delta isomerase 1 JBrowse link NW_004955442 15,010,412 15,027,014 RGD:9068941
G Eci2 enoyl-CoA delta isomerase 2 JBrowse link NW_004955465 9,297,794 9,314,409 RGD:9068941
G Hadh hydroxyacyl-CoA dehydrogenase JBrowse link NW_004955496 1,835,034 1,861,410 RGD:9068941
G Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha JBrowse link NW_004955469 8,183,945 8,233,869 RGD:9068941
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta JBrowse link NW_004955469 8,233,980 8,272,149 RGD:9068941
G Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 JBrowse link NW_004955408 39,041,028 39,136,867 RGD:9068941
G Lep leptin JBrowse link NW_004955479 9,266,604 9,276,568 RGD:9068941
G Pex2 peroxisomal biogenesis factor 2 JBrowse link NW_004955444 3,811,972 3,830,666 RGD:9068941
G Pex5 peroxisomal biogenesis factor 5 JBrowse link NW_004955413 4,736,189 4,755,559 RGD:9068941
G Pex7 peroxisomal biogenesis factor 7 JBrowse link NW_004955439 71,302 138,278 RGD:9068941
G Scp2 sterol carrier protein 2 JBrowse link NW_004955464 6,097,241 6,224,287 RGD:9068941
G Sesn2 sestrin 2 JBrowse link NW_004955452 7,392,644 7,417,204 RGD:9068941
G Slc25a17 solute carrier family 25 member 17 JBrowse link NW_004955413 26,423,805 26,474,158 RGD:9068941
G Slc27a2 solute carrier family 27 member 2 JBrowse link NW_004955409 4,077,685 4,112,828 RGD:9068941
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acad11 acyl-CoA dehydrogenase family member 11 JBrowse link NW_004955501 5,871,328 5,952,786 RGD:9068941
G Acadl acyl-CoA dehydrogenase long chain JBrowse link NW_004955457 5,266,032 5,300,632 RGD:9068941
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link NW_004955423 17,173,648 17,199,189 RGD:9068941
G Acads acyl-CoA dehydrogenase short chain JBrowse link NW_004955455 10,928,560 10,942,748 RGD:9068941
G Acadvl acyl-CoA dehydrogenase very long chain JBrowse link NW_004955467 9,684,070 9,689,454 RGD:9068941
G Etfa electron transfer flavoprotein subunit alpha JBrowse link NW_004955450 1,392,526 1,451,591 RGD:9068941
G Etfb electron transfer flavoprotein subunit beta JBrowse link NW_004955558 1,032,743 1,046,300 RGD:9068941
G Etfdh electron transfer flavoprotein dehydrogenase JBrowse link NW_004955471 12,282,601 12,308,792 RGD:9068941
G Gcdh glutaryl-CoA dehydrogenase JBrowse link NW_004955415 31,952,400 31,958,067 RGD:9068941
G Ivd isovaleryl-CoA dehydrogenase JBrowse link NW_004955416 7,327,557 7,341,533 RGD:9068941
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acox1 acyl-CoA oxidase 1 JBrowse link NW_004955506 6,286,824 6,309,764 RGD:9068941
G Acox2 acyl-CoA oxidase 2 JBrowse link NW_004955430 1,638,931 1,665,308 RGD:9068941
G Acox3 acyl-CoA oxidase 3, pristanoyl JBrowse link NW_004955514 2,653,502 2,690,452 RGD:9068941
G Crat carnitine O-acetyltransferase JBrowse link NW_004955570 1,417,608 1,428,720 RGD:9068941
fatty acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadl acyl-CoA dehydrogenase long chain JBrowse link NW_004955457 5,266,032 5,300,632 RGD:9068941
G Acadvl acyl-CoA dehydrogenase very long chain JBrowse link NW_004955467 9,684,070 9,689,454 RGD:9068941
G Acot7 acyl-CoA thioesterase 7 JBrowse link NW_004955486 6,188,102 6,258,230 RGD:9068941
G Eci2 enoyl-CoA delta isomerase 2 JBrowse link NW_004955465 9,297,794 9,314,409 RGD:9068941
G Faah fatty acid amide hydrolase JBrowse link NW_004955464 11,873,368 11,885,366 RGD:9068941
G Lep leptin JBrowse link NW_004955479 9,266,604 9,276,568 RGD:9068941
G Lpin1 lipin 1 JBrowse link NW_004955487 6,139,188 6,207,316 RGD:9068941
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vcp valosin containing protein JBrowse link NW_004955472 1,111,649 1,124,076 RGD:9068941
folic acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mthfs methenyltetrahydrofolate synthetase JBrowse link NW_004955533 720,255 756,893 RGD:9068941
G protein-coupled receptor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gprasp1 G protein-coupled receptor associated sorting protein 1 JBrowse link NW_004955548 132,373 137,817 RGD:9068941
galactolipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnliprp2 pancreatic lipase related protein 2 JBrowse link NW_004955431 21,425,345 21,442,979 RGD:9068941
galactose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gale UDP-galactose-4-epimerase JBrowse link NW_004955452 3,715,107 3,719,288 RGD:9068941
G Glb1 galactosidase beta 1 JBrowse link NW_004955421 230,957 311,504 RGD:9068941
galactosylceramide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Galc galactosylceramidase JBrowse link NW_004955438 10,667,807 10,704,386 RGD:9068941
G Psap prosaposin JBrowse link NW_004955437 19,667,252 19,683,669 RGD:9068941
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abat 4-aminobutyrate aminotransferase JBrowse link NW_004955442 9,422,849 9,516,054 RGD:9068941
G Aldh5a1 aldehyde dehydrogenase 5 family member A1 JBrowse link NW_004955483 2,467,425 2,494,416 RGD:9068941
ganglioside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gm2a GM2 ganglioside activator JBrowse link NW_004955408 2,442,406 2,449,426 RGD:9068941
G Hexa hexosaminidase subunit alpha JBrowse link NW_004955450 4,790,342 4,806,862 RGD:9068941
G Hexb hexosaminidase subunit beta JBrowse link NW_004955425 25,942,341 25,961,312 RGD:9068941
G Neu2 neuraminidase 2 JBrowse link NW_004955453 3,054,626 3,063,070 RGD:9068941
G Neu3 neuraminidase 3 JBrowse link NW_004955414 16,783,996 16,798,368 RGD:9068941
G Neu4 neuraminidase 4 JBrowse link NW_004955542 66,214 70,456 RGD:9068941
GDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt18 nudix hydrolase 18 JBrowse link NW_004955403 45,598,813 45,601,940 RGD:9068941
glucocorticoid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 JBrowse link NW_004955489 2,500,928 2,524,715 RGD:9068941
G Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta JBrowse link NW_004955455 6,045,919 6,057,729 RGD:9068941
glucosamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gnpda1 glucosamine-6-phosphate deaminase 1 JBrowse link NW_004955415 11,770,111 11,783,430 RGD:9068941
glucose catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bad BCL2 associated agonist of cell death JBrowse link NW_004955422 20,795,585 20,809,039 RGD:9068941
G Lrp5 LDL receptor related protein 5 JBrowse link NW_004955422 17,394,371 17,475,244 RGD:9068941
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 JBrowse link NW_004955406 42,573,210 42,601,994 RGD:9068941
glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ldha lactate dehydrogenase A JBrowse link NW_004955414 33,087,745 33,100,846 RGD:9068941
glucosylceramide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gba glucosylceramidase beta JBrowse link NW_004955545 1,682,097 1,689,373 RGD:9068941
G Gba2 glucosylceramidase beta 2 JBrowse link NW_004955472 553,556 564,411 RGD:9068941
glucuronoside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd10 abhydrolase domain containing 10, depalmitoylase JBrowse link NW_004955427 12,388,945 12,403,703 RGD:9068941
G Gusb glucuronidase beta JBrowse link NW_004955456 8,377,161 8,392,298 RGD:9068941
glutamate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Glud1 glutamate dehydrogenase 1 JBrowse link NW_004955510 5,987,811 6,021,001 RGD:9068941
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link NW_004955507 5,346,937 5,370,072 RGD:9068941
G Got2 glutamic-oxaloacetic transaminase 2 JBrowse link NW_004955433 16,121,795 16,145,129 RGD:9068941
glutamate catabolic process to aspartate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link NW_004955507 5,346,937 5,370,072 RGD:9068941
G Got2 glutamic-oxaloacetic transaminase 2 JBrowse link NW_004955433 16,121,795 16,145,129 RGD:9068941
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adhfe1 alcohol dehydrogenase iron containing 1 JBrowse link NW_004955444 12,706,404 12,745,106 RGD:9068941
glutamate decarboxylation to succinate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gad2 glutamate decarboxylase 2 JBrowse link NW_004955429 3,092,977 3,170,128 RGD:9068941
glutamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gls glutaminase JBrowse link NW_004955403 8,195,241 8,261,402 RGD:9068941
G Ppat phosphoribosyl pyrophosphate amidotransferase JBrowse link NW_004955447 14,552,846 14,607,416 RGD:9068941
glutathione catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dpep1 dipeptidase 1 JBrowse link NW_004955541 3,204,421 3,215,514 RGD:9068941
G Ggt1 gamma-glutamyltransferase 1 JBrowse link NW_004955455 8,082,578 8,099,523 RGD:9068941
G Ggt5 gamma-glutamyltransferase 5 JBrowse link NW_004955455 8,101,251 8,125,597 RGD:9068941
glycerophospholipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd12 abhydrolase domain containing 12, lysophospholipase JBrowse link NW_004955415 31,284,947 31,337,703 RGD:9068941
G Lipc lipase C, hepatic type JBrowse link NW_004955450 15,947,869 16,062,449 RGD:9068941
G Pla2g4b phospholipase A2 group IVB JBrowse link NW_004955416 8,633,249 8,643,219 RGD:9068941
G Pla2g4c phospholipase A2 group IVC JBrowse link NW_004955609 182,706 212,102 RGD:9068941
G Pla2g4d phospholipase A2 group IVD JBrowse link NW_004955416 8,841,645 8,860,381 RGD:9068941
G Prdx6 peroxiredoxin 6 JBrowse link NW_004955406 13,717,267 13,728,216 RGD:9068941
G Smpd4 sphingomyelin phosphodiesterase 4 JBrowse link NW_004955442 19,184,794 19,210,999 RGD:9068941
glycine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gldc glycine decarboxylase JBrowse link NW_004955434 10,431,434 10,533,118 RGD:9068941
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amt aminomethyltransferase JBrowse link NW_004955532 1,351,743 1,358,220 RGD:9068941
G Gcsh glycine cleavage system protein H JBrowse link NW_004955522 3,858,156 3,869,730 RGD:9068941
G Gldc glycine decarboxylase JBrowse link NW_004955434 10,431,434 10,533,118 RGD:9068941
glycogen catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adrb1 adrenoceptor beta 1 JBrowse link NW_004955431 19,025,663 19,027,026 RGD:9068941
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase JBrowse link NW_004955435 4,622,142 4,684,439 RGD:9068941
G G6pc glucose-6-phosphatase catalytic subunit JBrowse link NW_004955451 16,672,512 16,680,001 RGD:9068941
G Gaa glucosidase alpha, acid JBrowse link NW_004955506 2,764,959 2,783,231 RGD:9068941
G Pfkm phosphofructokinase, muscle JBrowse link NW_004955500 6,979,169 7,020,375 RGD:9068941
G Pygb glycogen phosphorylase B JBrowse link NW_004955415 31,254,240 31,283,651 RGD:9068941
G Pygl glycogen phosphorylase L JBrowse link NW_004955409 11,970,112 12,007,102 RGD:9068941
G Pygm glycogen phosphorylase, muscle associated JBrowse link NW_004955422 20,411,480 20,424,676 RGD:9068941
G Stbd1 starch binding domain 1 JBrowse link NW_004955433 1,036,265 1,038,652 RGD:9068941
glycolate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hao1 hydroxyacid oxidase 1 JBrowse link NW_004955415 17,981,791 18,035,151 RGD:9068941
glycolipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naga alpha-N-acetylgalactosaminidase JBrowse link NW_004955413 27,463,931 27,472,273 RGD:9068941
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pfkm phosphofructokinase, muscle JBrowse link NW_004955500 6,979,169 7,020,375 RGD:9068941
glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldob aldolase, fructose-bisphosphate B JBrowse link NW_004955419 24,377,427 24,389,909 RGD:9068941
G Eno1 enolase 1 JBrowse link NW_004955486 4,275,371 4,287,152 RGD:9068941
G Eno2 enolase 2 JBrowse link NW_004955413 4,498,625 4,506,769 RGD:9068941
G Eno4 enolase 4 JBrowse link NW_004955431 21,625,808 21,650,282 RGD:9068941
G Gapdh glyceraldehyde-3-phosphate dehydrogenase JBrowse link NW_004955413 4,162,467 4,166,783 RGD:9068941
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link NW_004955468 4,757,080 4,773,675 RGD:9068941
G Gck glucokinase JBrowse link NW_004955456 7,784,269 7,838,260 RGD:9068941
G Gpi glucose-6-phosphate isomerase JBrowse link NW_004955468 3,980,999 4,007,553 RGD:9068941
G Hk1 hexokinase 1 JBrowse link NW_004955437 21,733,314 21,824,303 RGD:9068941
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 JBrowse link NW_004955406 42,573,210 42,601,994 RGD:9068941
G Pfkl phosphofructokinase, liver type JBrowse link NW_004955407 41,131,022 41,145,392 RGD:9068941
G Pfkm phosphofructokinase, muscle JBrowse link NW_004955500 6,979,169 7,020,375 RGD:9068941
G Pfkp phosphofructokinase, platelet JBrowse link NW_004955421 28,042,973 28,098,358 RGD:9068941
G Pgam1 phosphoglycerate mutase 1 JBrowse link NW_004955507 3,562,513 3,571,400 RGD:9068941
G Pgam2 phosphoglycerate mutase 2 JBrowse link NW_004955456 7,909,891 7,912,116 RGD:9068941
G Pgk1 phosphoglycerate kinase 1 JBrowse link NW_004955557 1,566,534 1,584,799 RGD:9068941
G Pgk2 phosphoglycerate kinase 2 JBrowse link NW_004955411 8,216,432 8,218,065 RGD:9068941
G Pklr pyruvate kinase L/R JBrowse link NW_004955545 1,742,432 1,749,632 RGD:9068941
G Pkm pyruvate kinase M1/2 JBrowse link NW_004955450 4,907,962 4,935,179 RGD:9068941
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 JBrowse link NW_004955453 14,584,405 14,594,112 RGD:9068941
glycolytic process from galactose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Galk1 galactokinase 1 JBrowse link NW_004955506 6,489,799 6,493,354 RGD:9068941
G Galt galactose-1-phosphate uridylyltransferase JBrowse link NW_004955472 1,487,173 1,490,548 RGD:9068941
glycolytic process through fructose-6-phosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pfkl phosphofructokinase, liver type JBrowse link NW_004955407 41,131,022 41,145,392 RGD:9068941
G Pfkm phosphofructokinase, muscle JBrowse link NW_004955500 6,979,169 7,020,375 RGD:9068941
glycophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Stbd1 starch binding domain 1 JBrowse link NW_004955433 1,036,265 1,038,652 RGD:9068941
glycoprotein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 JBrowse link NW_004955406 23,329,400 23,401,282 RGD:9068941
G Fbxo2 F-box protein 2 JBrowse link NW_004955486 2,212,001 2,217,260 RGD:9068941
G Fbxo6 F-box protein 6 JBrowse link NW_004955486 2,197,296 2,205,947 RGD:9068941
G Manba mannosidase beta JBrowse link NW_004955496 5,744,374 5,837,974 RGD:9068941
G Neu4 neuraminidase 4 JBrowse link NW_004955542 66,214 70,456 RGD:9068941
G Ngly1 N-glycanase 1 JBrowse link NW_004955430 17,564,319 17,645,564 RGD:9068941
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B JBrowse link NW_004955430 22,986,673 23,070,923 RGD:9068941
glycosaminoglycan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hyal2 hyaluronidase 2 JBrowse link NW_004955532 2,120,781 2,125,083 RGD:9068941
G Ids iduronate 2-sulfatase JBrowse link NW_004955498 1,863,002 1,886,720 RGD:9068941
G Idua alpha-L-iduronidase JBrowse link NW_004955514 474,830 488,007 RGD:9068941
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 JBrowse link NW_004955414 26,161,768 26,175,621 RGD:9068941
G Sgsh N-sulfoglucosamine sulfohydrolase JBrowse link NW_004955506 2,701,901 2,713,431 RGD:9068941
glycoside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fuca1 alpha-L-fucosidase 1 JBrowse link NW_004955452 3,744,071 3,759,776 RGD:9068941
G Fuca2 alpha-L-fucosidase 2 JBrowse link NW_004955436 16,896,629 16,912,406 RGD:9068941
G Gba2 glucosylceramidase beta 2 JBrowse link NW_004955472 553,556 564,411 RGD:9068941
glycosphingolipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gla galactosidase alpha JBrowse link NW_004955503 7,526,077 7,535,817 RGD:9068941
glycosylceramide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gla galactosidase alpha JBrowse link NW_004955503 7,526,077 7,535,817 RGD:9068941
glyoxylate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase JBrowse link NW_004955542 710,506 720,564 RGD:9068941
G Agxt2 alanine--glyoxylate aminotransferase 2 JBrowse link NW_004955426 20,102,368 20,142,596 RGD:9068941
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 JBrowse link NW_004955507 3,687,449 3,711,939 RGD:9068941
GMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link NW_004955473 462,940 510,006 RGD:9068941
G Prtfdc1 phosphoribosyl transferase domain containing 1 JBrowse link NW_004955429 4,234,806 4,325,896 RGD:9068941
heme catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Blvrb biliverdin reductase B JBrowse link NW_004955578 813,834 834,675 RGD:9068941
G Hmox1 heme oxygenase 1 JBrowse link NW_004955405 43,124,447 43,128,873 RGD:9068941
heme oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hmox1 heme oxygenase 1 JBrowse link NW_004955405 43,124,447 43,128,873 RGD:9068941
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpc1 glypican 1 JBrowse link NW_004955542 947,556 968,295 RGD:9068941
G Hpse heparanase JBrowse link NW_004955474 6,367,467 6,394,395 RGD:9068941
G Sgsh N-sulfoglucosamine sulfohydrolase JBrowse link NW_004955506 2,701,901 2,713,431 RGD:9068941
heparin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idua alpha-L-iduronidase JBrowse link NW_004955514 474,830 488,007 RGD:9068941
histamine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnmt histamine N-methyltransferase JBrowse link NW_004955440 5,084,198 5,137,577 RGD:9068941
histidine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hal histidine ammonia-lyase JBrowse link NW_004955405 32,317,345 32,341,409 RGD:9068941
G Hdc histidine decarboxylase JBrowse link NW_004955409 4,051,574 4,072,641 RGD:9068941
G Uroc1 urocanate hydratase 1 JBrowse link NW_004955421 21,734,910 21,765,754 RGD:9068941
histone mRNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Dcp2 decapping mRNA 2 JBrowse link NW_004955408 32,868,184 32,923,788 RGD:9068941
G Eri1 exoribonuclease 1 JBrowse link NW_004955463 5,074,921 5,104,341 RGD:9068941
G Exosc10 exosome component 10 JBrowse link NW_004955486 2,601,362 2,626,451 RGD:9068941
G Exosc4 exosome component 4 JBrowse link NW_004955454 2,732,308 2,734,398 RGD:9068941
G Lsm1 LSM1 homolog, mRNA degradation associated JBrowse link NW_004955463 13,775,639 13,788,784 RGD:9068941
G Mtpap mitochondrial poly(A) polymerase JBrowse link NW_004955429 21,768,011 21,792,481 RGD:9068941
G Tent2 terminal nucleotidyltransferase 2 JBrowse link NW_004955425 21,518,154 21,576,068 RGD:9068941
G Tent4b terminal nucleotidyltransferase 4B JBrowse link NW_004955433 8,288,432 8,347,347 RGD:9068941
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific JBrowse link NW_004955599 596,565 606,498 RGD:9068941
G Tut4 terminal uridylyl transferase 4 JBrowse link NW_004955464 6,610,350 6,734,606 RGD:9068941
G Tut7 terminal uridylyl transferase 7 JBrowse link NW_004955432 1,268,217 1,330,385 RGD:9068941
G Upf1 UPF1 RNA helicase and ATPase JBrowse link NW_004955524 2,798,336 2,814,063 RGD:9068941
G Xrn1 5'-3' exoribonuclease 1 JBrowse link NW_004955508 3,441,540 3,561,896 RGD:9068941
homocysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbs cystathionine beta-synthase JBrowse link NW_004955407 38,924,355 38,939,790 RGD:9068941
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link NW_004955504 5,412,290 5,435,409 RGD:9068941
hormone catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ece1 endothelin converting enzyme 1 JBrowse link NW_004955452 1,653,783 1,704,619 RGD:9068941
G Ide insulin degrading enzyme JBrowse link NW_004955425 819,461 926,440 RGD:9068941
hyaluronan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd44 CD44 molecule (Indian blood group) JBrowse link NW_004955422 11,106,061 11,189,951 RGD:9068941
G Cemip cell migration inducing hyaluronidase 1 JBrowse link NW_004955416 11,562,047 11,699,925 RGD:9068941
G Cemip2 cell migration inducing hyaluronidase 2 JBrowse link NW_004955434 1,400,949 1,477,278 RGD:9068941
G Fgf2 fibroblast growth factor 2 JBrowse link NW_004955428 17,840,554 17,894,779 RGD:9068941
G Hyal1 hyaluronidase 1 JBrowse link NW_004955532 2,113,016 2,116,093 RGD:9068941
G Hyal2 hyaluronidase 2 JBrowse link NW_004955532 2,120,781 2,125,083 RGD:9068941
G Hyal3 hyaluronidase 3 JBrowse link NW_004955532 2,107,019 2,112,356 RGD:9068941
G Tgfb1 transforming growth factor beta 1 JBrowse link NW_004955555 274,405 288,441 RGD:9068941
hydrogen peroxide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa4 apolipoprotein A4 JBrowse link NW_004955412 18,158,095 18,160,636 RGD:9068941
G Cat catalase JBrowse link NW_004955422 11,783,973 11,826,970 RGD:9068941
G Gpx1 glutathione peroxidase 1 JBrowse link NW_004955532 1,298,336 1,298,830 RGD:9068941
G Gpx3 glutathione peroxidase 3 JBrowse link NW_004955408 2,622,162 2,629,088 RGD:9068941
G Hbb hemoglobin subunit beta JBrowse link NW_004955414 21,188,012 21,189,363 RGD:9068941
G Mpo myeloperoxidase JBrowse link NW_004955451 4,743,744 4,753,358 RGD:9068941
G Prdx1 peroxiredoxin 1 JBrowse link NW_004955464 12,761,390 12,773,413 RGD:9068941
G Prdx2 peroxiredoxin 2 JBrowse link NW_004955415 31,880,801 31,884,453 RGD:9068941
G Prdx3 peroxiredoxin 3 JBrowse link NW_004955431 23,640,775 23,651,738 RGD:9068941
G Prdx5 peroxiredoxin 5 JBrowse link NW_004955422 20,763,822 20,766,976 RGD:9068941
G Prdx6 peroxiredoxin 6 JBrowse link NW_004955406 13,717,267 13,728,216 RGD:9068941
G Pxdn peroxidasin JBrowse link NW_004955487 4,867,427 4,936,454 RGD:9068941
G Txnrd1 thioredoxin reductase 1 JBrowse link NW_004955405 38,863,762 38,928,615 RGD:9068941
IDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt16 nudix hydrolase 16 JBrowse link NW_004955501 7,083,068 7,085,505 RGD:9068941
G Nudt9 nudix hydrolase 9 JBrowse link NW_004955474 2,402,400 2,438,145 RGD:9068941
induction by virus of host autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link NW_004955416 6,897,897 7,005,602 RGD:9068941
G Phb2 prohibitin 2 JBrowse link NW_004955413 4,557,969 4,563,697 RGD:9068941
inosine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnp purine nucleoside phosphorylase JBrowse link NW_004955550 1,290,816 1,299,553 RGD:9068941
inositol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Miox myo-inositol oxygenase JBrowse link NW_004955413 33,476,097 33,478,539 RGD:9068941
inositol phosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ntsr1 neurotensin receptor 1 JBrowse link NW_004955528 1,348,616 1,394,798 RGD:9068941
inositol phosphate dephosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Impa1 inositol monophosphatase 1 JBrowse link NW_004955417 14,114 40,128 RGD:9068941
G Impa2 inositol monophosphatase 2 JBrowse link NW_004955402 1,119,376 1,143,589 RGD:9068941
G Inpp4b inositol polyphosphate-4-phosphatase type II B JBrowse link NW_004955471 938,005 1,291,695 RGD:9068941
G Inpp5a inositol polyphosphate-5-phosphatase A JBrowse link NW_004955477 10,148,032 10,384,361 RGD:9068941
G Inpp5e inositol polyphosphate-5-phosphatase E JBrowse link NW_004955513 4,304,483 4,313,087 RGD:9068941
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link NW_004955481 1,651,422 1,674,402 RGD:9068941
G Mtmr2 myotubularin related protein 2 JBrowse link NW_004955412 693,743 764,377 RGD:9068941
G Mtmr7 myotubularin related protein 7 JBrowse link NW_004955552 2,298,597 2,412,579 RGD:9068941
G Pten phosphatase and tensin homolog JBrowse link NW_004955425 5,007,811 5,091,829 RGD:9068941
G Synj1 synaptojanin 1 JBrowse link NW_004955407 32,094,076 32,175,676 RGD:9068941
G Synj2 synaptojanin 2 JBrowse link NW_004955439 4,305,630 4,400,775 RGD:9068941
insulin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ceacam1 CEA cell adhesion molecule 1 JBrowse link NW_004955555 426,894 446,235 RGD:9068941
G Ide insulin degrading enzyme JBrowse link NW_004955425 819,461 926,440 RGD:9068941
intestinal lipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnliprp2 pancreatic lipase related protein 2 JBrowse link NW_004955431 21,425,345 21,442,979 RGD:9068941
isoleucine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link NW_004955412 10,350,088 10,369,806 RGD:9068941
G Bcat2 branched chain amino acid transaminase 2 JBrowse link NW_004955559 1,785,253 1,796,838 RGD:9068941
ITP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itpa inosine triphosphatase JBrowse link NW_004955415 14,106,786 14,121,975 RGD:9068941
keratan sulfate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gns glucosamine (N-acetyl)-6-sulfatase JBrowse link NW_004955458 11,471,376 11,500,793 RGD:9068941
ketone body catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link NW_004955412 10,350,088 10,369,806 RGD:9068941
G Acat2 acetyl-CoA acetyltransferase 2 JBrowse link NW_004955439 21,123,886 21,142,562 RGD:9068941
G Oxct1 3-oxoacid CoA-transferase 1 JBrowse link NW_004955426 25,885,518 25,998,187 RGD:9068941
ketone catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Oxct1 3-oxoacid CoA-transferase 1 JBrowse link NW_004955426 25,885,518 25,998,187 RGD:9068941
L-alanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase JBrowse link NW_004955542 710,506 720,564 RGD:9068941
L-alanine catabolic process, by transamination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agxt2 alanine--glyoxylate aminotransferase 2 JBrowse link NW_004955426 20,102,368 20,142,596 RGD:9068941
L-cysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase JBrowse link NW_004955542 710,506 720,564 RGD:9068941
G Cbs cystathionine beta-synthase JBrowse link NW_004955407 38,924,355 38,939,790 RGD:9068941
G Cdo1 cysteine dioxygenase type 1 JBrowse link NW_004955408 35,593,981 35,605,189 RGD:9068941
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csad cysteine sulfinic acid decarboxylase JBrowse link NW_004955458 423,156 449,763 RGD:9068941
L-cysteine catabolic process to taurine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csad cysteine sulfinic acid decarboxylase JBrowse link NW_004955458 423,156 449,763 RGD:9068941
L-lysine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aass aminoadipate-semialdehyde synthase JBrowse link NW_004955479 3,746,003 3,805,835 RGD:9068941
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pipox pipecolic acid and sarcosine oxidase JBrowse link NW_004955481 4,128,503 4,225,027 RGD:9068941
L-phenylalanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Qdpr quinoid dihydropteridine reductase JBrowse link NW_004955480 6,646,088 6,666,866 RGD:9068941
L-serine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbs cystathionine beta-synthase JBrowse link NW_004955407 38,924,355 38,939,790 RGD:9068941
G Sds serine dehydratase JBrowse link NW_004955482 9,646,523 9,653,471 RGD:9068941
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link NW_004955478 10,972,791 11,001,535 RGD:9068941
L-xylitol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sord sorbitol dehydrogenase JBrowse link NW_004955409 8,305,819 8,333,733 RGD:9068941
lactate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ldhd lactate dehydrogenase D JBrowse link NW_004955484 2,461,545 2,466,702 RGD:9068941
late endosomal microautophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link NW_004955412 23,863,513 23,867,984 RGD:9068941
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link NW_004955484 7,368,938 7,375,964 RGD:9068941
G Vps4b vacuolar protein sorting 4 homolog B JBrowse link NW_004955402 47,154,350 47,183,979 RGD:9068941
leucine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ivd isovaleryl-CoA dehydrogenase JBrowse link NW_004955416 7,327,557 7,341,533 RGD:9068941
lipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adora1 adenosine A1 receptor JBrowse link NW_004955406 39,148,811 39,183,577 RGD:9068941
G Apoa4 apolipoprotein A4 JBrowse link NW_004955412 18,158,095 18,160,636 RGD:9068941
G Apob apolipoprotein B JBrowse link NW_004955469 3,437,422 3,478,408 RGD:9068941
G Hint2 histidine triad nucleotide binding protein 2 JBrowse link NW_004955472 500,845 503,067 RGD:9068941
G Ins insulin JBrowse link NW_004955422 13,909,408 13,910,419 RGD:9068941
G Irs1 insulin receptor substrate 1 JBrowse link NW_004955453 7,685,715 7,742,262 RGD:9068941
G Lipe lipase E, hormone sensitive type JBrowse link NW_004955555 511,085 531,165 RGD:9068941
G Liph lipase H JBrowse link NW_004955420 22,015,254 22,049,508 RGD:9068941
G Lipi lipase I JBrowse link NW_004955407 16,013,285 16,071,187 RGD:9068941
G Lpl lipoprotein lipase JBrowse link NW_004955403 43,646,084 43,672,116 RGD:9068941
G Pla2g1b phospholipase A2 group IB JBrowse link NW_004955455 11,308,848 11,316,245 RGD:9068941
G Plin1 perilipin 1 JBrowse link NW_004955416 15,538,309 15,549,275 RGD:9068941
G Ppt1 palmitoyl-protein thioesterase 1 JBrowse link NW_004955452 17,518,345 17,549,112 RGD:9068941
G Tbl1xr1 TBL1X receptor 1 JBrowse link NW_004955420 6,546,529 6,705,481 RGD:9068941
lipophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor JBrowse link NW_004955424 11,259,288 11,262,413 RGD:9068941
G Rab7a RAB7A, member RAS oncogene family JBrowse link NW_004955429 15,103,792 15,167,498 RGD:9068941
lipopolysaccharide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aoah acyloxyacyl hydrolase JBrowse link NW_004955460 6,750,851 6,954,185 RGD:9068941
lipoprotein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apob apolipoprotein B JBrowse link NW_004955469 3,437,422 3,478,408 RGD:9068941
G Apoe apolipoprotein E JBrowse link NW_004955555 1,998,170 2,002,003 RGD:9068941
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Ctsd cathepsin D JBrowse link NW_004955422 13,576,315 13,584,267 RGD:9068941
G Ldlr low density lipoprotein receptor JBrowse link NW_004955495 2,114,702 2,135,584 RGD:9068941
long-chain fatty acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link NW_004955580 459,715 475,363 RGD:9068941
G Acadl acyl-CoA dehydrogenase long chain JBrowse link NW_004955457 5,266,032 5,300,632 RGD:9068941
G Adtrp androgen dependent TFPI regulating protein JBrowse link NW_004955465 2,721,171 2,823,368 RGD:9068941
G Aig1 androgen induced 1 JBrowse link NW_004955436 17,056,630 17,285,022 RGD:9068941
G Lipe lipase E, hormone sensitive type JBrowse link NW_004955555 511,085 531,165 RGD:9068941
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot7 acyl-CoA thioesterase 7 JBrowse link NW_004955486 6,188,102 6,258,230 RGD:9068941
low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcsk9 proprotein convertase subtilisin/kexin type 9 JBrowse link NW_004955464 4,424,583 4,439,805 RGD:9068941
lysosomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc115 coiled-coil domain containing 115 JBrowse link NW_004955459 25,649 30,215 RGD:9068941
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link NW_004955493 6,696,520 6,707,849 RGD:9068941
G Lamp2 lysosomal associated membrane protein 2 JBrowse link NW_004955572 1,423,048 1,464,443 RGD:9068941
G Psap prosaposin JBrowse link NW_004955437 19,667,252 19,683,669 RGD:9068941
G Tmem199 transmembrane protein 199 JBrowse link NW_004955481 4,772,394 4,776,524 RGD:9068941
G Vps13a vacuolar protein sorting 13 homolog A JBrowse link NW_004955512 2,037,803 2,267,197 RGD:9068941
macroautophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acbd5 acyl-CoA binding domain containing 5 JBrowse link NW_004955429 2,623,042 2,661,182 RGD:9068941
G Atg14 autophagy related 14 JBrowse link NW_004955466 13,898,311 13,972,506 RGD:9068941
G Atg3 autophagy related 3 JBrowse link NW_004955427 12,881,454 12,906,399 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link NW_004955493 6,696,520 6,707,849 RGD:9068941
G Hdac10 histone deacetylase 10 JBrowse link NW_004955413 33,272,600 33,277,893 RGD:9068941
G Map1lc3a microtubule associated protein 1 light chain 3 alpha JBrowse link NW_004955422 26,774,466 26,776,024 RGD:9068941
G Map1lc3b microtubule associated protein 1 light chain 3 beta JBrowse link NW_004955541 1,852,388 1,868,194 RGD:9068941
G Map1lc3c microtubule associated protein 1 light chain 3 gamma JBrowse link NW_004955406 5,769,894 5,774,806 RGD:9068941
G Nbr1 NBR1 autophagy cargo receptor JBrowse link NW_004955451 16,871,091 16,896,090 RGD:9068941
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha JBrowse link NW_004955414 31,896,161 31,999,730 RGD:9068941
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta JBrowse link NW_004955406 40,247,690 40,317,556 RGD:9068941
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 JBrowse link NW_004955402 28,081,150 28,195,305 RGD:9068941
G Plaa phospholipase A2 activating protein JBrowse link NW_004955472 7,879,196 7,915,040 RGD:9068941
G Sqstm1 sequestosome 1 JBrowse link NW_004955408 757,426 764,989 RGD:9068941
G Tbc1d5 TBC1 domain family member 5 JBrowse link NW_004955430 9,411,865 9,966,710 RGD:9068941
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 JBrowse link NW_004955422 17,768,469 17,778,976 RGD:9068941
G Tmem74 transmembrane protein 74 JBrowse link NW_004955417 31,328,352 31,334,228 RGD:9068941
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 JBrowse link NW_004955422 26,640,239 26,649,291 RGD:9068941
G Ubqln1 ubiquilin 1 JBrowse link NW_004955432 3,575,034 3,617,029 RGD:9068941
G Ubxn6 UBX domain protein 6 JBrowse link NW_004955495 4,456,182 4,465,954 RGD:9068941
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link NW_004955482 760,200 777,133 RGD:9068941
G Vcp valosin containing protein JBrowse link NW_004955472 1,111,649 1,124,076 RGD:9068941
G Zfyve1 zinc finger FYVE-type containing 1 JBrowse link NW_004955523 2,334,175 2,388,612 RGD:9068941
maintenance of unfolded protein involved in ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag6 BAG cochaperone 6 JBrowse link NW_004955437 176,848 188,243 RGD:9068941
G Get4 guided entry of tail-anchored proteins factor 4 JBrowse link NW_004955460 8,620,913 8,634,778 RGD:9068941
G Usp13 ubiquitin specific peptidase 13 JBrowse link NW_004955420 8,835,858 8,919,837 RGD:9068941
malonate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsf3 acyl-CoA synthetase family member 3 JBrowse link NW_004955541 2,837,487 2,876,220 RGD:9068941
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link NW_004955421 8,196,631 8,225,561 RGD:9068941
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link NW_004955422 26,243,034 26,271,849 RGD:9068941
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 JBrowse link NW_004955406 23,329,400 23,401,282 RGD:9068941
G Man1b1 mannosidase alpha class 1B member 1