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ONTOLOGY REPORT - ANNOTATIONS


Term:lipid biosynthetic process
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Accession:GO:0008610 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
Synonyms:exact_synonym: lipid anabolism;   lipid biosynthesis;   lipid formation;   lipid synthesis;   lipogenesis



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lipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acly ATP citrate lyase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23932781)
UniProt
Ensembl
RGD
PMID:23932781 GO_REF:0000024 GO_REF:0000107 NCBI chr10:85,412,045...85,464,253
Ensembl chr10:85,412,049...85,463,320
JBrowse link
G Acsl1 acyl-CoA synthetase long-chain family member 1 involved_in ISO
IBA
(PMID:21242590), (PMID:25592151)
PMID:21873635
RGD PMID:21242590 PMID:25592151 PMID:21873635 RGD:13792537 NCBI chr16:45,755,246...45,821,541
Ensembl chr16:45,755,254...45,821,541
JBrowse link
G Acsl4 acyl-CoA synthetase long-chain family member 4 involved_in ISO (PMID:21242590) RGD PMID:21242590 NCBI chr  X:105,942,794...106,006,573
Ensembl chr  X:105,942,799...106,006,427
JBrowse link
G Acsl5 acyl-CoA synthetase long-chain family member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:254,289,513...254,336,608
Ensembl chr 1:254,292,521...254,336,607
JBrowse link
G Acsl6 acyl-CoA synthetase long-chain family member 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:38,439,914...38,501,182
Ensembl chr10:38,440,080...38,498,757
JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 involved_in ISO (PMID:10843999) RGD PMID:10843999 NCBI chr 3:144,003,808...144,047,452
Ensembl chr 3:144,004,336...144,059,675
JBrowse link
G Agmo alkylglycerol monooxygenase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:53,986,236...54,317,838
Ensembl chr 6:53,986,292...54,317,623
JBrowse link
G Agps alkylglycerone phosphate synthase acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:9553082)
PMID:21873635
RGD PMID:9553082 PMID:21873635 RGD:13792537 NCBI chr 3:60,747,323...60,845,831
Ensembl chr 3:60,747,323...60,845,830
JBrowse link
G Ccdc3 coiled-coil domain containing 3 acts_upstream_of
involved_in
ISO
IEA
(MGI:5635338|PMID:25605713)
GO_REF:0000107
RGD
Ensembl
PMID:25605713 GO_REF:0000107 MGI:5635338 NCBI chr17:73,031,891...73,135,173
Ensembl chr17:73,035,045...73,135,337
JBrowse link
G Dolpp1 dolichyldiphosphatase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:13,664,893...13,674,312
Ensembl chr 3:13,665,823...13,674,311
JBrowse link
G Fasn fatty acid synthase TAS RGD PMID:11971939 RGD:728468 NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 involved_in ISO (MGI:3623167|PMID:16449762) RGD PMID:16449762 MGI:3623167 NCBI chr16:68,819,031...68,852,903
Ensembl chr16:68,819,079...68,852,901
JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:8069456) RGD PMID:8069456 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Olah oleoyl-ACP hydrolase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:74,877,651...74,902,517
Ensembl chr17:74,877,655...74,902,518
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5005039|PMID:21459323)
UniProt
RGD
PMID:21459323 GO_REF:0000024 MGI:5005039 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5005039|PMID:21459323)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21459323 GO_REF:0000024 GO_REF:0000107 MGI:5005039 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prpf19 pre-mRNA processing factor 19 acts_upstream_of_or_within ISO (MGI:3706232|PMID:17118936) RGD PMID:17118936 MGI:3706232 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
JBrowse link
G Scd stearoyl-CoA desaturase IEP RGD PMID:12896875 RGD:1304415 NCBI chr 1:243,269,745...243,282,878
Ensembl chr 1:243,269,747...243,282,562
JBrowse link
G Serpina12 serpin family A member 12 acts_upstream_of
involved_in
ISO
IEA
(MGI:5563627|PMID:22837305)
GO_REF:0000107
RGD
Ensembl
PMID:22837305 GO_REF:0000107 MGI:5563627 NCBI chr 6:122,952,552...122,967,271
Ensembl chr 6:122,952,552...122,967,271
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in TAS
ISS
ISO
GO_REF:0000024
(PMID:32497488)
(MGI:5005039|PMID:21459323)
UniProt
RGD
PMID:21459323 PMID:32497488 PMID:12036955 GO_REF:0000024 MGI:5005039, RGD:625495 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 TAS RGD PMID:15944339 RGD:1625196 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
JBrowse link
1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:26774281)
UniProt
Ensembl
RGD
PMID:26774281 GO_REF:0000024 GO_REF:0000107 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO
ISS
(PMID:26774281)
GO_REF:0000024
RGD
UniProt
PMID:26774281 GO_REF:0000024 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO
ISS
(PMID:26774281)
GO_REF:0000024
RGD
UniProt
PMID:26774281 GO_REF:0000024 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078
JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 involved_in IBA
ISO
PMID:21873635
(MGI:3690523|PMID:17034760)
RGD PMID:17034760 PMID:21873635 MGI:3690523, RGD:13792537 NCBI chr 4:103,112,974...103,132,122
Ensembl chr 4:103,112,963...103,132,017
JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family, member A1 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 1:16,183,940...16,203,385
Ensembl chr 1:16,183,940...16,203,385
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in ISO
ISS
(PMID:11304534)
GO_REF:0000024
RGD
UniProt
PMID:11304534 GO_REF:0000024 NCBI chr 3:54,147,834...54,170,052
Ensembl chr 3:54,147,803...54,220,241
JBrowse link
G Rdh16 retinol dehydrogenase 16 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 7:63,616,724...63,624,120
Ensembl chr 7:63,597,536...63,624,124
JBrowse link
aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in IMP
ISO
PMID:19342457
(PMID:19342457)
RGD PMID:19342457 PMID:19342457 RGD:4891166 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IMP
IBA
PMID:19342457
PMID:21873635
UniProt
GO_Central
PMID:19342457 PMID:21873635 RGD:4891166, RGD:13792537 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IDA
ISO
IBA
(PMID:19342457), (PMID:2256920)
PMID:21873635
RGD PMID:2256920 PMID:19342457 PMID:11832364 PMID:21873635 RGD:727991, RGD:13792537 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 involved_in ISO (PMID:1741400), (PMID:19342457), (PMID:2256920), (PMID:23322723) RGD PMID:1741400 PMID:2256920 PMID:19342457 PMID:23322723 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
JBrowse link
androgen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 TAS RGD PMID:7702752 RGD:1298833 NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573
JBrowse link
G Hsd17b2 hydroxysteroid (17-beta) dehydrogenase 2 IDA androstenedione RGD PMID:8612487 RGD:728619 NCBI chr19:45,753,576...45,825,203
Ensembl chr19:45,753,574...45,825,202
JBrowse link
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 involved_in IDA
ISO
(PMID:25322271) RGD PMID:25322271 PMID:1985917 RGD:632871 NCBI chr 2:186,095,897...186,105,354
Ensembl chr 2:186,095,897...186,101,852
JBrowse link
G Med1 mediator complex subunit 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19497978)
UniProt
RGD
PMID:19497978 GO_REF:0000024 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Scarb1 scavenger receptor class B, member 1 IDA RGD PMID:12746305 RGD:1304382 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 acts_upstream_of_or_within IDA
ISO
dihydrotestosterone
MGI:1857454 (MGI:3045995|PMID:15249131)
RGD PMID:15249131 PMID:12606426 MGI:3045995, RGD:4891962 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 acts_upstream_of_or_within IDA
ISO
dihydrotestosterone
(MGI:3045995|PMID:15249131)
RGD PMID:15249131 PMID:12606426 MGI:3045995, RGD:4891962 NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112
JBrowse link
attachment of GPI anchor to protein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pigk phosphatidylinositol glycan anchor biosynthesis, class K involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:241,630,021...241,715,493
Ensembl chr 2:241,630,053...241,716,134
JBrowse link
G Pigs phosphatidylinositol glycan anchor biosynthesis, class S involved_in ISO
IBA
(MGI:3688056|PMID:11483512)
PMID:21873635
RGD PMID:11483512 PMID:21873635 MGI:3688056, RGD:13792537 NCBI chr10:63,222,611...63,237,190
Ensembl chr10:63,222,572...63,237,187
JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis, class T involved_in IBA
ISO
PMID:21873635
(MGI:3688056|PMID:11483512)
RGD PMID:11483512 PMID:21873635 MGI:3688056, RGD:13792537 NCBI chr 3:153,227,749...153,236,922
Ensembl chr 3:153,227,420...153,236,887
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:12802054)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:12802054 PMID:21873635 GO_REF:0000002 GO_REF:0000107, RGD:13792537 NCBI chr 3:143,784,831...143,881,268
Ensembl chr 3:143,784,832...143,880,807
JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO
ISS
(MGI:5613029|PMID:25168382)
GO_REF:0000024
RGD
UniProt
PMID:25168382 GO_REF:0000024 MGI:5613029 NCBI chr 2:209,852,087...209,905,763
Ensembl chr 2:209,852,087...209,906,020
JBrowse link
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:7508385)
GO_REF:0000002
RGD
InterPro
PMID:7508385 GO_REF:0000002 NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372
JBrowse link
G Amacr alpha-methylacyl-CoA racemase involved_in IDA
IEA
GO_REF:0000041 UniProt
RGD
PMID:11964182 GO_REF:0000041, RGD:704372 NCBI chr 2:59,946,158...59,958,255
Ensembl chr 2:59,946,153...59,958,255
JBrowse link
G Baat bile acid CoA:amino acid N-acyltransferase involved_in ISO (PMID:12810727), (PMID:8034703) RGD PMID:8034703 PMID:12810727 NCBI chr 5:63,851,668...63,860,641
Ensembl chr 5:63,850,705...63,860,685
JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in IEA
ISS
ISO
GO_REF:0000041
GO_REF:0000024
(PMID:11412116), (PMID:9660774)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9660774 PMID:11412116 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551
JBrowse link
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 involved_in IBA
ISO
PMID:21873635
(MGI:1859119|PMID:10748047)
(PMID:10748047)
RGD PMID:10748047 PMID:21873635 MGI:1859119, RGD:13792537 NCBI chr 9:17,230,455...17,306,775
Ensembl chr 9:17,230,455...17,306,775
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in TAS
IEA
IDA
ISO
IBA
GO_REF:0000041
PMID:1694852
(PMID:19965590)
PMID:21873635
UniProt
RGD
PMID:19965590 PMID:2335522 PMID:1694852 PMID:21873635 GO_REF:0000041, RGD:70535, RGD:70534, RGD:13792537 NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688
JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 involved_in TAS
ISO
IEA
IBA
(MGI:1859119|PMID:10748047)
GO_REF:0000041
GO_REF:0000107
PMID:21873635
RGD
UniProt
Ensembl
PMID:10748047 PMID:12029625 PMID:21873635 GO_REF:0000041 GO_REF:0000107 MGI:1859119, RGD:1298868, RGD:13792537 NCBI chr 2:100,502,791...100,669,713
Ensembl chr 2:100,502,791...100,669,698
JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 involved_in ISO (PMID:14643796)
(MGI:3588413|PMID:12393855)
RGD PMID:12393855 PMID:14643796 MGI:3588413 NCBI chr 8:121,578,123...121,580,093
Ensembl chr 8:121,557,062...121,580,166
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384427 (MGI:1933035|PMID:11279518) RGD PMID:11279518 MGI:1933035 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISO
ISS
IEA
(PMID:12917011)
GO_REF:0000024
GO_REF:0000041
RGD
UniProt
PMID:12917011 GO_REF:0000024 GO_REF:0000041 NCBI chr  X:21,089,152...21,091,597
Ensembl chr  X:21,089,122...21,109,488
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO MGI:2180128 (MGI:3027293|PMID:14673138) RGD PMID:14673138 MGI:3027293 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:11980911)
Ensembl
RGD
PMID:11980911 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:113,804,728...113,842,208
Ensembl chr 3:113,804,728...113,842,208
JBrowse link
G Slc27a5 solute carrier family 27 member 5 involved_in ISO
IBA
(PMID:11980911)
PMID:21873635
RGD PMID:11980911 PMID:21873635 RGD:13792537 NCBI chr 1:73,616,556...73,627,149
Ensembl chr 1:73,616,564...73,627,172
JBrowse link
G Star steroidogenic acute regulatory protein IDA RGD PMID:15382124 RGD:1600081 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
brassinosteroid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr7 7-dehydrocholesterol reductase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055
JBrowse link
C21-steroid hormone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
IBA
pregnenolone
GO_REF:0000002
(MGI:68080|PMID:7527351)
PMID:21873635
(PMID:11502818), (PMID:18182448), (PMID:21636783)
InterPro
RGD
PMID:7527351 PMID:11502818 PMID:18182448 PMID:21636783 PMID:19665544 More... GO_REF:0000002 MGI:68080, RGD:4891164, RGD:13792537 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IDA
ISO
IBA
(PMID:2256920)
PMID:21873635
RGD PMID:2256920 PMID:11832364 PMID:21873635 RGD:727991, RGD:13792537 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 involved_in ISO (PMID:2256920) RGD PMID:2256920 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
JBrowse link
G Cyp21a1 cytochrome P450, family 21, subfamily a, polypeptide 1 IMP RGD PMID:9408081 RGD:1298842 NCBI chr20:4,020,217...4,026,923
Ensembl chr20:4,023,767...4,026,923
JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551
JBrowse link
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 IDA RGD PMID:1985917 RGD:632871 NCBI chr 2:186,095,897...186,105,354
Ensembl chr 2:186,095,897...186,101,852
JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:15465040)
Ensembl
RGD
PMID:15465040 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551
JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO
IEA
IBA
(PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
GO_REF:0000107
(MGI:3590419|PMID:15972816)
PMID:21873635
RGD
Ensembl
PMID:9415400 PMID:15795327 PMID:15972816 PMID:16549446 PMID:17023519 More... GO_REF:0000107 MGI:3590419, RGD:13792537 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
JBrowse link
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15465040), (PMID:18511070)
(MGI:2677973|PMID:12867411)
RGD PMID:12867411 PMID:15465040 PMID:18511070 MGI:2677973 NCBI chr 1:168,749,302...168,798,079
Ensembl chr 1:168,751,038...168,797,759
JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:9,207,986...9,230,038
Ensembl chr12:9,015,383...9,285,008
JBrowse link
cardiolipin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crls1 cardiolipin synthase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:120,119,822...120,138,674
Ensembl chr 3:120,119,852...120,138,655
JBrowse link
G Pgs1 phosphatidylglycerophosphate synthase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:103,214,635...103,250,254
Ensembl chr10:103,214,646...103,250,254
JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISO (PMID:19164547) RGD PMID:19164547 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114
JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in ISO
ISS
(PMID:16939411)
GO_REF:0000024
RGD
UniProt
PMID:16939411 GO_REF:0000024 NCBI chr10:54,566,556...54,573,240
Ensembl chr10:54,566,873...54,578,709
JBrowse link
G Ptpmt1 protein tyrosine phosphatase, mitochondrial 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5288296|PMID:21641550)
UniProt
RGD
PMID:21641550 GO_REF:0000024 MGI:5288296 NCBI chr 3:76,889,922...76,899,427
Ensembl chr 3:76,889,922...76,899,427
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in IBA
ISO
PMID:21873635
(PMID:19523918)
RGD PMID:19523918 PMID:21873635 RGD:13792537 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:11118295), (PMID:16873891), (PMID:17043667), (PMID:19164547) RGD PMID:11118295 PMID:16873891 PMID:17043667 PMID:19164547 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001
JBrowse link
G Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:148,070,388...148,103,728
Ensembl chr 4:148,018,463...148,103,694
JBrowse link
CDP-choline pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cept1 choline/ethanolamine phosphotransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578
JBrowse link
G Chka choline kinase alpha involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2179661|PMID:11964179)
(MGI:3695773|PMID:16861741)
RGD PMID:11964179 PMID:16861741 PMID:21873635 MGI:2179661 MGI:3695773, RGD:13792537 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516
JBrowse link
G Chkb choline kinase beta involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3578417 (MGI:3623691|PMID:16371353)
RGD PMID:16371353 PMID:21873635 MGI:3623691, RGD:13792537 NCBI chr 7:120,500,960...120,504,359
Ensembl chr 7:120,500,984...120,504,461
JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103
JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in IDA
ISO
PMID:19783652
(MGI:2667298|PMID:12842190)
PMID:8185307
(PMID:10480912)
PMID:8381041
RGD PMID:10480912 PMID:12842190 PMID:19783652 PMID:8185307 PMID:8381041 MGI:2667298, RGD:8553740, RGD:39458015, RGD:729578 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357
JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in IEA
ISO
ISS
GO_REF:0000107
GO_REF:0000002
(MGI:2667298|PMID:12842190)
GO_REF:0000024
(PMID:10480912)
Ensembl
InterPro
RGD
UniProt
PMID:10480912 PMID:12842190 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 MGI:2667298 NCBI chr  X:58,378,090...58,471,623
Ensembl chr  X:58,378,116...58,468,935
JBrowse link
G Phka1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:67,601,302...67,738,504
Ensembl chr  X:67,601,302...67,738,455
JBrowse link
CDP-diacylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agpat4 1-acylglycerol-3-phosphate O-acyltransferase 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:48,525,131...48,633,798
Ensembl chr 1:48,527,323...48,633,345
JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:8863531)
GO_REF:0000041
(PMID:25375833), (PMID:9407135)
UniProt
RGD
PMID:8863531 PMID:9407135 PMID:25375833 GO_REF:0000024 GO_REF:0000041 NCBI chr14:7,820,328...7,882,943
Ensembl chr14:7,820,351...7,882,681
JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 involved_in ISO
ISS
IEA
(PMID:25375833)
GO_REF:0000024
GO_REF:0000041
RGD
UniProt
PMID:25375833 GO_REF:0000024 GO_REF:0000041 NCBI chr 3:119,514,963...119,553,555
Ensembl chr 3:119,515,000...119,553,541
JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639
JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:114,646,446...114,657,051
Ensembl chr 3:114,648,498...114,657,051
JBrowse link
G Gpat3 glycerol-3-phosphate acyltransferase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:8,715,367...8,768,051
Ensembl chr14:8,714,373...8,766,490
JBrowse link
G Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog involved_in IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 4:148,070,388...148,103,728
Ensembl chr 4:148,018,463...148,103,694
JBrowse link
ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agk acylglycerol kinase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3054595|PMID:15252046)
RGD PMID:15252046 PMID:21873635 MGI:3054595, RGD:13792537 NCBI chr 4:69,114,850...69,193,989
Ensembl chr 4:69,114,269...69,193,934
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3789553|PMID:17403930)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17403930 GO_REF:0000024 GO_REF:0000107 MGI:3789553 NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5488571|PMID:22832496)
UniProt
RGD
PMID:22832496 GO_REF:0000024 MGI:5488571 NCBI chr10:53,830,219...53,854,328
Ensembl chr10:53,831,264...53,854,328
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISO
ISS
(PMID:12764132), (PMID:12815059)
GO_REF:0000024
RGD
UniProt
PMID:12764132 PMID:12815059 GO_REF:0000024 NCBI chr16:50,966,404...50,997,827
Ensembl chr16:50,966,229...51,008,233
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO
IDA
(PMID:11278489), (PMID:17475390)
(MGI:6274955|PMID:21613224)
PMID:15123644
RGD PMID:11278489 PMID:17475390 PMID:21613224 PMID:15123644 PMID:11278489 MGI:6274955, RGD:13838793, RGD:13838803 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162
JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO (PMID:12105227), (PMID:12869556), (PMID:15823095), (PMID:17548428), (PMID:18541923), (PMID:22922758), (PMID:24782409)
(MGI:3696321|PMID:16951403), (MGI:3764760|PMID:17977534), (MGI:5008665|PMID:21625621), (MGI:5755322|PMID:26620563), (MGI:6380950|PMID:30605666)
RGD PMID:12105227 PMID:12869556 PMID:15823095 PMID:16951403 PMID:17548428 More... MGI:3696321 MGI:3764760 MGI:5008665 MGI:5755322 MGI:6380950 NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519
JBrowse link
G Cers2 ceramide synthase 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17977534), (PMID:18165233), (PMID:29632068)
PMID:21873635
(MGI:4421488|PMID:19801672), (MGI:5755322|PMID:26620563)
(MGI:3696894|PMID:15823095)
RGD PMID:15823095 PMID:17977534 PMID:18165233 PMID:19801672 PMID:26620563 More... MGI:3696894 MGI:4421488 MGI:5755322, RGD:13792537 NCBI chr 2:182,890,527...182,898,805
Ensembl chr 2:182,890,493...182,933,314
JBrowse link
G Cers3 ceramide synthase 3 involved_in ISO
IBA
(PMID:17977534), (PMID:22038835), (PMID:23754960)
PMID:21873635
(MGI:5303015|PMID:22038835)
RGD PMID:17977534 PMID:22038835 PMID:23754960 PMID:21873635 MGI:5303015, RGD:13792537 NCBI chr 1:120,316,930...120,422,926
Ensembl chr 1:120,318,212...120,422,902
JBrowse link
G Cers4 ceramide synthase 4 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17977534), (PMID:29632068)
PMID:21873635
(MGI:2679796|PMID:12912983), (MGI:3696894|PMID:15823095)
RGD PMID:12912983 PMID:15823095 PMID:17977534 PMID:29632068 PMID:21873635 MGI:2679796 MGI:3696894, RGD:13792537 NCBI chr12:2,851,784...2,890,244
Ensembl chr12:2,851,784...2,886,828
JBrowse link
G Cers5 ceramide synthase 5 involved_in ISO
IBA
(PMID:16951403), (PMID:29632068)
PMID:21873635
(MGI:3696624|PMID:16100120), (MGI:3722529|PMID:17609214), (MGI:3764760|PMID:17977534)
RGD PMID:16100120 PMID:16951403 PMID:17609214 PMID:17977534 PMID:29632068 More... MGI:3696624 MGI:3722529 MGI:3764760, RGD:13792537 NCBI chr 7:130,859,993...130,897,979
Ensembl chr 7:130,859,990...130,897,947
JBrowse link
G Cers6 ceramide synthase 6 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17609214), (PMID:17977534)
PMID:21873635
(MGI:5513027|PMID:23760501), (MGI:5755322|PMID:26620563)
(MGI:3696894|PMID:15823095)
RGD PMID:15823095 PMID:17609214 PMID:17977534 PMID:23760501 PMID:26620563 More... MGI:3696894 MGI:5513027 MGI:5755322, RGD:13792537 NCBI chr 3:53,630,636...53,879,692
Ensembl chr 3:53,630,959...53,876,848
JBrowse link
G Cyp4f39 cytochrome P450, family 4, subfamily f, polypeptide 39 involved_in IBA
ISO
PMID:21873635
(PMID:26056268)
RGD PMID:26056268 PMID:21873635 RGD:13792537 NCBI chr 7:11,426,806...11,505,553
Ensembl chr 7:11,433,371...11,536,181
JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3529540 (MGI:5466789|PMID:22984457)
RGD PMID:22984457 PMID:21873635 MGI:5466789, RGD:13792537 NCBI chr13:93,946,154...93,953,677
Ensembl chr13:93,946,157...93,953,664
JBrowse link
G Degs2 delta(4)-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3694278|PMID:16571104)
RGD PMID:16571104 PMID:21873635 MGI:3694278, RGD:13792537 NCBI chr 6:127,596,063...127,613,293
Ensembl chr 6:127,596,071...127,613,293
JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO (MGI:5532629|PMID:23689133) RGD PMID:23689133 MGI:5532629 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISO
ISS
(PMID:15337768)
(MGI:6245295|PMID:22517924)
GO_REF:0000024
RGD
UniProt
PMID:15337768 PMID:22517924 GO_REF:0000024 MGI:6245295 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153
JBrowse link
G Gba glucosylceramidase beta involved_in ISO (PMID:19279011) RGD PMID:19279011 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G LOC498300 similar to degenerative spermatocyte homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:92,772,654...92,818,811
Ensembl chr13:92,772,649...92,818,574
JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within ISO (MGI:3640029|PMID:16325464) RGD PMID:16325464 MGI:3640029 NCBI chr10:57,618,586...57,633,648
Ensembl chr10:57,618,586...57,633,623
JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (MGI:3640029|PMID:16325464) RGD PMID:16325464 MGI:3640029 NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
JBrowse link
G Pnpla1 patatin-like phospholipase domain containing 1 involved_in ISO (PMID:27751867)
(MGI:5882269|PMID:27751867)
RGD PMID:27751867 MGI:5882269 NCBI chr20:6,918,446...6,951,650
Ensembl chr20:6,917,931...6,952,375
JBrowse link
G RGD1564463 similar to Mdes protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:92,831,549...92,839,257
Ensembl chr13:92,831,537...92,839,246
JBrowse link
G Samd8 sterile alpha motif domain containing 8 involved_in
acts_upstream_of_or_within
ISO (PMID:19506037)
MGI:5749225 (MGI:5632043|PMID:25605874), (MGI:5707904|PMID:25667419)
RGD PMID:19506037 PMID:25605874 PMID:25667419 MGI:5632043 MGI:5707904 NCBI chr15:2,512,104...2,562,368
Ensembl chr15:2,512,105...2,515,379
Ensembl chr15:2,512,105...2,515,379
JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25605874)
(MGI:5632043|PMID:25605874)
RGD PMID:25605874 PMID:21873635 MGI:5632043, RGD:13792537 NCBI chr 1:229,996,673...230,259,591
Ensembl chr 1:229,998,119...230,259,603
JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:4818459 (MGI:5632043|PMID:25605874)
PMID:21873635
Ensembl
RGD
PMID:25605874 PMID:21873635 GO_REF:0000107 MGI:5632043, RGD:13792537 NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IMP
ISO
(MGI:82530|PMID:8706124)
(PMID:17303575), (PMID:18815062), (PMID:19279011), (PMID:20807762), (PMID:8706124)
RGD PMID:8706124 PMID:17303575 PMID:18815062 PMID:19279011 PMID:20807762 More... MGI:82530, RGD:1601344 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12473648 PMID:21873635 RGD:1581395, RGD:13792537 NCBI chr20:44,986,229...44,989,343
Ensembl chr20:44,986,231...44,989,441
JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in ISO
IBA
(PMID:16517606), (PMID:25180167)
(MGI:6450503|PMID:25180167)
PMID:21873635
RGD PMID:16517606 PMID:25180167 PMID:21873635 MGI:6450503, RGD:13792537 NCBI chr11:83,362,534...83,386,257
Ensembl chr11:83,362,534...83,386,250
JBrowse link
G Smpd5 sphingomyelin phosphodiesterase 5 involved_in ISO (MGI:6450238|PMID:21183079) RGD PMID:21183079 MGI:6450238 NCBI chr 7:108,009,182...108,011,767
Ensembl chr 7:108,009,173...108,011,763
JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25691431)
MGI:3815115 (MGI:3814228|PMID:16216550)
RGD PMID:16216550 PMID:25691431 PMID:21873635 MGI:3814228, RGD:13792537 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:25691431)
MGI:3815117 (MGI:3814228|PMID:16216550)
Ensembl
RGD
PMID:16216550 PMID:25691431 PMID:21873635 GO_REF:0000107 MGI:3814228, RGD:13792537 NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542
JBrowse link
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:126,847,878...126,978,010
Ensembl chr 3:126,847,878...126,978,010
JBrowse link
G Sptssa serine palmitoyltransferase, small subunit A involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25691431)
RGD PMID:25691431 PMID:21873635 RGD:13792537 NCBI chr 6:72,144,714...72,156,130
Ensembl chr 6:72,144,714...72,156,214
JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B acts_upstream_of_or_within ISO MGI:5689843 (MGI:5689923|PMID:26438849) RGD PMID:26438849 MGI:5689923 NCBI chr 2:154,133,728...154,162,127
Ensembl chr 2:154,133,733...154,163,120
JBrowse link
G Tlcd3b TLC domain containing 3B acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5490837|PMID:23275342)
PMID:21873635
RGD PMID:23275342 PMID:21873635 MGI:5490837, RGD:13792537 NCBI chr 1:181,421,104...181,439,744
Ensembl chr 1:181,422,830...181,439,743
JBrowse link
ceramide phosphoethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within ISO (MGI:5707904|PMID:25667419) RGD PMID:25667419 MGI:5707904 NCBI chr15:2,512,104...2,562,368
Ensembl chr15:2,512,105...2,515,379
Ensembl chr15:2,512,105...2,515,379
JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5707904|PMID:25667419)
Ensembl
RGD
PMID:25667419 GO_REF:0000107 MGI:5707904 NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546
JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07021955.1 involved_in IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537
G Acat2 acetyl-CoA acetyltransferase 2 involved_in TAS PMID:10806397 UniProt PMID:10806397 RGD:2326086 NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821
JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2180783 (MGI:2180727|PMID:8647961)
RGD PMID:8647961 PMID:21873635 MGI:2180727, RGD:13792537 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoa4 apolipoprotein A4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Apoa5 apolipoprotein A5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:11015575) RGD PMID:11015575 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035
JBrowse link
G Cftr CF transmembrane conductance regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856709 (MGI:3709533|PMID:17085523)
Ensembl
RGD
PMID:17085523 GO_REF:0000107 MGI:3709533 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Cyb5r3 cytochrome b5 reductase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:114,306,686...114,324,247
Ensembl chr 7:114,306,685...114,324,298
JBrowse link
G Dhcr24 24-dehydrocholesterol reductase involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:11519011)
MGI:3027024 (MGI:2686848|PMID:14684813), (MGI:3624168|PMID:16321981), (MGI:3769949|PMID:16513830)
UniProt
RGD
PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 GO_REF:0000024 MGI:2686848 MGI:3624168 MGI:3769949 NCBI chr 5:121,344,637...121,368,853
Ensembl chr 5:121,344,575...121,371,137
JBrowse link
G Dhcr7 7-dehydrocholesterol reductase involved_in TAS
IBA
IEA
ISO
IMP
IC
IDA
PMID:21873635
GO_REF:0000041
(PMID:9465114)
UniProt
RGD
PMID:9465114 PMID:12031495 PMID:21873635 PMID:9831636 PMID:10666310 More... GO_REF:0000041, RGD:625561, RGD:13792537, RGD:2316918, RGD:2316916, RGD:632010 NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055
JBrowse link
G Ebp EBP, cholestenol delta-isomerase involved_in IDA
ISO
IBA
IEA
TAS
(PMID:9894009)
PMID:21873635
GO_REF:0000041
RGD
UniProt
PMID:9894009 PMID:11171067 PMID:21873635 PMID:11171067 GO_REF:0000041, RGD:628445, RGD:13792537, RGD:628445 NCBI chr  X:14,299,427...14,305,826
Ensembl chr  X:14,299,448...14,305,826
JBrowse link
G Fdft1 farnesyl diphosphate farnesyl transferase 1 involved_in TAS
IBA
IMP
PMID:21873635 RGD
GO_Central
PMID:1400448 PMID:21873635 PMID:16440058 RGD:728402, RGD:13792537, RGD:1626611 NCBI chr15:37,412,143...37,440,198
Ensembl chr15:37,412,146...37,440,287
JBrowse link
G Fdps farnesyl diphosphate synthase TAS RGD PMID:1321149 RGD:728501 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:12027950) RGD PMID:12027950 NCBI chr  X:152,201,081...152,220,863
Ensembl chr  X:152,201,098...152,220,801
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within
ISO (PMID:23063590)
(MGI:2180727|PMID:8647961), (MGI:3603484|PMID:15845870), (MGI:70238|PMID:7798939)
RGD PMID:7798939 PMID:8647961 PMID:15845870 PMID:23063590 MGI:2180727 MGI:3603484 MGI:70238 NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703
JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130
JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in
acts_upstream_of_or_within
ISO
IBA
ISS
IEA
(PMID:12829805)
(MGI:2673751|PMID:12829805)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12829805 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:2673751, RGD:13792537 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017
JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in TAS
IEA
GO_REF:0000043 UniProt
RGD
PMID:9228075 GO_REF:0000043, RGD:729078 NCBI chr17:61,629,592...61,637,357
Ensembl chr17:61,629,594...61,637,357
JBrowse link
G Insig1 insulin induced gene 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1920249 (MGI:3689278|PMID:16955138)
(PMID:32322062)
RGD PMID:16955138 PMID:32322062 PMID:21873635 MGI:3689278, RGD:13792537 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952
JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
MGI:1916289 (MGI:3689278|PMID:16955138)
PMID:21873635
(PMID:32322062)
UniProt
RGD
PMID:16955138 PMID:32322062 PMID:21873635 GO_REF:0000024 MGI:3689278, RGD:13792537 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923
JBrowse link
G Lbr lamin B receptor involved_in ISO
IBA
IEA
ISS
(PMID:16784888), (PMID:27336722)
PMID:21873635
(MGI:3822946|PMID:18785926), (MGI:5308142|PMID:22140257)
GO_REF:0000041
GO_REF:0000024
RGD
UniProt
PMID:16784888 PMID:18785926 PMID:22140257 PMID:27336722 PMID:21873635 GO_REF:0000024 GO_REF:0000041 MGI:3822946 MGI:5308142, RGD:13792537 NCBI chr13:93,539,360...93,564,065
Ensembl chr13:93,538,920...93,564,017
JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,504,294...61,507,015
Ensembl chr17:61,504,535...61,507,015
JBrowse link
G LOC103694120 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,420,357...61,423,924 JBrowse link
G LOC120102490 insulin-induced gene 1 protein-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:67,330,399...67,331,371
Ensembl chr 4:67,330,588...67,331,346
JBrowse link
G Lss lanosterol synthase involved_in IMP
IEA
IDA
IBA
ISO
GO_REF:0000107
PMID:7568116
PMID:21873635
(PMID:17186944)
Ensembl
RGD
PMID:17186944 PMID:16440058 PMID:7568116 PMID:21873635 PMID:1429550 GO_REF:0000107, RGD:1626611, RGD:728996, RGD:13792537, RGD:2316919 NCBI chr20:12,091,138...12,118,858
Ensembl chr20:12,092,774...12,118,762
JBrowse link
G Msmo1 methylsterol monooxygenase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:24,980,680...24,997,927
Ensembl chr16:24,980,697...24,998,016
JBrowse link
G Mvd mevalonate diphosphate decarboxylase involved_in NAS
IEA
GO_REF:0000041 UniProt
RGD
PMID:11767099 GO_REF:0000041, RGD:729305 NCBI chr19:50,496,366...50,506,389
Ensembl chr19:50,496,367...50,507,971
JBrowse link
G Mvk mevalonate kinase involved_in TAS
IEA
IBA
ISO
GO_REF:0000043
PMID:21873635
(PMID:1377680)
UniProt
RGD
PMID:1377680 PMID:2158094 PMID:21873635 GO_REF:0000043, RGD:728935, RGD:13792537 NCBI chr12:42,141,391...42,158,858
Ensembl chr12:42,141,384...42,158,882
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:81,071,448...81,091,113
Ensembl chr14:81,071,451...81,091,113
JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:150,775,034...150,807,161
Ensembl chr  X:150,775,080...150,807,142
JBrowse link
G Pmvk phosphomevalonate kinase involved_in IBA
NAS
ISO
PMID:21873635
PMID:10191291
(PMID:8663599)
RGD PMID:8663599 PMID:21873635 PMID:10191291 RGD:13792537, RGD:8553625 NCBI chr 2:174,876,586...174,886,365
Ensembl chr 2:174,876,657...174,886,364
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G RGD1564347 similar to isopentenyl diphosphate delta-isomerase type 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,372,853...61,386,459
Ensembl chr17:61,373,678...61,386,454
JBrowse link
G RGD1564999 similar to isopentenyl-diphosphate delta isomerase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,518,138...61,535,484
Ensembl chr17:61,519,390...61,531,603
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 acts_upstream_of
involved_in
ISO
IEA
MGI:2177958 (MGI:1098057|PMID:9329978)
GO_REF:0000107
RGD
Ensembl
PMID:9329978 GO_REF:0000107 MGI:1098057 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in IEA
IBA
ISO
IDA
GO_REF:0000041
PMID:21873635
(MGI:3822946|PMID:18785926)
PMID:16784888
(PMID:16784888)
UniProt
RGD
PMID:16784888 PMID:18785926 PMID:21873635 PMID:16784888 GO_REF:0000041 MGI:3822946, RGD:13792537, RGD:13825441 NCBI chr 1:203,355,930...203,360,287
Ensembl chr 1:203,355,931...203,360,270
JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp51 cytochrome P450, family 51 IDA RGD PMID:7581240 RGD:2316902 NCBI chr 4:30,036,956...30,055,410
Ensembl chr 4:30,036,865...30,055,410
JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase involved_in ISO (PMID:11519011) RGD PMID:11519011 NCBI chr 5:121,344,637...121,368,853
Ensembl chr 5:121,344,575...121,371,137
JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sc5d sterol-C5-desaturase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:7961720 PMID:21873635 RGD:2316911, RGD:13792537 NCBI chr 8:42,629,649...42,641,257
Ensembl chr 8:42,632,672...42,641,273
JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in IMP
ISO
PMID:19342457
(PMID:19342457)
RGD PMID:19342457 PMID:19342457 RGD:4891166 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IMP PMID:19342457 UniProt PMID:19342457 RGD:4891166 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in ISO (PMID:19342457), (PMID:2022736), (PMID:8506298) RGD PMID:2022736 PMID:8506298 PMID:19342457 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 NOT|involved_in ISO (PMID:9703385)
(PMID:19342457)
RGD PMID:9703385 PMID:19342457 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:124,510,827...124,514,475
Ensembl chr 6:124,510,870...124,513,747
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 involved_in IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:1380156)
Ensembl
RGD
PMID:1380156 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in
acts_upstream_of_or_within
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:5315361|PMID:12925531)
(MGI:52337|PMID:1419907)
(PMID:1380156), (PMID:7592599), (PMID:7947975)
UniProt
RGD
PMID:1380156 PMID:1419907 PMID:7592599 PMID:7947975 PMID:12925531 More... GO_REF:0000024 MGI:52337 MGI:5315361, RGD:13792537 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO MGI:2182095|MGI:5758867 (MGI:6093414|PMID:28973536) RGD PMID:28973536 MGI:6093414 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237
JBrowse link
G Sphk1 sphingosine kinase 1 IDA RGD PMID:18723875 RGD:2311353 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240
JBrowse link
diacylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ang angiogenin involved_in ISO (PMID:2457905) RGD PMID:2457905 NCBI chr15:24,317,733...24,323,361 JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5465510|PMID:23066022)
UniProt
RGD
PMID:23066022 GO_REF:0000024 MGI:5465510 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428
JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in IMP PMID:22905194 UniProt PMID:22905194 RGD:30309909 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639
JBrowse link
G Mogat1 monoacylglycerol O-acyltransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2181469|PMID:12077311)
RGD PMID:12077311 PMID:21873635 MGI:2181469, RGD:13792537 NCBI chr 9:79,980,963...79,988,513
Ensembl chr 9:79,956,649...79,988,513
JBrowse link
G Mogat2 monoacylglycerol O-acyltransferase 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2656067|PMID:12576479), (MGI:3040558|PMID:14966132)
RGD PMID:12576479 PMID:14966132 PMID:21873635 MGI:2656067 MGI:3040558, RGD:13792537 NCBI chr 1:153,521,813...153,545,756
Ensembl chr 1:153,521,815...153,545,756
JBrowse link
G Pla2g15 phospholipase A2, group XV involved_in ISS
ISO
GO_REF:0000024
(MGI:6392937|PMID:17626977)
UniProt
RGD
PMID:17626977 GO_REF:0000024 MGI:6392937 NCBI chr19:34,050,685...34,068,070
Ensembl chr19:34,050,694...34,068,063
JBrowse link
G Plce1 phospholipase C, epsilon 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:29058690)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29058690 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:236,243,445...236,552,571
Ensembl chr 1:236,244,683...236,551,438
JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5465510|PMID:23066022)
UniProt
RGD
PMID:23066022 GO_REF:0000024 MGI:5465510 NCBI chr 1:196,552,723...196,557,805
Ensembl chr 1:196,552,723...196,557,805
JBrowse link
dimethylallyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,629,592...61,637,357
Ensembl chr17:61,629,594...61,637,357
JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,504,294...61,507,015
Ensembl chr17:61,504,535...61,507,015
JBrowse link
G LOC103694120 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,420,357...61,423,924 JBrowse link
G RGD1564347 similar to isopentenyl diphosphate delta-isomerase type 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,372,853...61,386,459
Ensembl chr17:61,373,678...61,386,454
JBrowse link
G RGD1564999 similar to isopentenyl-diphosphate delta isomerase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:61,518,138...61,535,484
Ensembl chr17:61,519,390...61,531,603
JBrowse link
dolichol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 involved_in TAS PMID:10806397 UniProt PMID:10806397 RGD:2326086 NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25066056)
RGD PMID:25066056 PMID:21873635 RGD:13792537 NCBI chr20:31,811,817...31,838,562
Ensembl chr20:31,811,817...31,838,561
JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:32,046,415...32,060,796
Ensembl chr14:32,046,408...32,060,747
JBrowse link
dolichyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490), (PMID:32817466) RGD PMID:28842490 PMID:32817466 NCBI chr 5:146,198,359...146,224,479
Ensembl chr 5:146,197,457...146,224,454
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490), (PMID:32817466) RGD PMID:28842490 PMID:32817466 NCBI chr20:31,811,817...31,838,562
Ensembl chr20:31,811,817...31,838,561
JBrowse link
dolichyl monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dolk dolichol kinase involved_in ISO
IBA
(PMID:12213788), (PMID:16923818)
PMID:21873635
RGD PMID:12213788 PMID:16923818 PMID:21873635 RGD:13792537 NCBI chr 3:13,557,826...13,559,864
Ensembl chr 3:13,557,817...13,559,917
JBrowse link
estrogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IDA estrone RGD PMID:19665544 RGD:4891164 NCBI chr 8:54,553,165...54,580,758
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Hsd17b1 hydroxysteroid (17-beta) dehydrogenase 1 involved_in IDA
IBA
ISO
IEA
estradiol
PMID:21873635
(MGI:1267145|PMID:9658408)
GO_REF:0000041
(PMID:8994190)
RGD
UniProt
PMID:8994190 PMID:9658408 PMID:8612487 PMID:21873635 GO_REF:0000041 MGI:1267145, RGD:728619, RGD:13792537 NCBI chr10:86,009,728...86,011,928
Ensembl chr10:86,009,728...86,011,927
JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:79,990,048...80,113,556
Ensembl chr 3:79,990,056...80,113,617
JBrowse link
G Hsd17b2 hydroxysteroid (17-beta) dehydrogenase 2 involved_in IDA
IEA
ISO
estrone
GO_REF:0000107
(PMID:11940569)
Ensembl
RGD
PMID:11940569 PMID:8612487 GO_REF:0000107, RGD:728619 NCBI chr19:45,753,576...45,825,203
Ensembl chr19:45,753,574...45,825,202
JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in IDA
ISO
IEA
PMID:9658408
(MGI:1267145|PMID:9658408), (MGI:2662631|PMID:12732193)
(PMID:12732193)
GO_REF:0000107
GO_REF:0000041
RGD
Ensembl
UniProt
PMID:9658408 PMID:12732193 PMID:9658408 GO_REF:0000041 GO_REF:0000107 MGI:1267145 MGI:2662631, RGD:30309934 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017
JBrowse link
G Hsd17b8 hydroxysteroid (17-beta) dehydrogenase 8 involved_in IBA
IEA
ISO
ISS
PMID:21873635
GO_REF:0000107
(PMID:17978863)
GO_REF:0000024
GO_REF:0000041
Ensembl
RGD
UniProt
PMID:17978863 PMID:21873635 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107, RGD:13792537 NCBI chr20:4,826,725...4,828,742
Ensembl chr20:4,822,026...4,828,742
JBrowse link
G Rdh8 retinol dehydrogenase 8 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:19,353,191...19,360,462
Ensembl chr 8:19,353,191...19,360,462
JBrowse link
G Star steroidogenic acute regulatory protein IMP estradiol; positive regulation RGD PMID:16579833 RGD:1600078 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
ether lipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agps alkylglycerone phosphate synthase involved_in IEA
ISS
GO_REF:0000041
GO_REF:0000024
UniProt GO_REF:0000024 GO_REF:0000041 NCBI chr 3:60,747,323...60,845,831
Ensembl chr 3:60,747,323...60,845,830
JBrowse link
G Dhrs7b dehydrogenase/reductase 7B involved_in ISO MGI:5749209 (MGI:5630041|PMID:25565205) RGD PMID:25565205 MGI:5630041 NCBI chr10:45,504,344...45,537,094
Ensembl chr10:45,504,426...45,537,076
JBrowse link
G Far1 fatty acyl CoA reductase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:20071337), (PMID:24108123)
UniProt
Ensembl
RGD
PMID:20071337 PMID:24108123 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:167,644,622...167,705,868
Ensembl chr 1:167,644,677...167,705,730
JBrowse link
G Fasn fatty acid synthase involved_in ISO MGI:3765070 (MGI:5630041|PMID:25565205) RGD PMID:25565205 MGI:5630041 NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:15687349)
MGI:2670461 (MGI:2669056|PMID:12874108)
PMID:21873635
RGD PMID:12874108 PMID:15687349 PMID:21873635 MGI:2669056, RGD:13792537 NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361
JBrowse link
G Peds1 plasmanylethanolamine desaturase 1 involved_in IBA
ISO
PMID:21873635
(MGI:6404352|PMID:32209662)
(PMID:31604315), (PMID:32209662)
RGD PMID:31604315 PMID:32209662 PMID:21873635 MGI:6404352, RGD:13792537 NCBI chr 3:156,350,135...156,369,309
Ensembl chr 3:156,349,526...156,369,314
JBrowse link
G Pex7 peroxisomal biogenesis factor 7 involved_in ISO (PMID:12522768), (PMID:9090383) RGD PMID:9090383 PMID:12522768 NCBI chr 1:14,582,698...14,646,686
Ensembl chr 1:14,582,699...14,646,748
JBrowse link
farnesyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdps farnesyl diphosphate synthase involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt
RGD
PMID:8188698 PMID:21873635 GO_REF:0000041, RGD:2316305, RGD:13792537 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776
JBrowse link
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220
JBrowse link
farnesyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130
JBrowse link
fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034648.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO
ISS
(PMID:25168382)
GO_REF:0000024
RGD
UniProt
PMID:25168382 GO_REF:0000024 NCBI chr 2:209,852,087...209,905,763
Ensembl chr 2:209,852,087...209,906,020
JBrowse link
G Acaca acetyl-CoA carboxylase alpha involved_in IDA
IBA
ISO
IEA
PMID:21873635
(MGI:4840155|PMID:20952656)
GO_REF:0000043
RGD
UniProt
PMID:20952656 PMID:11735100 PMID:21873635 GO_REF:0000043 MGI:4840155, RGD:2317316, RGD:13792537 NCBI chr10:69,014,261...69,276,453
Ensembl chr10:69,014,170...69,276,457
JBrowse link
G Acacb acetyl-CoA carboxylase beta acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3700580|PMID:17210641)
PMID:21873635
RGD PMID:17210641 PMID:21873635 MGI:3700580, RGD:13792537 NCBI chr12:42,365,800...42,477,651
Ensembl chr12:42,366,548...42,457,655
JBrowse link
G Acly ATP citrate lyase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11735100 PMID:21873635 RGD:2317316, RGD:13792537 NCBI chr10:85,412,045...85,464,253
Ensembl chr10:85,412,049...85,463,320
JBrowse link
G Acsf3 acyl-CoA synthetase family member 3 involved_in IBA
ISO
PMID:21873635
(PMID:21846720)
RGD PMID:21846720 PMID:21873635 RGD:13792537 NCBI chr19:50,835,116...50,875,557
Ensembl chr19:50,835,221...50,875,553
JBrowse link
G Acsl3 acyl-CoA synthetase long-chain family member 3 IDA RGD PMID:8663269 RGD:70280 NCBI chr 9:80,140,996...80,164,636
Ensembl chr 9:80,115,112...80,164,627
JBrowse link
G Acsm1 acyl-CoA synthetase medium-chain family member 1 acts_upstream_of_or_within ISO (MGI:2150539|PMID:11470804) RGD PMID:11470804 MGI:2150539 NCBI chr 1:173,985,715...174,020,565
Ensembl chr 1:173,984,672...174,025,495
JBrowse link
G Acsm2 acyl-CoA synthetase medium-chain family member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:173,916,368...173,955,116
Ensembl chr 1:173,916,368...173,955,116
JBrowse link
G Acsm3 acyl-CoA synthetase medium-chain family member 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2150539|PMID:11470804)
RGD PMID:11470804 PMID:21873635 MGI:2150539, RGD:13792537 NCBI chr 1:174,133,260...174,159,966
Ensembl chr 1:174,133,288...174,160,184
JBrowse link
G Acsm4 acyl-CoA synthetase medium-chain family member 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:174,053,931...174,078,345
Ensembl chr 1:174,053,931...174,078,341
JBrowse link
G Acsm5 acyl-CoA synthetase medium-chain family member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:173,870,873...173,896,838
Ensembl chr 1:173,863,041...173,898,588
JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Cbr4 carbonyl reductase 4 involved_in ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000041
UniProtKB:Q92506 (PMID:25203508)
PMID:21873635
UniProt
RGD
PMID:25203508 PMID:21873635 GO_REF:0000024 GO_REF:0000041, RGD:13792537 NCBI chr16:28,629,928...28,684,230
Ensembl chr16:28,617,224...28,645,712
JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:93,946,154...93,953,677
Ensembl chr13:93,946,157...93,953,664
JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153
JBrowse link
G Fads6 fatty acid desaturase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:100,522,981...100,538,181
Ensembl chr10:100,522,981...100,538,181
JBrowse link
G Fasn fatty acid synthase involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
IEA
PMID:21873635
(MGI:5426758|PMID:22331133)
GO_REF:0000041
RGD
UniProt
PMID:22331133 PMID:15715522 PMID:21873635 GO_REF:0000041 MGI:5426758, RGD:2317317, RGD:13792537 NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384429 (MGI:1889102|PMID:10852923) RGD PMID:10852923 MGI:1889102 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:79,990,048...80,113,556
Ensembl chr 3:79,990,056...80,113,617
JBrowse link
G Hsd17b8 hydroxysteroid (17-beta) dehydrogenase 8 involved_in ISO
IBA
IEA
ISS
UniProtKB:Q8N4T8 (PMID:25203508)
PMID:21873635
GO_REF:0000107
GO_REF:0000041
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25203508 PMID:21873635 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107, RGD:13792537 NCBI chr20:4,826,725...4,828,742
Ensembl chr20:4,822,026...4,828,742
JBrowse link
G Kmt2d lysine methyltransferase 2D involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325
JBrowse link
G Lipc lipase C, hepatic type involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:182536)
Ensembl
RGD
PMID:182536 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Lipg lipase G, endothelial type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:68,514,923...68,536,105
Ensembl chr18:68,514,923...68,536,260
JBrowse link
G Liph lipase H involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:79,032,229...79,081,625
Ensembl chr11:79,033,312...79,081,625
JBrowse link
G Lipi lipase I involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:14,189,323...14,228,992
Ensembl chr11:14,189,323...14,228,985
JBrowse link
G Lpl lipoprotein lipase involved_in IBA
ISO
PMID:21873635
(PMID:182536)
RGD PMID:182536 PMID:21873635 RGD:13792537 NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249
JBrowse link
G Mcat malonyl-CoA-acyl carrier protein transacylase involved_in ISO
IBA
IEA
(PMID:12882974)
PMID:21873635
GO_REF:0000041
RGD
UniProt
PMID:12882974 PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 7:114,693,612...114,705,677
Ensembl chr 7:114,693,612...114,704,542
JBrowse link
G Mecr mitochondrial trans-2-enoyl-CoA reductase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:144,029,684...144,056,373
Ensembl chr 5:144,029,731...144,055,863
JBrowse link
G Mgll monoglyceride lipase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:121,192,187...121,294,187
Ensembl chr 4:121,192,195...121,294,179
JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in IMP
ISO
PMID:15105298
(PMID:15003260)
RGD PMID:15003260 PMID:15105298 RGD:1600796 NCBI chr19:47,447,931...47,463,794
Ensembl chr19:47,447,970...47,463,793
JBrowse link
G Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:176,644,696...176,658,131
Ensembl chr 1:176,644,703...176,658,099
JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:9,210,443...9,215,852
Ensembl chr15:9,210,547...9,214,558
JBrowse link
G Pecr peroxisomal trans-2-enoyl-CoA reductase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 9:73,897,877...73,926,511
Ensembl chr 9:73,897,880...73,926,511
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO
IBA
IDA
(PMID:1918029)
PMID:21873635
RGD PMID:1918029 PMID:21873635 PMID:1918029 RGD:13792537, RGD:8553780 NCBI chr12:41,142,193...41,151,967
Ensembl chr12:41,142,200...41,153,226
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:40,588,140...40,598,673
Ensembl chr12:40,588,211...40,598,661
JBrowse link
G Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:185,257,218...185,272,846
Ensembl chr 2:185,257,213...185,269,872
JBrowse link
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:129,963,105...129,980,532
Ensembl chr 7:129,963,105...129,980,561
JBrowse link
G Scd stearoyl-CoA desaturase acts_upstream_of_or_within TAS
ISO
MGI:2388371 (MGI:2673743|PMID:12815040) RGD PMID:12815040 PMID:12896875 MGI:2673743, RGD:1304415 NCBI chr 1:243,269,745...243,282,878
Ensembl chr 1:243,269,747...243,282,562
JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 involved_in TAS
IEA
GO_REF:0000043 UniProt
RGD
PMID:16207839 GO_REF:0000043, RGD:1580018 NCBI chr 1:243,169,171...243,182,231
Ensembl chr 1:243,169,236...243,182,232
JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 acts_upstream_of_or_within ISO (MGI:2673743|PMID:12815040) RGD PMID:12815040 MGI:2673743 NCBI chr 1:243,203,433...243,216,007
Ensembl chr 1:243,203,881...243,215,148
JBrowse link
fatty acid elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6189658|PMID:26108493)
UniProt
RGD
PMID:26108493 GO_REF:0000024 MGI:6189658 NCBI chr  X:151,428,334...151,450,115
Ensembl chr  X:151,428,578...151,450,115
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 acts_upstream_of_or_within ISO (MGI:2153981|PMID:11567032) RGD PMID:11567032 MGI:2153981 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO
IBA
(PMID:18554506)
PMID:21873635
RGD PMID:18554506 PMID:21873635 RGD:13792537 NCBI chr17:77,081,508...77,106,114
Ensembl chr17:77,083,740...77,106,073
JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 involved_in ISO
IEA
(PMID:18554506)
GO_REF:0000107
RGD
Ensembl
PMID:18554506 GO_REF:0000107 NCBI chr11:65,667,671...65,762,903
Ensembl chr11:65,670,281...65,762,889
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO
IBA
(PMID:18554506)
PMID:21873635
RGD PMID:18554506 PMID:21873635 RGD:13792537 NCBI chr 8:65,501,240...65,538,507
Ensembl chr 8:65,501,240...65,538,507
JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 involved_in IBA
ISO
PMID:21873635
(PMID:18554506)
RGD PMID:18554506 PMID:21873635 RGD:13792537 NCBI chr 5:102,887,597...102,915,376
Ensembl chr 5:102,887,588...102,915,338
JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in ISS
ISO
GO_REF:0000024
(PMID:12482854)
UniProt
RGD
PMID:12482854 GO_REF:0000024 NCBI chr19:24,526,705...24,568,168
Ensembl chr19:24,541,615...24,568,168
JBrowse link
fatty acid elongation, monounsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in IBA
ISO
PMID:21873635
(PMID:20166112)
RGD PMID:20166112 PMID:21873635 RGD:13792537 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:23,544,520...23,584,855
Ensembl chr17:23,544,568...23,584,848
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO
IBA
(PMID:20937905)
(MGI:3033509|PMID:14581464)
PMID:21873635
RGD PMID:14581464 PMID:20937905 PMID:21873635 MGI:3033509, RGD:13792537 NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IBA
ISO
ISS
PMID:21873635
(PMID:20427700)
GO_REF:0000024
RGD
UniProt
PMID:20427700 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:78,790,799...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IDA
IBA
PMID:12005057
PMID:21873635
UniProt
GO_Central
PMID:12005057 PMID:21873635 RGD:8554529, RGD:13792537 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
JBrowse link
fatty acid elongation, polyunsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IBA
ISO
PMID:21873635
(MGI:4939101|PMID:21106902), (MGI:4943668|PMID:12371743)
(PMID:12371743), (PMID:20937905)
RGD PMID:12371743 PMID:20937905 PMID:21106902 PMID:21873635 MGI:4939101 MGI:4943668, RGD:13792537 NCBI chr17:23,544,520...23,584,855
Ensembl chr17:23,544,568...23,584,848
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO
IBA
(PMID:20937905)
PMID:21873635
RGD PMID:20937905 PMID:21873635 RGD:13792537 NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IBA
ISO
PMID:21873635
(MGI:5471863|PMID:23479632)
RGD PMID:23479632 PMID:21873635 MGI:5471863, RGD:13792537 NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IBA
ISO
IDA
PMID:21873635
(PMID:20427700), (PMID:20937905)
PMID:12005057
RGD PMID:20427700 PMID:20937905 PMID:21873635 PMID:12005057 RGD:13792537, RGD:8554529 NCBI chr 8:78,790,799...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IBA
ISO
IEA
PMID:21873635
(PMID:20937905)
GO_REF:0000107
RGD
Ensembl
PMID:20937905 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
JBrowse link
fatty acid elongation, saturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO
IBA
(PMID:20166112), (PMID:20937905)
PMID:21873635
RGD PMID:20166112 PMID:20937905 PMID:21873635 RGD:13792537 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:23,544,520...23,584,855
Ensembl chr17:23,544,568...23,584,848
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO
IBA
(PMID:20937905)
PMID:21873635
(MGI:3033509|PMID:14581464)
RGD PMID:14581464 PMID:20937905 PMID:21873635 MGI:3033509, RGD:13792537 NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in ISO
IBA
(PMID:20937905)
PMID:21873635
RGD PMID:20937905 PMID:21873635 RGD:13792537 NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:78,790,799...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO
IBA
IDA
UniProtKB:Q9VV87 (PMID:20937905), (PMID:26214738)
PMID:21873635
PMID:12005057
RGD PMID:20937905 PMID:26214738 PMID:21873635 PMID:12005057 RGD:13792537, RGD:8554529 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in ISO
IBA
IEA
(PMID:19826053)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:19826053 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
JBrowse link
fatty acid primary amide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pam peptidylglycine alpha-amidating monooxygenase involved_in IDA PMID:10079066 UniProt PMID:10079066 RGD:14390048 NCBI chr 9:97,998,581...98,271,966
Ensembl chr 9:98,122,916...98,271,965
JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 Beta-1,3-galactosyltransferase 1 involved_in ISO (PMID:9582303) RGD PMID:9582303 NCBI chr 3:52,253,413...52,826,508
Ensembl chr 3:52,253,618...52,825,313
JBrowse link
G B3galt2 Beta-1,3-galactosyltransferase 2 involved_in ISO (PMID:9582303) RGD PMID:9582303 NCBI chr13:55,389,406...55,398,419
Ensembl chr13:55,389,406...55,398,419
JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 involved_in IBA
ISO
PMID:21873635
(PMID:9405390)
RGD PMID:9405390 PMID:21873635 RGD:13792537 NCBI chr13:83,691,378...83,697,448
Ensembl chr13:83,691,446...83,697,448
JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISS
ISO
IMP
IEA
GO_REF:0000024
(MGI:3696647|PMID:15658937), (MGI:3826747|PMID:18815260)
PMID:17901466
GO_REF:0000041
UniProt
RGD
PMID:15658937 PMID:18815260 PMID:17901466 GO_REF:0000024 GO_REF:0000041 MGI:3696647 MGI:3826747, RGD:13825191 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153
JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:1355015|PMID:10727929)
RGD PMID:10727929 PMID:21873635 MGI:1355015, RGD:13792537 NCBI chr14:78,868,049...78,886,402
Ensembl chr14:78,870,793...78,886,388
JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IDA
IBA
IEA
PMID:8713090
PMID:21873635
GO_REF:0000041
UniProt PMID:8713090 PMID:21873635 GO_REF:0000041, RGD:39458006, RGD:13792537 NCBI chr 2:214,264,483...214,332,769
Ensembl chr 2:214,264,483...214,332,660
JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt4 Beta-1,3-galactosyltransferase 4 involved_in ISO (PMID:9582303) RGD PMID:9582303 NCBI chr20:4,936,089...4,937,664
Ensembl chr20:4,931,768...4,938,315
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IDA
ISS
PMID:21873635
(MGI:83232|PMID:8855236)
MGI:2158349|MGI:96074 (MGI:1331265|PMID:10021458)
PMID:3140234
(PMID:1601877), (PMID:7487055), (PMID:7890749)
GO_REF:0000024
RGD
UniProt
PMID:1601877 PMID:7487055 PMID:7890749 PMID:8855236 PMID:10021458 More... GO_REF:0000024 MGI:1331265 MGI:83232, RGD:13792537, RGD:21201261 NCBI chr 7:62,988,429...62,996,190
Ensembl chr 7:62,988,930...62,996,190
JBrowse link
G Rps18 ribosomal protein S18 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:4,931,427...4,935,538
Ensembl chr10:101,204,500...101,205,146
Ensembl chr20:101,204,500...101,205,146
JBrowse link
G Rps18l1 ribosomal protein S18-like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:101,204,519...101,205,067
Ensembl chr10:101,204,500...101,205,146
JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:242,129,755...242,645,120
Ensembl chr 2:242,129,763...242,645,133
JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:241,741,933...241,911,214
Ensembl chr 2:241,742,688...241,911,208
JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 acts_upstream_of_or_within ISO (MGI:1354410|PMID:10702226) RGD PMID:10702226 MGI:1354410 NCBI chr 3:15,894,278...15,907,502
Ensembl chr 3:15,885,968...15,907,496
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in ISO (PMID:10766765) RGD PMID:10766765 NCBI chr 1:127,766,669...127,838,017
Ensembl chr 1:127,762,573...127,838,091
JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in ISO (PMID:10766765) RGD PMID:10766765 NCBI chr18:57,754,349...57,760,839
Ensembl chr18:57,754,347...57,760,839
JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in ISO (PMID:10766765) RGD PMID:10766765 NCBI chr 9:95,994,150...96,084,617
Ensembl chr 9:95,993,503...96,084,653
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in ISO (MGI:2182536|PMID:11980897) RGD PMID:11980897 MGI:2182536 NCBI chr17:76,740,755...76,883,766
Ensembl chr17:76,745,224...76,884,299
JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6196231|PMID:30114188) RGD PMID:30114188 MGI:6196231 NCBI chr 3:156,018,056...156,033,983
Ensembl chr 3:156,018,053...156,070,074
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:6196231|PMID:30114188)
UniProt
RGD
PMID:30114188 GO_REF:0000024 MGI:6196231 NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247
JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (PMID:8027041)
(MGI:65558|PMID:8144500)
RGD PMID:8027041 PMID:8144500 MGI:65558 NCBI chr 7:98,845,270...98,913,409
Ensembl chr 7:98,845,270...98,913,236
JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IDA
IBA
IEA
ISO
PMID:8144500
PMID:21873635
GO_REF:0000107
(MGI:6467685|PMID:22735313), (MGI:65558|PMID:8144500)
(PMID:8920913)
Ensembl
RGD
PMID:8144500 PMID:8920913 PMID:22735313 PMID:8144500 PMID:21873635 GO_REF:0000107 MGI:6467685 MGI:65558, RGD:68307, RGD:13792537 NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869
JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:6467685|PMID:22735313)
Ensembl
RGD
PMID:22735313 GO_REF:0000107 MGI:6467685 NCBI chr 5:131,470,348...131,670,794
Ensembl chr 5:131,470,348...131,670,810
JBrowse link
geranyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdps farnesyl diphosphate synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776
JBrowse link
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220
JBrowse link
geranylgeranyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220
JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4galt alpha 1,4-galactosyltransferase (P blood group) acts_upstream_of_or_within ISO MGI:3624807|MGI:5445373 (MGI:3623723|PMID:16476743), (MGI:5445364|PMID:22875802) RGD PMID:16476743 PMID:22875802 MGI:3623723 MGI:5445364 NCBI chr 7:114,368,525...114,392,872
Ensembl chr 7:114,368,276...114,396,071
JBrowse link
globoside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO
IEA
ISS
(PMID:12716912)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12716912 GO_REF:0000024 GO_REF:0000107 NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869
JBrowse link
glucocorticoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crh corticotropin releasing hormone acts_upstream_of_or_within ISO MGI:1857392 (MGI:1860037|PMID:10861000) RGD PMID:10861000 MGI:1860037 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IDA
IBA
corticosterone
PMID:21873635
RGD
GO_Central
PMID:19665544 PMID:21873635 RGD:4891164, RGD:13792537 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IDA
IBA
corticosterone, 18-hydroxycorticosterone
PMID:21873635
RGD
GO_Central
PMID:11832364 PMID:21873635 RGD:727991, RGD:13792537 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 acts_upstream_of_or_within ISO (MGI:1336546|PMID:10224232), (MGI:50073|PMID:1686470), (MGI:80407|PMID:8645611) RGD PMID:1686470 PMID:8645611 PMID:10224232 MGI:1336546 MGI:50073 MGI:80407 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:77279|PMID:7588219)
GO_REF:0000041
Ensembl
RGD
UniProt
PMID:7588219 GO_REF:0000041 GO_REF:0000107 MGI:77279 NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573
JBrowse link
G Cyp21a1 cytochrome P450, family 21, subfamily a, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,020,217...4,026,923
Ensembl chr20:4,023,767...4,026,923
JBrowse link
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 IDA RGD PMID:12460758 RGD:1625060 NCBI chr13:104,728,539...104,798,884
Ensembl chr13:104,728,539...104,788,687
JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase involved_in ISS
ISO
GO_REF:0000024
(MGI:5285470|PMID:21628453)
UniProt
RGD
PMID:21628453 GO_REF:0000024 MGI:5285470 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153
JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in IBA
ISO
ISS
PMID:21873635
(MGI:2180222|PMID:10430909), (MGI:3603060|PMID:16109770), (MGI:5448789|PMID:22851168), (MGI:5510915|PMID:23748427)
GO_REF:0000024
(PMID:8643456)
RGD
UniProt
PMID:8643456 PMID:10430909 PMID:16109770 PMID:22851168 PMID:23748427 More... GO_REF:0000024 MGI:2180222 MGI:3603060 MGI:5448789 MGI:5510915, RGD:13792537 NCBI chr 5:74,032,978...74,065,701
Ensembl chr 5:74,032,978...74,065,393
JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IDA
PMID:21873635
MGI:2182390 (MGI:2157262|PMID:11792850)
PMID:4186849
RGD PMID:11792850 PMID:21873635 PMID:4186849 MGI:2157262, RGD:13792537, RGD:8553288 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,027,891...29,036,729
Ensembl chr15:29,027,894...29,037,283
JBrowse link
glycerophospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO (MGI:3581335|PMID:15870270) RGD PMID:15870270 MGI:3581335 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:17482562) RGD PMID:17482562 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Crls1 cardiolipin synthase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:120,119,822...120,138,674
Ensembl chr 3:120,119,852...120,138,655
JBrowse link
G Far1 fatty acyl CoA reductase 1 involved_in ISO
IEA
(PMID:20071337)
GO_REF:0000107
RGD
Ensembl
PMID:20071337 GO_REF:0000107 NCBI chr 1:167,644,622...167,705,868
Ensembl chr 1:167,644,677...167,705,730
JBrowse link
G Hdhd5 haloacid dehalogenase like hydrolase domain containing 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:153,701,026...153,753,303
Ensembl chr 4:153,718,791...153,753,277
JBrowse link
glycolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal3st3 galactose-3-O-sulfotransferase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:202,593,692...202,603,446
Ensembl chr 1:202,593,692...202,603,445
JBrowse link
G Gal3st4 galactose-3-O-sulfotransferase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:17,267,963...17,276,951
Ensembl chr12:17,267,963...17,276,833
JBrowse link
G Sccpdh saccharopine dehydrogenase (putative) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,400,120...91,421,875
Ensembl chr13:91,400,190...91,422,222
JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO (PMID:9266697) RGD PMID:9266697 NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in ISO
IBA
(PMID:8288606)
PMID:21873635
RGD PMID:8288606 PMID:21873635 RGD:13792537 NCBI chr 8:33,415,666...33,465,365
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 acts_upstream_of_or_within ISO (MGI:2182536|PMID:11980897) RGD PMID:11980897 MGI:2182536 NCBI chr17:76,740,755...76,883,766
Ensembl chr17:76,745,224...76,884,299
JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 acts_upstream_of_or_within
involved_in
IDA
ISO
PMID:10854427
MGI:1347344|MGI:3512453 (MGI:5445364|PMID:22875802)
PMID:12626403
RGD PMID:22875802 PMID:10854427 PMID:10854427 PMID:12626403 MGI:5445364, RGD:1299594, RGD:1299594, RGD:632674 NCBI chr 5:141,101,329...141,113,760
Ensembl chr 5:141,107,983...141,115,641
JBrowse link
G A4galt alpha 1,4-galactosyltransferase (P blood group) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:114,368,525...114,392,872
Ensembl chr 7:114,368,276...114,396,071
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in IDA PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr 7:62,988,429...62,996,190
Ensembl chr 7:62,988,930...62,996,190
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:9593693 PMID:21873635 RGD:70807, RGD:13792537 NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247
JBrowse link
G Fut4 fucosyltransferase 4 involved_in ISO
ISS
(PMID:29593094)
GO_REF:0000024
RGD
UniProt
PMID:29593094 GO_REF:0000024 NCBI chr 8:11,586,721...11,590,682
Ensembl chr 8:11,586,721...11,590,682
JBrowse link
G Fut9 fucosyltransferase 9 involved_in ISO
ISS
(PMID:29593094)
GO_REF:0000024
RGD
UniProt
PMID:29593094 GO_REF:0000024 NCBI chr 5:39,351,815...39,565,256
Ensembl chr 5:39,351,819...39,565,130
JBrowse link
G LOC367454 similar to Alpha-(1,3)-fucosyltransferase (Galactoside 3-L-fucosyltransferase) (Fucosyltransferase 6) (FUCT-VI) involved_in ISO (PMID:29593094) RGD PMID:29593094 NCBI chr 9:1,569,605...1,572,022 JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISO (MGI:1346847|PMID:10521438) RGD PMID:10521438 MGI:1346847 NCBI chr 2:241,741,933...241,911,214
Ensembl chr 2:241,742,688...241,911,208
JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in IDA PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr18:70,736,632...70,802,537
Ensembl chr18:70,736,602...70,797,789
JBrowse link
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in ISO (PMID:30660999) RGD PMID:30660999 NCBI chr15:99,201,556...99,254,054
Ensembl chr15:99,201,489...99,254,049
JBrowse link
G Ugt8 UDP glycosyltransferase 8 TAS RGD PMID:7521399 RGD:70050 NCBI chr 2:214,264,483...214,332,769
Ensembl chr 2:214,264,483...214,332,660
JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cwh43 cell wall biogenesis 43 C-terminal homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:34,754,279...34,800,530
Ensembl chr14:34,754,289...34,800,814
JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1329093|PMID:9535917)
PMID:21873635
(PMID:9535917), (PMID:9724629)
(PMID:10835346), (PMID:9535917)
RGD PMID:9535917 PMID:9724629 PMID:10835346 PMID:21873635 MGI:1329093, RGD:13792537 NCBI chr 3:156,919,979...156,939,522
Ensembl chr 3:156,919,979...156,939,536
JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in
acts_upstream_of_or_within
TAS
IBA
IDA
ISO
PMID:21873635
PMID:9724629
(PMID:10835346), (PMID:16162815)
RGD PMID:10835346 PMID:16162815 PMID:9724629 PMID:21873635 PMID:9724629 RGD:69827, RGD:13792537, RGD:69827 NCBI chr 3:15,855,952...15,858,867 JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in IBA
ISO
PMID:21873635
(PMID:10835346)
RGD PMID:10835346 PMID:21873635 RGD:13792537 NCBI chr 2:174,676,532...174,677,047
Ensembl chr 2:174,676,363...174,677,668
JBrowse link
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 TAS RGD PMID:10702226 RGD:1331364 NCBI chr 7:108,051,896...108,055,479
Ensembl chr 7:108,051,861...108,055,484
JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in ISO
ISS
(PMID:29374258)
GO_REF:0000024
RGD
UniProt
PMID:29374258 GO_REF:0000024 NCBI chr18:60,763,418...60,781,553
Ensembl chr18:60,763,419...60,781,553
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 IMP RGD PMID:14734546 RGD:1303970 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
JBrowse link
G Pgap2 post-GPI attachment to proteins 2 involved_in IBA
IEA
IMP
ISO
PMID:21873635
GO_REF:0000043
PMID:16407401
(PMID:29374258)
UniProt
RGD
PMID:29374258 PMID:21873635 PMID:16407401 GO_REF:0000043, RGD:13792537, RGD:8553507 NCBI chr 1:156,591,540...156,618,116
Ensembl chr 1:156,591,615...156,618,114
JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in ISO
IBA
(PMID:29374258)
PMID:21873635
RGD PMID:29374258 PMID:21873635 RGD:13792537 NCBI chr10:83,387,113...83,399,357
Ensembl chr10:83,387,113...83,398,628
JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:29374258)
PMID:21873635
UniProt
RGD
PMID:29374258 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:63,931,916...63,947,004
Ensembl chr 5:63,930,682...63,951,716
JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis, class A involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000041
PMID:21873635
MGI:3652879 (MGI:80283|PMID:8611683)
UniProt
RGD
PMID:8611683 PMID:21873635 GO_REF:0000041 MGI:80283, RGD:13792537 NCBI chr  X:30,043,033...30,055,861
Ensembl chr  X:30,042,343...30,055,804
JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis, class B involved_in ISO
IBA
(PMID:8861954)
PMID:21873635
RGD PMID:8861954 PMID:21873635 RGD:13792537 NCBI chr 8:73,751,756...73,775,679
Ensembl chr 8:73,751,798...73,775,679
JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis, class C involved_in ISO
IEA
ISS
(PMID:16162815), (PMID:27694521)
GO_REF:0000041
GO_REF:0000024
RGD
UniProt
PMID:16162815 PMID:27694521 GO_REF:0000024 GO_REF:0000041 NCBI chr13:74,343,619...74,346,148
Ensembl chr13:74,296,854...74,346,211
JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis, class F involved_in IEA
IBA
ISO
GO_REF:0000041
PMID:21873635
(PMID:33386993)
(MGI:1860649|PMID:10781593)
UniProt
RGD
PMID:10781593 PMID:33386993 PMID:21873635 GO_REF:0000041 MGI:1860649, RGD:13792537 NCBI chr 6:7,589,528...7,617,721
Ensembl chr 6:7,589,570...7,639,675
JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis, class G involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(PMID:15632136)
GO_REF:0000041
RGD
UniProt
PMID:15632136 PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr14:1,404,911...1,433,199
Ensembl chr14:1,406,798...1,433,187
JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis, class H involved_in ISO
IEA
IBA
(PMID:16162815)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:16162815 PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 6:97,874,903...97,897,188
Ensembl chr 6:97,882,903...97,897,142
JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis, class L involved_in IDA
IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt
RGD
PMID:9188481 PMID:21873635 GO_REF:0000041, RGD:729509, RGD:13792537 NCBI chr10:47,142,160...47,199,892
Ensembl chr10:47,141,780...47,200,145
JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis, class M involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt
RGD
PMID:11226175 PMID:21873635 GO_REF:0000041, RGD:70624, RGD:13792537 NCBI chr13:84,838,329...84,842,026
Ensembl chr13:84,838,175...84,843,381
JBrowse link
G Pign phosphatidylinositol glycan anchor biosynthesis, class N involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr13:21,659,092...21,812,932
Ensembl chr13:21,662,455...21,806,790
JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis, class O involved_in IEA
ISO
IBA
GO_REF:0000041
(MGI:1860649|PMID:10781593)
PMID:21873635
UniProt
RGD
PMID:10781593 PMID:21873635 GO_REF:0000041 MGI:1860649, RGD:13792537 NCBI chr 5:57,244,721...57,256,252
Ensembl chr 5:57,245,166...57,254,146
JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis, class P involved_in
acts_upstream_of_or_within
ISO (PMID:16162815), (PMID:28334793)
(MGI:3804747|PMID:10944123)
RGD PMID:10944123 PMID:16162815 PMID:28334793 MGI:3804747 NCBI chr11:33,682,943...33,689,071
Ensembl chr11:33,682,948...33,689,321
JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis, class Q involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:16162815)
PMID:21873635
PomBase:SPBC30D10.11|SGD:S000003448 (MGI:1307040|PMID:9729469), (MGI:1339481|PMID:10373468)
RGD PMID:9729469 PMID:10373468 PMID:16162815 PMID:21873635 MGI:1307040 MGI:1339481, RGD:13792537 NCBI chr10:14,942,571...14,958,584
Ensembl chr10:14,942,577...14,958,584
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U involved_in ISO (PMID:15034568) RGD PMID:15034568 NCBI chr 3:143,784,831...143,881,268
Ensembl chr 3:143,784,832...143,880,807
JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis, class V involved_in ISO
IBA
IEA
UniProtKB:P38211 (PMID:15623507), (PMID:15720390)
PMID:21873635
GO_REF:0000041
RGD
UniProt
PMID:15623507 PMID:15720390 PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 5:145,889,642...145,901,533
Ensembl chr 5:145,889,646...145,901,533
JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis, class W involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr10:69,746,996...69,782,656
Ensembl chr10:69,748,789...69,790,475
JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis, class X involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr11:68,687,126...68,703,067
Ensembl chr11:68,687,093...68,703,472
JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis, class Y acts_upstream_of_or_within ISO (PMID:16162815) RGD PMID:16162815 NCBI chr 8:20,689,621...20,691,863
Ensembl chr 8:20,689,502...20,692,585
JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis, class Z involved_in ISO UniProtKB:Q04174 (PMID:15208306) RGD PMID:15208306 NCBI chr11:68,831,790...68,835,647 JBrowse link
G Znhit3 zinc finger, HIT-type containing 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:69,775,885...69,790,471
Ensembl chr10:69,748,789...69,790,475
JBrowse link
hepoxilin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512 PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512 PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938
JBrowse link
G Alox12e arachidonate 12-lipoxygenase, epidermal involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:55,034,392...55,041,857
Ensembl chr10:55,034,392...55,041,928
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in IDA
IBA
PMID:21873635
PMID:23382512
RGD
GO_Central
UniProt
PMID:15123652 PMID:21873635 PMID:23382512 RGD:5509794, RGD:13792537, RGD:8554649 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512 PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 involved_in ISO
IDA
IBA
(PMID:12881489), (PMID:17045234)
(MGI:3694035|PMID:17045234), (MGI:5488571|PMID:22832496)
PMID:23382512
PMID:21873635
RGD PMID:12881489 PMID:17045234 PMID:22832496 PMID:23382512 PMID:21873635 MGI:3694035 MGI:5488571, RGD:8554649, RGD:13792537 NCBI chr10:53,830,219...53,854,328
Ensembl chr10:53,831,264...53,854,328
JBrowse link
G Gstm1 glutathione S-transferase mu 1 involved_in ISO
ISS
(PMID:21046276)
GO_REF:0000024
RGD
UniProt
PMID:21046276 GO_REF:0000024 NCBI chr 2:195,649,845...195,655,402
Ensembl chr 2:195,649,845...195,655,411
JBrowse link
G Gstm2 glutathione S-transferase mu 2 involved_in ISO
ISS
(PMID:21046276)
GO_REF:0000024
RGD
UniProt
PMID:21046276 GO_REF:0000024 NCBI chr 2:195,624,015...195,628,774
Ensembl chr 2:195,544,426...195,628,961
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO
ISS
(PMID:21046276)
GO_REF:0000024
RGD
UniProt
PMID:21046276 GO_REF:0000024 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226
JBrowse link
isopentenyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:61,629,592...61,637,357
Ensembl chr17:61,629,594...61,637,357
JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:61,504,294...61,507,015
Ensembl chr17:61,504,535...61,507,015
JBrowse link
G LOC103694120 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:61,420,357...61,423,924 JBrowse link
G RGD1564347 similar to isopentenyl diphosphate delta-isomerase type 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:61,372,853...61,386,459
Ensembl chr17:61,373,678...61,386,454
JBrowse link
G RGD1564999 similar to isopentenyl-diphosphate delta isomerase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:61,518,138...61,535,484
Ensembl chr17:61,519,390...61,531,603
JBrowse link
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:197206 PMID:21873635 RGD:2316852, RGD:13792537 NCBI chr19:50,496,366...50,506,389
Ensembl chr19:50,496,367...50,507,971
JBrowse link
G Mvk mevalonate kinase involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt
RGD
PMID:197206 PMID:21873635 GO_REF:0000041, RGD:2316852, RGD:13792537 NCBI chr12:42,141,391...42,158,858
Ensembl chr12:42,141,384...42,158,882
JBrowse link
G Pmvk phosphomevalonate kinase involved_in IDA
IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt
RGD
PMID:197206 PMID:21873635 GO_REF:0000041, RGD:2316852, RGD:13792537 NCBI chr 2:174,876,586...174,886,365
Ensembl chr 2:174,876,657...174,886,364
JBrowse link
isoprenoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coq2 coenzyme Q2, polyprenyltransferase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:8,941,429...8,961,418
Ensembl chr14:8,941,461...8,960,891
JBrowse link
G Crppa CDP-L-ribitol pyrophosphorylase A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:53,120,264...53,397,030
Ensembl chr 6:53,121,438...53,397,028
JBrowse link
G Fdft1 farnesyl diphosphate farnesyl transferase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:37,412,143...37,440,198
Ensembl chr15:37,412,146...37,440,287
JBrowse link
G Fdps farnesyl diphosphate synthase involved_in IEA GO_REF:0000043
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776
JBrowse link
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA
IBA
GO_REF:0000043
PMID:21873635
UniProt PMID:21873635 GO_REF:0000043, RGD:13792537 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703
JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IEA
ISO
GO_REF:0000043
(PMID:8806705)
UniProt
RGD
PMID:8806705 GO_REF:0000043 NCBI chr17:61,629,592...61,637,357
Ensembl chr17:61,629,594...61,637,357
JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 involved_in ISO (PMID:17202134) RGD PMID:17202134 NCBI chr17:61,331,669...61,334,285
Ensembl chr17:61,331,669...61,334,285
JBrowse link
G Mvd mevalonate diphosphate decarboxylase involved_in ISO (PMID:11792727), (PMID:14680974) RGD PMID:11792727 PMID:14680974 NCBI chr19:50,496,366...50,506,389
Ensembl chr19:50,496,367...50,507,971
JBrowse link
G Mvk mevalonate kinase involved_in IDA
ISO
(PMID:14680974), (PMID:14730012) RGD PMID:14680974 PMID:14730012 PMID:7904598 RGD:2316851 NCBI chr12:42,141,391...42,158,858
Ensembl chr12:42,141,384...42,158,882
JBrowse link
G Pdss1 decaprenyl diphosphate synthase subunit 1 involved_in ISO
IBA
(PMID:16262699)
PMID:21873635
(MGI:3607849|PMID:16262699)
RGD PMID:16262699 PMID:21873635 MGI:3607849, RGD:13792537 NCBI chr17:85,059,953...85,098,739
Ensembl chr17:85,060,106...85,098,730
JBrowse link
G Pdss2 decaprenyl diphosphate synthase subunit 2 involved_in ISO
IBA
(PMID:16262699)
(MGI:3607849|PMID:16262699)
PMID:21873635
RGD PMID:16262699 PMID:21873635 MGI:3607849, RGD:13792537 NCBI chr20:46,709,631...46,938,704
Ensembl chr20:46,709,649...46,938,708
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 NOT|acts_upstream_of_or_within ISO MGI:2154454 (MGI:2136720|PMID:11420171) RGD PMID:11420171 MGI:2136720 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Rusc1 RUN and SH3 domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:174,487,921...174,497,266
Ensembl chr 2:174,486,665...174,507,776
JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt4 beta-1,4-galactosyltransferase 4 involved_in ISO
ISS
(PMID:9792633)
GO_REF:0000024
RGD
UniProt
PMID:9792633 GO_REF:0000024 NCBI chr11:61,995,807...62,021,751
Ensembl chr11:61,995,814...62,021,671
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (PMID:10320813) RGD PMID:10320813 NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247
JBrowse link
leukotriene A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6392995|PMID:31642348)
GO_REF:0000107
(PMID:24282679), (PMID:31664810)
UniProt
RGD
Ensembl
PMID:24282679 PMID:31642348 PMID:31664810 GO_REF:0000024 GO_REF:0000107 MGI:6392995 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
lipoate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lias lipoic acid synthetase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
UniProtKB:P60716 (MGI:2135807|PMID:11389890)
RGD PMID:11389890 PMID:21873635 MGI:2135807, RGD:13792537 NCBI chr14:42,876,699...42,893,824
Ensembl chr14:42,876,699...42,893,783
JBrowse link
lipoxin A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISS
ISO
GO_REF:0000024
(PMID:8250832)
UniProt
RGD
PMID:8250832 GO_REF:0000024 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in ISS
ISO
GO_REF:0000024
(MGI:3579746|PMID:15708862)
UniProt
RGD
PMID:15708862 GO_REF:0000024 MGI:3579746 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:27145229)
Ensembl
UniProt
RGD
PMID:27145229 GO_REF:0000024 GO_REF:0000107 NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
JBrowse link
lipoxin B4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISS
ISO
GO_REF:0000024
(PMID:8250832)
UniProt
RGD
PMID:8250832 GO_REF:0000024 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsbg1 acyl-CoA synthetase bubblegum family member 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11381125 PMID:21873635 RGD:68727, RGD:13792537 NCBI chr 8:54,991,294...55,047,276
Ensembl chr 8:54,991,296...55,047,391
JBrowse link
G Acsbg2 acyl-CoA synthetase bubblegum family member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:1,683,846...1,715,517
Ensembl chr 9:1,683,847...1,714,518
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO
ISS
(PMID:20937905)
GO_REF:0000024
RGD
UniProt
PMID:20937905 GO_REF:0000024 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Fads1 fatty acid desaturase 1 acts_upstream_of_or_within ISO (PMID:10601301) RGD PMID:10601301 NCBI chr 1:206,827,724...206,842,734
Ensembl chr 1:206,827,765...206,842,734
JBrowse link
G Gstm4 glutathione S-transferase mu 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:27791009)
UniProt
RGD
PMID:27791009 GO_REF:0000024 NCBI chr 2:195,667,940...195,685,315
Ensembl chr 2:195,680,004...195,685,323
JBrowse link
G LOC316124 similar to gonadotropin-regulated long chain acyl-CoA synthetase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:1,699,337...1,727,637
Ensembl chr 9:1,704,674...1,727,634
JBrowse link
G Ltc4s leukotriene C4 synthase involved_in ISO
ISS
(PMID:27791009)
GO_REF:0000024
RGD
UniProt
PMID:27791009 GO_REF:0000024 NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651
JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO MGI:1856005 (MGI:3619818|PMID:1150661) RGD PMID:1150661 MGI:3619818 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO MGI:1856065 (MGI:3619818|PMID:1150661) RGD PMID:1150661 MGI:3619818 NCBI chr  X:100,184,039...100,201,035
Ensembl chr  X:100,185,767...100,201,032
JBrowse link
G Qki QKI, KH domain containing RNA binding acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1856539 (MGI:3619818|PMID:1150661)
GO_REF:0000107
RGD
Ensembl
PMID:1150661 GO_REF:0000107 MGI:3619818 NCBI chr 1:50,387,698...50,501,568
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
medium-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd1 abhydrolase domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:25,422,526...25,427,514
Ensembl chr 6:25,422,526...25,427,514
JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:133,217,403...133,298,564
Ensembl chr 1:133,217,375...133,299,061
JBrowse link
G Abhd3 abhydrolase domain containing 3, phospholipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:1,723,203...1,778,488
Ensembl chr18:1,720,718...1,803,428
JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) RGD PMID:10578051 NCBI chr 5:162,686,562...162,779,309
Ensembl chr 5:162,684,645...162,779,309
JBrowse link
G Olah oleoyl-ACP hydrolase involved_in ISO
IDA
(PMID:26663084)
PMID:8446599
RGD PMID:26663084 PMID:8446599 RGD:13524614 NCBI chr17:74,877,651...74,902,517
Ensembl chr17:74,877,655...74,902,518
JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in ISO (PMID:15668256) RGD PMID:15668256 NCBI chr15:9,210,443...9,215,852
Ensembl chr15:9,210,547...9,214,558
JBrowse link
mineralocorticoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp21a1 cytochrome P450, family 21, subfamily a, polypeptide 1 IDA 11-deoxycorticosterone RGD PMID:19665544 RGD:4891164 NCBI chr20:4,020,217...4,026,923
Ensembl chr20:4,023,767...4,026,923
JBrowse link
monoacylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Awat2 acyl-CoA wax alcohol acyltransferase 2 involved_in ISO (PMID:28420705) RGD PMID:28420705 NCBI chr  X:65,482,240...65,490,500
Ensembl chr  X:65,481,929...65,527,625
JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5906070|PMID:28420705)
(PMID:28420705)
UniProt
RGD
PMID:28420705 GO_REF:0000024 MGI:5906070 NCBI chr 7:108,223,860...108,235,413
Ensembl chr 7:108,218,524...108,234,299
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in ISO
ISS
(PMID:28420705)
GO_REF:0000024
RGD
UniProt
PMID:28420705 GO_REF:0000024 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428
JBrowse link
G Dgat2l6 diacylglycerol O-acyltransferase 2-like 6 involved_in ISO (PMID:28420705) RGD PMID:28420705 NCBI chr  X:65,614,430...65,637,962
Ensembl chr  X:65,614,430...65,637,962
JBrowse link
G Mogat2 monoacylglycerol O-acyltransferase 2 involved_in ISO (PMID:28420705) RGD PMID:28420705 NCBI chr 1:153,521,813...153,545,756
Ensembl chr 1:153,521,815...153,545,756
JBrowse link
G Mogat3 monoacylglycerol O-acyltransferase 3 involved_in ISO (PMID:28420705) RGD PMID:28420705 NCBI chr12:19,668,703...19,669,420
Ensembl chr12:19,668,788...19,670,754
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in ISO
ISS
(PMID:7794891)
GO_REF:0000024
RGD
UniProt
PMID:7794891 GO_REF:0000024 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
monounsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC681458 similar to stearoyl-coenzyme A desaturase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:243,093,057...243,114,451
Ensembl chr 1:243,078,774...243,114,229
JBrowse link
G Scd stearoyl-CoA desaturase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:1889921|PMID:10899171), (MGI:5646337|PMID:26098370)
SGD:S000003023 (MGI:3623168|PMID:16443825)
RGD PMID:10899171 PMID:16443825 PMID:26098370 PMID:21873635 MGI:1889921 MGI:3623168 MGI:5646337, RGD:13792537 NCBI chr 1:243,269,745...243,282,878
Ensembl chr 1:243,269,747...243,282,562
JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(MGI:3623168|PMID:16443825)
PMID:21873635
Ensembl
RGD
PMID:16443825 PMID:21873635 GO_REF:0000107 MGI:3623168, RGD:13792537 NCBI chr 1:243,169,171...243,182,231
Ensembl chr 1:243,169,236...243,182,232
JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2673743|PMID:12815040)
(MGI:3623168|PMID:16443825)
RGD PMID:12815040 PMID:16443825 PMID:21873635 MGI:2673743 MGI:3623168, RGD:13792537 NCBI chr 1:243,203,433...243,216,007
Ensembl chr 1:243,203,881...243,215,148
JBrowse link
negative regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:19584291)
Ensembl
RGD
PMID:19584291 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) RGD PMID:19584291 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) RGD PMID:16981135 NCBI chr 1:166,237,969...166,281,271
Ensembl chr 1:166,238,238...166,280,590
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IEA
IMP
(PMID:19342457)
GO_REF:0000107
RGD
Ensembl
PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
negative regulation of androgen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 involved_in ISO
IEA
(PMID:16959810)
GO_REF:0000107
RGD
Ensembl
PMID:16959810 GO_REF:0000107 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
negative regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf19 fibroblast growth factor 19 involved_in
acts_upstream_of_or_within
ISO (PMID:12815072)
MGI:1928271 (MGI:5501367|PMID:23747249)
RGD PMID:12815072 PMID:23747249 MGI:5501367 NCBI chr 1:200,056,656...200,059,944
Ensembl chr 1:200,056,644...200,060,287
JBrowse link
G Malrd1 MAM and LDL receptor class A domain containing 1 acts_upstream_of_or_within ISO MGI:1096383|MGI:2154956 (MGI:5501367|PMID:23747249) RGD PMID:23747249 MGI:5501367 NCBI chr17:78,418,819...79,131,016
Ensembl chr17:78,418,819...79,131,016
JBrowse link
G Mir33 microRNA 33 involved_in ISO (PMID:23536474) RGD PMID:23536474 NCBI chr 7:113,713,855...113,713,923
Ensembl chr 7:113,713,855...113,713,923
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:16488887) RGD PMID:16488887 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO
IEA
(PMID:16549446)
GO_REF:0000107
RGD
Ensembl
PMID:16549446 GO_REF:0000107 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in ISO (PMID:15947108) RGD PMID:15947108 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:15243130) RGD PMID:15243130 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404
JBrowse link
negative regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25691431)
RGD PMID:25691431 PMID:21873635 RGD:13792537 NCBI chr 9:48,243,365...48,253,316
Ensembl chr 9:48,237,572...48,253,211
JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25691431)
RGD PMID:25691431 PMID:21873635 RGD:13792537 NCBI chr 7:1,247,869...1,250,999
Ensembl chr 7:1,246,479...1,250,907
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:25691431)
(MGI:5638294|PMID:25691431)
Ensembl
RGD
PMID:25691431 PMID:21873635 GO_REF:0000107 MGI:5638294, RGD:13792537 NCBI chr10:83,590,052...83,598,620
Ensembl chr10:83,590,071...83,598,620
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:6294167|PMID:16118219)
(PMID:16118219)
UniProt
Ensembl
RGD
PMID:16118219 GO_REF:0000024 GO_REF:0000107 MGI:6294167 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240
JBrowse link
negative regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in IDA
ISO
IEA
(PMID:1917954)
GO_REF:0000107
RGD
Ensembl
PMID:1917954 PMID:9225228 GO_REF:0000107, RGD:10059686 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr 1:242,921,147...242,956,472
Ensembl chr 1:242,921,152...242,956,394
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr16:65,017,654...65,034,184
Ensembl chr16:65,018,532...65,033,671
JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 acts_upstream_of_or_within ISO (MGI:5490819|PMID:17202134) RGD PMID:17202134 MGI:5490819 NCBI chr17:61,331,669...61,334,285
Ensembl chr17:61,331,669...61,334,285
JBrowse link
G Mir185 microRNA 185 acts_upstream_of ISO RNAcentral:URS00002367FA_9606|RNAcentral:URS00004176D4_9606 (PMID:24296663) RGD PMID:24296663 NCBI chr11:82,664,716...82,664,795
Ensembl chr11:82,664,716...82,664,795
JBrowse link
G Sod1 superoxide dismutase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:15473258)
UniProt
RGD
PMID:15473258 GO_REF:0000024 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
negative regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO
IEA
(PMID:19584291)
GO_REF:0000107
RGD
Ensembl
PMID:19584291 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) RGD PMID:19584291 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) RGD PMID:16981135 NCBI chr 1:166,237,969...166,281,271
Ensembl chr 1:166,238,238...166,280,590
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IEA
IMP
(PMID:19342457)
GO_REF:0000107
RGD
Ensembl
PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
negative regulation of estrogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prl prolactin involved_in ISO (PMID:24530842) RGD PMID:24530842 NCBI chr17:37,859,999...37,870,062
Ensembl chr17:37,860,007...37,870,062
JBrowse link
negative regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in ISO (MGI:3526480|PMID:15639194) RGD PMID:15639194 MGI:3526480 NCBI chr 9:68,333,981...68,372,149
Ensembl chr 9:68,333,980...68,372,220
JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain involved_in IEA
ISO
GO_REF:0000107
(MGI:3526480|PMID:15639194)
Ensembl
RGD
PMID:15639194 GO_REF:0000107 MGI:3526480 NCBI chr10:54,732,875...54,738,102
Ensembl chr10:54,732,469...54,738,075
JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:15576844) RGD PMID:15576844 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375
JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO (PMID:11060345), (PMID:18635818) RGD PMID:11060345 PMID:18635818 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583
JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA
ISS
IBA
(PMID:16326698)
GO_REF:0000107
GO_REF:0000024
PMID:21873635
RGD
Ensembl
UniProt
PMID:16326698 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in IMP PMID:16054098 UniProt PMID:16054098 RGD:11059593 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in IDA PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688
JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr 1:242,921,147...242,956,472
Ensembl chr 1:242,921,152...242,956,394
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr16:65,017,654...65,034,184
Ensembl chr16:65,018,532...65,033,671
JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (MGI:3603108|PMID:16100574) RGD PMID:16100574 MGI:3603108 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952
JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO MGI:1916289 (MGI:3603108|PMID:16100574) RGD PMID:16100574 MGI:3603108 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923
JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
JBrowse link
G Trib3 tribbles pseudokinase 3 involved_in ISO (MGI:3630230|PMID:16794074) RGD PMID:16794074 MGI:3630230 NCBI chr 3:140,809,634...140,815,230
Ensembl chr 3:140,809,043...140,814,497
JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3770497|PMID:17767906)
RGD PMID:17767906 PMID:21873635 MGI:3770497, RGD:13792537 NCBI chr 5:145,491,461...145,559,631
Ensembl chr 5:145,491,466...145,540,408
JBrowse link
negative regulation of glucocorticoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 acts_upstream_of_or_within ISO MGI:2451290 (MGI:3696486|PMID:17234593) RGD PMID:17234593 MGI:3696486 NCBI chr 2:189,020,722...189,048,826
Ensembl chr 2:189,020,722...189,048,837
JBrowse link
negative regulation of lipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:12042316) RGD PMID:12042316 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Asxl3 ASXL transcriptional regulator 3 involved_in ISO (PMID:25450400) RGD PMID:25450400 NCBI chr18:13,593,529...13,766,324
Ensembl chr18:13,593,985...13,762,427
JBrowse link
G Ccdc3 coiled-coil domain containing 3 acts_upstream_of_or_within ISO (MGI:6108413|PMID:28827783) RGD PMID:28827783 MGI:6108413 NCBI chr17:73,031,891...73,135,173
Ensembl chr17:73,035,045...73,135,337
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3819735|PMID:18544705)
UniProt
RGD
PMID:18544705 GO_REF:0000024 MGI:3819735 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5516154|PMID:23871778)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23871778 GO_REF:0000024 GO_REF:0000107 MGI:5516154 NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
JBrowse link
G LOC259246 alpha-2u globulin PGCL1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 Ensembl chr 5:75,142,157...75,564,845 JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of ISO (PMID:25592151) RGD PMID:25592151 NCBI chr 1:133,440,049...133,440,138 JBrowse link
G Obp2a odorant binding protein 2A acts_upstream_of_or_within ISO (MGI:5297637|PMID:21908604) RGD PMID:21908604 MGI:5297637 NCBI chr 3:8,505,990...8,509,269
Ensembl chr 3:8,505,990...8,509,269
JBrowse link
G Serpina12 serpin family A member 12 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5563627|PMID:22837305)
Ensembl
RGD
PMID:22837305 GO_REF:0000107 MGI:5563627 NCBI chr 6:122,952,552...122,967,271
Ensembl chr 6:122,952,552...122,967,271
JBrowse link
G Stk11 serine/threonine kinase 11 acts_upstream_of_or_within ISO MGI:5578333 (MGI:5562992|PMID:24295069) RGD PMID:24295069 MGI:5562992 NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
JBrowse link
negative regulation of phosphatidate phosphatase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpin1 lipin 1 IMP RGD PMID:21715287 RGD:38599010 NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097
JBrowse link
negative regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of_or_within ISO (MGI:4460850|PMID:20018880) RGD PMID:20018880 MGI:4460850 NCBI chr 1:29,766,070...29,816,401
Ensembl chr 1:29,766,071...29,816,401
JBrowse link
negative regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A involved_in ISS
ISO
GO_REF:0000024
(PMID:2538439)
UniProt
RGD
PMID:2538439 GO_REF:0000024 NCBI chr12:15,645,549...15,667,056
Ensembl chr12:15,645,541...15,666,497
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:2538439)
UniProt
Ensembl
RGD
PMID:2538439 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
negative regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in IMP
IEA
ISO
PMID:24201375
GO_REF:0000107
(PMID:24201375)
Ensembl
RGD
PMID:24201375 PMID:24201375 GO_REF:0000107, RGD:14697729 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IBA
(PMID:19523918)
PMID:21873635
RGD PMID:19523918 PMID:21873635 RGD:13792537 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063
JBrowse link
negative regulation of progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prl prolactin involved_in ISO (PMID:24530842) RGD PMID:24530842 NCBI chr17:37,859,999...37,870,062
Ensembl chr17:37,860,007...37,870,062
JBrowse link
negative regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir204 microRNA 204 involved_in ISO (PMID:29441883) RGD PMID:29441883 NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
JBrowse link
G Pibf1 progesterone immunomodulatory binding factor 1 involved_in ISO (PMID:3863495) RGD PMID:3863495 NCBI chr15:75,850,389...76,019,711
Ensembl chr15:75,850,624...76,019,712
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:5306564|PMID:20042607) RGD PMID:20042607 MGI:5306564 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
negative regulation of retinoic acid biosynthetic process term browser