Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:cyclin/CDK positive transcription elongation factor complex
go back to main search page
Accession:GO:0008024 term browser browse the term
Definition:A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.
Comment:See also the cellular component terms 'cyclin-dependent protein kinase activating kinase holoenzyme complex ; GO:0019907' and 'DNA-directed RNA polymerase II, holoenzyme ; GO:0016591'.
Synonyms:related_synonym: positive transcription elongation factor complex b

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
cyclin/CDK positive transcription elongation factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 part_of ISO (PMID:23752591) MGI PMID:23752591 NCBI chrNW_004955495:7,959,033...7,989,216
Ensembl chrNW_004955495:7,957,510...7,988,498 		JBrowse link
G Ccnt1 cyclin T1 part_of
located_in		 ISO (PMID:15905409), (PMID:9499409)
(PMID:18566585)		 UniProt
ComplexPortal		 PMID:9499409 PMID:15905409 PMID:18566585 NCBI chrNW_004955500:7,580,625...7,606,913
Ensembl chrNW_004955500:7,580,625...7,606,913 		JBrowse link
G Ccnt2 cyclin T2 part_of
located_in		 ISO (PMID:9499409) UniProt
ComplexPortal		 PMID:9499409 NCBI chrNW_004955440:2,424,976...2,468,388
Ensembl chrNW_004955440:2,424,978...2,470,811 		JBrowse link
G Cdk9 cyclin dependent kinase 9 part_of
located_in		 ISO (PMID:15905409), (PMID:9499409)
(PMID:23752591)
(PMID:18566585), (PMID:9499409)		 UniProt
MGI
ComplexPortal		 PMID:9499409 PMID:15905409 PMID:18566585 PMID:23752591 NCBI chrNW_004955419:874,959...883,160
Ensembl chrNW_004955419:873,289...883,160 		JBrowse link
G Rb1 RB transcriptional corepressor 1 located_in ISO (PMID:12037672) UniProt PMID:12037672 NCBI chrNW_004955431:1,960,765...2,124,576
Ensembl chrNW_004955431:1,960,661...2,124,576 		JBrowse link
G Snw1 SNW domain containing 1 located_in ISO (PMID:15905409) UniProt PMID:15905409 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492 		JBrowse link
P-TEFb complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt1 cyclin T1 part_of ISO (PMID:18483487), (PMID:28431135), (PMID:29849146), (PMID:30134174) FlyBase PMID:18483487 PMID:28431135 PMID:29849146 PMID:30134174 NCBI chrNW_004955500:7,580,625...7,606,913
Ensembl chrNW_004955500:7,580,625...7,606,913 		JBrowse link
G Cdk9 cyclin dependent kinase 9 part_of ISO (PMID:18483487), (PMID:30134174) FlyBase PMID:18483487 PMID:30134174 NCBI chrNW_004955419:874,959...883,160
Ensembl chrNW_004955419:873,289...883,160 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12540
    protein-containing complex 4399
      nuclear protein-containing complex 976
        carboxy-terminal domain protein kinase complex 15
          cyclin/CDK positive transcription elongation factor complex 6
            CTDK-1 complex 0
            P-TEFb complex 2
Path 2
Term Annotations click to browse term
  cellular_component 12540
    cellular anatomical entity 12383
      organelle 9776
        membrane-bounded organelle 8912
          intracellular membrane-bounded organelle 8464
            nucleus 5234
              nuclear lumen 3565
                nucleoplasm 3197
                  transcription elongation factor complex 42
                    cyclin/CDK positive transcription elongation factor complex 6
                      CTDK-1 complex 0
                      P-TEFb complex 2
paths to the root