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ONTOLOGY REPORT - ANNOTATIONS


Term:ether lipid biosynthetic process
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Accession:GO:0008611 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.
Synonyms:exact_synonym: ether lipid anabolism;   ether lipid biosynthesis;   ether lipid formation;   ether lipid synthesis
 narrow_synonym: plasmalogen biosynthetic process



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ether lipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGPS alkylglycerone phosphate synthase involved_in ISS
IEA
UniProt GO_REF:0000024 GO_REF:0000041 NCBI chr 2:177,392,773...177,543,834
Ensembl chr 2:177,392,746...177,567,024
JBrowse link
G DHRS7B dehydrogenase/reductase 7B involved_in TAS
IEA
Reactome
Ensembl
GO_REF:0000107 Reactome:R-HSA-75896 NCBI chr17:21,126,964...21,191,420
Ensembl chr17:21,123,364...21,193,265
JBrowse link
G FAR1 fatty acyl-CoA reductase 1 involved_in IMP
IDA
(PMID:20071337)
(PMID:24108123)
UniProt PMID:20071337 PMID:24108123 NCBI chr11:13,668,668...13,732,346
Ensembl chr11:13,668,668...13,732,346
JBrowse link
G FASN fatty acid synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:82,078,338...82,098,236
Ensembl chr17:82,078,338...82,098,294
JBrowse link
G GNPAT glyceronephosphate O-acyltransferase acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
IDA
TAS
(MGI:2669056|PMID:12874108)
(PMID:15687349)
MGI
GO_Central
TreeGrafter
Ensembl
UniProt
Reactome
InterPro
PMID:12874108 PMID:15687349 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:2669056 Reactome:R-HSA-75896 NCBI chr 1:231,241,212...231,277,973
Ensembl chr 1:231,241,207...231,277,973
JBrowse link
G PEDS1 plasmanylethanolamine desaturase 1 involved_in IMP
IDA
IEA
IBA
(PMID:32209662)
(PMID:31604315)
UniProt
Ensembl
TreeGrafter
GO_Central
PMID:31604315 PMID:32209662 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr20:50,118,254...50,153,723
Ensembl chr20:50,118,254...50,153,734
JBrowse link
G PEDS1-UBE2V1 PEDS1-UBE2V1 readthrough involved_in IMP
IBA
IEA
IDA
(PMID:32209662)
(PMID:31604315)
UniProt
GO_Central
TreeGrafter
Ensembl
PMID:31604315 PMID:32209662 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr20:50,081,124...50,153,723
Ensembl chr20:50,081,124...50,153,637
JBrowse link
G PEX7 peroxisomal biogenesis factor 7 involved_in IMP (PMID:12522768), (PMID:9090383) UniProt PMID:9090383 PMID:12522768 NCBI chr 6:136,822,592...136,913,934
Ensembl chr 6:136,822,564...136,913,934
JBrowse link
platelet activating factor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHPT1 choline phosphotransferase 1 involved_in IDA (PMID:10893425) UniProt PMID:10893425 NCBI chr12:101,697,640...101,729,074
Ensembl chr12:101,696,947...101,744,140
JBrowse link
G LPCAT2 lysophosphatidylcholine acyltransferase 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr16:55,509,072...55,586,666
Ensembl chr16:55,509,072...55,586,666
JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in IEA
NAS
(PMID:9430701) Ensembl
UniProt
PMID:9430701 GO_REF:0000107 NCBI chr 1:186,828,949...186,988,981
Ensembl chr 1:186,828,949...186,988,981
JBrowse link
G PLA2G4C phospholipase A2 group IVC involved_in IDA (PMID:19501189) UniProt PMID:19501189 NCBI chr19:48,047,846...48,110,817
Ensembl chr19:48,047,843...48,110,817
JBrowse link
G PLA2G5 phospholipase A2 group V ISO RGD PMID:11106649 RGD:2303037 NCBI chr 1:20,028,408...20,091,911
Ensembl chr 1:20,028,179...20,091,911
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19771
    metabolic process 12509
      cellular metabolic process 11170
        cellular lipid metabolic process 1131
          cellular lipid biosynthetic process 25
            ether lipid biosynthetic process 13
              platelet activating factor biosynthetic process 5
Path 2
Term Annotations click to browse term
  biological_process 19771
    metabolic process 12509
      small molecule metabolic process 2024
        ether metabolic process 30
          glycerol ether metabolic process 25
            ether lipid metabolic process 25
              ether lipid biosynthetic process 13
                platelet activating factor biosynthetic process 5
paths to the root