Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:lipopolysaccharide metabolic process
go back to main search page
Accession:GO:0008653 term browser browse the term
Definition:The chemical reactions and pathways involving lipopolysaccharides, a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.
Synonyms:exact_synonym: LPS metabolic process;   lipopolysaccharide metabolism


show annotations for term's descendants           Sort by:
lipopolysaccharide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOAH acyloxyacyl hydrolase acts_upstream_of_or_within ISO (PMID:15155618) MGI PMID:15155618 NCBI chr14:47,893,659...48,052,809
Ensembl chr14:47,894,806...48,053,301 		JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOAH acyloxyacyl hydrolase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:47,893,659...48,052,809
Ensembl chr14:47,894,806...48,053,301 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    metabolic process 10998
      organic substance metabolic process 10554
        macromolecule metabolic process 8924
          lipopolysaccharide metabolic process 1
            lipopolysaccharide biosynthetic process + 0
            lipopolysaccharide catabolic process 1
            lipopolysaccharide core region metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 17917
    metabolic process 10998
      primary metabolic process 9574
        lipid metabolic process 1366
          liposaccharide metabolic process 111
            lipopolysaccharide metabolic process 1
              lipopolysaccharide biosynthetic process + 0
              lipopolysaccharide catabolic process 1
              lipopolysaccharide core region metabolic process + 0
paths to the root