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ONTOLOGY REPORT - ANNOTATIONS


Term:cell death
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Accession:GO:0008219 term browser browse the term
Definition:Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538).
Comment:This term should not be used for direct annotation. The only exception should be when experimental data (e.g., staining with trypan blue or propidium iodide) show that cell death has occurred, but fail to provide details on death modality (accidental versus programmed). When information is provided on the cell death mechanism, annotations should be made to the appropriate descendant of 'cell death' (such as, but not limited to, GO:0097300 'programmed necrotic cell death' or GO:0006915 'apoptotic process'). Also, if experimental data suggest that a gene product influences cell death indirectly, rather than being involved in the death process directly, consider annotating to a 'regulation' term.
Synonyms:related_synonym: accidental cell death;   necrosis


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cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 ISO RGD PMID:16802292 RGD:1599082 NCBI chrNW_004955403:22,449...104,577
Ensembl chrNW_004955403:22,449...104,948
JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 ISO RGD PMID:10686355 RGD:2301245 NCBI chrNW_004955580:927,546...934,633
Ensembl chrNW_004955580:927,114...934,734
JBrowse link
G Axin2 axin 2 ISO RGD PMID:15572025 RGD:1599426 NCBI chrNW_004955478:4,952,551...4,982,223
Ensembl chrNW_004955478:4,952,488...4,982,225
JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (PMID:10400625) UniProt PMID:10400625 NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050
JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO PMID:14972662 UniProt PMID:14972662 RGD:2314028 NCBI chrNW_004955477:9,621,812...9,630,406
Ensembl chrNW_004955477:9,621,812...9,638,099
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in ISO (PMID:14712213) UniProt PMID:14712213 NCBI chrNW_004955419:8,529,213...8,704,113
Ensembl chrNW_004955419:8,529,177...8,704,113
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A involved_in ISO (PMID:16595610) UniProt PMID:16595610 NCBI chrNW_004955415:32,182,536...32,457,511
Ensembl chrNW_004955415:32,183,442...32,400,595
JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO RGD PMID:17006629 RGD:2293617 NCBI chrNW_004955413:9,615,542...9,620,542
Ensembl chrNW_004955413:9,615,542...9,620,542
JBrowse link
G Cidea cell death inducing DFFA like effector a ISO (MGI:3768618|PMID:17080483) BHF-UCL PMID:17080483 MGI:3768618 NCBI chrNW_004955402:1,090,372...1,096,621
Ensembl chrNW_004955402:1,090,518...1,096,569
JBrowse link
G Emp1 epithelial membrane protein 1 involved_in ISO (PMID:12107182) UniProt PMID:12107182 NCBI chrNW_004955413:10,062,621...10,081,551
Ensembl chrNW_004955413:10,062,635...10,081,733
JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISO (PMID:12107182) UniProt PMID:12107182 NCBI chrNW_004955442:7,826,967...7,862,035
Ensembl chrNW_004955442:7,826,738...7,860,028
JBrowse link
G Emp3 epithelial membrane protein 3 involved_in ISO (PMID:12107182) UniProt PMID:12107182 NCBI chrNW_004955559:2,117,200...2,121,366
Ensembl chrNW_004955559:2,117,200...2,121,366
JBrowse link
G Faf1 Fas associated factor 1 involved_in ISO (PMID:15743842) UniProt PMID:15743842 NCBI chrNW_004955464:8,037,344...8,477,798
Ensembl chrNW_004955464:8,036,955...8,479,249
JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (PMID:23319600)
(PMID:23361013)
UniProt PMID:23319600 PMID:23361013 NCBI chrNW_004955421:22,535,777...22,579,965
Ensembl chrNW_004955421:22,535,777...22,579,965
JBrowse link
G Gsdme gasdermin E involved_in ISO (PMID:26236191) UniProt PMID:26236191 NCBI chrNW_004955410:26,700,977...26,761,683
Ensembl chrNW_004955410:26,701,893...26,769,989
JBrowse link
G Hmox1 heme oxygenase 1 ISO PMID:17430897 BHF-UCL PMID:17430897 RGD:8553479 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO RGD PMID:16504407 RGD:1624391 NCBI chrNW_004955431:583,165...646,991
Ensembl chrNW_004955431:580,713...647,345
JBrowse link
G Klk8 kallikrein related peptidase 8 ISO (MGI:3766680|PMID:17629414) UniProt PMID:17629414 MGI:3766680 NCBI chrNW_004955558:1,479,383...1,484,209
Ensembl chrNW_004955558:1,479,465...1,484,244
JBrowse link
G Map3k10 mitogen-activated protein kinase kinase kinase 10 ISO RGD PMID:11416147 RGD:2302272 NCBI chrNW_004955578:1,018,280...1,037,553
Ensembl chrNW_004955578:1,018,560...1,036,901
JBrowse link
G Map3k11 mitogen-activated protein kinase kinase kinase 11 ISO RGD PMID:11416147 RGD:2302272 NCBI chrNW_004955422:19,651,371...19,666,468
Ensembl chrNW_004955422:19,651,372...19,667,924
JBrowse link
G Map3k9 mitogen-activated protein kinase kinase kinase 9 ISO RGD PMID:11416147 RGD:2302272 NCBI chrNW_004955523:4,326,315...4,387,390
Ensembl chrNW_004955523:4,326,317...4,385,544
JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 involved_in ISO (PMID:16140270) UniProt PMID:16140270 NCBI chrNW_004955513:5,208,040...5,216,618
Ensembl chrNW_004955513:5,208,151...5,216,182
JBrowse link
G Nup62 nucleoporin 62 involved_in ISO (PMID:11244088) UniProt PMID:11244088 NCBI chrNW_004955559:1,012,919...1,033,465
Ensembl chrNW_004955559:1,030,894...1,032,462
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO (MGI:3664807|PMID:16116196), (MGI:3772554|PMID:18097031)
(MGI:3040567|PMID:14761980)
MGI PMID:14761980 PMID:16116196 PMID:18097031 MGI:3040567 MGI:3664807 MGI:3772554 NCBI chrNW_004955482:7,048,674...7,087,525
Ensembl chrNW_004955482:7,048,776...7,086,926
JBrowse link
G Parp4 poly(ADP-ribose) polymerase family member 4 involved_in ISO (PMID:12140175) UniProt PMID:12140175 NCBI chrNW_004955425:20,957,032...21,047,971 JBrowse link
G Pjvk pejvakin ISO (MGI:5887150|PMID:28209736)
(MGI:5907777|PMID:28089576)
MGI PMID:28089576 PMID:28209736 MGI:5887150 MGI:5907777 NCBI chrNW_004955403:18,386,705...18,393,771
Ensembl chrNW_004955403:18,386,705...18,393,771
JBrowse link
G Pmp22 peripheral myelin protein 22 involved_in ISO (PMID:12107182) UniProt PMID:12107182 NCBI chrNW_004955467:2,422,181...2,456,925
Ensembl chrNW_004955467:2,423,659...2,457,307
JBrowse link
G Pnpla8 patatin like phospholipase domain containing 8 involved_in ISO (PMID:15695510) UniProt PMID:15695510 NCBI chrNW_004955410:12,715,072...12,753,433
Ensembl chrNW_004955410:12,711,082...12,753,433
JBrowse link
G Prkd2 protein kinase D2 involved_in ISO (PMID:17077180) BHF-UCL PMID:17077180 NCBI chrNW_004955574:723,933...750,794
Ensembl chrNW_004955574:723,933...750,793
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in ISO (MGI:6305600|PMID:30988283)
(PMID:30988283)
UniProt PMID:30988283 MGI:6305600 NCBI chrNW_004955465:10,127,907...10,167,895
Ensembl chrNW_004955465:10,128,931...10,168,399
JBrowse link
G Rraga Ras related GTP binding A involved_in ISO (PMID:8995684), (PMID:9394008) UniProt PMID:8995684 PMID:9394008 NCBI chrNW_004955434:21,509,528...21,510,885
Ensembl chrNW_004955434:21,509,529...21,510,470
JBrowse link
G Sncaip synuclein alpha interacting protein involved_in ISO (PMID:16595633) CACAO PMID:16595633 NCBI chrNW_004955521:410,270...548,691
Ensembl chrNW_004955521:482,433...548,751
JBrowse link
G Susd6 sushi domain containing 6 involved_in ISO (PMID:24652652) UniProt PMID:24652652 NCBI chrNW_004955466:681,701...734,797
Ensembl chrNW_004955466:681,701...735,800
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (PMID:16227582) UniProt PMID:16227582 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
JBrowse link
G Vapa VAMP associated protein A involved_in ISO PMID:19289470
(PMID:19289470)
UniProt PMID:19289470 RGD:8554038 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
activation-induced cell death of T cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:14749367) MGI PMID:14749367 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ISO (MGI:3580938|PMID:15879105) MGI PMID:15879105 MGI:3580938 NCBI chrNW_004955442:12,971,031...13,002,605
Ensembl chrNW_004955442:12,967,438...13,010,943
JBrowse link
G Fas Fas cell surface death receptor ISO (MGI:79355|PMID:8640868)
(MGI:2670301|PMID:12702495)
(MGI:73864|PMID:7602121)
MGI PMID:7602121 PMID:8640868 PMID:12702495 MGI:2670301 MGI:73864 MGI:79355 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Il2ra interleukin 2 receptor subunit alpha ISO (MGI:1889048|PMID:7584142) MGI PMID:7584142 MGI:1889048 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913
JBrowse link
G Rps6 ribosomal protein S6 ISO (MGI:3610868|PMID:16357222) MGI PMID:16357222 MGI:3610868 NCBI chrNW_004955434:21,744,045...21,745,646
Ensembl chrNW_004955434:21,744,082...21,746,626
JBrowse link
G Siva1 SIVA1 apoptosis inducing factor involved_in ISO (PMID:16491128) HGNC-UCL PMID:16491128 NCBI chrNW_004955538:3,197,983...3,202,782 JBrowse link
anoikis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmf Bcl2 modifying factor involved_in ISO (PMID:11546872) MGI PMID:11546872 NCBI chrNW_004955416:7,048,654...7,068,917
Ensembl chrNW_004955416:7,052,290...7,068,910
JBrowse link
G Dapk2 death associated protein kinase 2 involved_in ISO (PMID:18957423) UniProt PMID:18957423 NCBI chrNW_004955450:11,348,566...11,443,908
Ensembl chrNW_004955450:11,348,566...11,455,582
JBrowse link
G E2f1 E2F transcription factor 1 ISO (MGI:3028362|PMID:14667810) MGI PMID:14667810 MGI:3028362 NCBI chrNW_004955422:27,638,625...27,643,261
Ensembl chrNW_004955422:27,633,827...27,642,241
JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma ISO (MGI:5819337|PMID:23778976) ParkinsonsUK-UCL PMID:23778976 MGI:5819337 NCBI chrNW_004955580:1,053,823...1,069,802
Ensembl chrNW_004955580:1,053,823...1,069,802
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO (MGI:5819337|PMID:23778976) ParkinsonsUK-UCL PMID:23778976 MGI:5819337 NCBI chrNW_004955411:17,177,335...17,229,957
Ensembl chrNW_004955411:17,177,335...17,229,957
JBrowse link
G Sik1 salt inducible kinase 1 ISO (MGI:4887544|PMID:19622832) BHF-UCL PMID:19622832 MGI:4887544 NCBI chrNW_004955407:38,739,062...38,749,293 JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (PMID:19622832) BHF-UCL PMID:19622832 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058
JBrowse link
G Tfdp1 transcription factor Dp-1 ISO (MGI:3028362|PMID:14667810) MGI PMID:14667810 MGI:3028362 NCBI chrNW_004955404:371,905...408,441
Ensembl chrNW_004955404:368,793...408,930
JBrowse link
G Tsc2 TSC complex subunit 2 involved_in ISO (MGI:5819337|PMID:23778976)
(PMID:23778976)
ParkinsonsUK-UCL PMID:23778976 MGI:5819337 NCBI chrNW_004955442:15,178,356...15,216,978
Ensembl chrNW_004955442:15,178,487...15,216,362
JBrowse link
apoptotic chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 involved_in ISO (PMID:10490026) UniProt PMID:10490026 NCBI chrNW_004955409:37,206,675...37,246,851
Ensembl chrNW_004955409:37,206,675...37,246,922
JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO (PMID:10959840) UniProt PMID:10959840 NCBI chrNW_004955486:7,836,013...7,849,875
Ensembl chrNW_004955486:7,838,273...7,850,180
JBrowse link
G Ern2 endoplasmic reticulum to nucleus signaling 2 involved_in ISO (PMID:11175748) UniProt PMID:11175748 NCBI chrNW_004955493:2,217,187...2,233,920
Ensembl chrNW_004955493:2,217,384...2,233,920
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO PMID:23907461 UniProt PMID:23907461 RGD:8553942 NCBI chrNW_004955460:8,790,798...8,794,902
Ensembl chrNW_004955460:8,790,798...8,794,902
JBrowse link
G Top2a DNA topoisomerase II alpha involved_in ISO (PMID:10959840) UniProt PMID:10959840 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffb DNA fragmentation factor subunit beta involved_in ISO (PMID:15572351), (PMID:22253444) RGD
CAFA
PMID:11425895 PMID:15572351 PMID:22253444 RGD:628524 NCBI chrNW_004955486:7,836,013...7,849,875
Ensembl chrNW_004955486:7,838,273...7,850,180
JBrowse link
G Dnase1l3 deoxyribonuclease 1 like 3 involved_in ISO (MGI:2385551|PMID:12050166)
(PMID:23229555)
MGI
UniProt
PMID:12050166 PMID:23229555 MGI:2385551 NCBI chrNW_004955430:7,867,172...7,892,079
Ensembl chrNW_004955430:7,867,109...7,892,079
JBrowse link
G Endog endonuclease G ISO (MGI:3029597|PMID:14663139) MGI PMID:14663139 MGI:3029597 NCBI chrNW_004955570:1,200,461...1,203,566
Ensembl chrNW_004955570:1,200,996...1,203,566
JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:16153597) UniProt PMID:16153597 NCBI chrNW_004955501:83,965...84,476 JBrowse link
apoptotic mitochondrial changes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm2 apoptosis inducing factor mitochondria associated 2 involved_in ISO (PMID:11980907) MGI PMID:11980907 NCBI chrNW_004955437:21,111,298...21,126,487
Ensembl chrNW_004955437:21,110,798...21,126,482
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO (MGI:2669068|PMID:12869584) MGI PMID:12869584 MGI:2669068 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member ISO RGD PMID:30131474 RGD:15036798 NCBI chrNW_004955482:8,352,569...8,383,097 JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISO (PMID:19061639) BHF-UCL PMID:19061639 NCBI chrNW_004955493:6,559,995...6,578,461
Ensembl chrNW_004955493:6,559,995...6,578,461
JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (MGI:2677915|PMID:12925707)
(PMID:9843949)
MGI
HGNC-UCL
PMID:9843949 PMID:12925707 MGI:2677915 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:2686748|PMID:14707049) MGI PMID:14707049 MGI:2686748 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Bid BH3 interacting domain death agonist ISO (MGI:1277505|PMID:9727492) MGI PMID:9727492 MGI:1277505 NCBI chrNW_004955454:5,776,656...5,785,500 JBrowse link
G Bik BCL2 interacting killer ISO (MGI:1202139|PMID:9525867) MGI PMID:9525867 MGI:1202139 NCBI chrNW_004955413:28,277,727...28,294,032 JBrowse link
G Cd24 CD24 molecule ISO (MGI:2686748|PMID:14707049) MGI PMID:14707049 MGI:2686748 NCBI chrNW_004955411:32,270,881...32,275,236 JBrowse link
G Dap3 death associated protein 3 ISO (MGI:1926997|PMID:11017876) MGI PMID:11017876 MGI:1926997 NCBI chrNW_004955545:1,951,008...1,981,174
Ensembl chrNW_004955545:1,951,150...1,980,861
JBrowse link
G Gclm glutamate-cysteine ligase modifier subunit ISO (MGI:3047441|PMID:15288121) MGI PMID:15288121 MGI:3047441 NCBI chrNW_004955423:782,468...805,384
Ensembl chrNW_004955423:782,468...805,384
JBrowse link
G Hk2 hexokinase 2 involved_in ISO (MGI:3777889|PMID:18350175)
(PMID:18350175)
MGI PMID:18350175 MGI:3777889 NCBI chrNW_004955424:10,897,528...10,966,025
Ensembl chrNW_004955424:10,897,485...10,966,025
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 ISO RGD PMID:21854881 RGD:10402841 NCBI chrNW_004955403:3,062,724...3,073,419
Ensembl chrNW_004955403:3,063,133...3,073,419
JBrowse link
G Jtb jumping translocation breakpoint ISO (MGI:5009395|PMID:17369841) MGI PMID:17369841 MGI:5009395 NCBI chrNW_004955545:569,473...571,725 JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO (MGI:3577836|PMID:15882989) MGI PMID:15882989 MGI:3577836 NCBI chrNW_004955446:11,022,091...11,090,136
Ensembl chrNW_004955446:11,021,971...11,090,136
JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member ISO (MGI:4421270|PMID:19919825) MGI PMID:19919825 MGI:4421270 NCBI chrNW_004955413:238,043...243,317 JBrowse link
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in ISO (PMID:15186778) UniProt PMID:15186778 NCBI chrNW_004955457:8,838,216...8,879,059
Ensembl chrNW_004955457:8,838,216...8,883,481
JBrowse link
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase ISO (MGI:2669068|PMID:12869584) MGI PMID:12869584 MGI:2669068 NCBI chrNW_004955543:444,314...449,201
Ensembl chrNW_004955543:444,314...449,201
JBrowse link
G Ppif peptidylprolyl isomerase F ISO (MGI:3777889|PMID:18350175) MGI PMID:18350175 MGI:3777889 NCBI chrNW_004955437:13,295,766...13,301,918
Ensembl chrNW_004955437:13,295,663...13,302,175
JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta ISO (MGI:3694309|PMID:16717086) MGI PMID:16717086 MGI:3694309 NCBI chrNW_004955463:7,229,717...7,249,490
Ensembl chrNW_004955463:7,226,912...7,249,490
JBrowse link
G Rnf7 ring finger protein 7 ISO (MGI:1333612|PMID:10082581) MGI PMID:10082581 MGI:1333612 NCBI chrNW_004955508:4,001,441...4,003,518 JBrowse link
G Slc25a4 solute carrier family 25 member 4 ISO (MGI:3777889|PMID:18350175) MGI PMID:18350175 MGI:3777889 NCBI chrNW_004955403:23,878,329...23,882,322
Ensembl chrNW_004955403:23,878,329...23,882,322
JBrowse link
G Sod2 superoxide dismutase 2 ISO (MGI:1931647|PMID:11226230) MGI PMID:11226230 MGI:1931647 NCBI chrNW_004955439:21,209,101...21,223,538
Ensembl chrNW_004955439:21,209,101...21,224,163
JBrowse link
apoptotic nuclear changes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C involved_in ISO (PMID:15531507) UniProt PMID:15531507 NCBI chrNW_004955449:15,814,230...15,864,747
Ensembl chrNW_004955449:15,813,856...15,858,537
JBrowse link
G Blcap BLCAP apoptosis inducing factor involved_in ISO (PMID:17031575) UniProt PMID:17031575 NCBI chrNW_004955445:19,116,945...19,127,469
Ensembl chrNW_004955445:19,117,226...19,127,469
JBrowse link
G Cd24 CD24 molecule ISO (MGI:2686748|PMID:14707049) MGI PMID:14707049 MGI:2686748 NCBI chrNW_004955411:32,270,881...32,275,236 JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO (PMID:23478299) UniProt PMID:23478299 NCBI chrNW_004955451:13,160,811...13,170,012
Ensembl chrNW_004955451:13,120,761...13,170,073
JBrowse link
G Dedd2 death effector domain containing 2 involved_in ISO (PMID:11741985) UniProt PMID:11741985 NCBI chrNW_004955555:684,523...701,915
Ensembl chrNW_004955555:684,523...701,915
JBrowse link
G Sharpin SHANK associated RH domain interactor ISO (MGI:75289|PMID:7792947) MGI PMID:7792947 MGI:75289 NCBI chrNW_004955454:2,761,725...2,765,929
Ensembl chrNW_004955454:2,761,725...2,765,929
JBrowse link
apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatk apoptosis associated tyrosine kinase ISO (MGI:1195444|PMID:9444961) MGI PMID:9444961 MGI:1195444 NCBI chrNW_004955506:1,828,326...1,868,302
Ensembl chrNW_004955506:1,828,326...1,866,636
JBrowse link
G Adam15 ADAM metallopeptidase domain 15 NOT|involved_in ISO (PMID:22505472) UniProt PMID:22505472 NCBI chrNW_004955545:1,545,532...1,555,826
Ensembl chrNW_004955545:1,545,635...1,555,614
JBrowse link
G Adrb1 adrenoceptor beta 1 ISO RGD PMID:16820859 RGD:5129152 NCBI chrNW_004955431:19,025,663...19,027,026 JBrowse link
G Ahcyl1 adenosylhomocysteinase like 1 involved_in ISO (PMID:27995898) UniProt PMID:27995898 NCBI chrNW_004955435:13,487,441...13,525,924
Ensembl chrNW_004955435:13,487,398...13,526,189
JBrowse link
G Aifm1 apoptosis inducing factor mitochondria associated 1 involved_in ISO (PMID:23217327) UniProt PMID:23217327 NCBI chrNW_004955473:4,891,955...4,925,705
Ensembl chrNW_004955473:4,891,955...4,926,428
JBrowse link
G Akap1 A-kinase anchoring protein 1 ISO (MGI:6432573|PMID:32072193) UniProt PMID:32072193 MGI:6432573 NCBI chrNW_004955451:5,756,648...5,787,617
Ensembl chrNW_004955451:5,756,835...5,770,238
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO RGD PMID:16440211 RGD:39128200 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Aldoc aldolase, fructose-bisphosphate C ISO RGD PMID:16356555 RGD:2301134 NCBI chrNW_004955481:4,576,913...4,580,999
Ensembl chrNW_004955481:4,576,913...4,580,999
JBrowse link
G Aqp2 aquaporin 2 ISO RGD PMID:18717646 RGD:2313130 NCBI chrNW_004955547:547,770...555,764
Ensembl chrNW_004955547:547,064...555,958
JBrowse link
G Arg2 arginase 2 ISO RGD PMID:17874066 RGD:4143285 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060
JBrowse link
G Atm ATM serine/threonine kinase ISO RGD PMID:10822387 RGD:1599368 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha ISO RGD PMID:16215688 RGD:13703103 NCBI chrNW_004955402:31,652,226...31,662,114
Ensembl chrNW_004955402:31,651,960...31,662,762
JBrowse link
G Bad BCL2 associated agonist of cell death involved_in ISO (PMID:19667065) UniProt PMID:19667065 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:14960581) UniProt PMID:14960581 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Bak1 BCL2 antagonist/killer 1 involved_in ISO (PMID:23028632)
(MGI:3581932|PMID:15967824)
RGD
UniProt
MGI
PMID:15967824 PMID:18817839 PMID:23028632 MGI:3581932 RGD:2313963 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (PMID:17428862), (PMID:9660918)
(PMID:9531611)
(MGI:1203837|PMID:9560217)
(MGI:1332944|PMID:10201940)
RGD
ParkinsonsUK-UCL
CACAO
MGI
PMID:9531611 PMID:9560217 PMID:9660918 PMID:10201940 PMID:11751624 PMID:16084019 PMID:17428862 PMID:18817839 PMID:18959742 MGI:1203837 MGI:1332944 RGD:1579962 RGD:2313963 RGD:2314140 RGD:70602 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bbc3 BCL2 binding component 3 involved_in ISO (PMID:26212789) ParkinsonsUK-UCL PMID:26212789 NCBI chrNW_004955574:1,167,790...1,174,966 JBrowse link
G Bcl2 BCL2 apoptosis regulator involved_in ISO (PMID:36599), (PMID:8022822)
(MGI:2156164|PMID:8170972), (MGI:62849|PMID:8372353)
RGD
MGI
PMID:36599 PMID:8022822 PMID:8170972 PMID:8372353 PMID:18959742 MGI:2156164 MGI:62849 RGD:2314140 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Bcl2l1 BCL2 like 1 ISO RGD PMID:18959742 RGD:2314140 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
G Bcl2l14 BCL2 like 14 involved_in ISO (PMID:17280616) UniProt PMID:17280616 NCBI chrNW_004955413:9,040,272...9,069,266
Ensembl chrNW_004955413:9,055,126...9,069,007
JBrowse link
G Bnip1 BCL2 interacting protein 1 involved_in ISO (PMID:7954800) RGD
MGI
PMID:7954800 PMID:12714334 RGD:634759 NCBI chrNW_004955408:25,774,305...25,788,802
Ensembl chrNW_004955408:25,774,305...25,790,983
JBrowse link
G Bnip2 BCL2 interacting protein 2 involved_in ISO (PMID:7954800) MGI PMID:7954800 NCBI chrNW_004955450:15,157,411...15,180,069
Ensembl chrNW_004955450:15,157,226...15,180,069
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:7954800) MGI PMID:7954800 NCBI chrNW_004955477:9,621,812...9,630,406
Ensembl chrNW_004955477:9,621,812...9,638,099
JBrowse link
G Bnipl BCL2 interacting protein like involved_in ISO (PMID:11741952) MGI PMID:11741952 NCBI chrNW_004955588:409,509...417,825
Ensembl chrNW_004955588:409,511...417,825
JBrowse link
G Bok BCL2 family apoptosis regulator BOK involved_in ISO PMID:9356461
(PMID:15102863)
UniProt PMID:9356461 PMID:15102863 RGD:70678 NCBI chrNW_004955542:224,471...232,401
Ensembl chrNW_004955542:224,471...232,428
JBrowse link
G Brat1 BRCA1 associated ATM activator 1 involved_in ISO (PMID:25070371) UniProt PMID:25070371 NCBI chrNW_004955460:12,662,005...12,674,223
Ensembl chrNW_004955460:12,662,779...12,673,287
JBrowse link
G C5ar1 complement C5a receptor 1 ISO RGD PMID:18648551 RGD:5130170 NCBI chrNW_004955574:1,221,942...1,229,634
Ensembl chrNW_004955574:1,221,187...1,231,655
JBrowse link
G Casp2 caspase 2 ISO RGD PMID:18614702 RGD:4107075 NCBI chrNW_004955494:353,572...369,207
Ensembl chrNW_004955494:353,310...368,873
JBrowse link
G Casp3 caspase 3 involved_in ISO (PMID:15565177)
(MGI:2667259|PMID:12847083), (MGI:3770607|PMID:17901126)
(MGI:2159507|PMID:9512515), (MGI:2677082|PMID:12970760)
(MGI:3615714|PMID:16469926)
RGD
UniProt
MGI
PMID:9512515 PMID:12847083 PMID:12970760 PMID:15565177 PMID:16469926 PMID:17901126 PMID:18817839 MGI:2159507 MGI:2667259 MGI:2677082 MGI:3615714 MGI:3770607 RGD:2313963 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Casp7 caspase 7 involved_in ISO (MGI:3615714|PMID:16469926)
(PMID:17464193)
MGI
UniProt
PMID:16469926 PMID:17464193 MGI:3615714 NCBI chrNW_004955431:18,685,408...18,723,221
Ensembl chrNW_004955431:18,686,190...18,723,524
JBrowse link
G Casp8 caspase 8 involved_in ISO (PMID:17599062)
(PMID:22891283)
(MGI:3603971|PMID:16183742)
RGD
MGI
UniProt
PMID:11841995 PMID:16183742 PMID:17599062 PMID:22891283 MGI:3603971 RGD:632452 NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053
JBrowse link
G Casp9 caspase 9 involved_in ISO (PMID:15069058)
(MGI:3615714|PMID:16469926)
(MGI:2667259|PMID:12847083), (MGI:3770607|PMID:17901126)
RGD
UniProt
MGI
PMID:12847083 PMID:15069058 PMID:16469926 PMID:17901126 PMID:18817839 MGI:2667259 MGI:3615714 MGI:3770607 RGD:2313963 NCBI chrNW_004955527:2,613,691...2,630,217
Ensembl chrNW_004955527:2,613,683...2,629,738
JBrowse link
G Casr calcium sensing receptor ISO RGD PMID:20409080 RGD:7206835 NCBI chrNW_004955427:21,486,608...21,574,017
Ensembl chrNW_004955427:21,486,427...21,575,210
JBrowse link
G Cck cholecystokinin ISO RGD PMID:11964411 RGD:625521 NCBI chrNW_004955420:28,438,806...28,443,458
Ensembl chrNW_004955420:28,438,806...28,443,458
JBrowse link
G Cckbr cholecystokinin B receptor ISO RGD PMID:17088981 RGD:2311330 NCBI chrNW_004955414:22,001,351...22,011,275
Ensembl chrNW_004955414:22,000,436...22,011,433
JBrowse link
G Cdip1 cell death inducing p53 target 1 involved_in ISO (PMID:17599062) MGI PMID:17599062 NCBI chrNW_004955442:12,895,403...12,913,517
Ensembl chrNW_004955442:12,895,702...12,913,517
JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO (MGI:87730|PMID:9126296) MGI PMID:9126296 MGI:87730 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280
JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator involved_in ISO (PMID:21737330) UniProt PMID:21737330 NCBI chrNW_004955403:415,092...442,214
Ensembl chrNW_004955403:412,632...434,741
JBrowse link
G Chek1 checkpoint kinase 1 involved_in ISO (PMID:23028632) UniProt PMID:23028632 NCBI chrNW_004955412:26,627,606...26,650,554 JBrowse link
G Chek2 checkpoint kinase 2 ISO (MGI:3805397|PMID:18614044) MGI PMID:18614044 MGI:3805397 NCBI chrNW_004955455:2,969,113...3,008,004
Ensembl chrNW_004955455:2,969,270...3,003,173
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in ISO (PMID:10366599) HGNC-UCL PMID:10366599 NCBI chrNW_004955416:15,102,632...15,106,372
Ensembl chrNW_004955416:15,102,632...15,106,372
JBrowse link
G Cideb cell death inducing DFFA like effector b involved_in ISO (PMID:12429024) MGI PMID:12429024 NCBI chrNW_004955409:35,993,853...35,996,935
Ensembl chrNW_004955409:35,993,853...35,996,935
JBrowse link
G Cidec cell death inducing DFFA like effector c involved_in ISO (PMID:12429024) MGI PMID:12429024 NCBI chrNW_004955561:1,363,907...1,376,144 JBrowse link
G Cryaa crystallin alpha A ISO (MGI:3775669|PMID:18056999) MGI PMID:18056999 MGI:3775669 NCBI chrNW_004955407:38,880,088...38,892,946 JBrowse link
G Cst3 cystatin C ISO RGD PMID:16414118 RGD:2306496 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
G Cul1 cullin 1 ISO (MGI:1345782|PMID:10508527) MGI PMID:10508527 MGI:1345782 NCBI chrNW_004955491:4,165,400...4,212,483
Ensembl chrNW_004955491:4,165,561...4,212,054
JBrowse link
G Cyfip2 cytoplasmic FMR1 interacting protein 2 involved_in ISO (PMID:10449408) UniProt PMID:10449408 NCBI chrNW_004955408:11,483,891...11,586,628
Ensembl chrNW_004955408:11,462,837...11,588,378
JBrowse link
G Dap death associated protein involved_in ISO (PMID:7828849) MGI PMID:7828849 NCBI chrNW_004955426:398,593...452,004 JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:10629061)
(PMID:7828849)
UniProt
MGI
PMID:7828849 PMID:10629061 NCBI chrNW_004955432:29,925...254,327
Ensembl chrNW_004955432:29,197...254,379
JBrowse link
G Dapk3 death associated protein kinase 3 involved_in ISO PMID:10602480
(PMID:12917339)
(PMID:10580117)
UniProt PMID:10580117 PMID:10602480 PMID:12917339 RGD:8554171 NCBI chrNW_004955495:4,809,475...4,822,210
Ensembl chrNW_004955495:4,810,474...4,823,259
JBrowse link
G Ddit3 DNA damage inducible transcript 3 ISO (MGI:5448503|PMID:22265908) UniProt PMID:22265908 MGI:5448503 NCBI chrNW_004955458:5,232,979...5,238,513
Ensembl chrNW_004955458:5,232,979...5,238,513
JBrowse link
G Ddit4 DNA damage inducible transcript 4 ISO RGD PMID:11884613 RGD:633979 NCBI chrNW_004955437:19,322,407...19,324,562
Ensembl chrNW_004955437:19,322,407...19,324,562
JBrowse link
G Dio3 iodothyronine deiodinase 3 ISO (MGI:4441081|PMID:20203194) MGI PMID:20203194 MGI:4441081 NCBI chrNW_004955538:1,042,949...1,045,038 JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein involved_in ISO (PMID:17292327) UniProt PMID:17292327 NCBI chrNW_004955463:3,599,415...3,981,187
Ensembl chrNW_004955463:3,598,985...3,990,849
JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ISO (MGI:3612004|PMID:16327803) MGI PMID:16327803 MGI:3612004 NCBI chrNW_004955442:12,971,031...13,002,605
Ensembl chrNW_004955442:12,967,438...13,010,943
JBrowse link
G Ece1 endothelin converting enzyme 1 ISO RGD PMID:15733912 RGD:1581735 NCBI chrNW_004955452:1,653,783...1,704,619
Ensembl chrNW_004955452:1,651,316...1,751,489
JBrowse link
G Efna5 ephrin A5 NOT|involved_in ISO (PMID:11870224) UniProt PMID:11870224 NCBI chrNW_004955418:6,919,270...7,188,561
Ensembl chrNW_004955418:6,920,919...7,185,478
JBrowse link
G Egln3 egl-9 family hypoxia inducible factor 3 involved_in ISO (PMID:20978507) UniProt PMID:20978507 NCBI chrNW_004955409:26,939,933...26,967,156
Ensembl chrNW_004955409:26,939,933...26,967,156
JBrowse link
G Eif5a eukaryotic translation initiation factor 5A involved_in ISO (PMID:15371445), (PMID:17187778) UniProt PMID:15371445 PMID:17187778 NCBI chrNW_004955467:9,603,800...9,608,490 JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:9194565) UniProt PMID:9194565 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Epo erythropoietin ISO (MGI:3762687|PMID:17300687) MGI PMID:17300687 MGI:3762687 NCBI chrNW_004955573:203,875...206,078
Ensembl chrNW_004955573:203,441...206,355
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in ISO (PMID:8675009) UniProt PMID:8675009 NCBI chrNW_004955555:2,355,005...2,369,599
Ensembl chrNW_004955555:2,355,005...2,369,599
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:8675009) UniProt PMID:8675009 NCBI chrNW_004955459:3,210,936...3,238,401
Ensembl chrNW_004955459:3,210,479...3,242,576
JBrowse link
G Fadd Fas associated via death domain involved_in ISO (PMID:22891283) UniProt PMID:22891283 NCBI chrNW_004955422:16,026,323...16,035,808
Ensembl chrNW_004955422:16,031,280...16,036,281
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (MGI:81811|PMID:8700551)
(PMID:9681877)
MGI PMID:8700551 PMID:9681877 MGI:81811 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Fastkd2 FAST kinase domains 2 involved_in ISO (PMID:18771761) UniProt PMID:18771761 NCBI chrNW_004955457:8,191,861...8,213,003
Ensembl chrNW_004955457:8,189,558...8,211,832
JBrowse link
G Fgf13 fibroblast growth factor 13 NOT ISO (MGI:5431268|PMID:22726441) UniProt PMID:22726441 MGI:5431268 NCBI chrNW_004955489:6,122,707...6,621,624 JBrowse link
G Foxo1 forkhead box O1 involved_in ISO (PMID:31063815) UniProt PMID:31063815 NCBI chrNW_004955431:5,797,359...5,890,758 JBrowse link
G Foxo3 forkhead box O3 ISO RGD PMID:19258007 RGD:10402200 NCBI chrNW_004955411:33,655,958...33,770,829
Ensembl chrNW_004955411:33,655,958...33,770,829
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase ISO RGD PMID:10424669 RGD:632777 NCBI chrNW_004955413:4,162,467...4,166,783
Ensembl chrNW_004955413:4,162,467...4,166,783
JBrowse link
G Gja1 gap junction protein alpha 1 ISO RGD PMID:17107662 RGD:1601339 NCBI chrNW_004955436:3,612,533...3,618,095
Ensembl chrNW_004955436:3,612,533...3,618,095
JBrowse link
G Gjb6 gap junction protein beta 6 ISO RGD PMID:12359154 RGD:632751 NCBI chrNW_004955497:1,018,610...1,027,593
Ensembl chrNW_004955497:1,018,610...1,027,360
JBrowse link
G Gpx1 glutathione peroxidase 1 ISO (MGI:3662803|PMID:16934683), (MGI:3662804|PMID:16962942) MGI PMID:16934683 PMID:16962942 MGI:3662803 MGI:3662804 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO RGD PMID:9234736 RGD:69808 NCBI chrNW_004955416:1,812,725...1,825,528
Ensembl chrNW_004955416:1,812,676...1,826,271
JBrowse link
G Gsdma gasdermin A involved_in ISO (PMID:17471240) UniProt PMID:17471240 NCBI chrNW_004955451:14,650,342...14,663,609
Ensembl chrNW_004955451:14,650,344...14,663,609
JBrowse link
G Gsn gelsolin ISO RGD PMID:10698078 RGD:1599868 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361
JBrowse link
G Hip1 huntingtin interacting protein 1 involved_in ISO (PMID:11788820) MGI PMID:11788820 NCBI chrNW_004955456:14,389,282...14,529,317
Ensembl chrNW_004955456:14,392,921...14,529,213
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO RGD PMID:14988264 RGD:1358731 NCBI chrNW_004955476:11,508,446...11,510,333
Ensembl chrNW_004955476:11,508,126...11,510,333
JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:7828849) MGI PMID:7828849 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Ift57 intraflagellar transport 57 involved_in ISO (PMID:11788820) MGI PMID:11788820 NCBI chrNW_004955427:8,814,298...8,871,671
Ensembl chrNW_004955427:8,814,298...8,871,720
JBrowse link
G Ing4 inhibitor of growth family member 4 involved_in ISO (PMID:15251430) UniProt PMID:15251430 NCBI chrNW_004955413:4,263,647...4,274,476
Ensembl chrNW_004955413:4,263,647...4,274,476
JBrowse link
G Irf1 interferon regulatory factor 1 involved_in ISO (PMID:19851330) UniProt PMID:19851330 NCBI chrNW_004955408:3,882,282...3,887,965
Ensembl chrNW_004955408:3,880,155...3,887,973
JBrowse link
G Kat5 lysine acetyltransferase 5 ISO RGD PMID:11416127 RGD:9588319 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
JBrowse link
G Kremen1 kringle containing transmembrane protein 1 ISO (MGI:5883198|PMID:26206087) UniProt PMID:26206087 MGI:5883198 NCBI chrNW_004955455:3,308,740...3,368,690
Ensembl chrNW_004955455:3,320,346...3,368,690
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase ISO RGD PMID:7930951 RGD:1600237 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310
JBrowse link
G Lmnb1 lamin B1 ISO RGD PMID:20204270 RGD:10044249 NCBI chrNW_004955521:4,583,691...4,612,271
Ensembl chrNW_004955521:4,583,671...4,612,271
JBrowse link
G LOC102011427 chromosome unknown open reading frame, human C19orf12 involved_in ISO (PMID:26136767) UniProt PMID:26136767 NCBI chrNW_004955468:7,903,438...7,914,038
Ensembl chrNW_004955468:7,903,432...7,914,038
JBrowse link
G LOC102023786 cytochrome c, somatic ISO (MGI:3652666|PMID:16757556) RGD
MGI
PMID:16757556 PMID:18817839 MGI:3652666 RGD:2313963 NCBI chrNW_004955410:27,086,405...27,089,255
Ensembl chrNW_004955410:27,086,405...27,089,255
JBrowse link
G Map2k6 mitogen-activated protein kinase kinase 6 ISO RGD PMID:17007737 RGD:1582278 NCBI chrNW_004955478:3,331,607...3,448,840
Ensembl chrNW_004955478:3,331,607...3,448,842
JBrowse link
G Mapt microtubule associated protein tau ISO RGD PMID:15750210 RGD:1599925 NCBI chrNW_004955478:10,222,439...10,271,439
Ensembl chrNW_004955478:10,225,823...10,271,442
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in ISO (PMID:26196677) UniProt PMID:26196677 NCBI chrNW_004955429:16,012,345...16,027,151
Ensembl chrNW_004955429:16,012,173...16,027,277
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (MGI:6303570|PMID:30879903)
(PMID:30879903)
UniProt PMID:30879903 MGI:6303570 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808
JBrowse link
G Melk maternal embryonic leucine zipper kinase involved_in ISO (PMID:17280616) UniProt PMID:17280616 NCBI chrNW_004955419:29,718,291...29,815,163
Ensembl chrNW_004955419:29,717,978...29,815,170
JBrowse link
G Mtfp1 mitochondrial fission process 1 ISO (MGI:6276530|PMID:30325740) MGI PMID:30325740 MGI:6276530 NCBI chrNW_004955455:4,660,847...4,664,323
Ensembl chrNW_004955455:4,660,904...4,664,323
JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming ISO (MGI:2159585|PMID:11872843) MGI PMID:11872843 MGI:2159585 NCBI chrNW_004955476:11,108,826...11,135,697 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:22155231) AgBase PMID:22155231 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO RGD PMID:16344068 RGD:1600568 NCBI chrNW_004955456:13,353,780...13,363,956
Ensembl chrNW_004955456:13,354,011...13,363,891
JBrowse link
G Nhlh2 nescient helix-loop-helix 2 ISO (MGI:3723363|PMID:17573818) UniProt PMID:17573818 MGI:3723363 NCBI chrNW_004955435:19,070,715...19,073,678
Ensembl chrNW_004955435:19,068,761...19,075,257
JBrowse link
G Nr4a1 nuclear receptor subfamily 4 group A member 1 ISO (MGI:3721333|PMID:17434920) MGI PMID:17434920 MGI:3721333 NCBI chrNW_004955547:2,404,532...2,426,882
Ensembl chrNW_004955547:2,404,532...2,431,050
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 involved_in ISO (PMID:20599942) UniProt PMID:20599942 NCBI chrNW_004955514:5,273,810...5,294,925
Ensembl chrNW_004955514:5,273,810...5,295,710
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:20824293) UniProt PMID:20824293 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:15565177) UniProt PMID:15565177 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO PMID:16229834 RGD
UniProt
PMID:16229834 PMID:17219052 RGD:8554822 RGD:9835345 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710
JBrowse link
G Pdcd6 programmed cell death 6 ISO (MGI:81240|PMID:8560270) MGI PMID:8560270 MGI:81240 NCBI chrNW_004955504:75,378...94,654
Ensembl chrNW_004955504:74,944...98,282
JBrowse link
G Pidd1 p53-induced death domain protein 1 involved_in ISO (PMID:17159900) UniProt PMID:17159900 NCBI chrNW_004955476:11,325,877...11,331,447
Ensembl chrNW_004955476:11,326,626...11,331,360
JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in ISO (PMID:10770950) UniProt PMID:10770950 NCBI chrNW_004955474:10,953,381...10,989,100 JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in ISO (MGI:6436981|PMID:21785166)
(PMID:12649167)
UniProt PMID:12649167 PMID:21785166 MGI:6436981 NCBI chrNW_004955467:9,534,462...9,539,738
Ensembl chrNW_004955467:9,535,261...9,539,738
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:17599062) RGD
MGI
PMID:17599062 PMID:18959742 RGD:2314140 NCBI chrNW_004955402:44,005,517...44,010,722 JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:9583681) UniProt PMID:9583681 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Polb DNA polymerase beta ISO (MGI:5553198|PMID:24388753) MGI PMID:24388753 MGI:5553198 NCBI chrNW_004955536:542,179...595,198
Ensembl chrNW_004955536:540,836...595,198
JBrowse link
G Polr2g RNA polymerase II subunit G ISO RGD PMID:17356516 RGD:2303047 NCBI chrNW_004955599:469,233...471,761
Ensembl chrNW_004955599:464,879...471,976
JBrowse link
G Ppard peroxisome proliferator activated receptor delta involved_in ISO (PMID:12909723) CACAO PMID:12909723 NCBI chrNW_004955437:3,285,281...3,354,099
Ensembl chrNW_004955437:3,288,830...3,357,048
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:15130913)
(PMID:31063815)
UniProt PMID:15130913 PMID:31063815 NCBI chrNW_004955456:7,381,923...7,383,203 JBrowse link
G Prf1 perforin 1 ISO RGD PMID:15843543 RGD:6482825 NCBI chrNW_004955437:20,700,912...20,705,076
Ensembl chrNW_004955437:20,700,718...20,706,929
JBrowse link
G Prkcd protein kinase C delta involved_in ISO PMID:21696630
(PMID:10770950), (PMID:12649167)
CACAO
UniProt
PMID:10770950 PMID:12649167 PMID:21696630 RGD:10047294 NCBI chrNW_004955430:3,125,066...3,151,857
Ensembl chrNW_004955430:3,124,738...3,153,274
JBrowse link
G Relt RELT TNF receptor involved_in ISO (PMID:16530727), (PMID:28688764) UniProt PMID:16530727 PMID:28688764 NCBI chrNW_004955414:18,074,487...18,104,972
Ensembl chrNW_004955414:18,075,448...18,093,548
JBrowse link
G Rfk riboflavin kinase involved_in ISO (PMID:19641494) MGI PMID:19641494 NCBI chrNW_004955512:2,889,265...2,898,195
Ensembl chrNW_004955512:2,890,106...2,898,195
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in ISO (MGI:5926457|PMID:28842570), (MGI:6120592|PMID:29440439), (MGI:6362112|PMID:31519886), (MGI:6362574|PMID:31519887), (MGI:6369186|PMID:30867408), (MGI:6378798|PMID:31511692)
(PMID:21737330), (PMID:22891283), (PMID:29440439)
UniProt PMID:21737330 PMID:22891283 PMID:28842570 PMID:29440439 PMID:30867408 PMID:31511692 PMID:31519886 PMID:31519887 MGI:5926457 MGI:6120592 MGI:6362112 MGI:6362574 MGI:6369186 MGI:6378798 NCBI chrNW_004955465:10,127,907...10,167,895
Ensembl chrNW_004955465:10,128,931...10,168,399
JBrowse link
G Scml2 Scm polycomb group protein like 2 ISO (MGI:5645866|PMID:25634095) MGI PMID:25634095 MGI:5645866 NCBI chrNW_004955519:16,839...84,226
Ensembl chrNW_004955519:3,696...84,237
JBrowse link
G Sema3a semaphorin 3A ISO RGD PMID:12376549 RGD:729827 NCBI chrNW_004955410:2,146,088...2,344,342
Ensembl chrNW_004955410:2,144,388...2,338,973
JBrowse link
G Sfrp2 secreted frizzled related protein 2 ISO (MGI:3806414|PMID:18729207) MGI PMID:18729207 MGI:3806414 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321
JBrowse link
G Shc4 SHC adaptor protein 4 ISO (MGI:5474441|PMID:22948967) MGI PMID:22948967 MGI:5474441 NCBI chrNW_004955409:5,000,209...5,111,352
Ensembl chrNW_004955409:5,046,900...5,115,621
JBrowse link
G Stk17b serine/threonine kinase 17b ISO PMID:11481038 UniProt PMID:11481038 RGD:634154 NCBI chrNW_004955403:4,116,130...4,145,698
Ensembl chrNW_004955403:4,115,766...4,145,698
JBrowse link
G Stk4 serine/threonine kinase 4 involved_in ISO (PMID:21212262) UniProt PMID:21212262 NCBI chrNW_004955445:12,308,285...12,399,012
Ensembl chrNW_004955445:12,308,285...12,399,012
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 ISO (MGI:1344821|PMID:10469660) MGI PMID:10469660 MGI:1344821 NCBI chrNW_004955414:22,322,954...22,324,412
Ensembl chrNW_004955414:22,323,031...22,324,367
JBrowse link
G Tchp trichoplein keratin filament binding involved_in ISO (PMID:18931701) UniProt PMID:18931701 NCBI chrNW_004955455:8,681,058...8,696,996 JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 ISO (MGI:5488585|PMID:21305608)
(MGI:6296816|PMID:23908015)
MGI PMID:21305608 PMID:23908015 MGI:5488585 MGI:6296816 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003
JBrowse link
G Tfpt TCF3 fusion partner ISO PMID:16229834 UniProt PMID:16229834 RGD:8554822 NCBI chrNW_004955604:136,357...139,799
Ensembl chrNW_004955604:136,427...139,761
JBrowse link
G Tgfb1 transforming growth factor beta 1 NOT|involved_in ISO (PMID:3470709) UniProt PMID:3470709 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (PMID:17471240) UniProt PMID:17471240 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837
JBrowse link
G Thoc1 THO complex 1 involved_in ISO (PMID:10512864) UniProt PMID:10512864 NCBI chrNW_004955402:9,675,211...9,708,045
Ensembl chrNW_004955402:9,675,204...9,708,045
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 ISO RGD PMID:11751455 RGD:10043305 NCBI chrNW_004955407:30,804,769...31,178,420
Ensembl chrNW_004955407:30,803,653...30,942,854
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:12077131 RGD:625484 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 involved_in ISO (PMID:22761420) UniProt PMID:22761420 NCBI chrNW_004955437:11,877,051...11,915,220
Ensembl chrNW_004955437:11,876,895...11,915,460
JBrowse link
G Topaz1 testis and ovary specific PAZ domain containing 1 ISO (MGI:5697228|PMID:26358182) MGI PMID:26358182 MGI:5697228 NCBI chrNW_004955420:27,048,650...27,106,983
Ensembl chrNW_004955420:27,048,713...27,107,006
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:3709911|PMID:17325035)
(MGI:3603971|PMID:16183742)
MGI PMID:16183742 PMID:17325035 MGI:3603971 MGI:3709911 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Traf7 TNF receptor associated factor 7 involved_in ISO (PMID:15001576) MGI PMID:15001576 NCBI chrNW_004955442:15,092,955...15,112,842
Ensembl chrNW_004955442:15,092,955...15,112,840
JBrowse link
G Umod uromodulin ISO (MGI:6094531|PMID:29145399) MGI PMID:29145399 MGI:6094531 NCBI chrNW_004955442:3,986,936...4,001,155
Ensembl chrNW_004955442:3,985,308...3,999,598
JBrowse link
G Usp53 ubiquitin specific peptidase 53 ISO (MGI:5703670|PMID:26609154) MGI PMID:26609154 MGI:5703670 NCBI chrNW_004955428:20,957,807...21,023,380
Ensembl chrNW_004955428:20,957,807...21,023,380
JBrowse link
G Vdac1 voltage dependent anion channel 1 involved_in ISO (PMID:25296756) UniProt PMID:25296756 NCBI chrNW_004955408:5,260,444...5,275,972 JBrowse link
G Wt1 WT1 transcription factor ISO (MGI:3612377|PMID:16418481) MGI PMID:16418481 MGI:3612377 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 ISO (MGI:3047495|PMID:15226444) MGI PMID:15226444 MGI:3047495 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617
JBrowse link
G Znf385a zinc finger protein 385A ISO (MGI:5508602|PMID:17719541) UniProt PMID:17719541 MGI:5508602 NCBI chrNW_004955458:1,610,245...1,631,639
Ensembl chrNW_004955458:1,610,245...1,631,639
JBrowse link
apoptotic process in bone marrow cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 ISO (MGI:1351384|PMID:10618441) MGI PMID:10618441 MGI:1351384 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
apoptotic process involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2 antagonist/killer 1 ISO (MGI:3692135|PMID:15955981) MGI PMID:15955981 MGI:3692135 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:3692135|PMID:15955981) MGI PMID:15955981 MGI:3692135 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO (MGI:3604165|PMID:16163358) MGI PMID:16163358 MGI:3604165 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO (MGI:3604165|PMID:16163358) MGI PMID:16163358 MGI:3604165 NCBI chrNW_004955422:17,394,371...17,475,244
Ensembl chrNW_004955422:17,394,371...17,505,763
JBrowse link
G Spi1 Spi-1 proto-oncogene ISO (MGI:3604165|PMID:16163358) MGI PMID:16163358 MGI:3604165 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560
JBrowse link
G Wnt7b Wnt family member 7B ISO (MGI:3604165|PMID:16163358) MGI PMID:16163358 MGI:3604165 NCBI chrNW_004955413:30,146,185...30,185,693
Ensembl chrNW_004955413:30,144,869...30,181,791
JBrowse link
apoptotic process involved in development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 ISO (MGI:1860048|PMID:10859163) MGI PMID:10859163 MGI:1860048 NCBI chrNW_004955412:26,627,606...26,650,554 JBrowse link
G Megf10 multiple EGF like domains 10 ISO (MGI:5775214|PMID:27170117) MGI PMID:27170117 MGI:5775214 NCBI chrNW_004955415:393,642...513,157
Ensembl chrNW_004955415:335,012...513,891
JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Zpr1 ZPR1 zinc finger ISO (MGI:3575865|PMID:15767679) UniProt PMID:15767679 MGI:3575865 NCBI chrNW_004955412:18,117,957...18,127,552
Ensembl chrNW_004955412:18,116,531...18,127,552
JBrowse link
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:3581932|PMID:15967824) MGI PMID:15967824 MGI:3581932 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bcl2l11 BCL2 like 11 ISO (MGI:3581932|PMID:15967824) MGI PMID:15967824 MGI:3581932 NCBI chrNW_004955470:2,740,682...2,780,225 JBrowse link
G Notch1 notch receptor 1 ISO (MGI:3608163|PMID:16245338) MGI PMID:16245338 MGI:3608163 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
apoptotic process involved in endocardial cushion morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 NOT ISO (MGI:3814273|PMID:18924235) BHF-UCL PMID:18924235 MGI:3814273 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
apoptotic process involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn1 cellular communication network factor 1 ISO (MGI:3761425|PMID:17023674) MGI PMID:17023674 MGI:3761425 NCBI chrNW_004955423:8,416,498...8,419,029
Ensembl chrNW_004955423:8,413,725...8,419,166
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 ISO (MGI:2153294|PMID:11784028) MGI PMID:11784028 MGI:2153294 NCBI chrNW_004955403:33,478,034...33,481,613
Ensembl chrNW_004955403:33,478,924...33,481,608
JBrowse link
G Nkx2-5 NK2 homeobox 5 ISO (MGI:3773736|PMID:16510504) MGI PMID:16510504 MGI:3773736 NCBI chrNW_004955408:25,833,649...25,836,673
Ensembl chrNW_004955408:25,832,683...25,836,840
JBrowse link
apoptotic process involved in luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:18566128) UniProt PMID:18566128 NCBI chrNW_004955407:14,301,689...15,549,561
Ensembl chrNW_004955407:14,305,498...14,842,790
JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:18566128) UniProt PMID:18566128 NCBI chrNW_004955480:3,982,977...4,314,160
Ensembl chrNW_004955480:3,984,586...4,313,908
JBrowse link
G Slit3 slit guidance ligand 3 involved_in ISO (PMID:18566128) UniProt PMID:18566128 NCBI chrNW_004955408:21,719,487...22,322,958
Ensembl chrNW_004955408:21,722,632...22,322,917
JBrowse link
apoptotic process involved in morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cryaa crystallin alpha A ISO (MGI:3617146|PMID:16439475) MGI PMID:16439475 MGI:3617146 NCBI chrNW_004955407:38,880,088...38,892,946 JBrowse link
G Cryab crystallin alpha B ISO (MGI:3617146|PMID:16439475) MGI PMID:16439475 MGI:3617146 NCBI chrNW_004955412:13,626,018...13,629,495
Ensembl chrNW_004955412:13,625,363...13,640,426
JBrowse link
G Fgf4 fibroblast growth factor 4 ISO (MGI:3530724|PMID:15649466) MGI PMID:15649466 MGI:3530724 NCBI chrNW_004955422:16,362,418...16,364,126 JBrowse link
G Fzd5 frizzled class receptor 5 ISO (MGI:3821812|PMID:18791178) MGI PMID:18791178 MGI:3821812 NCBI chrNW_004955457:7,282,403...7,288,918
Ensembl chrNW_004955457:7,282,403...7,288,918
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO (MGI:3530724|PMID:15649466) MGI PMID:15649466 MGI:3530724 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698
JBrowse link
G Ppp2r1b protein phosphatase 2 scaffold subunit Abeta involved_in ISO (PMID:21172653) UniProt PMID:21172653 NCBI chrNW_004955412:13,458,078...13,494,583
Ensembl chrNW_004955412:13,458,136...13,494,585
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (PMID:19041750) UniProt PMID:19041750 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098
JBrowse link
apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa6 annexin A6 ISO (MGI:5485084|PMID:23341998) CACAO PMID:23341998 MGI:5485084 NCBI chrNW_004955408:2,522,027...2,565,862
Ensembl chrNW_004955408:2,522,027...2,570,426
JBrowse link
G Bad BCL2 associated agonist of cell death ISO (MGI:2158953|PMID:11717309), (MGI:3057092|PMID:15231831)
(MGI:2671672|PMID:12931191)
MGI PMID:11717309 PMID:12931191 PMID:15231831 MGI:2158953 MGI:2671672 MGI:3057092 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bak1 BCL2 antagonist/killer 1 involved_in ISO (PMID:15901672) UniProt PMID:15901672 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (MGI:2676517|PMID:14507967), (MGI:2677915|PMID:12925707)
(PMID:16424160)
MGI
HGNC-UCL
PMID:12925707 PMID:14507967 PMID:16424160 MGI:2676517 MGI:2677915 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bbc3 BCL2 binding component 3 involved_in ISO (PMID:11463392) UniProt PMID:11463392 NCBI chrNW_004955574:1,167,790...1,174,966 JBrowse link
G Casp2 caspase 2 ISO (MGI:2450211|PMID:12477715), (MGI:3603971|PMID:16183742) MGI PMID:12477715 PMID:16183742 MGI:2450211 MGI:3603971 NCBI chrNW_004955494:353,572...369,207
Ensembl chrNW_004955494:353,310...368,873
JBrowse link
G Casp8 caspase 8 involved_in ISO (MGI:3603971|PMID:16183742)
(PMID:11101870)
MGI
BHF-UCL
PMID:11101870 PMID:16183742 MGI:3603971 NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053
JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:21382479) UniProt PMID:21382479 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Cd24 CD24 molecule ISO (MGI:2686748|PMID:14707049), (MGI:3757615|PMID:8920854), (MGI:3757616|PMID:8943715) MGI PMID:8920854 PMID:8943715 PMID:14707049 MGI:2686748 MGI:3757615 MGI:3757616 NCBI chrNW_004955411:32,270,881...32,275,236 JBrowse link
G Cd28 CD28 molecule ISO (MGI:1340173|PMID:10429671) MGI PMID:10429671 MGI:1340173 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991
JBrowse link
G Cd3e CD3e molecule ISO (MGI:80946|PMID:8666928) MGI PMID:8666928 MGI:80946 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990
JBrowse link
G Cd5 CD5 molecule ISO (MGI:1340173|PMID:10429671) MGI PMID:10429671 MGI:1340173 NCBI chrNW_004955511:5,656,333...5,670,510
Ensembl chrNW_004955511:5,664,682...5,669,368
JBrowse link
G Dap death associated protein involved_in ISO (PMID:1087798), (PMID:7828849) UniProt PMID:1087798 PMID:7828849 NCBI chrNW_004955426:398,593...452,004 JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:7828849) UniProt PMID:7828849 NCBI chrNW_004955432:29,925...254,327
Ensembl chrNW_004955432:29,197...254,379
JBrowse link
G Dapk3 death associated protein kinase 3 ISO (MGI:3687891|PMID:12917339)
(MGI:1196722|PMID:9488481)
MGI PMID:9488481 PMID:12917339 MGI:1196722 MGI:3687891 NCBI chrNW_004955495:4,809,475...4,822,210
Ensembl chrNW_004955495:4,810,474...4,823,259
JBrowse link
G Daxx death domain associated protein ISO (MGI:3687891|PMID:12917339) MGI PMID:12917339 MGI:3687891 NCBI chrNW_004955437:1,869,692...1,874,041
Ensembl chrNW_004955437:1,869,572...1,873,050
JBrowse link
G Dido1 death inducer-obliterator 1 ISO (MGI:1340704|PMID:10393935) MGI PMID:10393935 MGI:1340704 NCBI chrNW_004955528:1,153,181...1,207,346
Ensembl chrNW_004955528:1,162,836...1,207,596
JBrowse link
G Fadd Fas associated via death domain involved_in ISO (PMID:11101870) BHF-UCL PMID:11101870 NCBI chrNW_004955422:16,026,323...16,035,808
Ensembl chrNW_004955422:16,031,280...16,036,281
JBrowse link
G Fas Fas cell surface death receptor ISO (MGI:65483|PMID:7511063), (MGI:80946|PMID:8666928) RGD
MGI
PMID:7511063 PMID:8666928 PMID:16953119 MGI:65483 MGI:80946 RGD:1600313 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Faslg Fas ligand involved_in ISO (MGI:3525895|PMID:15629131), (MGI:65483|PMID:7511063)
(PMID:11101870)
MGI
BHF-UCL
PMID:7511063 PMID:11101870 PMID:15629131 MGI:3525895 MGI:65483 NCBI chrNW_004955406:13,098,479...13,107,045
Ensembl chrNW_004955406:13,098,662...13,107,389
JBrowse link
G Hip1 huntingtin interacting protein 1 involved_in ISO (PMID:11007801) UniProt PMID:11007801 NCBI chrNW_004955456:14,389,282...14,529,317
Ensembl chrNW_004955456:14,392,921...14,529,213
JBrowse link
G Itgam integrin subunit alpha M ISO (MGI:3812233|PMID:18685038) ARUK-UCL PMID:18685038 MGI:3812233 NCBI chrNW_004955493:8,116,886...8,160,806
Ensembl chrNW_004955493:8,116,834...8,260,759
JBrowse link
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 involved_in ISO (PMID:10924506) UniProt PMID:10924506 NCBI chrNW_004955524:2,426,604...2,433,682
Ensembl chrNW_004955524:2,426,604...2,433,679
JBrowse link
G P2rx4 purinergic receptor P2X 4 involved_in ISO (PMID:17264311) BHF-UCL PMID:17264311 NCBI chrNW_004955482:7,031,874...7,039,026
Ensembl chrNW_004955482:7,031,874...7,039,220
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO PMID:12857854 BHF-UCL PMID:12857854 RGD:8554350 NCBI chrNW_004955482:7,048,674...7,087,525
Ensembl chrNW_004955482:7,048,776...7,086,926
JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO (MGI:3687891|PMID:12917339) MGI PMID:12917339 MGI:3687891 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710
JBrowse link
G Pidd1 p53-induced death domain protein 1 ISO (MGI:3603971|PMID:16183742) MGI PMID:16183742 MGI:3603971 NCBI chrNW_004955476:11,325,877...11,331,447
Ensembl chrNW_004955476:11,326,626...11,331,360
JBrowse link
G Ppard peroxisome proliferator activated receptor delta involved_in ISO (PMID:11551955) UniProt PMID:11551955 NCBI chrNW_004955437:3,285,281...3,354,099
Ensembl chrNW_004955437:3,288,830...3,357,048
JBrowse link
G Ptgis prostaglandin I2 synthase involved_in ISO (PMID:11551955) UniProt PMID:11551955 NCBI chrNW_004955445:8,624,228...8,663,385
Ensembl chrNW_004955445:8,623,430...8,677,658
JBrowse link
G Senp1 SUMO specific peptidase 1 involved_in ISO (PMID:1087798) UniProt PMID:1087798 NCBI chrNW_004955500:6,924,445...6,978,482
Ensembl chrNW_004955500:6,926,548...6,979,230
JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 involved_in ISO (PMID:14570870) UniProt PMID:14570870 NCBI chrNW_004955437:20,489,641...20,547,105
Ensembl chrNW_004955437:20,488,330...20,547,171
JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:5559673|PMID:11044396) Roslin_Institute PMID:11044396 MGI:5559673 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Spn sialophorin ISO (MGI:1340173|PMID:10429671) MGI PMID:10429671 MGI:1340173 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO (PMID:17041757) UniProt PMID:17041757 NCBI chrNW_004955604:136,357...139,799
Ensembl chrNW_004955604:136,427...139,761
JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 ISO (MGI:2670551|PMID:12872135) MGI PMID:12872135 MGI:2670551 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513
JBrowse link
G Tm2d1 TM2 domain containing 1 ISO (MGI:2135414|PMID:11278849) MGI PMID:11278849 MGI:2135414 NCBI chrNW_004955423:27,639,192...27,669,907
Ensembl chrNW_004955423:27,638,387...27,669,574
JBrowse link
G Tnf tumor necrosis factor ISO (MGI:3525895|PMID:15629131), (MGI:67096|PMID:8208546) MGI PMID:8208546 PMID:15629131 MGI:3525895 MGI:67096 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP ISO (MGI:3812233|PMID:18685038) ARUK-UCL PMID:18685038 MGI:3812233 NCBI chrNW_004955468:2,673,657...2,677,633
Ensembl chrNW_004955468:2,673,980...2,677,321
JBrowse link
G Umod uromodulin ISO (MGI:6107740|PMID:28990932) MGI PMID:28990932 MGI:6107740 NCBI chrNW_004955442:3,986,936...4,001,155
Ensembl chrNW_004955442:3,985,308...3,999,598
JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:9579411 RGD:70308 NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048
JBrowse link
autophagic cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp2 acid phosphatase 2, lysosomal ISO RGD PMID:18690537 RGD:4892631 NCBI chrNW_004955422:954,108...961,522
Ensembl chrNW_004955422:954,089...961,522
JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO RGD PMID:19539716 RGD:5128797 NCBI chrNW_004955477:9,621,812...9,630,406
Ensembl chrNW_004955477:9,621,812...9,638,099
JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B involved_in ISO (PMID:12698196) BHF-UCL PMID:12698196 NCBI chrNW_004955413:9,615,542...9,620,542
Ensembl chrNW_004955413:9,615,542...9,620,542
JBrowse link
G Cdkn2d cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:16322758) BHF-UCL PMID:16322758 NCBI chrNW_004955495:1,755,280...1,759,125
Ensembl chrNW_004955495:1,755,878...1,757,037
JBrowse link
G Lamp1 lysosomal associated membrane protein 1 ISO RGD PMID:18690537 RGD:4892631 NCBI chrNW_004955404:557,090...573,532
Ensembl chrNW_004955404:557,862...573,379
JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 involved_in ISO (MGI:3770552|PMID:17891140)
(PMID:17891140)
UniProt PMID:17891140 MGI:3770552 NCBI chrNW_004955423:7,393,186...7,414,199
Ensembl chrNW_004955423:7,393,186...7,423,903
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in ISO (PMID:22421968) UniProt PMID:22421968 NCBI chrNW_004955417:11,063,217...11,079,389
Ensembl chrNW_004955417:11,067,715...11,073,635
JBrowse link
B cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2 antagonist/killer 1 ISO (MGI:3588597|PMID:16055554) MGI PMID:16055554 MGI:3588597 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (MGI:3588597|PMID:16055554)
(PMID:15214043), (PMID:16424160)
MGI
HGNC-UCL
PMID:15214043 PMID:16055554 PMID:16424160 MGI:3588597 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bcl10 BCL10 immune signaling adaptor NOT ISO (MGI:1930354|PMID:11163238)
(MGI:1355482|PMID:10753917)
MGI PMID:10753917 PMID:11163238 MGI:1355482 MGI:1930354 NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050
JBrowse link
G Bcl2l11 BCL2 like 11 ISO (MGI:3588597|PMID:16055554) MGI PMID:16055554 MGI:3588597 NCBI chrNW_004955470:2,740,682...2,780,225 JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein ISO (MGI:6150543|PMID:29581031) MGI PMID:29581031 MGI:6150543 NCBI chrNW_004955442:19,358,202...19,388,552
Ensembl chrNW_004955442:19,358,081...19,388,815
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:3692035|PMID:12970677) MGI PMID:12970677 MGI:3692035 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Pkn1 protein kinase N1 ISO (MGI:5467878|PMID:23223530) MGI PMID:23223530 MGI:5467878 NCBI chrNW_004955415:33,040,868...33,062,753
Ensembl chrNW_004955415:33,043,918...33,063,567
JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 ISO (MGI:3628730|PMID:12515813) UniProt PMID:12515813 MGI:3628730 NCBI chrNW_004955437:11,877,051...11,915,220
Ensembl chrNW_004955437:11,876,895...11,915,460
JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 ISO (MGI:3510272|PMID:15485634) MGI PMID:15485634 MGI:3510272 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288
JBrowse link
B cell receptor apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (PMID:15214043) BHF-UCL PMID:15214043 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
canonical Wnt signaling pathway involved in negative regulation of apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO (MGI:3710040|PMID:17377531) MGI PMID:17377531 MGI:3710040 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832
JBrowse link
G Mitf melanocyte inducing transcription factor ISO (MGI:2386811|PMID:12235125) MGI PMID:12235125 MGI:2386811 NCBI chrNW_004955421:17,948,117...18,157,379
Ensembl chrNW_004955421:17,947,277...18,154,090
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:3710040|PMID:17377531) MGI PMID:17377531 MGI:3710040 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Tcf7 transcription factor 7 ISO (MGI:2386811|PMID:12235125) MGI PMID:12235125 MGI:2386811 NCBI chrNW_004955408:5,362,423...5,388,684
Ensembl chrNW_004955408:5,362,084...5,388,527
JBrowse link
canonical Wnt signaling pathway involved in positive regulation of apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO (MGI:3710040|PMID:17377531) MGI PMID:17377531 MGI:3710040 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:3710040|PMID:17377531) MGI PMID:17377531 MGI:3710040 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
cardiac muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apaf1 apoptotic peptidase activating factor 1 ISO RGD PMID:18197610 RGD:2325741 NCBI chrNW_004955405:34,619,780...34,693,616
Ensembl chrNW_004955405:34,623,267...34,693,677
JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO RGD PMID:12226479 RGD:632019 NCBI chrNW_004955477:9,621,812...9,630,406
Ensembl chrNW_004955477:9,621,812...9,638,099
JBrowse link
G Gnb1 G protein subunit beta 1 involved_in ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004955486:9,165,850...9,192,306
Ensembl chrNW_004955486:9,165,850...9,193,066
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004955432:10,653,508...10,657,811
Ensembl chrNW_004955432:10,643,674...10,658,933
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:21620734 RGD:5686387 NCBI chrNW_004955538:1,469,544...1,475,010 JBrowse link
G Nol3 nucleolar protein 3 ISO (MGI:3710289|PMID:16505176) UniProt PMID:16505176 MGI:3710289 NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095
JBrowse link
G Rps6ka2 ribosomal protein S6 kinase A2 ISO (MGI:3710915|PMID:16585392) MGI PMID:16585392 MGI:3710915 NCBI chrNW_004955439:15,210,882...15,487,305
Ensembl chrNW_004955439:15,332,165...15,487,305
JBrowse link
cell death in response to hydrogen peroxide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf112 ring finger protein 112 ISO (MGI:6154438|PMID:26792191) UniProt PMID:26792191 MGI:6154438 NCBI chrNW_004955467:349,703...355,922
Ensembl chrNW_004955467:349,256...355,922
JBrowse link
G Sigmar1 sigma non-opioid intracellular receptor 1 ISO (MGI:6154438|PMID:26792191) UniProt PMID:26792191 MGI:6154438 NCBI chrNW_004955472:1,493,896...1,496,377
Ensembl chrNW_004955472:1,493,896...1,496,377
JBrowse link
cell death in response to oxidative stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta NOT|involved_in ISO (PMID:25456120) ParkinsonsUK-UCL PMID:25456120 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Rnf112 ring finger protein 112 ISO (MGI:6154496|PMID:27918959) UniProt PMID:27918959 MGI:6154496 NCBI chrNW_004955467:349,703...355,922
Ensembl chrNW_004955467:349,256...355,922
JBrowse link
cellular component disassembly involved in execution phase of apoptosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bok BCL2 family apoptosis regulator BOK ISO (MGI:5705719|PMID:23429263) UniProt PMID:23429263 MGI:5705719 NCBI chrNW_004955542:224,471...232,401
Ensembl chrNW_004955542:224,471...232,428
JBrowse link
cholangiocyte apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Krt18 keratin 18 ISO RGD PMID:30563999 RGD:27226806 NCBI chrNW_004955458:227,017...230,752
Ensembl chrNW_004955458:226,805...232,728
JBrowse link
cornification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers3 ceramide synthase 3 ISO (MGI:5303015|PMID:22038835) UniProt PMID:22038835 MGI:5303015 NCBI chrNW_004955416:27,461,950...27,577,145
Ensembl chrNW_004955416:27,461,335...27,536,188
JBrowse link
G LOC102023166 cytochrome P450 26B1 ISO (MGI:5466369|PMID:22366455) MGI PMID:22366455 MGI:5466369 NCBI chrNW_004955424:13,336,189...13,355,368
Ensembl chrNW_004955424:13,336,189...13,355,423
JBrowse link
G Tmem79 transmembrane protein 79 ISO (MGI:5519142|PMID:24084074) MGI PMID:24084074 MGI:5519142 NCBI chrNW_004955545:2,420,594...2,436,485
Ensembl chrNW_004955545:2,420,592...2,436,485
JBrowse link
cytotoxic T cell pyroptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gzma granzyme A involved_in ISO (PMID:32299851) UniProt PMID:32299851 NCBI chrNW_004955446:12,560,831...12,568,023
Ensembl chrNW_004955446:12,560,658...12,568,053
JBrowse link
death-inducing signaling complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase ISO (MGI:3612236|PMID:16365167) MGI PMID:16365167 MGI:3612236 NCBI chrNW_004955429:17,980,956...18,049,723
Ensembl chrNW_004955429:18,025,932...18,049,723
JBrowse link
ectopic germ cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:2680318|PMID:14660547)
(MGI:3691300|PMID:17107997)
MGI PMID:14660547 PMID:17107997 MGI:2680318 MGI:3691300 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Casp2 caspase 2 ISO (MGI:3691999|PMID:11536012) MGI PMID:11536012 MGI:3691999 NCBI chrNW_004955494:353,572...369,207
Ensembl chrNW_004955494:353,310...368,873
JBrowse link
G Il1a interleukin 1 alpha ISO (MGI:3691999|PMID:11536012) MGI PMID:11536012 MGI:3691999 NCBI chrNW_004955470:1,527,710...1,538,418
Ensembl chrNW_004955470:1,527,674...1,538,466
JBrowse link
G Il1b interleukin 1 beta ISO (MGI:3691999|PMID:11536012) MGI PMID:11536012 MGI:3691999 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947
JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO (MGI:2680318|PMID:14660547) MGI PMID:14660547 MGI:2680318 NCBI chrNW_004955447:16,149,014...16,226,151
Ensembl chrNW_004955447:16,148,605...16,226,734
JBrowse link
G Kitlg KIT ligand ISO (MGI:3691300|PMID:17107997) MGI PMID:17107997 MGI:3691300 NCBI chrNW_004955405:25,816,137...25,969,006
Ensembl chrNW_004955405:25,886,447...25,969,395
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO (MGI:3700621|PMID:17145779) MGI PMID:17145779 MGI:3700621 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
endothelial cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (PMID:25187962) UniProt PMID:25187962 NCBI chrNW_004955457:12,235,780...12,315,680
Ensembl chrNW_004955457:12,235,780...12,316,727
JBrowse link
G Col4a3 collagen type IV alpha 3 chain involved_in ISO (PMID:10766752) UniProt PMID:10766752 NCBI chrNW_004955453:7,261,278...7,351,414 JBrowse link
G Fgf21 fibroblast growth factor 21 ISO RGD PMID:22166524 RGD:10401877 NCBI chrNW_004955559:1,818,400...1,821,423
Ensembl chrNW_004955559:1,817,110...1,820,417
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in ISO (PMID:15701637) UniProt PMID:15701637 NCBI chrNW_004955435:17,201,866...17,257,371
Ensembl chrNW_004955435:17,172,651...17,257,371
JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 ISO RGD PMID:17932313 RGD:10412644 NCBI chrNW_004955439:162,499...376,919
Ensembl chrNW_004955439:163,103...377,808
JBrowse link
G Tnf tumor necrosis factor ISO (MGI:5796069|PMID:26808574) BHF-UCL PMID:26808574 MGI:5796069 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
epithelial cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc5 exocyst complex component 5 ISO (MGI:5699235|PMID:26040895) MGI PMID:26040895 MGI:5699235 NCBI chrNW_004955466:11,115,902...11,191,353
Ensembl chrNW_004955466:11,116,907...11,191,911
JBrowse link
epithelial cell apoptotic process involved in palatal shelf morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 ISO (MGI:3624929|PMID:16607638) MGI PMID:16607638 MGI:3624929 NCBI chrNW_004955538:3,421,685...3,433,829
Ensembl chrNW_004955538:3,421,685...3,433,842
JBrowse link
execution phase of apoptosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm3 apoptosis inducing factor mitochondria associated 3 involved_in ISO (PMID:15764604) BHF-UCL PMID:15764604 NCBI chrNW_004955442:19,334,217...19,346,438
Ensembl chrNW_004955442:19,333,591...19,346,438
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO (MGI:2387238|PMID:12124386) MGI PMID:12124386 MGI:2387238 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Bbc3 BCL2 binding component 3 involved_in ISO (PMID:11463391), (PMID:11463392) UniProt PMID:11463391 PMID:11463392 NCBI chrNW_004955574:1,167,790...1,174,966 JBrowse link
G Casp3 caspase 3 involved_in ISO (MGI:2150278|PMID:11549719)
(PMID:11350920)
(PMID:8689682)
(MGI:3615714|PMID:16469926)
(MGI:2387238|PMID:12124386), (MGI:2674166|PMID:12954857), (MGI:3056854|PMID:15456877)
MGI
BHF-UCL
UniProt
PMID:8689682 PMID:11350920 PMID:11549719 PMID:12124386 PMID:12954857 PMID:15456877 PMID:16469926 MGI:2150278 MGI:2387238 MGI:2674166 MGI:3056854 MGI:3615714 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Casp7 caspase 7 ISO (MGI:3615714|PMID:16469926) MGI PMID:16469926 MGI:3615714 NCBI chrNW_004955431:18,685,408...18,723,221
Ensembl chrNW_004955431:18,686,190...18,723,524
JBrowse link
G Casp8 caspase 8 involved_in ISO (MGI:5602910|PMID:24813850), (MGI:5602911|PMID:24813849)
(PMID:21737330)
UniProt PMID:21737330 PMID:24813849 PMID:24813850 MGI:5602910 MGI:5602911 NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053
JBrowse link
G Cecr2 cat eye syndrome chromosome region, candidate 2 involved_in ISO (PMID:12762840) BHF-UCL PMID:12762840 NCBI chrNW_004955454:5,581,985...5,643,685
Ensembl chrNW_004955454:5,581,981...5,640,712
JBrowse link
G Cideb cell death inducing DFFA like effector b ISO (MGI:1203887|PMID:9564035) BHF-UCL PMID:9564035 MGI:1203887 NCBI chrNW_004955409:35,993,853...35,996,935
Ensembl chrNW_004955409:35,993,853...35,996,935
JBrowse link
G Cidec cell death inducing DFFA like effector c involved_in ISO (PMID:12429024) UniProt PMID:12429024 NCBI chrNW_004955561:1,363,907...1,376,144 JBrowse link
G Madd MAP kinase activating death domain involved_in ISO (MGI:3700423|PMID:14735464)
(PMID:14735464)
UniProt PMID:14735464 MGI:3700423 NCBI chrNW_004955422:902,969...940,201
Ensembl chrNW_004955422:902,969...940,201
JBrowse link
G Stk24 serine/threonine kinase 24 involved_in ISO (PMID:12107159) UniProt PMID:12107159 NCBI chrNW_004955404:11,943,308...12,049,688
Ensembl chrNW_004955404:11,996,837...12,049,688
JBrowse link
G Taok1 TAO kinase 1 involved_in ISO (PMID:16407310) UniProt PMID:16407310 NCBI chrNW_004955481:3,698,686...3,836,209
Ensembl chrNW_004955481:3,705,202...3,772,116
JBrowse link
execution phase of necroptosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlkl mixed lineage kinase domain like pseudokinase ISO (MGI:6434626|PMID:32296175), (MGI:6436412|PMID:32200799)
(MGI:6436434|PMID:27321907)
UniProt PMID:27321907 PMID:32200799 PMID:32296175 MGI:6434626 MGI:6436412 MGI:6436434 NCBI chrNW_004955484:2,793,092...2,819,481
Ensembl chrNW_004955484:2,796,995...2,818,844
JBrowse link
G Ripk3 receptor interacting serine/threonine kinase 3 ISO (MGI:6436445|PMID:27746097), (MGI:6442612|PMID:27917412) UniProt PMID:27746097 PMID:27917412 MGI:6436445 MGI:6442612 NCBI chrNW_004955409:35,961,604...35,965,477
Ensembl chrNW_004955409:35,937,880...35,965,712
JBrowse link
extrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1b activin A receptor type 1B involved_in ISO (PMID:9884026) BHF-UCL PMID:9884026 NCBI chrNW_004955547:2,311,573...2,366,106
Ensembl chrNW_004955547:2,323,771...2,367,263
JBrowse link
G Bad BCL2 associated agonist of cell death involved_in ISO (PMID:18852119) UniProt PMID:18852119 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (PMID:15214043) BHF-UCL PMID:15214043 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bid BH3 interacting domain death agonist ISO (MGI:1343652|PMID:10476969) MGI PMID:10476969 MGI:1343652 NCBI chrNW_004955454:5,776,656...5,785,500 JBrowse link
G Casp8 caspase 8 involved_in ISO (MGI:5521568|PMID:22089168)
(PMID:21785459)
(MGI:6401035|PMID:31748744)
(MGI:2386520|PMID:12065591), (MGI:3687663|PMID:10588860)
(MGI:5486419|PMID:22675671)
MGI
UniProt
PMID:10588860 PMID:12065591 PMID:21785459 PMID:22089168 PMID:22675671 PMID:31748744 MGI:2386520 MGI:3687663 MGI:5486419 MGI:5521568 MGI:6401035 NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053
JBrowse link
G Cd27 CD27 molecule involved_in ISO (PMID:9177220) BHF-UCL PMID:9177220 NCBI chrNW_004955413:4,102,740...4,107,739 JBrowse link
G Fadd Fas associated via death domain involved_in ISO (MGI:3687663|PMID:10588860)
(PMID:16611992)
(PMID:21785459)
(MGI:3603971|PMID:16183742)
MGI
UniProt
PMID:10588860 PMID:16183742 PMID:16611992 PMID:21785459 MGI:3603971 MGI:3687663 NCBI chrNW_004955422:16,026,323...16,035,808
Ensembl chrNW_004955422:16,031,280...16,036,281
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (MGI:2183141|PMID:12011074)
(PMID:22891283)
(MGI:3818355|PMID:17980593)
MGI
UniProt
PMID:12011074 PMID:17980593 PMID:22891283 MGI:2183141 MGI:3818355 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Faslg Fas ligand involved_in ISO (PMID:22891283) UniProt PMID:22891283 NCBI chrNW_004955406:13,098,479...13,107,045
Ensembl chrNW_004955406:13,098,662...13,107,389
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha ISO (MGI:4818524|PMID:20371704) ARUK-UCL PMID:20371704 MGI:4818524 NCBI chrNW_004955555:668,641...676,351
Ensembl chrNW_004955555:667,973...676,351
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO (MGI:4818524|PMID:20371704) ARUK-UCL PMID:20371704 MGI:4818524 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in ISO (PMID:15701637) UniProt PMID:15701637 NCBI chrNW_004955435:17,201,866...17,257,371
Ensembl chrNW_004955435:17,172,651...17,257,371
JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:16942485) BHF-UCL PMID:16942485 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:16942485) BHF-UCL PMID:16942485 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il33 interleukin 33 ISO (MGI:5437589|PMID:22660580) MGI PMID:22660580 MGI:5437589 NCBI chrNW_004955434:10,145,449...10,187,595
Ensembl chrNW_004955434:10,171,812...10,188,948
JBrowse link
G Inhba inhibin subunit beta A involved_in ISO (PMID:9884026) BHF-UCL PMID:9884026 NCBI chrNW_004955460:2,054,879...2,066,628
Ensembl chrNW_004955460:2,046,588...2,066,609
JBrowse link
G Jak2 Janus kinase 2 ISO (MGI:5009182|PMID:12426001) MGI PMID:12426001 MGI:5009182 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208
JBrowse link
G Krt18 keratin 18 ISO (MGI:3711847|PMID:10747083) MGI PMID:10747083 MGI:3711847 NCBI chrNW_004955458:227,017...230,752
Ensembl chrNW_004955458:226,805...232,728
JBrowse link
G Krt8 keratin 8 ISO (MGI:3711847|PMID:10747083) MGI PMID:10747083 MGI:3711847 NCBI chrNW_004955458:178,954...190,310 JBrowse link
G Mllt11 MLLT11 transcription factor 7 cofactor involved_in ISO (PMID:18852119) UniProt PMID:18852119 NCBI chrNW_004955588:427,102...438,578 JBrowse link
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 ISO (MGI:1930995|PMID:10924506) MGI PMID:10924506 MGI:1930995 NCBI chrNW_004955524:2,426,604...2,433,682
Ensembl chrNW_004955524:2,426,604...2,433,679
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO PMID:12857854
(MGI:3700102|PMID:17286969)
PMID:8614837
BHF-UCL
MGI
PMID:8614837 PMID:12857854 PMID:17286969 MGI:3700102 RGD:69918 RGD:8554350 NCBI chrNW_004955482:7,048,674...7,087,525
Ensembl chrNW_004955482:7,048,776...7,086,926
JBrowse link
G Parp2 poly(ADP-ribose) polymerase 2 ISO (MGI:2386520|PMID:12065591) MGI PMID:12065591 MGI:2386520 NCBI chrNW_004955550:1,138,976...1,152,293
Ensembl chrNW_004955550:1,140,460...1,151,491
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in ISO (PMID:16207722) UniProt PMID:16207722 NCBI chrNW_004955442:14,685,089...14,772,870
Ensembl chrNW_004955442:14,685,153...14,772,870
JBrowse link
G Pidd1 p53-induced death domain protein 1 ISO (MGI:3603971|PMID:16183742) MGI PMID:16183742 MGI:3603971 NCBI chrNW_004955476:11,325,877...11,331,447
Ensembl chrNW_004955476:11,326,626...11,331,360
JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:1306978|PMID:9806545) MGI PMID:9806545 MGI:1306978 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in ISO (PMID:7538908)
(PMID:10521396), (PMID:8612133)
BHF-UCL PMID:7538908 PMID:8612133 PMID:10521396 NCBI chrNW_004955465:10,127,907...10,167,895
Ensembl chrNW_004955465:10,128,931...10,168,399
JBrowse link
G Rnf41 ring finger protein 41 involved_in ISO (PMID:14765125) UniProt PMID:14765125 NCBI chrNW_004955458:3,799,450...3,833,269
Ensembl chrNW_004955458:3,799,450...3,833,263
JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 ISO (MGI:2386810|PMID:12235122) MGI PMID:12235122 MGI:2386810 NCBI chrNW_004955466:6,075,507...6,103,739 JBrowse link
G Siva1 SIVA1 apoptosis inducing factor involved_in ISO (PMID:9177220) BHF-UCL PMID:9177220 NCBI chrNW_004955538:3,197,983...3,202,782 JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:15334054) BHF-UCL PMID:15334054 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:15334054) BHF-UCL PMID:15334054 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (PMID:17217916) BHF-UCL PMID:17217916 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
JBrowse link
G Tlr3 toll like receptor 3 involved_in ISO (PMID:21737330) UniProt PMID:21737330 NCBI chrNW_004955403:22,977,882...23,001,392
Ensembl chrNW_004955403:22,979,120...23,001,467
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (MGI:5521568|PMID:22089168)
(PMID:11577081), (PMID:16611992)
(MGI:5510543|PMID:19498109)
MGI
UniProt
PMID:11577081 PMID:16611992 PMID:19498109 PMID:22089168 MGI:5510543 MGI:5521568 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Tnfrsf12a TNF receptor superfamily member 12A ISO (MGI:2667292|PMID:12821115) MGI PMID:12821115 MGI:2667292 NCBI chrNW_004955442:14,320,159...14,322,146
Ensembl chrNW_004955442:14,320,159...14,322,146
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO (MGI:69721|PMID:7990930) MGI PMID:7990930 MGI:69721 NCBI chrNW_004955486:1,790,531...1,817,986
Ensembl chrNW_004955486:1,792,115...1,818,362
JBrowse link
G Tradd TNFRSF1A associated via death domain involved_in ISO (MGI:5521568|PMID:22089168)
(PMID:16611992)
MGI
UniProt
PMID:16611992 PMID:22089168 MGI:5521568 NCBI chrNW_004955484:9,456,268...9,462,425
Ensembl chrNW_004955484:9,456,301...9,462,425
JBrowse link
G Wwox WW domain containing oxidoreductase ISO (MGI:3851310|PMID:19366691) MGI PMID:19366691 MGI:3851310 NCBI chrNW_004955522:1,265,732...2,185,372
Ensembl chrNW_004955522:1,265,404...2,184,562
JBrowse link
G Znf274 zinc finger protein 274 ISO (MGI:1929440|PMID:10545116) MGI PMID:10545116 MGI:1929440 NCBI chrNW_004955584:922,807...943,352 JBrowse link
extrinsic apoptotic signaling pathway in absence of ligand term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2 associated agonist of cell death ISO (MGI:3029504|PMID:12431371)
(MGI:3032484|PMID:14967141)
(MGI:2183839|PMID:12115603), (MGI:2675215|PMID:12944463)
MGI PMID:12115603 PMID:12431371 PMID:12944463 PMID:14967141 MGI:2183839 MGI:2675215 MGI:3029504 MGI:3032484 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bag3 BAG cochaperone 3 ISO (MGI:3513163|PMID:11527400) MGI PMID:11527400 MGI:3513163 NCBI chrNW_004955551:446,322...468,329
Ensembl chrNW_004955551:446,605...469,207
JBrowse link
G Bak1 BCL2 antagonist/killer 1 ISO (MGI:3575206|PMID:15680329)
(MGI:3581932|PMID:15967824)
MGI PMID:15680329 PMID:15967824 MGI:3575206 MGI:3581932 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:3575206|PMID:15680329)
(MGI:3581932|PMID:15967824)
MGI PMID:15680329 PMID:15967824 MGI:3575206 MGI:3581932 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:2179928|PMID:12082633) MGI PMID:12082633 MGI:2179928 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Bcl2l1 BCL2 like 1 ISO (MGI:2183839|PMID:12115603) MGI PMID:12115603 MGI:2183839 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
G Bcl2l11 BCL2 like 11 ISO (MGI:3581932|PMID:15967824) MGI PMID:15967824 MGI:3581932 NCBI chrNW_004955470:2,740,682...2,780,225 JBrowse link
G Casp2 caspase 2 ISO (MGI:3691999|PMID:11536012) MGI PMID:11536012 MGI:3691999 NCBI chrNW_004955494:353,572...369,207
Ensembl chrNW_004955494:353,310...368,873
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 involved_in ISO (PMID:17701904) BHF-UCL PMID:17701904 NCBI chrNW_004955458:3,683,126...3,701,752
Ensembl chrNW_004955458:3,683,126...3,702,978
JBrowse link
G Eya2 EYA transcriptional coactivator and phosphatase 2 ISO (MGI:2158099|PMID:11700312) MGI PMID:11700312 MGI:2158099 NCBI chrNW_004955445:10,368,869...10,520,246
Ensembl chrNW_004955445:10,369,514...10,603,953
JBrowse link
G Fadd Fas associated via death domain ISO (MGI:2675560|PMID:13679421) MGI PMID:13679421 MGI:2675560 NCBI chrNW_004955422:16,026,323...16,035,808
Ensembl chrNW_004955422:16,031,280...16,036,281
JBrowse link
G Fas Fas cell surface death receptor ISO (MGI:2675560|PMID:13679421) MGI PMID:13679421 MGI:2675560 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Foxo3 forkhead box O3 ISO (MGI:3029504|PMID:12431371) MGI PMID:12431371 MGI:3029504 NCBI chrNW_004955411:33,655,958...33,770,829
Ensembl chrNW_004955411:33,655,958...33,770,829
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha ISO (MGI:5514334|PMID:16543145) UniProt PMID:16543145 MGI:5514334 NCBI chrNW_004955555:668,641...676,351
Ensembl chrNW_004955555:667,973...676,351
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO (MGI:5514334|PMID:16543145) UniProt PMID:16543145 MGI:5514334 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Igf1 insulin like growth factor 1 ISO (MGI:3029504|PMID:12431371) MGI PMID:12431371 MGI:3029504 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152
JBrowse link
G Il1a interleukin 1 alpha ISO (MGI:3691999|PMID:11536012) MGI PMID:11536012 MGI:3691999 NCBI chrNW_004955470:1,527,710...1,538,418
Ensembl chrNW_004955470:1,527,674...1,538,466
JBrowse link
G Il1b interleukin 1 beta ISO (MGI:3691999|PMID:11536012) MGI PMID:11536012 MGI:3691999 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947
JBrowse link
G Il2 interleukin 2 ISO (MGI:2179928|PMID:12082633) MGI PMID:12082633 MGI:2179928 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265
JBrowse link
G Il4 interleukin 4 ISO (MGI:2183839|PMID:12115603) MGI PMID:12115603 MGI:2183839 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Itgav integrin subunit alpha V ISO (MGI:3530680|PMID:15591537) BHF-UCL PMID:15591537 MGI:3530680 NCBI chrNW_004955403:11,588,536...11,669,809
Ensembl chrNW_004955403:11,592,339...11,659,297
JBrowse link
G Itm2b integral membrane protein 2B ISO (MGI:2179928|PMID:12082633) MGI PMID:12082633 MGI:2179928 NCBI chrNW_004955431:1,928,706...1,935,010
Ensembl chrNW_004955431:1,928,706...1,937,238
JBrowse link
G Kitlg KIT ligand ISO (MGI:3038547|PMID:15039234) MGI PMID:15039234 MGI:3038547 NCBI chrNW_004955405:25,816,137...25,969,006
Ensembl chrNW_004955405:25,886,447...25,969,395
JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member involved_in ISO (MGI:5514334|PMID:16543145)
(PMID:16543145)
UniProt PMID:16543145 MGI:5514334 NCBI chrNW_004955413:238,043...243,317 JBrowse link
G Mknk1 MAPK interacting serine/threonine kinase 1 ISO (MGI:3793518|PMID:17903173) MGI PMID:17903173 MGI:3793518 NCBI chrNW_004955464:11,697,946...11,750,258
Ensembl chrNW_004955464:11,707,614...11,750,562
JBrowse link
G Mknk2 MAPK interacting serine/threonine kinase 2 ISO (MGI:3793518|PMID:17903173) MGI PMID:17903173 MGI:3793518 NCBI chrNW_004955495:6,048,346...6,061,579
Ensembl chrNW_004955495:6,048,128...6,062,913
JBrowse link
G Ngf nerve growth factor ISO (MGI:2681362|PMID:14623868) MGI PMID:14623868 MGI:2681362 NCBI chrNW_004955435:18,581,889...18,633,330
Ensembl chrNW_004955435:18,581,808...18,601,059
JBrowse link
extrinsic apoptotic signaling pathway via death domain receptors term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2 associated agonist of cell death ISO (MGI:3029504|PMID:12431371) MGI PMID:12431371 MGI:3029504 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bag3 BAG cochaperone 3 involved_in ISO (PMID:10597216) MGI PMID:10597216 NCBI chrNW_004955551:446,322...468,329
Ensembl chrNW_004955551:446,605...469,207
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:1349210|PMID:10597216) MGI PMID:10597216 MGI:1349210 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bcl2 BCL2 apoptosis regulator involved_in ISO (PMID:10597216) MGI PMID:10597216 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Bex3 brain expressed X-linked 3 ISO (MGI:1859527|PMID:10764727) MGI PMID:10764727 MGI:1859527 NCBI chrNW_004955548:526,844...528,406
Ensembl chrNW_004955548:526,549...529,753
JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex 1 subunit 2 involved_in ISO (PMID:18188704) UniProt PMID:18188704 NCBI chrNW_004955507:6,138,511...6,144,823
Ensembl chrNW_004955507:6,138,071...6,144,823
JBrowse link
G Casp8 caspase 8 ISO (MGI:3054336|PMID:15322156) MGI PMID:15322156 MGI:3054336 NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053
JBrowse link
G Casp8ap2 caspase 8 associated protein 2 involved_in ISO (MGI:1347587|PMID:10235259)
(PMID:17245429)
MGI
UniProt
PMID:10235259 PMID:17245429 MGI:1347587 NCBI chrNW_004955411:16,535,646...16,568,139 JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (PMID:19903888) BHF-UCL PMID:19903888 NCBI chrNW_004955419:6,229,437...6,416,619
Ensembl chrNW_004955419:6,228,591...6,416,402
JBrowse link
G Dapk1 death associated protein kinase 1 ISO (MGI:3051747|PMID:15010850)
(MGI:4431305|PMID:20053891)
MGI PMID:15010850 PMID:20053891 MGI:3051747 MGI:4431305 NCBI chrNW_004955432:29,925...254,327
Ensembl chrNW_004955432:29,197...254,379
JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:18846110) UniProt PMID:18846110 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Ddx47 DEAD-box helicase 47 involved_in ISO (PMID:15977068) UniProt PMID:15977068 NCBI chrNW_004955413:9,703,777...9,718,802
Ensembl chrNW_004955413:9,703,777...9,718,796
JBrowse link
G Dedd death effector domain containing ISO (MGI:1306907|PMID:9774341) MGI PMID:9774341 MGI:1306907 NCBI chrNW_004955468:12,885,547...12,897,522
Ensembl chrNW_004955468:12,885,553...12,897,164
JBrowse link
G Dedd2 death effector domain containing 2 involved_in ISO (PMID:11741985) UniProt PMID:11741985 NCBI chrNW_004955555:684,523...701,915
Ensembl chrNW_004955555:684,523...701,915
JBrowse link
G Dele1 DAP3 binding cell death enhancer 1 involved_in ISO (PMID:20563667) UniProt PMID:20563667 NCBI chrNW_004955415:11,851,023...11,869,905
Ensembl chrNW_004955415:11,854,526...11,869,777
JBrowse link
G Fas Fas cell surface death receptor ISO (MGI:1340173|PMID:10429671)
(MGI:2687085|PMID:12801066), (MGI:3038547|PMID:15039234), (MGI:3576402|PMID:15632112), (MGI:3687663|PMID:10588860), (MGI:3819026|PMID:18363966), (MGI:5009197|PMID:10950869), (MGI:77677|PMID:8524870)
(MGI:3029504|PMID:12431371)
(MGI:2687085|PMID:12801066), (MGI:3029504|PMID:12431371), (MGI:77677|PMID:8524870)
MGI PMID:8524870 PMID:10429671 PMID:10588860 PMID:10950869 PMID:12431371 PMID:12801066 PMID:15039234 PMID:15632112 PMID:18363966 MGI:1340173 MGI:2687085 MGI:3029504 MGI:3038547 MGI:3576402 MGI:3687663 MGI:3819026 MGI:5009197 MGI:77677 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Faslg Fas ligand involved_in ISO (PMID:18835034), (PMID:26582200)
(MGI:3038547|PMID:15039234), (MGI:3687663|PMID:10588860)
RGD
BHF-UCL
MGI
PMID:10588860 PMID:15039234 PMID:16689665 PMID:18835034 PMID:26582200 MGI:3038547 MGI:3687663 RGD:1582444 NCBI chrNW_004955406:13,098,479...13,107,045
Ensembl chrNW_004955406:13,098,662...13,107,389
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in ISO (PMID:15977068) UniProt PMID:15977068 NCBI chrNW_004955467:9,667,938...9,670,067
Ensembl chrNW_004955467:9,667,941...9,670,067
JBrowse link
G Il18 interleukin 18 involved_in ISO (PMID:11429161)
(PMID:11131641)
UniProt PMID:11131641 PMID:11429161 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634
JBrowse link
G Nf1 neurofibromin 1 ISO (MGI:3038547|PMID:15039234) MGI PMID:15039234 MGI:3038547 NCBI chrNW_004955481:6,145,855...6,404,179
Ensembl chrNW_004955481:6,145,855...6,404,179
JBrowse link
G Ngf nerve growth factor involved_in ISO (PMID:14985763) BHF-UCL PMID:14985763 NCBI chrNW_004955435:18,581,889...18,633,330
Ensembl chrNW_004955435:18,581,808...18,601,059
JBrowse link
G Pidd1 p53-induced death domain protein 1 ISO (MGI:3603971|PMID:16183742) MGI PMID:16183742 MGI:3603971 NCBI chrNW_004955476:11,325,877...11,331,447
Ensembl chrNW_004955476:11,326,626...11,331,360
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO (MGI:3038547|PMID:15039234) MGI PMID:15039234 MGI:3038547 NCBI chrNW_004955446:1,020,707...1,098,327
Ensembl chrNW_004955446:1,020,043...1,098,820
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 ISO (MGI:3612236|PMID:16365167) MGI PMID:16365167 MGI:3612236 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401
JBrowse link
G Sort1 sortilin 1 involved_in ISO (PMID:14985763) BHF-UCL PMID:14985763 NCBI chrNW_004955435:12,725,952...12,819,280
Ensembl chrNW_004955435:12,730,270...12,819,029
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (MGI:4420852|PMID:20080598)
(PMID:10521396), (PMID:18202225), (PMID:18676776)
(MGI:3029504|PMID:12431371)
MGI
BHF-UCL
PMID:10521396 PMID:12431371 PMID:18202225 PMID:18676776 PMID:20080598 MGI:3029504 MGI:4420852 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
fibroblast apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2 antagonist/killer 1 ISO (MGI:3689797|PMID:15901672) MGI PMID:15901672 MGI:3689797 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bcl10 BCL10 immune signaling adaptor NOT ISO (MGI:1930354|PMID:11163238) MGI PMID:11163238 MGI:1930354 NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050
JBrowse link
G Cul3 cullin 3 ISO (MGI:3713609|PMID:17339333) MGI PMID:17339333 MGI:3713609 NCBI chrNW_004955453:9,546,554...9,629,976
Ensembl chrNW_004955453:9,564,522...9,629,976
JBrowse link
fibroblast growth factor receptor apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr3 fibroblast growth factor receptor 3 involved_in ISO (PMID:17561467) UniProt PMID:17561467 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590
JBrowse link
fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 ISO (MGI:4887304|PMID:20345253) UniProt PMID:20345253 MGI:4887304 NCBI chrNW_004955551:2,321,190...2,427,000 JBrowse link
glial cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator ISO microglia RGD PMID:18931364 RGD:2313998 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO microglia RGD PMID:18931364 RGD:2313998 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Bid BH3 interacting domain death agonist ISO microglia RGD PMID:18931364 RGD:2313998 NCBI chrNW_004955454:5,776,656...5,785,500 JBrowse link
G Casp3 caspase 3 ISO microglia
(MGI:2150278|PMID:11549719)
RGD
MGI
PMID:11549719 PMID:18931364 MGI:2150278 RGD:2313998 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Casp9 caspase 9 ISO microglia RGD PMID:18931364 RGD:2313998 NCBI chrNW_004955527:2,613,691...2,630,217
Ensembl chrNW_004955527:2,613,683...2,629,738
JBrowse link
G LOC102023786 cytochrome c, somatic ISO microglia RGD PMID:18931364 RGD:2313998 NCBI chrNW_004955410:27,086,405...27,089,255
Ensembl chrNW_004955410:27,086,405...27,089,255
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO RGD PMID:14997384 RGD:10412686 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784
JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO (MGI:2150278|PMID:11549719) MGI PMID:11549719 MGI:2150278 NCBI chrNW_004955431:1,960,765...2,124,576
Ensembl chrNW_004955431:1,960,661...2,124,576
JBrowse link
glomerular visceral epithelial cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO RGD PMID:23515840 RGD:8693403 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239
JBrowse link
granzyme-mediated apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube4b ubiquitination factor E4B involved_in ISO (PMID:11802788) UniProt PMID:11802788 NCBI chrNW_004955486:3,518,873...3,626,036
Ensembl chrNW_004955486:3,518,740...3,626,121
JBrowse link
granzyme-mediated programmed cell death signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:9396766) GO_Central PMID:9396766 NCBI chrNW_004955477:9,621,812...9,630,406
Ensembl chrNW_004955477:9,621,812...9,638,099
JBrowse link
G Gsdme gasdermin E involved_in ISO (PMID:31953257), (PMID:32188940) UniProt PMID:31953257 PMID:32188940 NCBI chrNW_004955410:26,700,977...26,761,683
Ensembl chrNW_004955410:26,701,893...26,769,989
JBrowse link
G Gzma granzyme A involved_in ISO (PMID:32299851) UniProt PMID:32299851 NCBI chrNW_004955446:12,560,831...12,568,023
Ensembl chrNW_004955446:12,560,658...12,568,053
JBrowse link
G Lamp1 lysosomal associated membrane protein 1 involved_in ISO (PMID:23632890) GO_Central PMID:23632890 NCBI chrNW_004955404:557,090...573,532
Ensembl chrNW_004955404:557,862...573,379
JBrowse link
G Srgn serglycin involved_in ISO (PMID:11911826) GO_Central PMID:11911826 NCBI chrNW_004955437:21,954,837...21,966,552
Ensembl chrNW_004955437:21,951,732...21,965,581
JBrowse link
hepatocyte apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf6 ADP ribosylation factor 6 ISO (MGI:3653957|PMID:16880525) MGI PMID:16880525 MGI:3653957 NCBI chrNW_004955409:12,814,814...12,818,142
Ensembl chrNW_004955409:12,817,496...12,818,023
JBrowse link
G Bcl2l1 BCL2 like 1 ISO (MGI:1351384|PMID:10618441) MGI PMID:10618441 MGI:1351384 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
G Bid BH3 interacting domain death agonist ISO (MGI:5566519|PMID:20436477) MGI PMID:20436477 MGI:5566519 NCBI chrNW_004955454:5,776,656...5,785,500 JBrowse link
G Casp8 caspase 8 ISO (MGI:3054336|PMID:15322156) MGI PMID:15322156 MGI:3054336 NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:19833194 RGD:9588622 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059
JBrowse link
G Fas Fas cell surface death receptor ISO (MGI:5566519|PMID:20436477) MGI PMID:20436477 MGI:5566519 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:28638224 RGD:13792732 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Gsn gelsolin involved_in ISO (PMID:22952982) UniProt PMID:22952982 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361
JBrowse link
G Krt18 keratin 18 ISO (MGI:3711847|PMID:10747083) MGI PMID:10747083 MGI:3711847 NCBI chrNW_004955458:227,017...230,752
Ensembl chrNW_004955458:226,805...232,728
JBrowse link
G Krt8 keratin 8 ISO (MGI:3711847|PMID:10747083) MGI PMID:10747083 MGI:3711847 NCBI chrNW_004955458:178,954...190,310 JBrowse link
G Mtch2 mitochondrial carrier 2 ISO (MGI:5566519|PMID:20436477) MGI PMID:20436477 MGI:5566519 NCBI chrNW_004955422:672,301...690,989
Ensembl chrNW_004955422:672,301...690,989
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma ISO RGD PMID:20675006 RGD:6482714 NCBI chrNW_004955410:11,402,476...11,433,335
Ensembl chrNW_004955410:11,402,520...11,437,422
JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO (MGI:2150278|PMID:11549719) MGI PMID:11549719 MGI:2150278 NCBI chrNW_004955431:1,960,765...2,124,576
Ensembl chrNW_004955431:1,960,661...2,124,576
JBrowse link
G Stk3 serine/threonine kinase 3 ISO (MGI:4420852|PMID:20080598) MGI PMID:20080598 MGI:4420852 NCBI chrNW_004955417:14,098,851...14,381,553
Ensembl chrNW_004955417:14,095,694...14,381,607
JBrowse link
G Stk4 serine/threonine kinase 4 ISO (MGI:4420852|PMID:20080598) MGI PMID:20080598 MGI:4420852 NCBI chrNW_004955445:12,308,285...12,399,012
Ensembl chrNW_004955445:12,308,285...12,399,012
JBrowse link
hippocampal neuron apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2b calcium/calmodulin dependent protein kinase II beta ISO RGD PMID:25126162 RGD:13681928 NCBI chrNW_004955456:7,711,583...7,760,506
Ensembl chrNW_004955456:7,713,552...7,760,207
JBrowse link
hormone-mediated apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crh corticotropin releasing hormone ISO RGD PMID:11790788 RGD:1358682 NCBI chrNW_004955444:12,989,210...12,991,300 JBrowse link
G Esr2 estrogen receptor 2 ISO (MGI:3047056|PMID:15187231) MGI PMID:15187231 MGI:3047056 NCBI chrNW_004955466:5,587,003...5,644,765
Ensembl chrNW_004955466:5,575,088...5,638,946
JBrowse link
G Mettl21c methyltransferase like 21C ISO (MGI:5781029|PMID:24677265) MGI PMID:24677265 MGI:5781029 NCBI chrNW_004955404:8,447,359...8,460,853
Ensembl chrNW_004955404:8,447,359...8,460,847
JBrowse link
induction by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:5544501|PMID:24310610) UniProt PMID:24310610 MGI:5544501 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965
JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:32276428) UniProt PMID:32276428 NCBI chrNW_004955413:4,557,969...4,563,697
Ensembl chrNW_004955413:4,558,259...4,563,582
JBrowse link
induction of programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:19787053) ARUK-UCL PMID:19787053 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444
JBrowse link
inflammatory cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fas Fas cell surface death receptor ISO (MGI:2687085|PMID:12801066) MGI PMID:12801066 MGI:2687085 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Faslg Fas ligand ISO RGD PMID:16154149 RGD:1582433 NCBI chrNW_004955406:13,098,479...13,107,045
Ensembl chrNW_004955406:13,098,662...13,107,389
JBrowse link
G Ifng interferon gamma ISO (MGI:3027059|PMID:11457893) MGI PMID:11457893 MGI:3027059 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO (MGI:2178865|PMID:11923874) MGI PMID:11923874 MGI:2178865 NCBI chrNW_004955537:82,724...134,609
Ensembl chrNW_004955537:81,920...134,609
JBrowse link
inhibition of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l12 BCL2 like 12 involved_in ISO (PMID:22262180) UniProt PMID:22262180 NCBI chrNW_004955559:1,217,797...1,224,875
Ensembl chrNW_004955559:1,217,809...1,224,875
JBrowse link
G Fcmr Fc fragment of IgM receptor ISO (MGI:3576402|PMID:15632112) MGI PMID:15632112 MGI:3576402 NCBI chrNW_004955406:42,438,173...42,452,339
Ensembl chrNW_004955406:42,438,783...42,452,163
JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO (PMID:15509781) UniProt PMID:15509781 NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095
JBrowse link
G Xiap X-linked inhibitor of apoptosis ISO (MGI:2681362|PMID:14623868) MGI PMID:14623868 MGI:2681362 NCBI chrNW_004955473:10,823,795...10,878,256
Ensembl chrNW_004955473:10,827,435...10,840,604
JBrowse link
intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apopt1 apoptogenic 1, mitochondrial ISO (MGI:3694393|PMID:16782708) MGI PMID:16782708 MGI:3694393 NCBI chrNW_004955538:2,415,781...2,432,742
Ensembl chrNW_004955538:2,415,604...2,434,658
JBrowse link
G Bad BCL2 associated agonist of cell death involved_in ISO (PMID:18676776) UniProt PMID:18676776 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (PMID:16462759), (PMID:9219694) BHF-UCL PMID:9219694 PMID:16462759 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO (MGI:3696331|PMID:16954213) MGI PMID:16954213 MGI:3696331 NCBI chrNW_004955477:9,621,812...9,630,406
Ensembl chrNW_004955477:9,621,812...9,638,099
JBrowse link
G Clu clusterin involved_in ISO (PMID:21567405) UniProt PMID:21567405 NCBI chrNW_004955403:50,160,598...50,175,876
Ensembl chrNW_004955403:50,160,598...50,175,876
JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:16301996) UniProt PMID:16301996 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO (MGI:3696331|PMID:16954213) MGI PMID:16954213 MGI:3696331 NCBI chrNW_004955476:11,508,446...11,510,333
Ensembl chrNW_004955476:11,508,126...11,510,333
JBrowse link
G Htra2 HtrA serine peptidase 2 ISO (MGI:3511636|PMID:15509788) MGI PMID:15509788 MGI:3511636 NCBI chrNW_004955424:11,255,756...11,259,170
Ensembl chrNW_004955424:11,255,756...11,259,170
JBrowse link
G Lgals12 galectin 12 involved_in ISO (PMID:11435439) MGI PMID:11435439 NCBI chrNW_004955599:248,058...261,697
Ensembl chrNW_004955599:249,317...257,567
JBrowse link
G Mllt11 MLLT11 transcription factor 7 cofactor involved_in ISO (PMID:18852119) UniProt PMID:18852119 NCBI chrNW_004955588:427,102...438,578 JBrowse link
G Msh6 mutS homolog 6 ISO (MGI:2677657|PMID:14632208) MGI PMID:14632208 MGI:2677657 NCBI chrNW_004955441:14,451,207...14,471,316
Ensembl chrNW_004955441:14,451,307...14,471,227
JBrowse link
G Nbn nibrin ISO (MGI:3805397|PMID:18614044) MGI PMID:18614044 MGI:3805397 NCBI chrNW_004955417:6,840,916...6,880,479
Ensembl chrNW_004955417:6,839,312...6,880,133
JBrowse link
G Nol3 nucleolar protein 3 ISO (MGI:5573029|PMID:24312627) UniProt PMID:24312627 MGI:5573029 NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095
JBrowse link
G Plscr1 phospholipid scramblase 1 ISO (MGI:5315351|PMID:15863367) UniProt PMID:15863367 MGI:5315351 NCBI chrNW_004955474:10,953,381...10,989,100 JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:14500711) UniProt PMID:14500711 NCBI chrNW_004955402:44,005,517...44,010,722 JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent 1F involved_in ISO (PMID:11559703) UniProt PMID:11559703 NCBI chrNW_004955442:17,233,258...17,256,009
Ensembl chrNW_004955442:17,227,723...17,252,383
JBrowse link
G Prkca protein kinase C alpha ISO (MGI:2671671|PMID:12928424) MGI PMID:12928424 MGI:2671671 NCBI chrNW_004955478:5,686,639...6,090,356
Ensembl chrNW_004955478:5,686,640...6,083,967
JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 ISO (MGI:1932564|PMID:10859351) MGI PMID:10859351 MGI:1932564 NCBI chrNW_004955466:6,075,507...6,103,739 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:23313858) AgBase PMID:23313858 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Siva1 SIVA1 apoptosis inducing factor NOT|involved_in ISO (PMID:12011449) BHF-UCL PMID:12011449 NCBI chrNW_004955538:3,197,983...3,202,782 JBrowse link
intrinsic apoptotic signaling pathway by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:1344924|PMID:10479688) MGI PMID:10479688 MGI:1344924 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bok BCL2 family apoptosis regulator BOK involved_in ISO (PMID:15102863) UniProt PMID:15102863 NCBI chrNW_004955542:224,471...232,401
Ensembl chrNW_004955542:224,471...232,428
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:15660129) UniProt PMID:15660129 NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358
JBrowse link
G E2f1 E2F transcription factor 1 ISO (MGI:1927703|PMID:11095619) MGI PMID:11095619 MGI:1927703 NCBI chrNW_004955422:27,638,625...27,643,261
Ensembl chrNW_004955422:27,633,827...27,642,241
JBrowse link
G E2f2 E2F transcription factor 2 ISO (MGI:1927703|PMID:11095619) MGI PMID:11095619 MGI:1927703 NCBI chrNW_004955452:3,498,077...3,518,033
Ensembl chrNW_004955452:3,494,919...3,518,487
JBrowse link
G Eda2r ectodysplasin A2 receptor ISO (MGI:4454200|PMID:20434500) MGI PMID:20434500 MGI:4454200 NCBI chrNW_004955475:6,080,153...6,143,339
Ensembl chrNW_004955475:6,087,687...6,143,432
JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase involved_in ISO (PMID:15313915) UniProt PMID:15313915 NCBI chrNW_004955430:221,518...508,094 JBrowse link
G Hint1 histidine triad nucleotide binding protein 1 involved_in ISO (PMID:16835243) UniProt PMID:16835243 NCBI chrNW_004955408:2,673,950...2,678,528
Ensembl chrNW_004955408:2,674,109...2,678,528
JBrowse link
G Ifi16 interferon gamma inducible protein 16 involved_in ISO (PMID:21573174) UniProt PMID:21573174 NCBI chrNW_004955468:10,828,726...10,845,853 JBrowse link
G Jmy junction mediating and regulatory protein, p53 cofactor ISO (MGI:1891484|PMID:10518217) MGI PMID:10518217 MGI:1891484 NCBI chrNW_004955425:21,800,113...21,902,889
Ensembl chrNW_004955425:21,800,113...21,902,889
JBrowse link
G Mybbp1a MYB binding protein 1a involved_in ISO (PMID:21471221) UniProt PMID:21471221 NCBI chrNW_004955467:12,390,371...12,405,055
Ensembl chrNW_004955467:12,390,037...12,404,971
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO (PMID:22123926) UniProt PMID:22123926 NCBI chrNW_004955451:11,547,660...11,559,266
Ensembl chrNW_004955451:11,547,660...11,559,403
JBrowse link
G Perp p53 apoptosis effector related to PMP22 ISO (MGI:1929912|PMID:10733530) MGI PMID:10733530 MGI:1929912 NCBI chrNW_004955436:21,425,321...21,430,780
Ensembl chrNW_004955436:21,417,332...21,431,312
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (MGI:2679929|PMID:14500851)
(PMID:15102863)
UniProt PMID:14500851 PMID:15102863 MGI:2679929 NCBI chrNW_004955402:44,005,517...44,010,722 JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:3034149|PMID:14992722) MGI PMID:14992722 MGI:3034149 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Pou4f1 POU class 4 homeobox 1 ISO (MGI:5825431|PMID:17145718) UniProt PMID:17145718 MGI:5825431 NCBI chrNW_004955404:28,812,762...28,818,024 JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:5825431|PMID:17145718) UniProt PMID:17145718 MGI:5825431 NCBI chrNW_004955428:2,325,775...2,329,122
Ensembl chrNW_004955428:2,324,834...2,329,205
JBrowse link
G Ppp1r13b protein phosphatase 1 regulatory subunit 13B involved_in ISO (PMID:11684014) UniProt PMID:11684014 NCBI chrNW_004955538:2,519,765...2,594,769
Ensembl chrNW_004955538:2,519,765...2,594,754
JBrowse link
G Rrp8 ribosomal RNA processing 8 involved_in ISO (PMID:21471221) UniProt PMID:21471221 NCBI chrNW_004955414:22,311,038...22,316,144
Ensembl chrNW_004955414:22,311,038...22,316,144
JBrowse link
G Shisa5 shisa family member 5 ISO (MGI:2183272|PMID:12135983) MGI PMID:12135983 MGI:2183272 NCBI chrNW_004955532:535,992...544,542 JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (PMID:11430832) UniProt PMID:11430832 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (MGI:4454200|PMID:20434500)
(PMID:12172011), (PMID:16322561), (PMID:17310983)
(MGI:2183272|PMID:12135983), (MGI:3589512|PMID:16107883), (MGI:5883206|PMID:22262176)
MGI
BHF-UCL
CAFA
PMID:12135983 PMID:12172011 PMID:16107883 PMID:16322561 PMID:17310983 PMID:20434500 PMID:22262176 MGI:2183272 MGI:3589512 MGI:4454200 MGI:5883206 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Tp53bp2 tumor protein p53 binding protein 2 involved_in ISO (PMID:11684014) UniProt PMID:11684014 NCBI chrNW_004955520:1,254,853...1,285,118
Ensembl chrNW_004955520:1,257,216...1,285,322
JBrowse link
G Wwox WW domain containing oxidoreductase ISO (MGI:1930321|PMID:11058590) MGI PMID:11058590 MGI:1930321 NCBI chrNW_004955522:1,265,732...2,185,372
Ensembl chrNW_004955522:1,265,404...2,184,562
JBrowse link
G Znf385b zinc finger protein 385B involved_in ISO (PMID:22945289) UniProt PMID:22945289 NCBI chrNW_004955403:17,196,597...17,583,050 JBrowse link
intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family AAA domain containing 5 ISO (MGI:3584078|PMID:15983387) MGI PMID:15983387 MGI:3584078 NCBI chrNW_004955481:6,986,128...7,031,113
Ensembl chrNW_004955481:6,986,502...7,030,742
JBrowse link
G Atm ATM serine/threonine kinase ISO (MGI:3714678|PMID:17476307)
(MGI:1926715|PMID:11040211), (MGI:3652689|PMID:16777961)
MGI PMID:11040211 PMID:16777961 PMID:17476307 MGI:1926715 MGI:3652689 MGI:3714678 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Bad BCL2 associated agonist of cell death ISO (MGI:3029504|PMID:12431371)
(MGI:3057092|PMID:15231831)
MGI PMID:12431371 PMID:15231831 MGI:3029504 MGI:3057092 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bak1 BCL2 antagonist/killer 1 ISO (MGI:3689797|PMID:15901672)
(MGI:3581932|PMID:15967824)
MGI PMID:15901672 PMID:15967824 MGI:3581932 MGI:3689797 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:3581932|PMID:15967824)
(MGI:3689797|PMID:15901672)
(MGI:2675761|PMID:12952892)
MGI PMID:12952892 PMID:15901672 PMID:15967824 MGI:2675761 MGI:3581932 MGI:3689797 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:3584078|PMID:15983387) MGI PMID:15983387 MGI:3584078 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Bcl2l1 BCL2 like 1 ISO (MGI:2677658|PMID:14517295) MGI PMID:14517295 MGI:2677658 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
G Bcl2l11 BCL2 like 11 involved_in ISO (MGI:3581932|PMID:15967824)
(PMID:11546872)
MGI PMID:11546872 PMID:15967824 MGI:3581932 NCBI chrNW_004955470:2,740,682...2,780,225 JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in ISO (PMID:14654789) MGI PMID:14654789 NCBI chrNW_004955451:16,819,463...16,870,780 JBrowse link
G Brca2 BRCA2 DNA repair associated ISO (MGI:3714678|PMID:17476307) MGI PMID:17476307 MGI:3714678 NCBI chrNW_004955431:13,449,287...13,526,878
Ensembl chrNW_004955431:13,449,543...13,527,432
JBrowse link
G Casp9 caspase 9 involved_in ISO (PMID:15657060) UniProt PMID:15657060 NCBI chrNW_004955527:2,613,691...2,630,217
Ensembl chrNW_004955527:2,613,683...2,629,738
JBrowse link
G Chek2 checkpoint kinase 2 involved_in ISO (PMID:12402044)
(PMID:12717439), (PMID:18644861)
UniProt PMID:12402044 PMID:12717439 PMID:18644861 NCBI chrNW_004955455:2,969,113...3,008,004
Ensembl chrNW_004955455:2,969,270...3,003,173
JBrowse link
G Crip1 cysteine rich protein 1 involved_in ISO (PMID:20415737) UniProt PMID:20415737 NCBI chrNW_004955538:3,683,747...3,686,468 JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO (PMID:12717439) UniProt PMID:12717439 NCBI chrNW_004955422:27,638,625...27,643,261
Ensembl chrNW_004955422:27,633,827...27,642,241
JBrowse link
G Ei24 EI24 autophagy associated transmembrane protein ISO (MGI:1350723|PMID:10594026) MGI PMID:10594026 MGI:1350723 NCBI chrNW_004955412:26,574,814...26,586,154
Ensembl chrNW_004955412:26,574,866...26,585,161
JBrowse link
G Epha2 EPH receptor A2 involved_in ISO (PMID:18339848) UniProt PMID:18339848 NCBI chrNW_004955527:2,120,447...2,151,932
Ensembl chrNW_004955527:2,120,266...2,152,781
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (MGI:1913261|PMID:11005836) MGI PMID:11005836 MGI:1913261 NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133
JBrowse link
G Fnip2 folliculin interacting protein 2 ISO (MGI:5284752|PMID:19137017) UniProt PMID:19137017 MGI:5284752 NCBI chrNW_004955471:12,329,686...12,444,782
Ensembl chrNW_004955471:12,378,827...12,445,207
JBrowse link
G Hic1 HIC ZBTB transcriptional repressor 1 involved_in ISO (MGI:5297787|PMID:16269335)
(PMID:16269335)
UniProt PMID:16269335 MGI:5297787 NCBI chrNW_004955481:1,179,015...1,182,936
Ensembl chrNW_004955481:1,179,015...1,181,825
JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:11854317 RGD:625692 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
JBrowse link
G Htra2 HtrA serine peptidase 2 involved_in ISO (PMID:11602612) ParkinsonsUK-UCL PMID:11602612 NCBI chrNW_004955424:11,255,756...11,259,170
Ensembl chrNW_004955424:11,255,756...11,259,170
JBrowse link
G Ier3 immediate early response 3 ISO (MGI:3775338|PMID:11753682) MGI PMID:11753682 MGI:3775338 NCBI chrNW_004955583:730,353...731,301
Ensembl chrNW_004955583:730,289...731,260
JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO (PMID:20188669) UniProt PMID:20188669 NCBI chrNW_004955406:42,056,014...42,077,701
Ensembl chrNW_004955406:42,056,014...42,077,701
JBrowse link
G Mael maelstrom spermatogenic transposon silencer ISO (MGI:3813746|PMID:18694567) MGI PMID:18694567 MGI:3813746 NCBI chrNW_004955462:9,902,978...9,934,814
Ensembl chrNW_004955462:9,903,006...9,934,570
JBrowse link
G Mbd4 methyl-CpG binding domain 4, DNA glycosylase ISO (MGI:2678630|PMID:14562041) MGI PMID:14562041 MGI:2678630 NCBI chrNW_004955429:17,858,656...17,868,111
Ensembl chrNW_004955429:17,858,937...17,869,262
JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member ISO (MGI:3689797|PMID:15901672) MGI PMID:15901672 MGI:3689797 NCBI chrNW_004955413:238,043...243,317 JBrowse link
G Mlh1 mutL homolog 1 ISO (MGI:2678630|PMID:14562041) MGI PMID:14562041 MGI:2678630 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
JBrowse link
G Msh2 mutS homolog 2 ISO (MGI:3029112|PMID:14744764)
(MGI:1334080|PMID:10097137)
MGI PMID:10097137 PMID:14744764 MGI:1334080 MGI:3029112 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698
JBrowse link
G Msh6 mutS homolog 6 ISO (MGI:3053495|PMID:15324697) MGI PMID:15324697 MGI:3053495 NCBI chrNW_004955441:14,451,207...14,471,316
Ensembl chrNW_004955441:14,451,307...14,471,227
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:2677658|PMID:14517295) MGI PMID:14517295 MGI:2677658 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chrNW_004955409:35,931,208...35,941,555
Ensembl chrNW_004955409:35,931,173...35,940,696
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chrNW_004955446:1,020,707...1,098,327
Ensembl chrNW_004955446:1,020,043...1,098,820
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chrNW_004955402:44,005,517...44,010,722 JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:3580934|PMID:15626733)
(PMID:12402044)
(MGI:1306978|PMID:9806545)
MGI
UniProt
PMID:9806545 PMID:12402044 PMID:15626733 MGI:1306978 MGI:3580934 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Polb DNA polymerase beta ISO (MGI:1334987|PMID:10197627) MGI PMID:10197627 MGI:1334987 NCBI chrNW_004955536:542,179...595,198
Ensembl chrNW_004955536:540,836...595,198
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO (MGI:2450507|PMID:12604618) MGI PMID:12604618 MGI:2450507 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Sfn stratifin involved_in ISO (PMID:11574543) HGNC-UCL PMID:11574543 NCBI chrNW_004955452:6,217,519...6,218,481
Ensembl chrNW_004955452:6,217,698...6,218,444
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:5297787|PMID:16269335) UniProt PMID:16269335 MGI:5297787 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Sod2 superoxide dismutase 2 ISO (MGI:3691744|PMID:15642323) MGI PMID:15642323 MGI:3691744 NCBI chrNW_004955439:21,209,101...21,223,538
Ensembl chrNW_004955439:21,209,101...21,224,163
JBrowse link
G Tnf tumor necrosis factor ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chrNW_004955413:3,982,670...3,996,320
Ensembl chrNW_004955413:3,981,400...3,996,021
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chrNW_004955486:1,790,531...1,817,986
Ensembl chrNW_004955486:1,792,115...1,818,362
JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in ISO (PMID:20188669) UniProt PMID:20188669 NCBI chrNW_004955472:3,073,090...3,076,607 JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats ISO (MGI:3056865|PMID:15271982) MGI PMID:15271982 MGI:3056865 NCBI chrNW_004955450:6,122,271...6,195,345
Ensembl chrNW_004955450:6,122,439...6,197,177
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor ISO (MGI:1913261|PMID:11005836) MGI PMID:11005836 MGI:1913261 NCBI chrNW_004955419:27,751,042...27,774,917
Ensembl chrNW_004955419:27,751,043...27,774,917
JBrowse link
intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aen apoptosis enhancing nuclease involved_in ISO (PMID:18264133) UniProt PMID:18264133 NCBI chrNW_004955416:16,328,655...16,338,069
Ensembl chrNW_004955416:16,331,290...16,338,078
JBrowse link
G Atad5 ATPase family AAA domain containing 5 ISO (MGI:3584078|PMID:15983387) MGI PMID:15983387 MGI:3584078 NCBI chrNW_004955481:6,986,128...7,031,113
Ensembl chrNW_004955481:6,986,502...7,030,742
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:17403783) UniProt PMID:17403783 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Bbc3 BCL2 binding component 3 ISO (MGI:3603103|PMID:16151013) MGI PMID:16151013 MGI:3603103 NCBI chrNW_004955574:1,167,790...1,174,966 JBrowse link
G Bcl3 BCL3 transcription coactivator involved_in ISO (PMID:16384933) MGI PMID:16384933 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466
JBrowse link
G Brca2 BRCA2 DNA repair associated ISO (MGI:3579926|PMID:15735671)
(MGI:3714678|PMID:17476307)
MGI PMID:15735671 PMID:17476307 MGI:3579926 MGI:3714678 NCBI chrNW_004955431:13,449,287...13,526,878
Ensembl chrNW_004955431:13,449,543...13,527,432
JBrowse link
G Cdip1 cell death inducing p53 target 1 involved_in ISO (PMID:17599062) MGI PMID:17599062 NCBI chrNW_004955442:12,895,403...12,913,517
Ensembl chrNW_004955442:12,895,702...12,913,517
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479
JBrowse link
G Chek2 checkpoint kinase 2 ISO (MGI:1354114|PMID:10710310) MGI PMID:10710310 MGI:1354114 NCBI chrNW_004955455:2,969,113...3,008,004
Ensembl chrNW_004955455:2,969,270...3,003,173
JBrowse link
G Ddit4 DNA damage inducible transcript 4 ISO (MGI:5298149|PMID:21896779) UniProt PMID:21896779 MGI:5298149 NCBI chrNW_004955437:19,322,407...19,324,562
Ensembl chrNW_004955437:19,322,407...19,324,562
JBrowse link
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in ISO (PMID:17349958) UniProt PMID:17349958 NCBI chrNW_004955458:14,199,912...14,201,712
Ensembl chrNW_004955458:14,193,303...14,218,957
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:17403783) UniProt PMID:17403783 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 ISO (MGI:3619785|PMID:16537918) MGI PMID:16537918 MGI:3619785 NCBI chrNW_004955435:17,201,866...17,257,371
Ensembl chrNW_004955435:17,172,651...17,257,371
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:3619785|PMID:16537918) MGI PMID:16537918 MGI:3619785 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_