ONTOLOGY REPORT - ANNOTATIONS
Term: ATP-dependent activity, acting on RNA
Accession: GO:0008186
browse the term
Definition: Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of RNA, and it drives another reaction.
Synonyms: exact_synonym: ATPase, acting on RNA; RNA-dependent adenosinetriphosphatase activity
related_synonym: ATPase activity, acting on RNA; RNA-dependent ATPase activity
alt_id: GO:0004010
xref: Reactome:R-HSA-9770847 "Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new)"; Reactome:R-HSA-9772351 "Disassembly of the Intron Lariat Spliceosome (new)"
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Ddx11
DEAD/H-box helicase 11
enables
ISO
(PMID:27477908)
RGD
PMID:27477908
NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
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Ddx39b
DExD-box helicase 39B
enables
ISO
(PMID:17562711)
RGD
PMID:17562711
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
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Ighmbp2
immunoglobulin mu DNA binding protein 2
enables
ISO ISS
(PMID:19158098) GO_REF:0000024
RGD UniProt
PMID:19158098
GO_REF:0000024
NCBI chr 1:200,506,641...200,529,293
Ensembl chr 1:200,506,338...200,529,514
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Ythdc2
YTH N6-methyladenosine RNA binding protein C2
enables
ISO
(PMID:21559518)
RGD
PMID:21559518
NCBI chr18:37,266,559...37,331,681
Ensembl chr18:37,265,836...37,331,023
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Dhx9
DExH-box helicase 9
enables
ISO
(PMID:1537828), (PMID:21561811)
RGD
PMID:1537828 PMID:21561811
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
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Aqr
aquarius intron-binding spliceosomal factor
enables
ISO
(PMID:25599396)
RGD
PMID:25599396
NCBI chr 3:100,874,987...100,945,026
Ensembl chr 3:100,874,987...100,945,044
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Dhx38
DEAH-box helicase 38
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:37,512,893...37,530,135
Ensembl chr19:37,512,891...37,530,140
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Dhx9
DExH-box helicase 9
enables
ISO
(PMID:1537828), (PMID:21561811)
RGD
PMID:1537828 PMID:21561811
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
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Skic2
SKI2 subunit of superkiller complex
enables
ISO
(PMID:35120588)
RGD
PMID:35120588
NCBI chr20:3,982,494...3,993,261
Ensembl chr20:3,982,593...3,993,261
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Supv3l1
Suv3 like RNA helicase
enables
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:15096047), (PMID:19509288), (PMID:35481630)
Ensembl UniProt RGD
PMID:15096047 PMID:19509288 PMID:35481630
GO_REF:0000024 GO_REF:0000107
NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
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Ythdc2
YTH N6-methyladenosine RNA binding protein C2
enables
ISO
(PMID:29033321) (PMID:29360036)
RGD
PMID:29033321 PMID:29360036
NCBI chr18:37,266,559...37,331,681
Ensembl chr18:37,265,836...37,331,023
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Pif1
PIF1 5'-to-3' DNA helicase
enables
ISO
(PMID:16522649)
RGD
PMID:16522649
NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200
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Ighmbp2
immunoglobulin mu DNA binding protein 2
enables
IEA ISO ISS
GO_REF:0000107 (PMID:19158098) GO_REF:0000024
Ensembl RGD UniProt
PMID:19158098
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:200,506,641...200,529,293
Ensembl chr 1:200,506,338...200,529,514
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Mov10
Mov10 RNA helicase
enables
ISO
(PMID:24726324)
RGD
PMID:24726324
NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
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AABR07061614.1
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 4:136,953,750...136,954,480
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Ddx1
DEAD-box helicase 1
enables
ISO ISS
(PMID:18710941) GO_REF:0000024
RGD UniProt
PMID:18710941
GO_REF:0000024
NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365
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G3bp1
G3BP stress granule assembly factor 1
enables
ISO IBA
(PMID:9889278) GO_REF:0000033
RGD GO_Central
PMID:9889278
GO_REF:0000033
NCBI chr10:39,586,864...39,620,268
Ensembl chr10:39,586,864...39,620,268
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AABR07061614.1
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 4:136,953,750...136,954,480
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Ddx1
DEAD-box helicase 1
enables
ISO ISS
(PMID:12183465), (PMID:18710941) GO_REF:0000024
RGD UniProt
PMID:12183465 PMID:18710941
GO_REF:0000024
NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365
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Ddx10
DEAD-box helicase 10
enables
IEA
GO_REF:0000003
UniProt
GO_REF:0000003
NCBI chr 8:53,488,656...53,643,373
Ensembl chr 8:53,488,656...53,643,373
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Ddx17
DEAD-box helicase 17
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
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Ddx19a
DEAD-box helicase 19A
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:38,942,497...38,962,853
Ensembl chr19:38,942,496...38,962,854
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Ddx19b
DEAD-box helicase 19B
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:38,968,215...38,998,907
Ensembl chr19:38,968,215...38,997,259
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Ddx20
DEAD-box helicase 20
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:193,158,761...193,168,484
Ensembl chr 2:193,158,823...193,166,774
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Ddx21
DExD-box helicase 21
enables
ISO IBA ISS
(PMID:25470060), (PMID:28790157), (PMID:9461305) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:9461305 PMID:25470060 PMID:28790157
GO_REF:0000024 GO_REF:0000033
NCBI chr20:30,534,319...30,554,513
Ensembl chr20:30,534,319...30,554,543
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Ddx24
DEAD-box helicase 24
enables
IEA
GO_REF:0000003 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000003
NCBI chr 6:122,564,767...122,582,032
Ensembl chr 6:122,564,767...122,581,927
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Ddx25
DEAD-box helicase 25
enables
IDA IEA ISO IBA ISS
GO_REF:0000107 (PMID:10608860) GO_REF:0000033 GO_REF:0000024
Ensembl RGD GO_Central UniProt
PMID:10608860 PMID:10608860
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:68232
NCBI chr 8:33,894,224...33,910,377
Ensembl chr 8:33,894,232...33,921,764
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Ddx27
DEAD-box helicase 27
enables
IEA
GO_REF:0000003 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000003
NCBI chr 3:155,744,182...155,763,380
Ensembl chr 3:155,744,150...155,763,372
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Ddx28
DEAD-box helicase 28
enables
IEA
GO_REF:0000003
UniProt
GO_REF:0000003
NCBI chr19:33,909,799...33,911,729
Ensembl chr19:33,909,801...33,911,742
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Ddx3
DEAD-box helicase 3
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:98,520,538...98,523,707
Ensembl chr13:98,520,201...98,524,176
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Ddx31
DEAD-box helicase 31
enables
IEA
GO_REF:0000003
UniProt
GO_REF:0000003
NCBI chr 3:12,172,829...12,238,392
Ensembl chr 3:12,172,836...12,238,873
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Ddx39a
DExD-box helicase 39A
enables
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr19:24,418,743...24,427,422
Ensembl chr19:24,418,114...24,426,954
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Ddx39b
DExD-box helicase 39B
enables
ISO IBA IEA
(PMID:17562711), (PMID:18593880) GO_REF:0000033 GO_REF:0000107 GO_REF:0000002 GO_REF:0000003
RGD GO_Central Ensembl InterPro UniProt
PMID:17562711 PMID:18593880
GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
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Ddx3x
DEAD-box helicase 3, X-linked
enables
ISO IBA
(PMID:21589879), (PMID:31575075) GO_REF:0000033
RGD GO_Central
PMID:21589879 PMID:31575075
GO_REF:0000033
NCBI chr X:9,479,532...9,493,169
Ensembl chr X:9,479,532...9,493,168
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Ddx3y
DEAD box helicase 3, Y-linked
enables
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr Y:1,115,095...1,135,754
Ensembl chr Y:1,116,309...1,135,706
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Ddx4
DEAD-box helicase 4
enables
IEA IBA
GO_REF:0000003 GO_REF:0000033 GO_REF:0000002
UniProt GO_Central InterPro
GO_REF:0000002 GO_REF:0000003 GO_REF:0000033
NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
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Ddx41
DEAD-box helicase 41
enables
IBA ISO
GO_REF:0000033 (PMID:35613581)
GO_Central RGD
PMID:35613581
GO_REF:0000033
NCBI chr17:9,102,926...9,108,415
Ensembl chr17:9,103,010...9,108,415
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Ddx41l1
DEAD-box helicase 41 like 1
enables
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 6:107,185,923...107,187,961
Ensembl chr 6:107,186,096...107,187,961
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Ddx42
DEAD-box helicase 42
enables
ISO
(PMID:16397294)
RGD
PMID:16397294
NCBI chr10:91,148,926...91,180,940
Ensembl chr10:91,148,254...91,180,939
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Ddx43
DEAD-box helicase 43
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:79,255,001...79,284,468
Ensembl chr 8:79,255,655...79,284,453
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Ddx46
DEAD-box helicase 46
enables
IEA
GO_REF:0000003 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000003
NCBI chr17:8,942,070...8,988,440
Ensembl chr17:8,944,454...8,988,439
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Ddx47
DEAD-box helicase 47
enables
IEA
GO_REF:0000003 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000003
NCBI chr 4:167,845,652...167,858,115
Ensembl chr 4:167,845,640...167,859,115
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Ddx49
DEAD-box helicase 49
enables
IEA ISO
GO_REF:0000003 (PMID:29618122) GO_REF:0000002
UniProt RGD InterPro
PMID:29618122
GO_REF:0000002 GO_REF:0000003
NCBI chr16:19,125,388...19,133,042
Ensembl chr16:19,125,384...19,133,616
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Ddx5
DEAD-box helicase 5
enables
IDA IBA ISO
GO_REF:0000033 (PMID:21343338)
GO_Central RGD
PMID:21343338 PMID:7525583
GO_REF:0000033, RGD:5128519
NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
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Ddx50
DExD-box helicase 50
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:30,561,623...30,591,324
Ensembl chr20:30,560,544...30,591,152
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Ddx52
DExD-box helicase 52
enables
NAS IEA
GO_REF:0000002
InterPro RGD
PMID:9154839
GO_REF:0000002, RGD:704356
NCBI chr10:68,824,594...68,847,400
Ensembl chr10:68,824,645...68,848,266
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Ddx54
DEAD-box helicase 54
enables
ISO
(PMID:12466272)
RGD
PMID:12466272
NCBI chr12:35,934,713...35,949,956
Ensembl chr12:35,934,716...35,972,523
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Ddx55
DEAD-box helicase 55
enables
IEA
GO_REF:0000003 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000003
NCBI chr12:32,034,462...32,050,218
Ensembl chr12:32,034,462...32,050,219
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Ddx56
DEAD-box helicase 56
enables
IEA
GO_REF:0000003
UniProt
GO_REF:0000003
NCBI chr14:81,112,008...81,122,331
Ensembl chr14:81,112,012...81,122,333
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Ddx59
DEAD-box helicase 59
enables
IEA IBA
GO_REF:0000003 GO_REF:0000033 GO_REF:0000002
UniProt GO_Central InterPro
GO_REF:0000002 GO_REF:0000003 GO_REF:0000033
NCBI chr13:47,876,258...47,901,214
Ensembl chr13:47,876,261...47,901,214
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Ddx6
DEAD-box helicase 6
enables
IEA
GO_REF:0000003 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000003
NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
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Dhx15
DEAH-box helicase 15
enables
ISO
(PMID:32179686)
RGD
PMID:32179686
NCBI chr14:58,787,147...58,825,083
Ensembl chr14:58,787,127...58,825,088
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Dhx16
DEAH-box helicase 16
enables
IEA
GO_REF:0000003
UniProt
GO_REF:0000003
NCBI chr20:2,862,000...2,874,991
Ensembl chr20:2,862,000...2,874,948
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Dhx29
DExH-box helicase 29
enables
IEA
GO_REF:0000003 GO_REF:0000104
UniProt
GO_REF:0000003 GO_REF:0000104
NCBI chr 2:44,560,653...44,611,450
Ensembl chr 2:44,560,714...44,611,445
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Dhx30
DExH-box helicase 30
enables
IEA ISO IBA ISS
GO_REF:0000003 (PMID:25219788) GO_REF:0000033 GO_REF:0000107 GO_REF:0000024 (PMID:29100085)
UniProt RGD GO_Central Ensembl
PMID:25219788 PMID:29100085
GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 8:110,064,751...110,096,954
Ensembl chr 8:110,064,752...110,097,381
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Dhx33
DEAH-box helicase 33
enables
IEA
GO_REF:0000003
UniProt
GO_REF:0000003
NCBI chr10:55,708,102...55,724,618
Ensembl chr10:55,705,756...55,724,567
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Dhx35
DEAH-box helicase 35
enables
IEA
GO_REF:0000003
UniProt
GO_REF:0000003
NCBI chr 3:147,450,178...147,507,473
Ensembl chr 3:147,450,163...147,507,451
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Dhx36
DEAH-box helicase 36
enables
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:14731398), (PMID:18842585), (PMID:21846770)
UniProt GO_Central RGD
PMID:14731398 PMID:18842585 PMID:21846770
GO_REF:0000024 GO_REF:0000033
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
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Dhx40
DEAH-box helicase 40
enables
IEA
GO_REF:0000003
UniProt
GO_REF:0000003
NCBI chr10:71,584,546...71,621,479
Ensembl chr10:71,583,716...71,621,445
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Dhx58
DEXH-box helicase 58
enables
ISO
(PMID:19211564)
RGD
PMID:19211564
NCBI chr10:85,620,352...85,631,776
Ensembl chr10:85,620,357...85,631,525
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Dhx8
DEAH-box helicase 8
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:86,667,641...86,704,198
Ensembl chr10:86,667,834...86,705,137
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Dhx9
DExH-box helicase 9
enables
ISO IBA
(PMID:28221134) GO_REF:0000033
RGD GO_Central
PMID:28221134
GO_REF:0000033
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
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Eif4a1
eukaryotic translation initiation factor 4A1
enables
IEA
GO_REF:0000003 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000003
NCBI chr10:54,384,345...54,389,855
Ensembl chr10:54,384,347...54,389,858
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Eif4a1-ps8
eukaryotic translation initiation factor 4A1, pseudogene 8
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:76,623,866...76,625,179
Ensembl chr 6:76,623,866...76,625,392
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Eif4a2
eukaryotic translation initiation factor 4A2
enables
IEA
GO_REF:0000003 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000003
NCBI chr11:77,764,126...77,770,810
Ensembl chr11:77,764,124...77,770,781
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Eif4a3
eukaryotic translation initiation factor 4A3
enables
ISO IBA IEA
(PMID:10523622) GO_REF:0000033 GO_REF:0000002
RGD GO_Central InterPro
PMID:10523622
GO_REF:0000002 GO_REF:0000033
NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
G
ENSRNOG00000066881
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr13:2,852,897...2,854,568
G
ENSRNOG00000068837
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 1:4,760,023...4,760,893
G
ENSRNOG00000069412
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr14:65,774,228...65,774,657
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G3bp1
G3BP stress granule assembly factor 1
enables
ISO IBA
(PMID:9889278) GO_REF:0000033
RGD GO_Central
PMID:9889278
GO_REF:0000033
NCBI chr10:39,586,864...39,620,268
Ensembl chr10:39,586,864...39,620,268
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Helz2
helicase with zinc finger 2
enables
ISO
(PMID:37602378)
RGD
PMID:37602378
NCBI chr 3:168,338,813...168,353,219
Ensembl chr 3:168,338,813...168,353,159
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Ifih1
interferon induced with helicase C domain 1
enables
ISO
(PMID:19211564)
RGD
PMID:19211564
NCBI chr 3:47,228,980...47,275,403
Ensembl chr 3:47,227,364...47,275,456
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LOC100912568
probable ATP-dependent RNA helicase DDX41-like
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:107,230,038...107,231,786
Ensembl chr 6:107,226,563...107,244,212
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Mov10l1
Mov10 like RNA helicase 1
enables
ISO
(PMID:25762440)
RGD
PMID:25762440
NCBI chr 7:120,070,171...120,135,406
Ensembl chr 7:120,070,135...120,134,765
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Mtrex
Mtr4 exosome RNA helicase
enables
ISO IBA
(PMID:29844170), (PMID:29906447) GO_REF:0000033
RGD GO_Central
PMID:29844170 PMID:29906447
GO_REF:0000033
NCBI chr 2:44,500,326...44,560,624
Ensembl chr 2:44,461,444...44,560,627
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Rig1
RNA sensor RIG-1
enables
ISO
(PMID:19211564)
RGD
PMID:19211564
NCBI chr 5:55,321,351...55,369,947
Ensembl chr 5:55,321,235...55,370,819
G
Skic2
SKI2 subunit of superkiller complex
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,982,494...3,993,261
Ensembl chr20:3,982,593...3,993,261
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Snrnp200
small nuclear ribonucleoprotein U5 subunit 200
enables
IEA IBA ISO ISS
GO_REF:0000107 GO_REF:0000033 (PMID:23045696), (PMID:35241646) GO_REF:0000024
Ensembl GO_Central RGD UniProt
PMID:23045696 PMID:35241646
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182
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Supv3l1
Suv3 like RNA helicase
enables
ISO IBA ISS
(PMID:19509288) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:19509288
GO_REF:0000024 GO_REF:0000033
NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
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Tdrd9
tudor domain containing 9
enables
IEA
GO_REF:0000003
UniProt
GO_REF:0000003
NCBI chr 6:131,029,644...131,145,076
Ensembl chr 6:131,029,652...131,144,651
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Upf1
UPF1, RNA helicase and ATPase
enables
ISO IBA
(PMID:12554878), (PMID:21419344) GO_REF:0000033
RGD GO_Central
PMID:12554878 PMID:21419344
GO_REF:0000033
NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all