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ONTOLOGY REPORT - ANNOTATIONS

Term:ether lipid biosynthetic process
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Accession:GO:0008611 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.
Synonyms:exact_synonym: ether lipid anabolism;   ether lipid biosynthesis;   ether lipid formation;   ether lipid synthesis
 narrow_synonym: plasmalogen biosynthetic process
 xref: Reactome:R-HSA-75896 "Plasmalogen biosynthesis"


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ether lipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agps alkylglycerone phosphate synthase involved_in IEA
ISS		 GO_REF:0000041
GO_REF:0000024		 UniProt GO_REF:0000024 GO_REF:0000041 NCBI chr 3:81,154,599...81,253,099
Ensembl chr 3:60,747,323...60,845,830 		JBrowse link
G Dhrs7b dehydrogenase/reductase 7B involved_in ISO MGI:5749209 (PMID:25565205) RGD PMID:25565205 NCBI chr10:46,003,845...46,036,498
Ensembl chr10:45,504,426...45,537,076 		JBrowse link
G Far1 fatty acyl CoA reductase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20071337), (PMID:24108123)		 UniProt
Ensembl
RGD		 PMID:20071337 PMID:24108123 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:167,644,622...167,705,868
Ensembl chr 1:167,644,677...167,705,730 		JBrowse link
G Fasn fatty acid synthase involved_in IEA
ISO		 GO_REF:0000107
MGI:3765070 (PMID:25565205)		 Ensembl
RGD		 PMID:25565205 GO_REF:0000107 NCBI chr10:106,570,415...106,588,581
Ensembl chr10:106,072,091...106,090,261 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:15687349)
MGI:2670461 (PMID:12874108)
GO_REF:0000033
GO_REF:0000002		 RGD
GO_Central
InterPro		 PMID:12874108 PMID:15687349 GO_REF:0000002 GO_REF:0000033 NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361 		JBrowse link
G Peds1 plasmanylethanolamine desaturase 1 involved_in ISO
IBA		 (PMID:31604315), (PMID:32209662)
(PMID:32209662)
GO_REF:0000033		 RGD
GO_Central		 PMID:31604315 PMID:32209662 GO_REF:0000033 NCBI chr 3:156,350,135...156,369,309
Ensembl chr 3:156,349,526...156,369,314 		JBrowse link
G Pex7 peroxisomal biogenesis factor 7 involved_in ISO
IEA		 (PMID:12522768), (PMID:9090383)
GO_REF:0000107		 RGD
Ensembl		 PMID:9090383 PMID:12522768 GO_REF:0000107 NCBI chr 1:16,402,319...16,466,304
Ensembl chr 1:14,582,699...14,646,748 		JBrowse link
G Selenoi selenoprotein I involved_in ISO (PMID:38582453) RGD PMID:38582453 NCBI chr 6:26,073,127...26,111,326
Ensembl chr 6:26,072,648...26,111,314 		JBrowse link
platelet activating factor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chpt1 choline phosphotransferase 1 involved_in ISO
IEA		 (PMID:10893425)
GO_REF:0000107		 RGD
Ensembl		 PMID:10893425 GO_REF:0000107 NCBI chr 7:24,753,880...24,802,529
Ensembl chr 7:22,863,027...22,915,103 		JBrowse link
G Lpcat2 lysophosphatidylcholine acyltransferase 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17182612)		 UniProt
RGD		 PMID:17182612 GO_REF:0000024 NCBI chr19:14,088,389...14,152,742
Ensembl chr19:14,089,686...14,152,829 		JBrowse link
G Pla2g4a phospholipase A2 group 4A involved_in IEA
ISO		 GO_REF:0000107
(PMID:9403692)		 Ensembl
RGD		 PMID:9403692 GO_REF:0000107 NCBI chr13:64,427,921...64,572,352
Ensembl chr13:61,877,813...62,022,266 		JBrowse link
G Pla2g4c phospholipase A2 group IVC involved_in ISO
IEA		 (PMID:19501189)
GO_REF:0000107		 RGD
Ensembl		 PMID:19501189 GO_REF:0000107 NCBI chr 1:83,315,017...83,411,342
Ensembl chr 1:74,236,211...74,274,656 		JBrowse link
G Pla2g5 phospholipase A2, group V IDA RGD PMID:11106649 RGD:2303037 NCBI chr 5:156,324,628...156,393,065
Ensembl chr 5:151,041,340...151,062,658 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        biosynthetic process 8654
          lipid biosynthetic process 745
            ether lipid biosynthetic process 13
              platelet activating factor biosynthetic process 5
Path 2
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        small molecule metabolic process 1928
          ether metabolic process 28
            glycerol ether metabolic process 23
              ether lipid metabolic process 23
                ether lipid biosynthetic process 13
                  platelet activating factor biosynthetic process 5
paths to the root