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ONTOLOGY REPORT - ANNOTATIONS

Term:spermidine biosynthetic process
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Accession:GO:0008295 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.
Synonyms:exact_synonym: spermidine anabolism;   spermidine biosynthesis;   spermidine formation;   spermidine synthesis
 xref: MetaCyc:BSUBPOLYAMSYN-PWY;   MetaCyc:POLYAMINSYN3-PWY


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spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 involved_in IDA
IMP
IEA
IBA		 GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central
RGD		 PMID:10430362 PMID:10712236 PMID:1415709 GO_REF:0000033 GO_REF:0000043, RGD:1578320, RGD:7242911, RGD:7242912 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G Srm spermidine synthase involved_in IDA
IMP
ISO
IBA		 (PMID:17585781)
GO_REF:0000033		 RGD
GO_Central		 PMID:17585781 PMID:12843627 PMID:16931179 PMID:8494549 GO_REF:0000033, RGD:1359042, RGD:7242920, RGD:7242928 NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405 		JBrowse link
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase involved_in ISO (PMID:16354669) RGD PMID:16354669 NCBI chr 1:194,919,655...194,928,498
Ensembl chr 1:194,903,273...194,928,504 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    metabolic process 11835
      organic substance metabolic process 11328
        organonitrogen compound metabolic process 5843
          amine metabolic process 134
            biogenic amine metabolic process 110
              polyamine metabolic process 23
                polyamine biosynthetic process 16
                  spermidine biosynthetic process 3
                    negative regulation of spermidine biosynthetic process 0
                    positive regulation of spermidine biosynthetic process 1
                    regulation of spermidine biosynthetic process + 1
paths to the root