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ONTOLOGY REPORT - ANNOTATIONS

Term:proteasome regulatory particle, base subcomplex
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Accession:GO:0008540 term browser browse the term
Definition:The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex.


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proteasome regulatory particle, base subcomplex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100687152 26S proteasome regulatory subunit 6A-like part_of IEA TreeGrafter GO_REF:0000118 NCBI chr  X:51,797,241...51,798,636 JBrowse link
G LOC100687259 26S proteasome regulatory subunit 10B part_of IEA TreeGrafter GO_REF:0000118 NCBI chr32:35,814,756...35,816,311 JBrowse link
G LOC119877792 26S proteasome regulatory subunit 10B part_of IEA TreeGrafter GO_REF:0000118
G LOC478703 proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene part_of IEA TreeGrafter GO_REF:0000118 NCBI chr35:4,052,049...4,053,618 JBrowse link
G PSMC1 proteasome 26S subunit, ATPase 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 8:61,272,363...61,285,886
Ensembl chr 8:61,272,363...61,285,886 		JBrowse link
G PSMC2 proteasome 26S subunit, ATPase 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr18:16,845,593...16,859,010
Ensembl chr18:16,845,594...16,858,911 		JBrowse link
G PSMC3 proteasome 26S subunit, ATPase 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr18:42,212,083...42,218,958 JBrowse link
G PSMC4 proteasome 26S subunit, ATPase 4 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 1:113,548,351...113,557,725
Ensembl chr 1:113,548,373...113,557,630 		JBrowse link
G PSMC5 proteasome 26S subunit, ATPase 5 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 9:11,783,422...11,787,624
Ensembl chr 9:11,783,466...11,787,617 		JBrowse link
G PSMC6 proteasome 26S subunit, ATPase 6 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 8:28,914,302...28,947,854 JBrowse link
G PSMD1 proteasome 26S subunit, non-ATPase 1 part_of IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr25:43,003,127...43,096,281
Ensembl chr25:43,003,143...43,096,271 		JBrowse link
G PSMD10 proteasome 26S subunit, non-ATPase 10 part_of
located_in		 IEA
ISO		 (PMID:19490896) Ensembl
UniProt		 PMID:19490896 GO_REF:0000107 NCBI chr  X:81,625,288...81,632,175
Ensembl chr  X:81,625,141...81,632,129 		JBrowse link
G PSMD2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 part_of IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr34:17,180,119...17,189,298
Ensembl chr34:17,180,098...17,189,303 		JBrowse link
G PSMD4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr17:60,306,134...60,313,610
Ensembl chr17:60,306,229...60,313,610 		JBrowse link
G PSMD5 proteasome 26S subunit, non-ATPase 5 located_in ISO (PMID:19412159), (PMID:19490896) UniProt PMID:19412159 PMID:19490896 NCBI chr11:73,858,376...73,876,090 JBrowse link
G PSMD9 proteasome 26S subunit, non-ATPase 9 part_of
located_in		 IEA
ISO		 (PMID:19490896) Ensembl
UniProt		 PMID:19490896 GO_REF:0000107 NCBI chr26:7,376,154...7,400,655
Ensembl chr26:7,377,413...7,400,573 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18914
    protein-containing complex 6538
      proteasome regulatory particle, base subcomplex 16
        cytosolic proteasome regulatory particle, base subcomplex 0
        nuclear proteasome regulatory particle, base subcomplex 0
Path 2
Term Annotations click to browse term
  cellular_component 18914
    protein-containing complex 6538
      catalytic complex 1862
        peptidase complex 138
          endopeptidase complex 101
            proteasome complex 80
              proteasome accessory complex 30
                proteasome regulatory particle 27
                  proteasome regulatory particle, base subcomplex 16
                    cytosolic proteasome regulatory particle, base subcomplex 0
                    nuclear proteasome regulatory particle, base subcomplex 0
paths to the root