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ONTOLOGY REPORT - ANNOTATIONS


Term:intracellular mRNA localization
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Accession:GO:0008298 term browser browse the term
Definition:Any process in which mRNA is transported to, or maintained in, a specific location within the cell.
Synonyms:exact_synonym: establishment and maintenance of intracellular RNA localization;   intracellular mRNA localisation
 narrow_synonym: intracellular mRNA positioning



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intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casc3 CASC3 exon junction complex subunit acts_upstream_of_or_within ISO (MGI:2683131|PMID:12843282) RGD PMID:12843282 MGI:2683131 NCBI chr10:83,769,014...83,788,966
Ensembl chr10:83,769,001...83,788,966
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 acts_upstream_of_or_within ISO (MGI:2683131|PMID:12843282) RGD PMID:12843282 MGI:2683131 NCBI chr 3:155,680,000...155,725,969
Ensembl chr 3:155,680,000...155,725,909
JBrowse link
G Zfp385a zinc finger protein 385A acts_upstream_of_or_within ISO MGI:3510440 (MGI:3610775|PMID:16286649) RGD PMID:16286649 MGI:3610775 NCBI chr 7:134,448,914...134,475,548
Ensembl chr 7:134,448,921...134,475,548
JBrowse link
mRNA localization resulting in posttranscriptional regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104663 (MGI:4943819|PMID:20541607)
Ensembl
RGD
PMID:20541607 GO_REF:0000107 MGI:4943819 NCBI chr 1:229,736,037...229,823,499
Ensembl chr 1:229,736,106...229,824,354
JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO MGI:3051635|MGI:5570192 (MGI:5823498|PMID:28063167) RGD PMID:28063167 MGI:5823498 NCBI chr 3:77,491,195...77,593,300
Ensembl chr 3:77,491,276...77,593,264
JBrowse link
G Zfp385a zinc finger protein 385A involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3510440 (MGI:3610775|PMID:16286649)
RGD PMID:16286649 PMID:21873635 MGI:3610775, RGD:13792537 NCBI chr 7:134,448,914...134,475,548
Ensembl chr 7:134,448,921...134,475,548
JBrowse link
positive regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 involved_in IMP PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
ISS
(PMID:17369404)
GO_REF:0000024
RGD
UniProt
PMID:17369404 GO_REF:0000024 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISO
ISS
(PMID:17369404)
GO_REF:0000024
RGD
UniProt
PMID:17369404 GO_REF:0000024 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
regulation of intracellular mRNA localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B IMP RGD PMID:21471000 RGD:9999187 NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344
JBrowse link
G Htt huntingtin IMP RGD PMID:20185826 RGD:10403027 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link

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