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ONTOLOGY REPORT - ANNOTATIONS

Term:phospholipid biosynthetic process
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Accession:GO:0008654 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a phospholipid, a lipid containing phosphoric acid as a mono- or diester.
Synonyms:exact_synonym: phospholipid anabolism;   phospholipid biosynthesis;   phospholipid formation;   phospholipid synthesis


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phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:122,000,241...122,026,447
Ensembl chr 8:122,000,389...122,026,447 		JBrowse link
G Acsl5 acyl-CoA synthetase long-chain family member 5 IGI RGD PMID:14711823 RGD:2312802 NCBI chr 1:254,289,513...254,336,608
Ensembl chr 1:254,292,521...254,336,607 		JBrowse link
G Acsl6 acyl-CoA synthetase long-chain family member 6 IMP RGD PMID:15655248 RGD:2312811 NCBI chr10:38,439,914...38,501,182
Ensembl chr10:38,440,080...38,498,757 		JBrowse link
G Adgrf5 adhesion G protein-coupled receptor F5 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:23590306)		 Ensembl
RGD		 PMID:23590306 GO_REF:0000107 NCBI chr 9:17,517,596...17,624,107
Ensembl chr 9:17,520,009...17,623,968 		JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578 		JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103 		JBrowse link
G ENSRNOG00000065266 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr  X:116,711,549...116,712,324 JBrowse link
G ENSRNOG00000070384 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr  X:116,677,939...116,679,354 JBrowse link
G Fgf7 fibroblast growth factor 7 IMP RGD PMID:11316745 RGD:68696 NCBI chr 3:113,280,448...113,333,279
Ensembl chr 3:113,281,283...113,332,929 		JBrowse link
G Fitm1 fat storage-inducing transmembrane protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,064,746...29,066,015
Ensembl chr15:29,064,707...29,066,015 		JBrowse link
G Fitm2 fat storage-inducing transmembrane protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:152,141,346...152,147,858
Ensembl chr 3:152,141,346...152,147,858 		JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 involved_in ISO
IEA		 (PMID:38693265)
GO_REF:0000107		 RGD
Ensembl		 PMID:38693265 GO_REF:0000107 NCBI chr13:102,586,263...102,608,647
Ensembl chr13:102,586,257...102,608,661 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361 		JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639 		JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:114,646,446...114,657,051
Ensembl chr 3:114,648,498...114,657,051 		JBrowse link
G Gpat3 glycerol-3-phosphate acyltransferase 3 involved_in ISO (MGI:6467919|PMID:11003606) RGD PMID:11003606 MGI:6467919 NCBI chr14:8,715,367...8,768,051
Ensembl chr14:8,714,373...8,766,490 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857438 (PMID:15198669)		 Ensembl
RGD		 PMID:15198669 GO_REF:0000107 NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223 		JBrowse link
G Isyna1 inositol-3-phosphate synthase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:18,839,143...18,841,979
Ensembl chr16:18,839,145...18,841,979 		JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16704971)
(MGI:3690244|PMID:16704971)		 UniProt
RGD		 PMID:16704971 GO_REF:0000024 MGI:3690244 NCBI chr 1:29,766,070...29,816,401
Ensembl chr 1:29,766,071...29,816,401 		JBrowse link
G Lpcat2b lysophosphatidylcholine acyltransferase 2b involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:2,338,564...2,341,972
Ensembl chr14:2,281,526...2,342,022 		JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880 		JBrowse link
G Mboat1 membrane bound O-acyltransferase domain containing 1 involved_in ISO (MGI:6436389|PMID:18287005)
(PMID:18287005)		 RGD PMID:18287005 MGI:6436389 NCBI chr17:34,331,413...34,445,088
Ensembl chr17:34,331,422...34,445,088 		JBrowse link
G Mboat2 membrane bound O-acyltransferase domain containing 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:41,471,135...41,597,599
Ensembl chr 6:41,471,161...41,593,485 		JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha involved_in ISO (PMID:15157668) RGD PMID:15157668 NCBI chr 2:182,628,299...182,671,584
Ensembl chr 2:182,628,300...182,671,598 		JBrowse link
G Plaat3 phospholipase A and acyltransferase 3 involved_in ISO (MGI:5315690|PMID:18614531)
(PMID:18614531)		 RGD PMID:18614531 MGI:5315690 NCBI chr 1:204,782,608...204,816,397
Ensembl chr 1:204,782,729...204,817,667 		JBrowse link
G Pld1 phospholipase D1 acts_upstream_of_or_within IMP PMID:18519738 MGI PMID:18519738 RGD:8554572 NCBI chr 2:110,849,205...111,047,304
Ensembl chr 2:110,893,608...111,047,692 		JBrowse link
G Ppard peroxisome proliferator-activated receptor delta IDA RGD PMID:17148578 RGD:2324892 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968 		JBrowse link
G Ptpmt1 protein tyrosine phosphatase, mitochondrial 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:76,889,922...76,899,427
Ensembl chr 3:76,889,922...76,899,427 		JBrowse link
G Serac1 serine active site containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:46,620,741...46,656,801
Ensembl chr 1:46,620,498...46,656,727 		JBrowse link
G Serinc1 serine incorporator 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:36,850,062...36,868,999
Ensembl chr20:36,850,076...36,896,691 		JBrowse link
G Serinc4 serine incorporator 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:108,428,896...108,434,778
Ensembl chr 3:108,428,897...108,434,778 		JBrowse link
G Serinc5 serine incorporator 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:23,846,899...23,950,346
Ensembl chr 2:23,846,900...23,950,346 		JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 acts_upstream_of_or_within ISO (PMID:12456676) RGD PMID:12456676 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:3716065 (PMID:19515693) RGD PMID:19515693 NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025 		JBrowse link
1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07028769.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26774281)		 UniProt
Ensembl
RGD		 PMID:26774281 GO_REF:0000024 GO_REF:0000107 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029 		JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO
IEA
ISS		 (PMID:26774281)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26774281 GO_REF:0000024 GO_REF:0000107 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938 		JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO
IEA
ISS		 (PMID:26774281)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26774281 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078 		JBrowse link
cardiolipin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crls1 cardiolipin synthase 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:16678169)		 UniProt
GO_Central
RGD		 PMID:16678169 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:120,119,822...120,138,674
Ensembl chr 3:120,119,852...120,138,655 		JBrowse link
G Pgs1 phosphatidylglycerophosphate synthase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,214,635...103,250,254
Ensembl chr10:103,214,646...103,250,254 		JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISO
IEA		 (PMID:19164547)
GO_REF:0000107		 RGD
Ensembl		 PMID:19164547 GO_REF:0000107 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114 		JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in ISO
IEA
ISS		 (PMID:16939411)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:16939411 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,566,556...54,573,240
Ensembl chr10:54,566,873...54,578,709 		JBrowse link
G Ptpmt1 protein tyrosine phosphatase, mitochondrial 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21641550)
(MGI:5288296|PMID:21641550)		 UniProt
RGD		 PMID:21641550 GO_REF:0000024 MGI:5288296 NCBI chr 3:76,889,922...76,899,427
Ensembl chr 3:76,889,922...76,899,427 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000107		 RGD
Ensembl		 PMID:19523918 GO_REF:0000107 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:11118295), (PMID:16873891), (PMID:17043667), (PMID:19164547) RGD PMID:11118295 PMID:16873891 PMID:17043667 PMID:19164547 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001 		JBrowse link
G Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,070,388...148,103,728
Ensembl chr 4:148,018,463...148,103,694 		JBrowse link
CDP-choline pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cept1 choline/ethanolamine phosphotransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578 		JBrowse link
G Chka choline kinase alpha involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000108
GO_REF:0000033
(MGI:3695773|PMID:16861741)		 GOC
GO_Central
RGD		 PMID:16861741 GO_REF:0000033 GO_REF:0000108 MGI:3695773 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Chkb choline kinase beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:120,500,960...120,504,359
Ensembl chr 7:120,500,984...120,504,461 		JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103 		JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in IDA
ISO		 PMID:19783652
(PMID:12842190)
(MGI:2667298|PMID:12842190)
PMID:8185307
(PMID:10480912)
PMID:8381041		 RGD PMID:10480912 PMID:12842190 PMID:19783652 PMID:8185307 PMID:8381041 MGI:2667298, RGD:8553740, RGD:39458015, RGD:729578 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357 		JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12842190)
GO_REF:0000002
(MGI:2667298|PMID:12842190)
GO_REF:0000024
(PMID:10480912)		 Ensembl
RGD
InterPro
UniProt		 PMID:10480912 PMID:12842190 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 MGI:2667298 NCBI chr  X:58,378,090...58,471,623
Ensembl chr  X:58,378,116...58,468,935 		JBrowse link
G Phka1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:67,601,302...67,738,504
Ensembl chr  X:67,601,302...67,738,455 		JBrowse link
CDP-diacylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agpat4 1-acylglycerol-3-phosphate O-acyltransferase 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:48,525,131...48,633,798
Ensembl chr 1:48,527,323...48,633,345 		JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
(PMID:8863531)
GO_REF:0000041
(PMID:25375833), (PMID:9407135)		 UniProt
RGD		 PMID:8863531 PMID:9407135 PMID:25375833 GO_REF:0000024 GO_REF:0000041 NCBI chr14:7,820,328...7,882,943
Ensembl chr14:7,820,351...7,882,681 		JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 involved_in ISO
ISS
IEA		 (PMID:25375833)
GO_REF:0000024
GO_REF:0000041		 RGD
UniProt		 PMID:25375833 GO_REF:0000024 GO_REF:0000041 NCBI chr 3:119,514,963...119,553,555
Ensembl chr 3:119,515,000...119,553,541 		JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639 		JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:114,646,446...114,657,051
Ensembl chr 3:114,648,498...114,657,051 		JBrowse link
G Gpat3 glycerol-3-phosphate acyltransferase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:8,715,367...8,768,051
Ensembl chr14:8,714,373...8,766,490 		JBrowse link
G Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr 4:148,070,388...148,103,728
Ensembl chr 4:148,018,463...148,103,694 		JBrowse link
ceramide phosphoethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within ISO (PMID:25667419) RGD PMID:25667419 NCBI chr15:2,512,104...2,562,368
Ensembl chr15:2,512,105...2,515,379
Ensembl chr15:2,512,105...2,515,379 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:25667419)		 Ensembl
RGD		 PMID:25667419 GO_REF:0000107 NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546 		JBrowse link
dimethylallyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000062441 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 Ensembl chr17:61,602,519...61,608,185 JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,629,592...61,637,357
Ensembl chr17:61,629,594...61,637,357 		JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,331,385...61,334,987
Ensembl chr17:61,331,669...61,334,285 		JBrowse link
G Idi2-ps1 isopentenyl-diphosphate delta isomerase 2, pseudogene 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,420,357...61,423,924 JBrowse link
G Idi2l2 isopentenyl-diphosphate delta isomerase 2 like 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,372,853...61,386,459
Ensembl chr17:61,373,678...61,386,454 		JBrowse link
G Idi2l3 isopentenyl-diphosphate delta isomerase 2 like 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,518,138...61,535,484
Ensembl chr17:61,519,390...61,531,603 		JBrowse link
G LOC102550988 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,451,920...61,457,799
Ensembl chr17:61,451,918...61,458,215 		JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,504,294...61,507,015
Ensembl chr17:61,504,535...61,507,015 		JBrowse link
G LOC120097764 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,338,622...61,349,795
Ensembl chr17:61,347,251...61,349,795
Ensembl chr17:61,347,251...61,349,795 		JBrowse link
G LOC134482631 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041
G LOC134482634 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041
G LOC134482635 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041
G LOC134482779 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041
G LOC134482866 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041
G LOC134484812 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041
dolichyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490), (PMID:32817466), (PMID:33077723) RGD PMID:28842490 PMID:32817466 PMID:33077723 NCBI chr 5:146,198,359...146,224,479
Ensembl chr 5:146,197,457...146,224,454 		JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490), (PMID:32817466) RGD PMID:28842490 PMID:32817466 NCBI chr20:31,811,817...31,838,562
Ensembl chr20:31,811,817...31,838,561 		JBrowse link
dolichyl monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dolk dolichol kinase involved_in IBA
ISO		 GO_REF:0000033
(PMID:12213788), (PMID:16923818), (PMID:22242004)		 GO_Central
RGD		 PMID:12213788 PMID:16923818 PMID:22242004 GO_REF:0000033 NCBI chr 3:13,557,826...13,559,864
Ensembl chr 3:13,557,817...13,559,917 		JBrowse link
farnesyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdps farnesyl diphosphate synthase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:8188698 GO_REF:0000033 GO_REF:0000041, RGD:2316305 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776 		JBrowse link
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220 		JBrowse link
farnesyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130 		JBrowse link
geranyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdps farnesyl diphosphate synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776 		JBrowse link
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220 		JBrowse link
geranylgeranyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220 		JBrowse link
glycerophospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO (PMID:15870270) RGD PMID:15870270 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:17482562) RGD PMID:17482562 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
G Etnk2 ethanolamine kinase 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr13:44,811,012...44,829,052
Ensembl chr13:44,811,015...44,829,037 		JBrowse link
G Far1 fatty acyl CoA reductase 1 involved_in ISO
IEA		 (PMID:20071337)
GO_REF:0000107		 RGD
Ensembl		 PMID:20071337 GO_REF:0000107 NCBI chr 1:167,644,622...167,705,868
Ensembl chr 1:167,644,677...167,705,730 		JBrowse link
G Hdhd5 haloacid dehalogenase like hydrolase domain containing 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:153,701,026...153,753,303
Ensembl chr 4:153,718,791...153,753,277 		JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07038703.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr  X:54,564,018...54,565,271 JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:34,754,279...34,800,530
Ensembl chr14:34,754,289...34,800,814 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:10835346), (PMID:9535917)
(PMID:9535917)
GO_REF:0000033
(PMID:9535917), (PMID:9724629)		 RGD
GO_Central		 PMID:9535917 PMID:9724629 PMID:10835346 GO_REF:0000033 NCBI chr 3:156,919,979...156,939,522
Ensembl chr 3:156,919,979...156,939,536 		JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in
acts_upstream_of_or_within		 TAS
IBA
IEA
ISO
IDA		 GO_REF:0000033
GO_REF:0000107
(PMID:10835346), (PMID:16162815)
PMID:9724629		 GO_Central
Ensembl
RGD		 PMID:10835346 PMID:16162815 PMID:9724629 PMID:9724629 GO_REF:0000033 GO_REF:0000107, RGD:69827, RGD:69827 NCBI chr 3:15,855,952...15,858,867
Ensembl chr 3:15,856,182...15,869,165
Ensembl chr 3:15,856,182...15,869,165 		JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in ISO
IBA		 (PMID:10835346)
GO_REF:0000033		 RGD
GO_Central		 PMID:10835346 GO_REF:0000033 NCBI chr 2:174,676,532...174,677,047
Ensembl chr 2:174,676,363...174,677,668
Ensembl chr15:174,676,363...174,677,668 		JBrowse link
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 TAS RGD PMID:10702226 RGD:1331364 NCBI chr 7:108,051,896...108,055,479
Ensembl chr 7:108,051,861...108,055,484 		JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000043
(PMID:29374258)		 UniProt
RGD		 PMID:29374258 GO_REF:0000024 GO_REF:0000043 NCBI chr18:60,763,418...60,781,553
Ensembl chr18:60,763,419...60,781,553 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 IMP RGD PMID:14734546 RGD:1303970 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464 		JBrowse link
G Pgap2 post-GPI attachment to proteins 2 involved_in IMP
IBA
IEA
ISO		 PMID:16407401
GO_REF:0000033
GO_REF:0000043
(PMID:29374258)		 GO_Central
UniProt
RGD		 PMID:29374258 PMID:16407401 GO_REF:0000033 GO_REF:0000043, RGD:8553507 NCBI chr 1:156,591,540...156,618,116
Ensembl chr 1:156,591,615...156,618,114 		JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in ISO
IBA		 (PMID:29374258)
GO_REF:0000033		 RGD
GO_Central		 PMID:29374258 GO_REF:0000033 NCBI chr10:83,387,113...83,399,357
Ensembl chr10:83,387,113...83,398,628 		JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:29374258)		 UniProt
GO_Central
RGD		 PMID:29374258 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:63,931,916...63,947,004
Ensembl chr 5:63,930,682...63,951,716 		JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis, class A involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000041
MGI:3652879 (PMID:8611683)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:8611683 GO_REF:0000033 GO_REF:0000041 NCBI chr  X:30,043,033...30,055,861
Ensembl chr  X:30,042,343...30,055,804 		JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis, class B involved_in ISO
IBA		 (PMID:8861954)
GO_REF:0000033		 RGD
GO_Central		 PMID:8861954 GO_REF:0000033 NCBI chr 8:73,751,756...73,775,679
Ensembl chr 8:73,751,798...73,775,679 		JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis, class C involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000041
(PMID:16162815), (PMID:27694521)		 UniProt
RGD		 PMID:16162815 PMID:27694521 GO_REF:0000024 GO_REF:0000041 NCBI chr13:74,343,619...74,346,148
Ensembl chr13:74,296,854...74,346,211 		JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis, class F involved_in ISO
IBA
IEA		 (PMID:33386993)
(PMID:10781593)
GO_REF:0000033
GO_REF:0000041
(MGI:1860649|PMID:10781593)		 RGD
GO_Central
UniProt		 PMID:10781593 PMID:33386993 GO_REF:0000033 GO_REF:0000041 MGI:1860649 NCBI chr 6:7,589,584...7,617,719
Ensembl chr 6:7,589,570...7,639,675 		JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis, class G acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15632136)
GO_REF:0000041		 RGD
UniProt		 PMID:15632136 GO_REF:0000041 NCBI chr14:1,404,911...1,433,199
Ensembl chr14:1,406,798...1,433,187 		JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis, class H involved_in ISO
IBA
IEA		 (PMID:16162815)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:16162815 GO_REF:0000033 GO_REF:0000041 NCBI chr 6:97,874,903...97,897,188
Ensembl chr 6:97,882,903...97,897,142 		JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis, class L IDA RGD PMID:9188481 RGD:729509 NCBI chr10:47,142,160...47,199,892
Ensembl chr10:47,141,780...47,200,145 		JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis, class M involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:11226175 GO_REF:0000033 GO_REF:0000041, RGD:70624 NCBI chr13:84,838,329...84,842,026
Ensembl chr13:84,838,175...84,843,381 		JBrowse link
G Pign phosphatidylinositol glycan anchor biosynthesis, class N involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr13:21,659,092...21,812,932
Ensembl chr13:21,662,455...21,806,790 		JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis, class O involved_in ISO
IBA
IEA		 (MGI:1860649|PMID:10781593)
(PMID:10781593)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:10781593 GO_REF:0000033 GO_REF:0000041 MGI:1860649 NCBI chr 5:57,244,721...57,256,252
Ensembl chr 5:57,245,166...57,254,146 		JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis, class P involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:16162815), (PMID:28334793)
(PMID:10944123)
GO_REF:0000033		 RGD
GO_Central		 PMID:10944123 PMID:16162815 PMID:28334793 GO_REF:0000033 NCBI chr11:33,682,943...33,689,111
Ensembl chr11:33,682,948...33,689,321 		JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis, class Q involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:16162815)
PomBase:SPBC30D10.11|SGD:S000003448 (PMID:10373468), (PMID:9729469)
GO_REF:0000033		 RGD
GO_Central		 PMID:9729469 PMID:10373468 PMID:16162815 GO_REF:0000033 NCBI chr10:14,942,571...14,958,584
Ensembl chr10:14,942,577...14,958,584 		JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U involved_in ISO (PMID:15034568) RGD PMID:15034568 NCBI chr 3:143,784,831...143,881,268
Ensembl chr 3:143,784,832...143,880,807 		JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis, class V involved_in ISO
IBA
IEA		 UniProtKB:P38211 (PMID:15623507), (PMID:15720390)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:15623507 PMID:15720390 GO_REF:0000033 GO_REF:0000041 NCBI chr 5:145,889,642...145,901,533
Ensembl chr 5:145,889,646...145,901,533 		JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis, class W involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr10:69,746,996...69,782,656
Ensembl chr10:69,748,789...69,790,475 		JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis, class X involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr11:68,687,126...68,703,067
Ensembl chr11:68,687,093...68,703,472 		JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis, class Y acts_upstream_of_or_within ISO (PMID:16162815) RGD PMID:16162815 NCBI chr 8:20,689,621...20,691,863
Ensembl chr 8:20,689,502...20,692,585 		JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis, class Z involved_in ISO UniProtKB:Q04174 (PMID:15208306) RGD PMID:15208306 NCBI chr11:68,831,847...68,851,798 JBrowse link
G Slc30a5 solute carrier family 30 member 5 acts_upstream_of_positive_effect ISO (PMID:35525268) RGD PMID:35525268 NCBI chr 2:31,945,745...31,975,969
Ensembl chr 2:31,945,729...31,975,934 		JBrowse link
isopentenyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,629,592...61,637,357
Ensembl chr17:61,629,594...61,637,357 		JBrowse link
G Idi2l2 isopentenyl-diphosphate delta isomerase 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,372,853...61,386,459
Ensembl chr17:61,373,678...61,386,454 		JBrowse link
G Idi2l3 isopentenyl-diphosphate delta isomerase 2 like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,518,138...61,535,484
Ensembl chr17:61,519,390...61,531,603 		JBrowse link
G LOC102550988 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,451,920...61,457,799
Ensembl chr17:61,451,918...61,458,215 		JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,504,294...61,507,015
Ensembl chr17:61,504,535...61,507,015 		JBrowse link
G LOC134482779 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482866 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000104
GO_REF:0000002		 GO_Central
UniProt
InterPro
RGD		 PMID:197206 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104, RGD:2316852 NCBI chr19:50,496,366...50,506,429
Ensembl chr19:50,496,367...50,507,971 		JBrowse link
G Mvk mevalonate kinase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:197206 GO_REF:0000033 GO_REF:0000041, RGD:2316852 NCBI chr12:42,141,391...42,158,893
Ensembl chr12:42,141,384...42,158,882 		JBrowse link
G Pmvk phosphomevalonate kinase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:197206 GO_REF:0000033 GO_REF:0000041, RGD:2316852 NCBI chr 2:174,876,586...174,886,365
Ensembl chr 2:174,876,657...174,886,364 		JBrowse link
negative regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpin1 lipin 1 IMP RGD PMID:21715287 RGD:38599010 NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097 		JBrowse link
negative regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of_or_within ISO (PMID:20018880) RGD PMID:20018880 NCBI chr 1:29,766,070...29,816,401
Ensembl chr 1:29,766,071...29,816,401 		JBrowse link
negative regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:2538439)		 UniProt
Ensembl
RGD		 PMID:2538439 GO_REF:0000024 GO_REF:0000107 NCBI chr12:15,645,549...15,667,056
Ensembl chr12:15,645,541...15,666,497 		JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:2538439)		 UniProt
Ensembl
RGD		 PMID:2538439 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
negative regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in IMP
IEA
ISO		 PMID:24201375
GO_REF:0000107
(PMID:24201375)		 Ensembl
RGD		 PMID:24201375 PMID:24201375 GO_REF:0000107, RGD:14697729 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537 		JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325 		JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000107		 RGD
Ensembl		 PMID:19523918 GO_REF:0000107 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:27,697,384...27,716,013
Ensembl chr15:27,704,113...27,716,966 		JBrowse link
G Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase involved_in ISO
IBA
IEA
ISS		 (PMID:18606822)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:18606822 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:122,000,241...122,026,447
Ensembl chr 8:122,000,389...122,026,447 		JBrowse link
G Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:9212163)
(PMID:9299423)
GO_REF:0000033		 RGD
GO_Central		 PMID:9212163 PMID:9299423 GO_REF:0000033 NCBI chr20:4,135,955...4,144,880
Ensembl chr20:4,135,957...4,145,278 		JBrowse link
G Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 involved_in ISO
IBA		 (PMID:9212163)
GO_REF:0000033		 RGD
GO_Central		 PMID:9212163 GO_REF:0000033 NCBI chr 3:9,416,837...9,428,567
Ensembl chr 3:9,416,843...9,428,371 		JBrowse link
G Dgka diacylglycerol kinase, alpha involved_in ISO
IBA
IEA
ISS		 (PMID:15544348), (PMID:2175712), (PMID:22627129)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(PMID:23949095)		 RGD
GO_Central
Ensembl
UniProt		 PMID:2175712 PMID:15544348 PMID:22627129 PMID:23949095 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:1,148,734...1,175,324
Ensembl chr 7:1,148,735...1,175,110 		JBrowse link
G Dgkb diacylglycerol kinase, beta involved_in IDA
IBA		 PMID:23949095
GO_REF:0000033		 GO_Central PMID:23949095 GO_REF:0000033, RGD:30309912 NCBI chr 6:54,640,948...55,397,210
Ensembl chr 6:54,641,614...55,397,043 		JBrowse link
G Dgkd diacylglycerol kinase, delta involved_in ISO
IBA		 (PMID:17880279), (PMID:23949095)
GO_REF:0000033		 RGD
GO_Central		 PMID:17880279 PMID:23949095 GO_REF:0000033 NCBI chr 9:88,516,686...88,607,349
Ensembl chr 9:88,516,715...88,607,345 		JBrowse link
G Dgke diacylglycerol kinase epsilon involved_in ISO (PMID:15544348), (PMID:19744926), (PMID:22108654) RGD PMID:15544348 PMID:19744926 PMID:22108654 NCBI chr10:73,853,030...73,877,334
Ensembl chr10:73,855,583...73,877,100 		JBrowse link
G Dgkg diacylglycerol kinase, gamma involved_in ISO
IBA
ISS		 (PMID:8034597)
(PMID:32033984)
GO_REF:0000033
(MGI:6431961|PMID:32033984)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:8034597 PMID:32033984 GO_REF:0000024 GO_REF:0000033 MGI:6431961 NCBI chr11:78,384,212...78,579,158
Ensembl chr11:78,384,458...78,577,212 		JBrowse link
G Dgkh diacylglycerol kinase, eta involved_in ISO
IBA		 (MGI:6253974|PMID:27643686)
(PMID:27643686)
GO_REF:0000033		 RGD
GO_Central		 PMID:27643686 GO_REF:0000033 MGI:6253974 NCBI chr15:53,981,079...54,150,470
Ensembl chr15:53,991,481...54,150,706 		JBrowse link
G Dgki diacylglycerol kinase, iota involved_in IDA
IBA		 PMID:15024004
GO_REF:0000033		 GO_Central PMID:15024004 GO_REF:0000033, RGD:1302915 NCBI chr 4:65,410,878...65,872,733
Ensembl chr 4:65,420,108...65,872,733 		JBrowse link
G Dgkk diacylglycerol kinase kappa involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:15,581,991...15,713,814
Ensembl chr  X:15,583,572...15,712,987 		JBrowse link
G Dgkq diacylglycerol kinase, theta involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:22732145), (PMID:23610160), (PMID:23767959), (PMID:23949095), (PMID:9099683)		 UniProt
GO_Central
RGD		 PMID:9099683 PMID:22732145 PMID:23610160 PMID:23767959 PMID:23949095 GO_REF:0000024 GO_REF:0000033 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131 		JBrowse link
G Dgkz diacylglycerol kinase zeta involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(MGI:2672999|PMID:12883552), (MGI:6201900|PMID:27739494)
(PMID:15544348), (PMID:19744926)		 UniProt
GO_Central
Ensembl
RGD		 PMID:12883552 PMID:15544348 PMID:19744926 PMID:27739494 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:2672999 MGI:6201900 NCBI chr 3:77,904,149...77,946,114
Ensembl chr 3:77,904,150...77,946,099 		JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in IMP PMID:22905194 UniProt PMID:22905194 RGD:30309909 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639 		JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in ISS
ISO		 GO_REF:0000024
(MGI:6228436|PMID:22905194)		 UniProt
RGD		 PMID:22905194 GO_REF:0000024 MGI:6228436 NCBI chr 3:114,646,446...114,657,051
Ensembl chr 3:114,648,498...114,657,051 		JBrowse link
G Pld1 phospholipase D1 involved_in
acts_upstream_of_or_within		 IEA
IMP		 GO_REF:0000002
PMID:18519738		 InterPro PMID:18519738 GO_REF:0000002, RGD:8554572 NCBI chr 2:110,849,205...111,047,304
Ensembl chr 2:110,893,608...111,047,692 		JBrowse link
G Pld2 phospholipase D2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:55,256,326...55,274,192
Ensembl chr10:55,256,359...55,272,808 		JBrowse link
G Pnpla3 patatin-like phospholipase domain containing 3 involved_in ISO (PMID:22560221)
(MGI:5426312|PMID:22560221)		 RGD PMID:22560221 MGI:5426312 NCBI chr 7:115,293,538...115,314,077
Ensembl chr 7:115,293,538...115,314,077 		JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 acts_upstream_of_or_within ISO (PMID:12456676) RGD PMID:12456676 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000107		 RGD
Ensembl		 PMID:19523918 GO_REF:0000107 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in ISO
IEA		 (PMID:4335615)
GO_REF:0000107		 RGD
Ensembl		 PMID:4335615 GO_REF:0000107 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) RGD PMID:14967812 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355 		JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:20018880)
(PMID:10191259), (PMID:37137909)		 RGD PMID:10191259 PMID:20018880 PMID:37137909 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578 		JBrowse link
G Chka choline kinase alpha involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:19915674), (PMID:23416529)
(PMID:16371353)
(PMID:34077757)		 UniProt
RGD		 PMID:16371353 PMID:19915674 PMID:23416529 PMID:34077757 GO_REF:0000024 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Chkb choline kinase beta acts_upstream_of_or_within ISO MGI:3578417 (PMID:16371353) RGD PMID:16371353 NCBI chr 7:120,500,960...120,504,359
Ensembl chr 7:120,500,984...120,504,461 		JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:10893425)
(PMID:20018880)		 RGD PMID:10893425 PMID:20018880 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103 		JBrowse link
G Dhrs7b dehydrogenase/reductase 7B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:28930673)		 Ensembl
RGD		 PMID:28930673 GO_REF:0000107 NCBI chr10:45,504,344...45,537,094
Ensembl chr10:45,504,426...45,537,076 		JBrowse link
G Fabp5 fatty acid binding protein 5 acts_upstream_of_or_within ISO MGI:95476 (PMID:15164767) RGD PMID:15164767 NCBI chr 2:91,765,056...91,768,716
Ensembl chr 2:91,765,056...91,853,773 		JBrowse link
G Fgf7 fibroblast growth factor 7 IMP surfactant disaturated phosphatidylcholine (DSPC) synthesis RGD PMID:11316745 RGD:68696 NCBI chr 3:113,280,448...113,333,279
Ensembl chr 3:113,281,283...113,332,929 		JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 involved_in ISO (PMID:18238778) RGD PMID:18238778 NCBI chr16:68,819,031...68,852,903
Ensembl chr16:68,819,079...68,852,901 		JBrowse link
G Lcat lecithin cholesterol acyltransferase involved_in ISO
IEA		 (PMID:11966470), (PMID:12354767)
GO_REF:0000107		 RGD
Ensembl		 PMID:11966470 PMID:12354767 GO_REF:0000107 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231 		JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of ISO (PMID:20018880) RGD PMID:20018880 NCBI chr 1:29,766,070...29,816,401
Ensembl chr 1:29,766,071...29,816,401 		JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880 		JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in
acts_upstream_of_or_within		 TAS
IDA
ISO
IMP		 PMID:24275660
MGI:2176050|MGI:3027956 (PMID:11829742), (PMID:15798219)
(MGI:2667298|PMID:12842190)
PMID:8381041
PMID:8185307
(PMID:10480912)		 RGD PMID:10480912 PMID:11829742 PMID:12842190 PMID:15798219 PMID:2166941 More... MGI:2667298, RGD:70012, RGD:405866193, RGD:729578, RGD:39458015, RGD:729598 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357 		JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in ISO
ISS		 (PMID:10480912)
(MGI:2667298|PMID:12842190)
GO_REF:0000024		 RGD
UniProt		 PMID:10480912 PMID:12842190 GO_REF:0000024 MGI:2667298 NCBI chr  X:58,378,090...58,471,623
Ensembl chr  X:58,378,116...58,468,935 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:8344945 GO_REF:0000033 GO_REF:0000041, RGD:729486 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Phka1 phosphorylase kinase regulatory subunit alpha 1 TAS RGD PMID:12401806 RGD:724642 NCBI chr  X:67,601,302...67,738,504
Ensembl chr  X:67,601,302...67,738,455 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000107		 RGD
Ensembl		 PMID:19523918 GO_REF:0000107 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
phosphatidylethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5436199|PMID:22503541)		 UniProt
Ensembl
RGD		 PMID:22503541 GO_REF:0000024 GO_REF:0000107 MGI:5436199 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874 		JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 involved_in IEA
ISO
IBA		 GO_REF:0000041
(PMID:10191259)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:10191259 GO_REF:0000033 GO_REF:0000041 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578 		JBrowse link
G Chka choline kinase alpha involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:19915674)
GO_REF:0000041		 UniProt
GO_Central
Ensembl
RGD		 PMID:19915674 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Chkb choline kinase beta involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000041
(PMID:19915674)		 UniProt
GO_Central
RGD		 PMID:19915674 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr 7:120,500,960...120,504,359
Ensembl chr 7:120,500,984...120,504,461 		JBrowse link
G Etnk1 ethanolamine kinase 1 involved_in ISO
IBA		 (PMID:11044454)
GO_REF:0000033		 RGD
GO_Central		 PMID:11044454 GO_REF:0000033 NCBI chr 4:176,126,056...176,170,325
Ensembl chr 4:176,126,180...176,193,770 		JBrowse link
G Etnk2 ethanolamine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000041
MGI:3526407 (PMID:16861741)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:16861741 GO_REF:0000033 GO_REF:0000041 NCBI chr13:44,811,012...44,829,052
Ensembl chr13:44,811,015...44,829,037 		JBrowse link
G Pcyt2 phosphate cytidylyltransferase 2, ethanolamine involved_in TAS
IBA
ISO
IEA
ISS		 GO_REF:0000033
(MGI:3709941|PMID:17325045)
GO_REF:0000041
GO_REF:0000024
(PMID:31637422)		 GO_Central
RGD
UniProt		 PMID:17325045 PMID:31637422 PMID:10493918 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 MGI:3709941, RGD:633525 NCBI chr10:105,888,769...105,896,182
Ensembl chr10:105,888,775...105,896,172 		JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000041
(PMID:30488656), (PMID:30858161)		 UniProt
GO_Central
RGD		 PMID:30488656 PMID:30858161 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr14:77,941,927...77,991,021
Ensembl chr14:77,941,948...77,991,003 		JBrowse link
G Selenoi selenoprotein I involved_in ISO
IBA		 (PMID:17132865), (PMID:28052917), (PMID:29500230)
GO_REF:0000033		 RGD
GO_Central		 PMID:17132865 PMID:28052917 PMID:29500230 GO_REF:0000033 NCBI chr 6:26,073,127...26,111,326
Ensembl chr 6:26,072,648...26,111,314 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000107		 RGD
Ensembl		 PMID:19523918 GO_REF:0000107 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
phosphatidylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in ISO
ISS
IEA		 (PMID:19075029)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:19075029 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) RGD PMID:19523918 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:8110188), (PMID:9407135)		 GO_Central
Ensembl
RGD		 PMID:8110188 PMID:9407135 PMID:8804431 PMID:7998949 GO_REF:0000033 GO_REF:0000107, RGD:724663, RGD:1626301 NCBI chr 1:181,583,098...181,587,409
Ensembl chr 1:181,583,141...181,587,408 		JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9407135)		 UniProt
RGD		 PMID:9407135 GO_REF:0000024 NCBI chr14:7,820,328...7,882,943
Ensembl chr14:7,820,351...7,882,681 		JBrowse link
G Dgke diacylglycerol kinase epsilon involved_in ISO (MGI:6414743|PMID:19744926) RGD PMID:19744926 MGI:6414743 NCBI chr10:73,853,030...73,877,334
Ensembl chr10:73,855,583...73,877,100 		JBrowse link
G Impa1 inositol monophosphatase 1 involved_in IMP
ISO		 (PMID:1377913) RGD PMID:1377913 PMID:11853098 RGD:2302239 NCBI chr 2:91,462,781...91,484,057
Ensembl chr 2:91,462,799...91,484,313 		JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21624956)		 Ensembl
RGD		 PMID:21624956 GO_REF:0000107 NCBI chr 1:156,183,043...156,197,500
Ensembl chr 1:156,183,059...156,197,500 		JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 involved_in ISO (PMID:18094042) RGD PMID:18094042 NCBI chr 1:65,525,206...65,539,538
Ensembl chr 1:65,525,213...65,539,538 		JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha involved_in ISO
ISS		 (PMID:11279162)
GO_REF:0000024		 RGD
UniProt		 PMID:11279162 GO_REF:0000024 NCBI chr 1:240,902,804...240,929,234
Ensembl chr 1:240,902,855...240,929,337 		JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma NAS RGD PMID:9685379 RGD:633581 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078 		JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1298224 (PMID:20622009)
GO_REF:0000107		 RGD
Ensembl		 PMID:20622009 GO_REF:0000107 NCBI chr 2:182,628,299...182,671,584
Ensembl chr 2:182,628,300...182,671,598 		JBrowse link
G Pip5k1b phosphatidylinositol-4-phosphate 5-kinase type 1 beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1298224 (PMID:20622009)
GO_REF:0000107		 RGD
Ensembl		 PMID:20622009 GO_REF:0000107 NCBI chr 1:221,907,220...222,183,672
Ensembl chr 1:221,914,159...222,183,672 		JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma acts_upstream_of_or_within ISO MGI:3054978 (PMID:20622009) RGD PMID:20622009 NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988 		JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:11606584), (PMID:12181444)		 Ensembl
UniProt
RGD		 PMID:11606584 PMID:12181444 GO_REF:0000024 GO_REF:0000107 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930 		JBrowse link
G Sh3yl1 SH3 and SYLF domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21624956)		 Ensembl
RGD		 PMID:21624956 GO_REF:0000107 NCBI chr 6:47,522,098...47,565,858
Ensembl chr 6:47,522,091...47,565,858 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000107		 RGD
Ensembl		 PMID:19523918 GO_REF:0000107 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
G Vac14 VAC14 component of PIKFYVE complex involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:38,590,569...38,691,911
Ensembl chr19:38,590,569...38,691,909 		JBrowse link
phosphatidylinositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bpnt1 3'(2'), 5'-bisphosphate nucleotidase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:96,865,634...96,893,506
Ensembl chr13:96,868,580...96,893,503 		JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:17,775,684...17,802,570
Ensembl chr 5:17,772,608...17,802,570 		JBrowse link
G Cish cytokine inducible SH2-containing protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:107,972,306...107,977,254
Ensembl chr 8:107,972,306...107,977,250 		JBrowse link
G Efr3b EFR3 homolog B involved_in ISO (PMID:23229899) RGD PMID:23229899 NCBI chr 6:26,947,436...27,021,113
Ensembl chr 6:26,948,540...27,020,933 		JBrowse link
G Hycc1 hyccin PI4KA lipid kinase complex subunit 1 involved_in ISO
IBA		 (PMID:26571211)
GO_REF:0000033		 RGD
GO_Central		 PMID:26571211 GO_REF:0000033 NCBI chr 4:11,132,224...11,239,120
Ensembl chr 4:11,132,385...11,239,113 		JBrowse link
G Hycc2 hyccin PI4KA lipid kinase complex subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:60,056,883...60,129,176
Ensembl chr 9:60,056,890...60,093,007 		JBrowse link
G Impa1 inositol monophosphatase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:91,462,781...91,484,057
Ensembl chr 2:91,462,799...91,484,313 		JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:60,834,206...60,867,575
Ensembl chr18:60,834,246...60,865,641 		JBrowse link
G Inpp1 inositol polyphosphate-1-phosphatase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:48,688,037...48,717,793
Ensembl chr 9:48,669,901...48,717,793 		JBrowse link
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:10574768)		 UniProt
GO_Central
RGD		 PMID:10574768 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:108,693,068...108,737,278 JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in ISO
IBA
IEA		 (PMID:10574768)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10574768 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:109,483,843...109,510,172
Ensembl chr 8:109,484,310...109,510,166 		JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:5,223,863...5,245,443
Ensembl chr20:5,224,120...5,245,428 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in ISS
ISO		 GO_REF:0000024
(PMID:12747803), (PMID:1847047)		 UniProt
RGD		 PMID:1847047 PMID:12747803 GO_REF:0000024 NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in ISS
ISO		 GO_REF:0000024
(PMID:12747803)		 UniProt
RGD		 PMID:12747803 GO_REF:0000024 NCBI chr13:92,069,160...92,164,281
Ensembl chr13:92,069,216...92,162,004 		JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11085927), (PMID:12747803)		 UniProt
Ensembl
RGD		 PMID:11085927 PMID:12747803 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:82,500,957...82,522,533
Ensembl chr 1:82,500,957...82,522,779 		JBrowse link
G P3r3urf PIK3R3 upstream open reading frame involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:129,656,654...129,673,140
Ensembl chr 5:129,656,833...129,672,848 		JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha involved_in ISO
IBA
IEA		 (PMID:11923287), (PMID:12324459), (PMID:25168678)
GO_REF:0000033
GO_REF:0000104		 RGD
GO_Central
UniProt		 PMID:11923287 PMID:12324459 PMID:25168678 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:240,902,804...240,929,234
Ensembl chr 1:240,902,855...240,929,337 		JBrowse link
G Pi4k2b phosphatidylinositol 4-kinase type 2 beta involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:11923287), (PMID:12324459)		 UniProt
GO_Central
RGD		 PMID:11923287 PMID:12324459 GO_REF:0000024 GO_REF:0000033 NCBI chr14:58,221,790...58,248,716
Ensembl chr14:58,220,437...58,248,673 		JBrowse link
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in ISO
IBA
IEA		 (MGI:5476893|PMID:23229899)
(PMID:23229899)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:23229899 GO_REF:0000033 GO_REF:0000107 MGI:5476893 NCBI chr11:83,609,148...83,726,876
Ensembl chr11:83,609,069...83,724,080 		JBrowse link
G Pi4kb phosphatidylinositol 4-kinase beta involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:182,540,377...182,572,684
Ensembl chr 2:182,540,567...182,588,488 		JBrowse link
G Pik3c2g phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:172,483,752...172,851,623
Ensembl chr 4:172,484,345...172,850,544 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in ISO (PMID:7628435) RGD PMID:7628435 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha IDA RGD PMID:12882977 RGD:4144086 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032 		JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in IDA
ISO		 (PMID:12502714) RGD PMID:12502714 PMID:12882977 RGD:4144086 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663 		JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma involved_in IDA
ISO		 (PMID:12502714) RGD PMID:12502714 PMID:12882977 RGD:4144086 NCBI chr 6:48,766,778...48,802,098
Ensembl chr 6:48,766,864...48,802,043 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISS
IBA		 GO_REF:0000024
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,665,517...18,674,067
Ensembl chr16:18,665,457...18,674,065 		JBrowse link
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:129,700,925...129,772,591
Ensembl chr 5:129,701,229...129,772,583 		JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029 		JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938 		JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078 		JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:182,628,299...182,671,584
Ensembl chr 2:182,628,300...182,671,598 		JBrowse link
G Pip5k1b phosphatidylinositol-4-phosphate 5-kinase type 1 beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:221,907,220...222,183,672
Ensembl chr 1:221,914,159...222,183,672 		JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988 		JBrowse link
G Pip5kl1 phosphatidylinositol-4-phosphate 5-kinase-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:15,860,493...15,869,264
Ensembl chr 3:15,855,946...15,869,165 		JBrowse link
G Sla2 Src-like-adaptor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:145,367,070...145,383,586
Ensembl chr 3:145,368,598...145,382,480 		JBrowse link
G Smg1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase involved_in ISO (PMID:11331269) RGD PMID:11331269 NCBI chr 1:172,441,892...172,543,667
Ensembl chr 1:172,444,936...172,543,698 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383 		JBrowse link
G Socs2 suppressor of cytokine signaling 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:30,006,360...30,045,161
Ensembl chr 7:30,008,578...30,043,548 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787 		JBrowse link
G Socs4 suppressor of cytokine signaling 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:20,523,406...20,537,889
Ensembl chr15:20,523,183...20,542,494 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834 		JBrowse link
G Socs6 suppressor of cytokine signaling 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:82,111,866...82,139,193
Ensembl chr18:82,111,827...82,139,219 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:82,352,159...82,388,829
Ensembl chr10:82,351,680...82,388,830 		JBrowse link
G Tmem150a transmembrane protein 150A involved_in ISS
ISO		 GO_REF:0000024
(PMID:25608530)		 UniProt
RGD		 PMID:25608530 GO_REF:0000024 NCBI chr 4:104,410,271...104,414,630
Ensembl chr 4:104,410,516...104,429,349 		JBrowse link
G Ttc7a tetratricopeptide repeat domain 7A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:7,159,285...7,261,826
Ensembl chr 6:7,159,061...7,261,892 		JBrowse link
G Ttc7b tetratricopeptide repeat domain 7B involved_in ISO
IBA		 (PMID:23229899), (PMID:26571211)
GO_REF:0000033		 RGD
GO_Central		 PMID:23229899 PMID:26571211 GO_REF:0000033 NCBI chr 6:119,587,389...119,799,167
Ensembl chr 6:119,587,390...119,799,330 		JBrowse link
phosphatidylinositol-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 involved_in ISO (PMID:8999962) RGD PMID:8999962 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113 		JBrowse link
G Atm ATM serine/threonine kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:8999962) RGD PMID:8999962 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742 		JBrowse link
G Fig4 FIG4 phosphoinositide 5-phosphatase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:44,600,603...44,724,047
Ensembl chr20:44,600,603...44,723,844 		JBrowse link
G Inpp4a inositol polyphosphate-4-phosphatase type I A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:39,528,245...39,650,574
Ensembl chr 9:39,528,674...39,646,581 		JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:25,920,189...26,670,085
Ensembl chr19:25,925,358...26,280,634 		JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:9,216,776...9,229,539
Ensembl chr 3:9,216,776...9,229,450 		JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2685045 (PMID:24098492)		 GO_Central
RGD		 PMID:24098492 GO_REF:0000033 NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472 		JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1203729 (PMID:24098492)		 GO_Central
RGD		 PMID:24098492 GO_REF:0000033 NCBI chr13:44,494,673...44,555,663
Ensembl chr13:44,495,050...44,555,612 		JBrowse link
G Pik3c2g phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma involved_in ISO
IBA
IDA		 (MGI:1201706|PMID:9514948)
GO_REF:0000033
PMID:9516481		 RGD
GO_Central		 PMID:9514948 PMID:9516481 GO_REF:0000033 MGI:1201706, RGD:729517 NCBI chr 4:172,483,752...172,851,623
Ensembl chr 4:172,484,345...172,850,544 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:8999962)
(PMID:24098492)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000108		 RGD
GO_Central
Ensembl
GOC		 PMID:8999962 PMID:24098492 GO_REF:0000033 GO_REF:0000107 GO_REF:0000108 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032 		JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in IEA
IBA		 GO_REF:0000108
GO_REF:0000033		 GOC
GO_Central		 GO_REF:0000033 GO_REF:0000108 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663 		JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:160,094,952...160,142,962
Ensembl chr 5:160,094,952...160,120,930 		JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:48,766,778...48,802,098
Ensembl chr 6:48,766,864...48,802,043 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in ISO (PMID:8999962) RGD PMID:8999962 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584 		JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:8999962) RGD PMID:8999962 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136 		JBrowse link
phosphatidylserine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plscr1 phospholipid scramblase 1 involved_in ISO (MGI:5284813|PMID:12509439)
(PMID:12509439)		 RGD PMID:12509439 MGI:5284813 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692 		JBrowse link
G Ptdss1 phosphatidylserine synthase 1 involved_in ISO
IEA		 (PMID:19014349)
GO_REF:0000041		 RGD
UniProt		 PMID:19014349 GO_REF:0000041 NCBI chr 7:63,845,017...63,906,791
Ensembl chr 7:63,844,268...63,906,791 		JBrowse link
G Ptdss2 phosphatidylserine synthase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19014349)
MGI:2447151 (PMID:12361952)
GO_REF:0000041		 RGD
UniProt		 PMID:12361952 PMID:19014349 GO_REF:0000041 NCBI chr 1:196,241,439...196,267,632
Ensembl chr 1:196,241,494...196,267,685 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000107		 RGD
Ensembl		 PMID:19523918 GO_REF:0000107 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
platelet activating factor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chpt1 choline phosphotransferase 1 involved_in ISO
IEA		 (PMID:10893425)
GO_REF:0000107		 RGD
Ensembl		 PMID:10893425 GO_REF:0000107 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103 		JBrowse link
G Lpcat2 lysophosphatidylcholine acyltransferase 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17182612)
(MGI:3708195|PMID:17182612)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17182612 GO_REF:0000024 GO_REF:0000107 MGI:3708195 NCBI chr19:14,088,389...14,152,742
Ensembl chr19:14,089,686...14,152,829 		JBrowse link
G Pla2g4a phospholipase A2 group 4A involved_in ISO
IEA		 (MGI:1100762|PMID:9403692)
(PMID:9403692)
GO_REF:0000107		 RGD
Ensembl		 PMID:9403692 GO_REF:0000107 MGI:1100762 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266 		JBrowse link
G Pla2g4c phospholipase A2 group IVC involved_in ISO (PMID:19501189) RGD PMID:19501189 NCBI chr 1:74,237,714...74,275,757
Ensembl chr 1:74,236,211...74,274,656 		JBrowse link
G Pla2g5 phospholipase A2, group V IDA RGD PMID:11106649 RGD:2303037 NCBI chr 5:151,041,339...151,109,433
Ensembl chr 5:151,041,340...151,062,658 		JBrowse link
positive regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO
IEA		 (PMID:23767959)
GO_REF:0000107		 RGD
Ensembl		 PMID:23767959 GO_REF:0000107 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047 		JBrowse link
positive regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl3 acyl-CoA synthetase long-chain family member 3 involved_in ISO
IEA		 (PMID:18003621)
GO_REF:0000107		 RGD
Ensembl		 PMID:18003621 GO_REF:0000107 NCBI chr 9:80,115,164...80,164,636
Ensembl chr 9:80,115,112...80,164,627 		JBrowse link
G Capn2 calpain 2 IMP RGD PMID:9481489 RGD:13792658 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969 		JBrowse link
G Rab38 RAB38, member RAS oncogene family IDA RGD PMID:28438206 RGD:13524861 NCBI chr 1:142,182,566...142,262,923
Ensembl chr 1:142,182,556...142,262,924 		JBrowse link
positive regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr2a 5-hydroxytryptamine receptor 2A involved_in ISO (PMID:19057895) RGD PMID:19057895 NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928 		JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19057895)		 UniProt
Ensembl
RGD		 PMID:19057895 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:86,735,793...86,756,638
Ensembl chr 9:86,742,102...86,755,108 		JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C involved_in ISO (PMID:19057895) RGD PMID:19057895 NCBI chr  X:110,640,777...110,870,288
Ensembl chr  X:110,641,153...110,870,287 		JBrowse link
positive regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrf5 adhesion G protein-coupled receptor F5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23590306)		 Ensembl
RGD		 PMID:23590306 GO_REF:0000107 NCBI chr 9:17,517,596...17,624,107
Ensembl chr 9:17,520,009...17,623,968 		JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 involved_in ISO (PMID:30846317) RGD PMID:30846317 NCBI chr 3:106,536,009...106,571,255
Ensembl chr 3:106,536,004...106,571,251 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IMP RGD PMID:19191103 RGD:126790485 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595 		JBrowse link
G Pc pyruvate carboxylase involved_in IMP PMID:23357280 CACAO PMID:23357280 RGD:10047307 NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380 		JBrowse link
regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO MGI:5014325 (PMID:27806294) RGD PMID:27806294 NCBI chr 1:205,731,828...205,743,430
Ensembl chr 1:205,733,872...205,743,421 		JBrowse link
regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101790 (PMID:15164767)		 Ensembl
RGD		 PMID:15164767 GO_REF:0000107 NCBI chr 5:142,651,962...142,658,707
Ensembl chr 5:142,651,956...142,658,718 		JBrowse link
regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 acts_upstream_of_or_within ISO (PMID:25218477) RGD PMID:25218477 NCBI chr 9:66,534,146...66,563,703
Ensembl chr 9:66,534,146...66,563,708 		JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:11003606)
(MGI:6467919|PMID:11003606)		 UniProt
RGD		 PMID:11003606 GO_REF:0000024 MGI:6467919 NCBI chr 5:122,806,949...122,881,259
Ensembl chr 5:122,776,549...122,881,287 		JBrowse link
sphinganine-1-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in ISO
IBA		 (PMID:10751414), (PMID:19729656)
GO_REF:0000033
(MGI:1860308|PMID:10751414)		 RGD
GO_Central		 PMID:10751414 PMID:19729656 GO_REF:0000033 MGI:1860308 NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391 		JBrowse link
sphingomyelin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:23560799) RGD PMID:23560799 NCBI chr10:94,917,520...94,991,199
Ensembl chr10:94,917,520...94,990,988 		JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of ISO MGI:1913862 (PMID:31880535) RGD PMID:31880535 NCBI chr 9:48,243,365...48,253,316
Ensembl chr 9:48,237,572...48,253,211 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:2137691|MGI:2181669|MGI:6382064 (PMID:31880535)		 Ensembl
RGD		 PMID:31880535 GO_REF:0000107 NCBI chr10:83,590,052...83,596,035
Ensembl chr10:83,590,071...83,598,620 		JBrowse link
G Osbp oxysterol binding protein involved_in ISO (PMID:12023275) RGD PMID:12023275 NCBI chr 1:208,888,697...208,918,511
Ensembl chr 1:208,887,895...208,918,506 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:25667419)		 Ensembl
RGD		 PMID:25667419 GO_REF:0000107 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in ISO
IBA
ISS		 (PMID:14685263), (PMID:14976195), (PMID:17982138)
GO_REF:0000033
(MGI:6221394|PMID:27892528)
GO_REF:0000024		 RGD
GO_Central
HGNC-UCL		 PMID:14685263 PMID:14976195 PMID:17982138 PMID:27892528 GO_REF:0000024 GO_REF:0000033 MGI:6221394 NCBI chr 1:229,996,673...230,259,591
Ensembl chr 1:229,998,119...230,259,603 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:27892528)
(PMID:25667419)
GO_REF:0000033
(MGI:6221394|PMID:27892528)
(PMID:14685263), (PMID:17982138)		 Ensembl
RGD
GO_Central		 PMID:14685263 PMID:17982138 PMID:25667419 PMID:27892528 GO_REF:0000033 GO_REF:0000107 MGI:6221394 NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546 		JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5749304|PMID:26301690)
(PMID:26301690)
MGI:3815115 (PMID:16216550)		 RGD PMID:16216550 PMID:26301690 MGI:5749304 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3815117 (PMID:16216550)		 Ensembl
RGD		 PMID:16216550 GO_REF:0000107 NCBI chr 6:106,948,682...107,031,532
Ensembl chr 6:106,950,949...107,031,542 		JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:12023275) RGD PMID:12023275 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20134
    cellular process 19326
      metabolic process 12309
        biosynthetic process 8436
          organophosphate biosynthetic process 590
            phospholipid biosynthetic process 239
              4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process 0
              5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate biosynthetic process 0
              GDP-alpha-D-mannosylchitobiosyldiphosphodolichol biosynthetic process 0
              Kdo2-lipid A biosynthetic process 0
              beta-L-Ara4N-lipid A biosynthetic process 0
              ceramide phosphoethanolamine biosynthetic process 2
              copal-8-ol diphosphate(3-) biosynthetic process 0
              dimethylallyl diphosphate biosynthetic process 15
              dolichyl diphosphate biosynthetic process 2
              dolichyl monophosphate biosynthetic process 1
              farnesyl diphosphate biosynthetic process + 4
              geranyl diphosphate biosynthetic process 2
              geranylgeranyl diphosphate biosynthetic process 1
              glycerophospholipid biosynthetic process + 174
              isopentenyl diphosphate biosynthetic process + 10
              lipid A biosynthetic process 0
              mannosyl-inositol phosphorylceramide biosynthetic process 0
              negative regulation of phospholipid biosynthetic process + 8
              phytyl diphosphate biosynthetic process 0
              positive regulation of phospholipid biosynthetic process + 11
              regulation of phospholipid biosynthetic process + 23
              sphinganine-1-phosphate biosynthetic process 1
              sphingomyelin biosynthetic process 10
Path 2
Term Annotations click to browse term
  biological_process 20134
    cellular process 19326
      metabolic process 12309
        primary metabolic process 10935
          lipid metabolic process 1457
            phospholipid metabolic process 388
              phospholipid biosynthetic process 239
                4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process 0
                5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate biosynthetic process 0
                GDP-alpha-D-mannosylchitobiosyldiphosphodolichol biosynthetic process 0
                Kdo2-lipid A biosynthetic process 0
                beta-L-Ara4N-lipid A biosynthetic process 0
                ceramide phosphoethanolamine biosynthetic process 2
                copal-8-ol diphosphate(3-) biosynthetic process 0
                dimethylallyl diphosphate biosynthetic process 15
                dolichyl diphosphate biosynthetic process 2
                dolichyl monophosphate biosynthetic process 1
                farnesyl diphosphate biosynthetic process + 4
                geranyl diphosphate biosynthetic process 2
                geranylgeranyl diphosphate biosynthetic process 1
                glycerophospholipid biosynthetic process + 174
                isopentenyl diphosphate biosynthetic process + 10
                lipid A biosynthetic process 0
                mannosyl-inositol phosphorylceramide biosynthetic process 0
                negative regulation of phospholipid biosynthetic process + 8
                phytyl diphosphate biosynthetic process 0
                positive regulation of phospholipid biosynthetic process + 11
                regulation of phospholipid biosynthetic process + 23
                sphinganine-1-phosphate biosynthetic process 1
                sphingomyelin biosynthetic process 10
paths to the root