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ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic vesicle
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Accession:GO:0008021 term browser browse the term
Definition:A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
Comment:This term should not be confused with GO:0097547 'synaptic vesicle protein transport vesicle'. STVs and synaptic vesicles differ both functionally and morphologically. Functionally, STVs are transport vesicles that deliver synaptic vesicle proteins to synapses, while synaptic vesicles are responsible for transmitter release at synapses. Morphologically, synaptic vesicles are very homogeneous, while STVs are very heterogeneous in size and shape. STVs might be a precursor for synaptic vesicles.
Synonyms:narrow_synonym: docked vesicle
 xref: NIF_Subcellular:sao1071221672;   Wikipedia:Synaptic_vesicle

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synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM10 ADAM metallopeptidase domain 10 ISO MMO:0000669, MMO:0000679 RGD PMID:26296617 RGD:13782154 NCBI chr26:24,768,827...24,921,169
Ensembl chr26:24,768,915...24,919,009 		JBrowse link
G ANXA5 annexin A5 ISO RGD PMID:8931014 RGD:10053658 NCBI chr 7:68,940,365...68,970,324
Ensembl chr 7:68,940,304...68,970,811 		JBrowse link
G AP1B1 adaptor related protein complex 1 subunit beta 1 is_active_in
located_in		 ISO
IEA		 (PMID:34736896) SynGO
Ensembl		 PMID:34736896 GO_REF:0000107 NCBI chr19:12,195,981...12,259,289
Ensembl chr19:12,195,755...12,259,272 		JBrowse link
G AP2A1 adaptor related protein complex 2 subunit alpha 1 is_active_in ISO PMID:33376223 SynGO PMID:33376223 RGD:155230702 NCBI chr 6:42,933,303...42,968,963
Ensembl chr 6:42,953,693...42,969,427 		JBrowse link
G AP2A2 adaptor related protein complex 2 subunit alpha 2 is_active_in ISO PMID:33376223 RGD
SynGO		 PMID:2072093 PMID:33376223 RGD:13452390 RGD:155230702 NCBI chr 1:731,616...820,191
Ensembl chr 1:731,645...818,642 		JBrowse link
G AP2B1 adaptor related protein complex 2 subunit beta 1 is_active_in ISO PMID:33376223 SynGO PMID:33376223 RGD:155230702 NCBI chr16:29,061,662...29,198,942
Ensembl chr16:29,061,568...29,201,464 		JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 is_active_in ISO PMID:33376223 SynGO PMID:33376223 RGD:155230702 NCBI chr15:5,242,025...5,251,272 JBrowse link
G AP2S1 adaptor related protein complex 2 subunit sigma 1 is_active_in ISO PMID:33376223 SynGO PMID:33376223 RGD:155230702 NCBI chr 6:40,175,106...40,194,936 JBrowse link
G AP3M2 adaptor related protein complex 3 subunit mu 2 is_active_in ISO PMID:33376223 SynGO PMID:33376223 RGD:155230702 NCBI chr 8:40,142,577...40,161,013
Ensembl chr 8:40,142,666...40,161,008 		JBrowse link
G AP3S1 adaptor related protein complex 3 subunit sigma 1 is_active_in ISO PMID:33376223 SynGO PMID:33376223 RGD:155230702 NCBI chr23:19,087,684...19,158,201
Ensembl chr23:19,087,698...19,150,979 		JBrowse link
G APH1A aph-1 homolog A, gamma-secretase subunit ISO RGD PMID:20126630 RGD:13702254
G APP amyloid beta precursor protein NOT|located_in ISO
IEA		 PMID:8987743 AgBase
Ensembl		 PMID:8987743 GO_REF:0000107 RGD:8661630 NCBI chr 2:66,037,224...66,320,860
Ensembl chr 2:66,037,261...66,321,306 		JBrowse link
G ATG9A autophagy related 9A is_active_in ISO PMID:23622064 SynGO PMID:23622064 RGD:13702180 NCBI chr10:105,123,039...105,133,057
Ensembl chr10:105,124,412...105,131,409 		JBrowse link
G ATP6V0C ATPase H+ transporting V0 subunit c ISO RGD PMID:8567678 RGD:2301258 NCBI chr 5:2,387,891...2,394,111
Ensembl chr 5:2,387,812...2,394,180 		JBrowse link
G ATP6V0D1 ATPase H+ transporting V0 subunit d1 ISO RGD PMID:7961771 RGD:2301259 NCBI chr 5:59,976,118...60,018,414
Ensembl chr 5:60,002,544...60,017,894 		JBrowse link
G ATP6V1G1 ATPase H+ transporting V1 subunit G1 NOT|located_in ISO (PMID:12133826) MGI PMID:12133826 NCBI chr12:24,994,480...25,004,618
Ensembl chr12:24,994,051...25,004,668 		JBrowse link
G BACE1 beta-secretase 1 ISO MMO:0000669, MMO:0000679 RGD PMID:26296617 RGD:13782154 NCBI chr 1:108,659,723...108,689,879
Ensembl chr 1:108,657,584...108,689,843 		JBrowse link
G BCL2L1 BCL2 like 1 is_active_in ISO PMID:23792689 SynGO PMID:23792689 RGD:12793033 NCBI chr 2:36,059,024...36,118,332
Ensembl chr 2:36,058,919...36,116,470 		JBrowse link
G BDNF brain derived neurotrophic factor located_in ISO
IEA		 RGD
TreeGrafter		 PMID:17192436 GO_REF:0000118 RGD:1600576 NCBI chr 1:37,386,825...37,451,380
Ensembl chr 1:37,449,593...37,450,336 		JBrowse link
G BIN1 bridging integrator 1 located_in ISO
IEA		 RGD
TreeGrafter		 PMID:9348539 GO_REF:0000118 RGD:631926 NCBI chr10:3,112,605...3,173,522
Ensembl chr10:3,113,868...3,173,620 		JBrowse link
G BRSK1 BR serine/threonine kinase 1 located_in
is_active_in		 ISO PMID:16630837 UniProt
SynGO		 PMID:16630837 RGD:8553864 NCBI chr 6:47,888,813...47,915,019
Ensembl chr 6:47,888,920...47,917,920 		JBrowse link
G BSN bassoon presynaptic cytomatrix protein located_in ISO PMID:26212709 UniProt PMID:26212709 RGD:13792549 NCBI chr22:10,953,901...11,066,892
Ensembl chr22:11,018,966...11,059,701 		JBrowse link
G CADM1 cell adhesion molecule 1 located_in ISO (PMID:12202822) MGI PMID:12202822 NCBI chr 1:106,539,262...106,876,397
Ensembl chr 1:106,539,136...106,606,637 		JBrowse link
G CADPS2 calcium dependent secretion activator 2 NOT|located_in ISO (PMID:14715936) MGI PMID:14715936 NCBI chr21:91,117,749...91,669,284 JBrowse link
G CALCRL calcitonin receptor like receptor is_active_in ISO PMID:17614212 SynGO PMID:17614212 RGD:155230744 NCBI chr10:72,884,271...72,986,916
Ensembl chr10:72,887,139...72,925,198 		JBrowse link
G CDK16 cyclin dependent kinase 16 located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:44,405,672...44,416,478
Ensembl chr  X:44,410,598...44,416,818 		JBrowse link
G CLCN3 chloride voltage-gated channel 3 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:115,826,756...115,926,842
Ensembl chr 7:115,826,778...115,928,609 		JBrowse link
G CLCN4 chloride voltage-gated channel 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:8,611,443...8,692,944
Ensembl chr  X:8,611,485...8,693,192 		JBrowse link
G CLCN5 chloride voltage-gated channel 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:46,772,176...46,934,886
Ensembl chr  X:46,772,305...46,927,861 		JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,320,132...26,343,009
Ensembl chr 5:26,320,061...26,337,402 		JBrowse link
G COPS4 COP9 signalosome subunit 4 located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chr 7:31,426,600...31,466,590
Ensembl chr 7:31,427,121...31,466,721 		JBrowse link
G COPS5 COP9 signalosome subunit 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:62,905,924...62,925,205
Ensembl chr 8:62,905,906...62,925,201 		JBrowse link
G CTTNBP2 cortactin binding protein 2 ISO RGD PMID:9813110 RGD:632437 NCBI chr21:86,376,005...86,539,662
Ensembl chr21:86,376,011...86,527,223 		JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO RGD PMID:14694190 RGD:1600839 NCBI chr26:32,074,260...32,164,926
Ensembl chr26:32,132,425...32,164,277 		JBrowse link
G DBI diazepam binding inhibitor, acyl-CoA binding protein located_in ISO PMID:3819722 MGI PMID:3819722 RGD:8554614 NCBI chr10:10,956,529...10,962,135 JBrowse link
G DDC dopa decarboxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chr21:8,235,396...8,343,086
Ensembl chr21:8,235,343...8,343,361 		JBrowse link
G DGKI diacylglycerol kinase iota is_active_in
located_in		 ISO PMID:21119615 SynGO
MGI		 PMID:21119615 RGD:8554416 NCBI chr21:106,074,522...106,544,009
Ensembl chr21:106,076,928...106,317,825 		JBrowse link
G DISC1 DISC1 scaffold protein located_in ISO (PMID:18983980) MGI PMID:18983980 NCBI chr25:68,886,451...69,274,774
Ensembl chr25:68,946,430...69,263,198 		JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:6,562,953...6,592,247
Ensembl chr16:6,562,691...6,590,867 		JBrowse link
G DMXL2 Dmx like 2 located_in
is_active_in		 ISO (PMID:11809763) MGI
SynGO		 PMID:11809763 RGD:11058596 NCBI chr26:31,750,419...31,922,022
Ensembl chr26:31,750,403...31,922,208 		JBrowse link
G DNAJC5 DnaJ heat shock protein family (Hsp40) member C5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:303,195...310,618
Ensembl chr 2:307,988...310,475 		JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:12646135 RGD:8554278 NCBI chr12:9,874,098...9,927,737
Ensembl chr12:9,878,966...9,927,744 		JBrowse link
G DNMBP dynamin binding protein is_active_in ISO PMID:14506234 SynGO PMID:14506234 RGD:13513910 NCBI chr 9:92,926,283...93,048,228
Ensembl chr 9:92,923,953...93,047,554 		JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:9593967 RGD:9685450 NCBI chr 9:88,921,826...89,034,418
Ensembl chr 9:88,922,007...89,032,880 		JBrowse link
G ERC1 ELKS/RAB6-interacting/CAST family member 1 located_in ISO PMID:27626661 ARUK-UCL PMID:27626661 RGD:13601985 NCBI chr11:989,376...1,530,470
Ensembl chr11:1,030,294...1,524,817 		JBrowse link
G EXOC4 exocyst complex component 4 is_active_in ISO PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr21:101,885,192...102,694,892 JBrowse link
G GABBR1 gamma-aminobutyric acid type B receptor subunit 1 ISO RGD PMID:17924569 RGD:2315465 NCBI chr17:42,985,816...43,017,278
Ensembl chr17:42,986,513...43,014,577 		JBrowse link
G GIPC1 GIPC PDZ domain containing family member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:13,136,647...13,155,259
Ensembl chr 6:13,136,624...13,142,002 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr23:55,944,128...56,265,748
Ensembl chr23:56,101,294...56,265,849 		JBrowse link
G GRIA2 glutamate ionotropic receptor AMPA type subunit 2 located_in ISO (PMID:20418887) MGI PMID:20418887 NCBI chr 7:103,808,789...103,957,947
Ensembl chr 7:103,808,797...103,953,040 		JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 located_in ISO (PMID:10846156) MGI PMID:10846156 NCBI chr12:1,020,556...1,050,568
Ensembl chr12:1,019,263...1,050,231 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,233,028...9,707,322
Ensembl chr 5:9,286,775...9,462,828 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B located_in ISO (PMID:10846156), (PMID:20418887) MGI PMID:10846156 PMID:20418887 NCBI chr11:13,444,155...13,873,034
Ensembl chr11:13,456,968...13,873,202 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:19457116 RGD:5130974 NCBI chr 1:114,447,348...114,452,693
Ensembl chr 1:114,446,544...114,451,562 		JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO RGD PMID:16082681 RGD:6480682 NCBI chr 9:84,081,713...84,191,112
Ensembl chr 9:84,083,396...84,190,876 		JBrowse link
G KCNC4 potassium voltage-gated channel subfamily C member 4 located_in ISO RGD PMID:15207333 RGD:10411903 NCBI chr20:23,241,279...23,328,175
Ensembl chr20:23,304,679...23,327,382 		JBrowse link
G KCNK9 potassium two pore domain channel subfamily K member 9 ISO RGD PMID:15178438 RGD:2316531 NCBI chr 8:133,872,599...133,964,259
Ensembl chr 8:133,869,524...133,964,415 		JBrowse link
G KIF1A kinesin family member 1A ISO RGD PMID:12522103 RGD:12911232 NCBI chr10:126,784,843...126,890,649
Ensembl chr10:126,781,589...126,867,219 		JBrowse link
G KIF3C kinesin family member 3C ISO RGD PMID:9487132 RGD:729208 NCBI chr14:81,666,884...81,717,489
Ensembl chr14:81,666,793...81,717,508 		JBrowse link
G KIRREL3 kirre like nephrin family adhesion molecule 3 part_of
located_in		 ISO
IEA		 (PMID:25902260) CACAO
Ensembl		 PMID:25902260 GO_REF:0000107 NCBI chr 1:117,553,388...118,122,895
Ensembl chr 1:117,551,940...117,687,637 		JBrowse link
G LAMP1 lysosomal associated membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:91,295,758...91,319,881
Ensembl chr 3:91,295,681...91,321,333 		JBrowse link
G LAMP5 lysosomal associated membrane protein family member 5 is_active_in
located_in		 ISO
IEA		 (PMID:27272053) SynGO
Ensembl		 PMID:27272053 GO_REF:0000107 NCBI chr 2:28,602,479...28,619,632
Ensembl chr 2:28,601,497...28,624,572 		JBrowse link
G LGI3 leucine rich repeat LGI family member 3 located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:20,216,373...20,226,744
Ensembl chr 8:20,216,372...20,225,599 		JBrowse link
G LOC103226200 amphiphysin located_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:20,010,540...20,137,901
Ensembl chr21:20,010,640...20,138,987 		JBrowse link
G LOC103231893 synapsin-1 located_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000044 NCBI chr  X:44,748,994...44,797,053
Ensembl chr  X:44,750,046...44,797,009 		JBrowse link
G LRRK2 leucine rich repeat kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,490,775...36,634,215
Ensembl chr11:36,492,011...36,634,216 		JBrowse link
G MADD MAP kinase activating death domain ISO RGD PMID:12786944 RGD:1354686 NCBI chr 1:17,987,573...18,041,317
Ensembl chr 1:17,986,860...18,042,266 		JBrowse link
G MARCKSL1 MARCKS like 1 is_active_in ISO PMID:8557647 SynGO PMID:8557647 RGD:13702350 NCBI chr20:100,527,281...100,529,577 JBrowse link
G MFF mitochondrial fission factor ISO RGD PMID:23792689 RGD:12793033 NCBI chr10:113,348,330...113,381,875
Ensembl chr10:113,348,446...113,381,162 		JBrowse link
G MME membrane metalloendopeptidase located_in IEA Ensembl GO_REF:0000107 NCBI chr15:35,577,460...35,681,730
Ensembl chr15:35,580,714...35,633,914 		JBrowse link
G MT3 metallothionein 3 located_in ISO (PMID:7931547) RGD
UniProt		 PMID:7931547 PMID:8911664 RGD:9685810 NCBI chr 5:42,502,306...42,504,467 JBrowse link
G MTMR2 myotubularin related protein 2 located_in ISO PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 1:87,090,401...87,181,057
Ensembl chr 1:87,087,191...87,180,497 		JBrowse link
G MYLK2 myosin light chain kinase 2 ISO RGD PMID:16515842 RGD:1600505 NCBI chr 2:36,207,013...36,223,292
Ensembl chr 2:36,207,901...36,223,307 		JBrowse link
G MYO5A myosin VA ISO RGD PMID:16030255 RGD:1581734 NCBI chr26:30,865,947...31,085,184 JBrowse link
G NCSTN nicastrin located_in ISO
IEA		 RGD
Ensembl		 PMID:20126630 GO_REF:0000107 RGD:13702254 NCBI chr20:3,590,044...3,606,205
Ensembl chr20:3,590,725...3,606,066 		JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,797,858...7,831,211 JBrowse link
G NGF nerve growth factor located_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:18,361,795...18,413,987
Ensembl chr20:18,413,108...18,413,833 		JBrowse link
G NPY1R neuropeptide Y receptor Y1 ISO RGD PMID:11891789 RGD:1642318 NCBI chr 7:109,774,700...109,794,543
Ensembl chr 7:109,774,918...109,776,905 		JBrowse link
G NTF3 neurotrophin 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:5,477,208...5,542,404 JBrowse link
G NTF4 neurotrophin 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:42,254,693...42,284,899
Ensembl chr 6:42,279,190...42,279,822 		JBrowse link
G PARK7 Parkinsonism associated deglycase is_active_in
located_in		 ISO
IEA		 (PMID:29386384) SynGO
Ensembl		 PMID:29386384 GO_REF:0000107 NCBI chr20:123,776,084...123,808,031
Ensembl chr20:123,776,297...123,798,434 		JBrowse link
G PDE4B phosphodiesterase 4B located_in IEA Ensembl GO_REF:0000107 NCBI chr20:66,729,561...67,297,729
Ensembl chr20:66,728,664...66,771,691 		JBrowse link
G PDYN prodynorphin is_active_in ISO PMID:7911809 SynGO PMID:7911809 RGD:13702229 NCBI chr 2:54,535,516...54,551,085
Ensembl chr 2:54,535,240...54,551,104 		JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:11428049 RGD:2302814 NCBI chr11:113,469,845...113,479,177 JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:77,214,391...77,325,626
Ensembl chr 1:77,213,836...77,324,875 		JBrowse link
G PICK1 protein interacting with PRKCA 1 is_active_in
located_in		 ISO
IEA		 PMID:19071197 SynGO
TreeGrafter		 PMID:19071197 GO_REF:0000118 RGD:155230751 NCBI chr19:20,758,199...20,778,210
Ensembl chr19:20,759,960...20,779,514 		JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 is_active_in ISO PMID:11931740 SynGO PMID:11931740 RGD:619588 NCBI chr11:76,740,204...77,237,990
Ensembl chr11:76,736,719...77,079,140 		JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 located_in ISO
IEA		 RGD
Ensembl		 PMID:12270687 GO_REF:0000107 RGD:633701 NCBI chr20:92,809,373...92,833,048
Ensembl chr20:92,809,552...92,833,244 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:15480834 RGD:1599938 NCBI chr13:88,856,056...90,329,379 JBrowse link
G PRRT2 proline rich transmembrane protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,838,280...26,841,918
Ensembl chr 5:26,839,454...26,841,916 		JBrowse link
G PSEN1 presenilin 1 ISO RGD PMID:20126630 RGD:13702254 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132 		JBrowse link
G PSEN2 presenilin 2 ISO RGD PMID:20126630 RGD:13702254 NCBI chr25:2,862,354...2,888,735
Ensembl chr25:2,862,251...2,877,386 		JBrowse link
G PTPN5 protein tyrosine phosphatase non-receptor type 5 ISO RGD PMID:27103516 RGD:11574252 NCBI chr 1:46,134,109...46,197,246
Ensembl chr 1:46,153,340...46,199,002 		JBrowse link
G PTPRN protein tyrosine phosphatase receptor type N NOT|located_in ISO PMID:8641276 UniProt PMID:8641276 RGD:10402034 NCBI chr10:105,196,508...105,216,665
Ensembl chr10:105,196,505...105,216,525 		JBrowse link
G RAB11B RAB11B, member RAS oncogene family located_in ISO PMID:14627637 UniProt PMID:14627637 RGD:8554199 NCBI chr 6:7,743,130...7,757,237
Ensembl chr 6:7,743,361...7,757,305 		JBrowse link
G RAB3A RAB3A, member RAS oncogene family located_in ISO
IEA		 RGD
Ensembl		 PMID:8043272 GO_REF:0000107 RGD:2306269 NCBI chr 6:16,671,388...16,678,780
Ensembl chr 6:16,670,431...16,678,644 		JBrowse link
G RAB3B RAB3B, member RAS oncogene family located_in ISO (PMID:12167638), (PMID:12192047) MGI PMID:12167638 PMID:12192047 NCBI chr20:80,963,320...81,036,058
Ensembl chr20:80,963,398...81,035,657 		JBrowse link
G RAB3C RAB3C, member RAS oncogene family located_in ISO (PMID:12167638), (PMID:12192047) MGI PMID:12167638 PMID:12192047 NCBI chr 4:54,741,211...55,028,023 JBrowse link
G RAB3C RAB3C, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 Ensembl chr 4:54,742,185...55,024,515 JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in ISO PMID:8043272 RGD
ParkinsonsUK-UCL		 PMID:8043272 RGD:2306269 NCBI chr15:64,678,910...64,715,228
Ensembl chr15:64,682,723...64,713,928 		JBrowse link
G RABAC1 Rab acceptor 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 6:36,157,809...36,160,505
Ensembl chr 6:36,156,902...36,161,067 		JBrowse link
G RGS19 regulator of G protein signaling 19 located_in ISO (PMID:16819522) MGI PMID:16819522 NCBI chr 2:166,690...173,324
Ensembl chr 2:169,758...173,409 		JBrowse link
G RNF112 ring finger protein 112 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:17,996,532...18,002,842
Ensembl chr16:17,996,915...18,001,716 		JBrowse link
G RPH3A rabphilin 3A located_in ISO PMID:8617225 UniProt
RGD		 PMID:8617225 PMID:11466417 PMID:14960300 RGD:14397552 RGD:2314877 RGD:2314902 NCBI chr11:107,818,594...108,155,546
Ensembl chr11:108,077,043...108,155,539 		JBrowse link
G SCAMP5 secretory carrier membrane protein 5 ISO RGD PMID:11050114 RGD:68303 NCBI chr26:8,452,276...8,517,949 JBrowse link
G SEC22B SEC22 homolog B, vesicle trafficking protein is_active_in ISO PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr20:13,602,852...13,624,483
Ensembl chr20:13,602,870...13,622,650 		JBrowse link
G SEPTIN5 septin 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:6,022,074...6,030,880
Ensembl chr19:6,020,917...6,030,821 		JBrowse link
G SEPTIN6 septin 6 located_in IEA Ensembl GO_REF:0000107
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 ISO RGD PMID:18768694 RGD:13504749 NCBI chr20:46,707,556...46,746,785
Ensembl chr20:46,707,910...46,746,735 		JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:28262835 RGD:12880019 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SLC17A6 solute carrier family 17 member 6 located_in ISO (PMID:11432869)
PMID:11698620
PMID:11698619
PMID:11502256		 RGD
MGI
UniProt		 PMID:11432869 PMID:11502256 PMID:11698619 PMID:11698620 PMID:18502731 More... RGD:13702232 RGD:151665720 RGD:151665727 RGD:2324694 RGD:9999204 NCBI chr 1:42,634,754...42,677,309
Ensembl chr 1:42,636,512...42,677,165 		JBrowse link
G SLC17A7 solute carrier family 17 member 7 located_in ISO (PMID:15579147), (PMID:21378974) MGI PMID:15579147 PMID:21378974 NCBI chr 6:42,609,766...42,622,004
Ensembl chr 6:42,609,706...42,621,925 		JBrowse link
G SLC17A8 solute carrier family 17 member 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:95,673,205...95,740,037
Ensembl chr11:95,674,195...95,739,040 		JBrowse link
G SLC18A2 solute carrier family 18 member A2 ISO RGD PMID:7568015 PMID:19903816 RGD:2317337 RGD:5128868 NCBI chr 9:110,039,783...110,078,822
Ensembl chr 9:110,040,391...110,076,647 		JBrowse link
G SLC18A3 solute carrier family 18 member A3 ISO RGD PMID:15306235 RGD:2317428 NCBI chr 9:42,216,187...42,219,665
Ensembl chr 9:42,216,568...42,218,166 		JBrowse link
G SLC2A13 solute carrier family 2 member 13 NOT|located_in ISO (PMID:14749729) ARUK-UCL PMID:14749729 NCBI chr11:36,007,521...36,372,605
Ensembl chr11:36,007,533...36,372,744 		JBrowse link
G SLC2A8 solute carrier family 2 member 8 ISO RGD PMID:11751619 RGD:70577 NCBI chr12:10,720,266...10,731,196 JBrowse link
G SLC30A10 solute carrier family 30 member 10 NOT|located_in ISO (PMID:26728129) UniProt PMID:26728129 NCBI chr25:9,654,846...9,671,247
Ensembl chr25:9,655,129...9,668,280 		JBrowse link
G SLC30A3 solute carrier family 30 member 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:80,348,513...80,360,339
Ensembl chr14:80,355,127...80,361,544 		JBrowse link
G SLC32A1 solute carrier family 32 member 1 located_in ISO PMID:10036231
PMID:21378974		 RGD
UniProt
MGI		 PMID:10036231 PMID:18502731 PMID:19627441 PMID:21378974 RGD:10047235 RGD:151665723 RGD:2324694 RGD:9999204 NCBI chr 2:25,028,028...25,032,975
Ensembl chr 2:25,026,609...25,032,916 		JBrowse link
G SLC40A1 solute carrier family 40 member 1 located_in ISO (PMID:14972659) MGI PMID:14972659 NCBI chr10:75,076,286...75,097,742
Ensembl chr10:75,075,971...75,096,271 		JBrowse link
G SLC4A8 solute carrier family 4 member 8 located_in ISO PMID:22102085 ARUK-UCL PMID:22102085 RGD:15090838 NCBI chr11:47,622,602...47,704,975
Ensembl chr11:47,622,640...47,703,215 		JBrowse link
G SLC5A7 solute carrier family 5 member 7 ISO RGD PMID:20394050 RGD:9999388 NCBI chr14:11,346,281...11,373,754
Ensembl chr14:11,347,861...11,370,297 		JBrowse link
G SLC6A17 solute carrier family 6 member 17 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:23,337,883...23,389,513
Ensembl chr20:23,337,699...23,389,362 		JBrowse link
G SNAP25 synaptosome associated protein 25 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:27,857,093...27,944,487
Ensembl chr 2:27,858,319...27,944,496 		JBrowse link
G SNAP29 synaptosome associated protein 29 is_active_in ISO PMID:11707603 SynGO PMID:11707603 RGD:155230727 NCBI chr19:4,797,690...4,827,573
Ensembl chr19:4,797,725...4,830,251 		JBrowse link
G SNAP91 synaptosome associated protein 91 located_in ISO PMID:17640037 BHF-UCL PMID:17640037 RGD:8554206 NCBI chr13:8,221,601...8,374,205 JBrowse link
G SNAPIN SNAP associated protein is_active_in
located_in		 ISO
IEA		 PMID:10195194 SynGO
TreeGrafter
Ensembl		 PMID:10195194 GO_REF:0000107 GO_REF:0000118 RGD:13702160 NCBI chr20:10,147,577...10,150,721
Ensembl chr20:10,148,099...10,150,641 		JBrowse link
G SNCA synuclein alpha ISO RGD PMID:18001274 RGD:2291826 NCBI chr 7:38,083,154...38,194,068
Ensembl chr 7:38,081,509...38,191,479 		JBrowse link
G SPHK1 sphingosine kinase 1 ISO RGD PMID:17325039 RGD:2311366 NCBI chr16:45,290,147...45,295,175
Ensembl chr16:45,290,421...45,293,128 		JBrowse link
G SPTBN2 spectrin beta, non-erythrocytic 2 ISO RGD PMID:9704016 RGD:70020 NCBI chr 1:7,543,035...7,588,125
Ensembl chr 1:7,556,953...7,590,720 		JBrowse link
G STON2 stonin 2 located_in ISO (PMID:14726597) MGI PMID:14726597 NCBI chr24:58,588,826...58,733,645 JBrowse link
G STX11 syntaxin 11 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:29,045,674...29,084,602
Ensembl chr13:29,048,119...29,048,982 		JBrowse link
G STX12 syntaxin 12 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:104,966,763...105,020,908
Ensembl chr20:104,966,581...105,020,901 		JBrowse link
G STX19 syntaxin 19 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:86,673,139...86,688,288
Ensembl chr22:86,673,654...86,691,972 		JBrowse link
G STX1A syntaxin 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr28:9,347,495...9,367,948
Ensembl chr28:9,347,532...9,368,585 		JBrowse link
G STX1B syntaxin 1B located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:27,683,526...27,702,032
Ensembl chr 5:27,684,082...27,694,814 		JBrowse link
G STX2 syntaxin 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:126,174,446...126,225,342
Ensembl chr11:126,178,803...126,224,277 		JBrowse link
G STX7 syntaxin 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:41,029,992...41,086,589
Ensembl chr13:41,030,073...41,088,308 		JBrowse link
G STXBP5 syntaxin binding protein 5 is_active_in ISO PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr13:24,365,022...24,559,249
Ensembl chr13:24,367,627...24,559,269 		JBrowse link
G SV2A synaptic vesicle glycoprotein 2A located_in IEA Ensembl GO_REF:0000107
G SV2B synaptic vesicle glycoprotein 2B located_in ISO (PMID:12687700) RGD
MGI		 PMID:7681585 PMID:12687700 RGD:634183 NCBI chr29:9,691,421...9,875,657
Ensembl chr29:9,806,570...9,872,782 		JBrowse link
G SV2C synaptic vesicle glycoprotein 2C located_in ISO
IEA		 RGD
Ensembl		 PMID:9801366 GO_REF:0000107 RGD:634114 NCBI chr 4:70,358,164...70,601,764
Ensembl chr 4:70,358,236...70,601,242 		JBrowse link
G SVOP SV2 related protein located_in ISO PMID:9801366 HGNC-UCL PMID:9801366 RGD:634114 NCBI chr11:104,113,489...104,220,821
Ensembl chr11:104,110,374...104,220,624 		JBrowse link
G SYN2 synapsin II located_in IEA InterPro GO_REF:0000002 NCBI chr22:47,994,593...48,171,291
Ensembl chr22:48,092,452...48,171,492 		JBrowse link
G SYN3 synapsin III located_in ISO PMID:11867766 UniProt PMID:11867766 RGD:8553593 NCBI chr19:15,330,179...15,821,965 JBrowse link
G SYN3 synapsin III located_in IEA InterPro GO_REF:0000002 Ensembl chr19:15,332,790...15,414,885 JBrowse link
G SYNGR1 synaptogyrin 1 located_in ISO PMID:12928441 MGI PMID:12928441 RGD:8554439 NCBI chr19:21,924,110...21,957,453
Ensembl chr19:21,924,174...21,953,808 		JBrowse link
G SYNGR2 synaptogyrin 2 NOT|located_in ISO PMID:9446595
(PMID:12928441)		 UniProt
MGI		 PMID:9446595 PMID:12928441 RGD:634131 NCBI chr16:70,180,139...70,184,694
Ensembl chr16:70,180,093...70,183,917 		JBrowse link
G SYNGR3 synaptogyrin 3 is_active_in
located_in		 ISO
IEA		 (PMID:14755516) SynGO
Ensembl		 PMID:14755516 GO_REF:0000107 NCBI chr 5:1,886,899...1,891,293
Ensembl chr 5:1,886,864...1,891,368 		JBrowse link
G SYNPR synaptoporin located_in IEA InterPro GO_REF:0000002 NCBI chr22:24,335,530...24,666,503
Ensembl chr22:24,496,970...24,666,709 		JBrowse link
G SYP synaptophysin located_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr  X:46,287,610...46,299,926
Ensembl chr  X:46,287,282...46,299,773 		JBrowse link
G SYPL1 synaptophysin like 1 located_in IEA InterPro GO_REF:0000002 NCBI chr21:75,005,164...75,024,521
Ensembl chr21:75,003,465...75,024,758 		JBrowse link
G SYPL2 synaptophysin like 2 located_in IEA InterPro GO_REF:0000002 Ensembl chr20:24,064,774...24,080,403 JBrowse link
G SYT1 synaptotagmin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:74,442,890...75,032,756
Ensembl chr11:74,795,207...75,032,915 		JBrowse link
G SYT11 synaptotagmin 11 located_in
NOT|located_in		 ISO PMID:22960622
(PMID:30808661)		 ParkinsonsUK-UCL
UniProt		 PMID:22960622 PMID:30808661 RGD:11079184 NCBI chr20:7,993,426...8,019,256
Ensembl chr20:7,992,988...8,019,238 		JBrowse link
G SYT12 synaptotagmin 12 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,222,090...7,248,406
Ensembl chr 1:7,221,220...7,248,489 		JBrowse link
G SYT4 synaptotagmin 4 located_in
NOT|located_in		 ISO PMID:10217258
(PMID:12135783)		 ParkinsonsUK-UCL PMID:10217258 PMID:12135783 RGD:11535095 NCBI chr18:37,595,187...37,604,931
Ensembl chr18:37,595,035...37,606,007 		JBrowse link
G SYT7 synaptotagmin 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:12,267,591...12,333,181
Ensembl chr 1:12,267,685...12,333,185 		JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:15496595 PMID:19903816 RGD:1580025 RGD:5128868 NCBI chr 1:1,969,194...1,977,263
Ensembl chr 1:1,966,460...1,977,218 		JBrowse link
G TMED9 transmembrane p24 trafficking protein 9 located_in IEA Ensembl GO_REF:0000107 NCBI chr23:79,609,832...79,613,960
Ensembl chr23:79,609,826...79,614,084 		JBrowse link
G TMEM230 transmembrane protein 230 located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:32,955,522...32,968,578
Ensembl chr 2:32,955,538...32,969,152 		JBrowse link
G TOR1A torsin family 1 member A located_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,312,652...8,323,932
Ensembl chr12:8,312,650...8,322,907 		JBrowse link
G TPRG1L tumor protein p63 regulated 1 like located_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:128,057,629...128,062,545
Ensembl chr20:128,059,137...128,062,455 		JBrowse link
G TRAPPC4 trafficking protein particle complex subunit 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,389,582...110,395,135
Ensembl chr 1:110,389,914...110,394,959 		JBrowse link
G TRIM9 tripartite motif containing 9 is_active_in ISO PMID:11524423 RGD
SynGO		 PMID:11524423 RGD:631246 NCBI chr24:28,060,365...28,202,708
Ensembl chr24:28,068,601...28,185,269 		JBrowse link
G UBE3A ubiquitin protein ligase E3A is_active_in
located_in		 ISO
IEA		 (PMID:27339004) SynGO
Ensembl		 PMID:27339004 GO_REF:0000107 NCBI chr26:56,638,936...56,738,555
Ensembl chr26:56,666,162...56,736,737 		JBrowse link
G VAMP2 vesicle associated membrane protein 2 located_in ISO PMID:10908612
(PMID:15145078)		 ParkinsonsUK-UCL
MGI		 PMID:10908612 PMID:15145078 RGD:634537 NCBI chr16:7,539,098...7,542,466 JBrowse link
G VDAC1 voltage dependent anion channel 1 ISO RGD PMID:19187093 RGD:10003050 NCBI chr23:36,783,670...36,817,071 JBrowse link
G VDAC2 voltage dependent anion channel 2 ISO RGD PMID:19187093 RGD:10003050 NCBI chr 9:56,141,153...56,160,378
Ensembl chr 9:56,136,756...56,157,173 		JBrowse link
G VDAC3 voltage dependent anion channel 3 ISO RGD PMID:19187093 RGD:10003050 NCBI chr 8:40,388,485...40,402,637
Ensembl chr 8:40,388,423...40,403,598 		JBrowse link
G VPS33B VPS33B late endosome and lysosome associated is_active_in ISO PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr29:8,838,289...8,862,914
Ensembl chr29:8,838,735...8,862,977 		JBrowse link
G VPS45 vacuolar protein sorting 45 homolog is_active_in ISO PMID:23622064 SynGO PMID:23622064 RGD:13702180
G VTI1A vesicle transport through interaction with t-SNAREs 1A is_active_in ISO PMID:10908612 RGD
SynGO		 PMID:10908612 RGD:634537 NCBI chr 9:105,330,089...105,828,029
Ensembl chr 9:105,330,143...105,695,049 		JBrowse link
G VTI1B vesicle transport through interaction with t-SNAREs 1B located_in ISO PMID:10908612 ParkinsonsUK-UCL PMID:10908612 RGD:634537 NCBI chr24:44,884,082...44,907,819
Ensembl chr24:44,884,315...44,907,771 		JBrowse link
G WDR7 WD repeat domain 7 is_active_in ISO PMID:12786944 RGD
SynGO		 PMID:12786944 RGD:1354686 NCBI chr18:22,686,757...23,073,813
Ensembl chr18:22,726,258...23,073,806 		JBrowse link
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase is_active_in
located_in		 ISO
IEA		 (PMID:27075534) SynGO
Ensembl		 PMID:27075534 GO_REF:0000107 NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520 		JBrowse link
G ATP6V1A ATPase H+ transporting V1 subunit A is_active_in ISO PMID:32165585 SynGO PMID:32165585 RGD:39458019 NCBI chr22:67,049,745...67,112,971
Ensembl chr22:67,048,796...67,081,962 		JBrowse link
G ATP6V1B1 ATPase H+ transporting V1 subunit B1 is_active_in ISO PMID:23622064 SynGO PMID:23622064 RGD:13702180 NCBI chr14:36,149,074...36,179,145
Ensembl chr14:36,149,006...36,177,671 		JBrowse link
G ATP6V1B2 ATPase H+ transporting V1 subunit B2 is_active_in ISO PMID:32165585 SynGO PMID:32165585 RGD:39458019 NCBI chr 8:18,264,210...18,289,951
Ensembl chr 8:18,264,329...18,293,444 		JBrowse link
G ATP6V1C1 ATPase H+ transporting V1 subunit C1 is_active_in ISO PMID:32165585 SynGO PMID:32165585 RGD:39458019 NCBI chr 8:97,878,970...97,930,552
Ensembl chr 8:97,879,019...97,926,263 		JBrowse link
G ATP6V1D ATPase H+ transporting V1 subunit D is_active_in ISO PMID:32165585 SynGO PMID:32165585 RGD:39458019 NCBI chr24:44,578,057...44,598,918
Ensembl chr24:44,578,807...44,598,394 		JBrowse link
G ATP6V1F ATPase H+ transporting V1 subunit F is_active_in ISO PMID:32165585 SynGO PMID:32165585 RGD:39458019 NCBI chr21:97,464,741...97,467,749
Ensembl chr21:97,464,146...97,468,370 		JBrowse link
G ATP6V1G1 ATPase H+ transporting V1 subunit G1 is_active_in ISO PMID:32165585 SynGO PMID:32165585 RGD:39458019 NCBI chr12:24,994,480...25,004,618
Ensembl chr12:24,994,051...25,004,668 		JBrowse link
G ATP6V1G2 ATPase H+ transporting V1 subunit G2 is_active_in ISO PMID:32165585 SynGO PMID:32165585 RGD:39458019 NCBI chr17:40,440,321...40,442,701
Ensembl chr17:40,440,605...40,445,669 		JBrowse link
G ATP6V1H ATPase H+ transporting V1 subunit H is_active_in ISO PMID:23622064 SynGO PMID:23622064 RGD:13702180 NCBI chr 8:49,809,668...49,926,735
Ensembl chr 8:49,809,580...49,926,706 		JBrowse link
G ATR ATR serine/threonine kinase is_active_in ISO (PMID:29279380) SynGO PMID:29279380 NCBI chr15:48,048,785...48,173,120
Ensembl chr15:48,048,882...48,173,137 		JBrowse link
G BIN1 bridging integrator 1 is_active_in ISO PMID:9348539 SynGO PMID:9348539 RGD:631926 NCBI chr10:3,112,605...3,173,522
Ensembl chr10:3,113,868...3,173,620 		JBrowse link
G CLTC clathrin heavy chain is_active_in ISO PMID:1325974 SynGO PMID:1325974 RGD:13702292 NCBI chr16:33,751,641...33,826,415
Ensembl chr16:33,752,556...33,799,102 		JBrowse link
G DOC2A double C2 domain alpha is_active_in
located_in		 ISO
IEA		 PMID:9115738 SynGO
TreeGrafter		 PMID:9115738 GO_REF:0000118 RGD:1357915 NCBI chr 5:26,649,818...26,656,755
Ensembl chr 5:26,651,949...26,656,075 		JBrowse link
G DOC2B double C2 domain beta is_active_in ISO PMID:9115738 SynGO PMID:9115738 RGD:1357915 NCBI chr16:17,890...51,080
Ensembl chr16:19,294...49,309 		JBrowse link
G LOC103231893 synapsin-1 is_active_in ISO PMID:23622064
PMID:6404912
PMID:31959215		 SynGO PMID:6404912 PMID:23622064 PMID:31959215 RGD:13702180 RGD:13702282 RGD:155230771 NCBI chr  X:44,748,994...44,797,053
Ensembl chr  X:44,750,046...44,797,009 		JBrowse link
G RPH3A rabphilin 3A is_active_in
located_in		 ISO
IEA		 PMID:8060298
PMID:17110340		 SynGO
TreeGrafter		 PMID:8060298 PMID:17110340 GO_REF:0000118 RGD:12050113 RGD:13702383 NCBI chr11:107,818,594...108,155,546
Ensembl chr11:108,077,043...108,155,539 		JBrowse link
G SGTA small glutamine rich tetratricopeptide repeat co-chaperone alpha is_active_in ISO PMID:11580898 SynGO PMID:11580898 RGD:13702369 NCBI chr 6:2,534,398...2,562,306
Ensembl chr 6:2,534,376...2,548,604 		JBrowse link
G SNAP29 synaptosome associated protein 29 is_active_in ISO PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr19:4,797,690...4,827,573
Ensembl chr19:4,797,725...4,830,251 		JBrowse link
G SYN2 synapsin II is_active_in ISO PMID:23622064
PMID:2118908		 SynGO PMID:2118908 PMID:23622064 RGD:13702180 RGD:13702354 NCBI chr22:47,994,593...48,171,291
Ensembl chr22:48,092,452...48,171,492 		JBrowse link
G SYN3 synapsin III is_active_in ISO PMID:9539796
PMID:23622064		 SynGO PMID:9539796 PMID:23622064 RGD:13702156 RGD:13702180 NCBI chr19:15,330,179...15,821,965 JBrowse link
G TPRG1L tumor protein p63 regulated 1 like is_active_in ISO PMID:26212709 SynGO PMID:26212709 RGD:13792549 NCBI chr20:128,057,629...128,062,545
Ensembl chr20:128,059,137...128,062,455 		JBrowse link
synaptic vesicle lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PENK proenkephalin is_active_in ISO PMID:8847409 SynGO PMID:8847409 RGD:13702175 NCBI chr 8:52,458,113...52,463,933
Ensembl chr 8:52,457,904...52,463,859 		JBrowse link
synaptic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC8 ATP binding cassette subfamily C member 8 ISO RGD PMID:14645230 RGD:1549870 NCBI chr 1:47,494,861...47,578,818
Ensembl chr 1:47,494,959...47,578,882 		JBrowse link
G ANP32E acidic nuclear phosphoprotein 32 family member E is_active_in
located_in		 ISO
IEA		 (PMID:16420440) SynGO
Ensembl		 PMID:16420440 GO_REF:0000107
G ANXA5 annexin A5 is_active_in ISO PMID:8931014 SynGO PMID:8931014 RGD:10053658 NCBI chr 7:68,940,365...68,970,324
Ensembl chr 7:68,940,304...68,970,811 		JBrowse link
G APC APC regulator of WNT signaling pathway located_in ISO PMID:8638125 UniProt PMID:8638125 RGD:40902971 NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067 		JBrowse link
G ARPC2 actin related protein 2/3 complex subunit 2 is_active_in
located_in		 ISO
IEA		 (PMID:34269176) SynGO
Ensembl		 PMID:34269176 GO_REF:0000107 NCBI chr10:104,098,275...104,144,043
Ensembl chr10:104,098,402...104,135,791 		JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:84,985,957...85,053,923
Ensembl chr11:84,989,169...85,103,957 		JBrowse link
G ATP6AP1 ATPase H+ transporting accessory protein 1 is_active_in ISO PMID:32165585 SynGO PMID:32165585 RGD:39458019
G ATP6AP2 ATPase H+ transporting accessory protein 2 located_in
is_active_in		 IEA
ISO		 PMID:32165585 UniProt
SynGO		 PMID:32165585 GO_REF:0000044 RGD:39458019 NCBI chr  X:37,742,550...37,769,022
Ensembl chr  X:37,742,545...37,769,062 		JBrowse link
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 is_active_in
located_in		 ISO
IEA		 PMID:32165585 SynGO
UniProt		 PMID:32165585 GO_REF:0000044 RGD:39458019 NCBI chr16:63,754,523...63,818,537
Ensembl chr16:63,753,521...63,816,551 		JBrowse link
G ATP6V0A4 ATPase H+ transporting V0 subunit a4 is_active_in ISO PMID:23622064 SynGO PMID:23622064 RGD:13702180 NCBI chr21:107,407,831...107,505,300 JBrowse link
G ATP6V0C ATPase H+ transporting V0 subunit c located_in
is_active_in		 IEA
ISO		 PMID:32165585 UniProt
SynGO		 PMID:32165585 GO_REF:0000044 RGD:39458019 NCBI chr 5:2,387,891...2,394,111
Ensembl chr 5:2,387,812...2,394,180 		JBrowse link
G ATP6V0D1 ATPase H+ transporting V0 subunit d1 is_active_in ISO PMID:32165585 SynGO PMID:32165585 RGD:39458019 NCBI chr 5:59,976,118...60,018,414
Ensembl chr 5:60,002,544...60,017,894 		JBrowse link
G ATP6V1B2 ATPase H+ transporting V1 subunit B2 located_in IEA UniProt GO_REF:0000044 NCBI chr 8:18,264,210...18,289,951
Ensembl chr 8:18,264,329...18,293,444 		JBrowse link
G ATP6V1C1 ATPase H+ transporting V1 subunit C1 located_in IEA UniProt GO_REF:0000044 NCBI chr 8:97,878,970...97,930,552
Ensembl chr 8:97,879,019...97,926,263 		JBrowse link
G ATP6V1G1 ATPase H+ transporting V1 subunit G1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:24,994,480...25,004,618
Ensembl chr12:24,994,051...25,004,668 		JBrowse link
G ATP6V1G2 ATPase H+ transporting V1 subunit G2 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:40,440,321...40,442,701
Ensembl chr17:40,440,605...40,445,669 		JBrowse link
G ATP6V1G3 ATPase H+ transporting V1 subunit G3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:30,867,341...30,886,380
Ensembl chr25:30,868,161...30,886,540 		JBrowse link
G ATP8A1 ATPase phospholipid transporting 8A1 is_active_in
located_in		 ISO
IEA		 PMID:23622064
(PMID:37723322)		 SynGO
Ensembl		 PMID:23622064 PMID:37723322 GO_REF:0000107 RGD:13702180 NCBI chr27:7,667,704...7,933,337
Ensembl chr27:7,667,781...7,933,325 		JBrowse link
G BCL2L1 BCL2 like 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 2:36,059,024...36,118,332
Ensembl chr 2:36,058,919...36,116,470 		JBrowse link
G BORCS5 BLOC-1 related complex subunit 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:12,259,080...12,363,576
Ensembl chr11:12,259,495...12,364,740 		JBrowse link
G CALM1 calmodulin 1 located_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr24:68,133,446...68,145,117
Ensembl chr24:68,133,428...68,145,180 		JBrowse link
G CALM2 calmodulin 2 located_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr14:60,027,884...60,042,041
Ensembl chr14:60,027,801...60,044,951
Ensembl chr 6:60,027,801...60,044,951
Ensembl chr24:60,027,801...60,044,951 		JBrowse link
G CALM3 calmodulin 3 located_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:39,957,012...39,966,562
Ensembl chr 6:39,957,320...39,966,581
Ensembl chr24:39,957,320...39,966,581
Ensembl chr14:39,957,320...39,966,581 		JBrowse link
G CDK16 cyclin dependent kinase 16 is_active_in ISO PMID:16461345 SynGO PMID:16461345 RGD:8553541 NCBI chr  X:44,405,672...44,416,478
Ensembl chr  X:44,410,598...44,416,818 		JBrowse link
G CLCN3 chloride voltage-gated channel 3 is_active_in
located_in		 ISO
IEA		 (PMID:11182090) SynGO
Ensembl		 PMID:11182090 GO_REF:0000107 NCBI chr 7:115,826,756...115,926,842
Ensembl chr 7:115,826,778...115,928,609 		JBrowse link
G CLTA clathrin light chain A is_active_in
located_in		 ISO
IEA		 PMID:1325974 SynGO
TreeGrafter		 PMID:1325974 GO_REF:0000118 RGD:13702292 NCBI chr12:44,346,169...44,367,626
Ensembl chr12:44,344,395...44,367,619 		JBrowse link
G CLTB clathrin light chain B is_active_in
located_in		 ISO
IEA		 PMID:1325974 SynGO
TreeGrafter		 PMID:1325974 GO_REF:0000118 RGD:13702292 NCBI chr23:78,396,089...78,420,860
Ensembl chr23:78,396,413...78,420,819 		JBrowse link
G CPLX3 complexin 3 located_in
is_active_in		 IEA
ISO		 (PMID:15911881) Ensembl
SynGO		 PMID:15911881 GO_REF:0000107 NCBI chr26:8,640,661...8,649,510
Ensembl chr26:8,641,551...8,645,155 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 located_in ISO PMID:8638125 UniProt PMID:8638125 RGD:40902971 NCBI chr15:89,937,900...90,214,976
Ensembl chr15:90,055,964...90,215,652 		JBrowse link
G DLG2 discs large MAGUK scaffold protein 2 located_in ISO (PMID:29490264) MGI PMID:29490264 NCBI chr 1:74,643,873...76,869,208
Ensembl chr 1:74,648,540...75,433,146 		JBrowse link
G DMD dystrophin ISO RGD PMID:1454857 RGD:12880362 NCBI chr  X:29,543,003...32,218,011 JBrowse link
G DNAJC5 DnaJ heat shock protein family (Hsp40) member C5 is_active_in ISO PMID:11580898
PMID:7535880		 SynGO PMID:7535880 PMID:11580898 RGD:13702369 RGD:632551 NCBI chr 2:303,195...310,618
Ensembl chr 2:307,988...310,475 		JBrowse link
G DNM1L dynamin 1 like is_active_in
located_in		 ISO
IEA		 PMID:23792689 SynGO
UniProt		 PMID:23792689 GO_REF:0000044 RGD:12793033 NCBI chr11:32,114,642...32,178,330
Ensembl chr11:32,114,675...32,177,661 		JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:7623147 RGD:2311574 NCBI chr 1:104,774,632...104,843,417
Ensembl chr 1:104,774,180...104,842,736 		JBrowse link
G DTNBP1 dystrobrevin binding protein 1 located_in
is_active_in		 IEA
ISO		 (PMID:16980328) Ensembl
UniProt
SynGO
TreeGrafter		 PMID:16980328 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr17:56,500,523...56,650,925
Ensembl chr17:56,500,574...56,651,491 		JBrowse link
G GABRA2 gamma-aminobutyric acid type A receptor subunit alpha2 located_in IEA Ensembl GO_REF:0000107 NCBI chr27:3,858,741...4,013,385
Ensembl chr27:3,858,910...4,006,582 		JBrowse link
G GAD2 glutamate decarboxylase 2 ISO RGD PMID:8999827 RGD:1625237 NCBI chr 9:25,906,047...25,993,715
Ensembl chr 9:25,906,103...25,995,489 		JBrowse link
G GNAO1 G protein subunit alpha o1 is_active_in ISO PMID:12837624 SynGO PMID:12837624 RGD:405650368 NCBI chr 5:42,105,295...42,272,573
Ensembl chr 5:42,105,334...42,273,059 		JBrowse link
G GNB2 G protein subunit beta 2 is_active_in ISO PMID:12837624 SynGO PMID:12837624 RGD:405650368 NCBI chr28:12,533,667...12,539,060
Ensembl chr28:12,533,659...12,536,570 		JBrowse link
G GNG7 G protein subunit gamma 7 is_active_in ISO PMID:12837624 SynGO PMID:12837624 RGD:405650368 NCBI chr 6:2,287,339...2,485,304
Ensembl chr 6:2,287,895...2,293,067 		JBrowse link
G GPR151 G protein-coupled receptor 151 is_active_in
located_in		 ISO
IEA		 (PMID:32098843) SynGO
Ensembl		 PMID:32098843 GO_REF:0000107 NCBI chr23:49,091,582...49,096,480
Ensembl chr23:49,093,339...49,094,598 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr23:55,944,128...56,265,748
Ensembl chr23:56,101,294...56,265,849 		JBrowse link
G GRIA2 glutamate ionotropic receptor AMPA type subunit 2 located_in ISO (PMID:29490264) RGD
MGI		 PMID:12554656 PMID:29490264 RGD:728773 NCBI chr 7:103,808,789...103,957,947
Ensembl chr 7:103,808,797...103,953,040 		JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 located_in ISO (PMID:29490264) MGI PMID:29490264 NCBI chr12:1,020,556...1,050,568
Ensembl chr12:1,019,263...1,050,231 		JBrowse link
G ICA1 islet cell autoantigen 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:49,938,697...50,094,024
Ensembl chr21:49,938,503...50,093,874 		JBrowse link
G KIF1B kinesin family member 1B is_active_in ISO (PMID:11389829) UniProt PMID:11389829 NCBI chr20:121,393,478...121,567,704
Ensembl chr20:121,395,836...121,546,803 		JBrowse link
G LAMP1 lysosomal associated membrane protein 1 is_active_in ISO PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr 3:91,295,758...91,319,881
Ensembl chr 3:91,295,681...91,321,333 		JBrowse link
G LOC103219228 protein unc-13 homolog B located_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:45,230,661...45,461,934
Ensembl chr12:45,230,659...45,461,339 		JBrowse link
G LOC103221223 vesicle-associated membrane protein 2 located_in IEA UniProt GO_REF:0000044 NCBI chr15:12,164,561...12,165,161 JBrowse link
G LOC103221492 V-type proton ATPase 16 kDa proteolipid subunit-like located_in IEA UniProt GO_REF:0000044 NCBI chr17:29,424,994...29,426,571 JBrowse link
G LOC103227203 V-type proton ATPase subunit e 2 is_active_in ISO PMID:32165585 SynGO PMID:32165585 RGD:39458019 NCBI chr21:118,438,435...118,446,060
Ensembl chr21:118,439,143...118,444,214 		JBrowse link
G LOC103231893 synapsin-1 located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:44,748,994...44,797,053
Ensembl chr  X:44,750,046...44,797,009 		JBrowse link
G LOC103235294 synaptotagmin-5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:47,768,567...47,776,010
Ensembl chr 6:47,768,545...47,774,732 		JBrowse link
G LOC103241544 V-type proton ATPase subunit E 1-like located_in IEA UniProt GO_REF:0000044 NCBI chr 1:58,457,890...58,459,106
Ensembl chr19:1,808,855...1,828,040 		JBrowse link
G MAL2 mal, T cell differentiation protein 2 is_active_in ISO PMID:20053882 SynGO PMID:20053882 RGD:13702398 NCBI chr 8:113,800,325...113,830,578
Ensembl chr 8:113,800,358...113,832,534 		JBrowse link
G MCTP1 multiple C2 and transmembrane domain containing 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:88,581,761...89,174,995
Ensembl chr 4:88,585,446...88,967,701 		JBrowse link
G MCTP2 multiple C2 and transmembrane domain containing 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:12,774,874...13,034,949
Ensembl chr29:12,774,933...13,030,048 		JBrowse link
G MFF mitochondrial fission factor located_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr10:113,348,330...113,381,875
Ensembl chr10:113,348,446...113,381,162 		JBrowse link
G OPRD1 opioid receptor delta 1 is_active_in ISO PMID:7666182 SynGO PMID:7666182 RGD:13702250 NCBI chr20:103,950,505...104,002,459 JBrowse link
G OPRK1 opioid receptor kappa 1 is_active_in ISO PMID:11746715 SynGO PMID:11746715 RGD:13702363 NCBI chr 8:49,337,308...49,364,724
Ensembl chr 8:49,341,427...49,362,947 		JBrowse link
G OTOF otoferlin is_active_in
located_in		 ISO
IEA		 (PMID:17055430) SynGO
TreeGrafter		 PMID:17055430 GO_REF:0000118 NCBI chr14:81,080,077...81,187,769
Ensembl chr14:81,080,462...81,186,697 		JBrowse link
G PHAF1 phagophore assembly factor 1 located_in ISO
IEA		 RGD
TreeGrafter		 PMID:14529721 GO_REF:0000118 RGD:1302287 NCBI chr 5:60,308,832...60,346,599
Ensembl chr 5:60,306,538...60,345,714 		JBrowse link
G PHF24 PHD finger protein 24 is_active_in
located_in		 ISO
IEA		 (PMID:32306148) SynGO
Ensembl		 PMID:32306148 GO_REF:0000107 NCBI chr12:45,635,910...45,661,692
Ensembl chr12:45,635,885...45,661,446 		JBrowse link
G PI4K2A phosphatidylinositol 4-kinase type 2 alpha ISO RGD PMID:12646710 RGD:2306405 NCBI chr 9:90,805,197...90,840,047
Ensembl chr 9:90,805,086...90,834,730 		JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 is_active_in
located_in		 ISO
IEA		 (PMID:18704195) SynGO
Ensembl		 PMID:18704195 GO_REF:0000107 NCBI chr20:92,809,373...92,833,048
Ensembl chr20:92,809,552...92,833,244 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase is_active_in ISO PMID:15480834 RGD
SynGO		 PMID:11432972 PMID:15480834 RGD:10413884 RGD:1599938 NCBI chr13:88,856,056...90,329,379 JBrowse link
G PRRT1 proline rich transmembrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,879,600...39,883,173
Ensembl chr17:39,879,710...39,882,308 		JBrowse link
G PTPRN2 protein tyrosine phosphatase receptor type N2 is_active_in
located_in		 ISO PMID:23622064
(PMID:19361477)		 SynGO
UniProt		 PMID:19361477 PMID:23622064 RGD:13702180 NCBI chr21:125,655,787...126,622,503 JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S located_in ISO PMID:22519304 UniProt PMID:22519304 RGD:12790648 NCBI chr 6:4,880,942...5,019,654
Ensembl chr 6:4,882,223...4,964,919 		JBrowse link
G RAB10 RAB10, member RAS oncogene family is_active_in ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chr14:81,508,800...81,618,172
Ensembl chr14:81,507,031...81,617,983 		JBrowse link
G RAB11A RAB11A, member RAS oncogene family is_active_in ISO PMID:33376223 SynGO PMID:33376223 RGD:155230702 NCBI chr26:17,682,629...17,702,325
Ensembl chr26:17,682,874...17,702,309 		JBrowse link
G RAB11B RAB11B, member RAS oncogene family is_active_in ISO PMID:20926670
PMID:33376223		 SynGO PMID:20926670 PMID:33376223 RGD:13432355 RGD:155230702 NCBI chr 6:7,743,130...7,757,237
Ensembl chr 6:7,743,361...7,757,305 		JBrowse link
G RAB14 RAB14, member RAS oncogene family is_active_in ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chr12:18,382,118...18,406,353
Ensembl chr12:18,390,806...18,403,185 		JBrowse link
G RAB26 RAB26, member RAS oncogene family is_active_in
located_in		 ISO
IEA		 (PMID:25643395) SynGO
Ensembl		 PMID:25643395 GO_REF:0000107 NCBI chr 5:2,041,871...2,049,623
Ensembl chr 5:2,043,829...2,049,836 		JBrowse link
G RAB27B RAB27B, member RAS oncogene family located_in
is_active_in		 ISO PMID:20926670 SynGO-UCL
SynGO		 PMID:20926670 RGD:13432355 NCBI chr18:24,809,497...24,975,765
Ensembl chr18:24,814,626...24,875,818 		JBrowse link
G RAB2A RAB2A, member RAS oncogene family is_active_in ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chr 8:56,439,021...56,542,059
Ensembl chr 8:56,438,780...56,540,827 		JBrowse link
G RAB35 RAB35, member RAS oncogene family located_in
is_active_in		 ISO PMID:20926670 SynGO-UCL
SynGO		 PMID:20926670 RGD:13432355 NCBI chr11:115,447,483...115,468,964
Ensembl chr11:115,447,489...115,468,941 		JBrowse link
G RAB3A RAB3A, member RAS oncogene family located_in
is_active_in		 IEA
ISO		 PMID:17110340
(PMID:12167638)		 Ensembl
SynGO		 PMID:12167638 PMID:17110340 GO_REF:0000107 RGD:12050113 NCBI chr 6:16,671,388...16,678,780
Ensembl chr 6:16,670,431...16,678,644 		JBrowse link
G RAB3B RAB3B, member RAS oncogene family located_in
is_active_in		 IEA
ISO		 PMID:17110340
(PMID:20007772)		 Ensembl
SynGO		 PMID:17110340 PMID:20007772 GO_REF:0000107 RGD:12050113 NCBI chr20:80,963,320...81,036,058
Ensembl chr20:80,963,398...81,035,657 		JBrowse link
G RAB3C RAB3C, member RAS oncogene family is_active_in ISO PMID:8157621 SynGO PMID:8157621 RGD:13702220 NCBI chr 4:54,741,211...55,028,023 JBrowse link
G RAB4A RAB4A, member RAS oncogene family is_active_in ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chr25:66,540,462...66,574,729
Ensembl chr25:66,540,549...66,572,173 		JBrowse link
G RAB4B RAB4B, member RAS oncogene family is_active_in ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chr 6:35,231,448...35,249,080
Ensembl chr 6:35,231,490...35,251,111 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in
is_active_in		 ISO PMID:20926670 SynGO-UCL
SynGO		 PMID:20926670 RGD:13432355 NCBI chr15:64,678,910...64,715,228
Ensembl chr15:64,682,723...64,713,928 		JBrowse link
G RAB5B RAB5B, member RAS oncogene family is_active_in
located_in		 ISO PMID:20926670 SynGO
SynGO-UCL		 PMID:20926670 RGD:13432355 NCBI chr11:51,912,417...51,933,862
Ensembl chr11:51,926,016...51,931,356 		JBrowse link
G RAB5C RAB5C, member RAS oncogene family located_in
is_active_in		 ISO PMID:20926670 SynGO-UCL
SynGO		 PMID:20926670 RGD:13432355 NCBI chr16:64,115,658...64,142,905
Ensembl chr16:64,115,059...64,143,207 		JBrowse link
G RAB7A RAB7A, member RAS oncogene family is_active_in
located_in		 ISO PMID:20926670
(PMID:20926670)		 SynGO
SynGO-UCL		 PMID:20926670 RGD:13432355 NCBI chr22:52,231,481...52,309,276
Ensembl chr22:52,230,835...52,309,306 		JBrowse link
G RAC1 Rac family small GTPase 1 is_active_in ISO (PMID:34269176) SynGO PMID:34269176 NCBI chr28:15,583,609...15,610,753
Ensembl chr28:15,583,516...15,610,328 		JBrowse link
G RPH3A rabphilin 3A ISO RGD PMID:7946335 RGD:729719 NCBI chr11:107,818,594...108,155,546
Ensembl chr11:108,077,043...108,155,539 		JBrowse link
G SCAMP1 secretory carrier membrane protein 1 located_in
is_active_in		 IEA
ISO		 PMID:11050114
PMID:8404846		 Ensembl
SynGO		 PMID:8404846 PMID:11050114 GO_REF:0000107 RGD:68303 RGD:69975 NCBI chr 4:72,613,178...72,731,614
Ensembl chr 4:72,613,197...72,733,884 		JBrowse link
G SCAMP5 secretory carrier membrane protein 5 is_active_in
located_in		 ISO
IEA		 PMID:11050114 SynGO
UniProt		 PMID:11050114 GO_REF:0000044 RGD:68303 NCBI chr26:8,452,276...8,517,949 JBrowse link
G SEMA4C semaphorin 4C located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:1,189,547...1,199,906
Ensembl chr14:1,189,495...1,199,446 		JBrowse link
G SEPTIN8 septin 8 located_in IEA UniProt GO_REF:0000044 NCBI chr23:35,567,687...35,595,051
Ensembl chr23:35,567,347...35,594,588 		JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 is_active_in ISO PMID:17088211 SynGO PMID:17088211 RGD:10047209 NCBI chr12:61,862,997...62,085,254
Ensembl chr12:61,862,943...61,917,315 		JBrowse link
G SLC10A4 solute carrier family 10 member 4 is_active_in ISO (PMID:25176177) SynGO PMID:25176177 NCBI chr27:1,763,028...1,769,246
Ensembl chr27:1,762,568...1,769,056 		JBrowse link
G SLC17A5 solute carrier family 17 member 5 is_active_in
located_in		 ISO
IEA		 (PMID:18695252) SynGO
Ensembl		 PMID:18695252 GO_REF:0000107 NCBI chr17:1,499,110...1,558,954
Ensembl chr17:1,499,651...1,558,951 		JBrowse link
G SLC17A6 solute carrier family 17 member 6 is_active_in
located_in		 ISO
IEA		 PMID:18502731 SynGO
UniProt
TreeGrafter
Ensembl		 PMID:18502731 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 RGD:9999204 NCBI chr 1:42,634,754...42,677,309
Ensembl chr 1:42,636,512...42,677,165 		JBrowse link
G SLC17A7 solute carrier family 17 member 7 is_active_in
located_in		 ISO
IEA		 PMID:18502731 SynGO
UniProt
TreeGrafter		 PMID:18502731 GO_REF:0000044 GO_REF:0000118 RGD:9999204 NCBI chr 6:42,609,766...42,622,004
Ensembl chr 6:42,609,706...42,621,925 		JBrowse link
G SLC17A8 solute carrier family 17 member 8 is_active_in
located_in		 ISO
IEA		 (PMID:23633129), (PMID:32306148) SynGO
Ensembl
TreeGrafter		 PMID:23633129 PMID:32306148 GO_REF:0000107 GO_REF:0000118 NCBI chr11:95,673,205...95,740,037
Ensembl chr11:95,674,195...95,739,040 		JBrowse link
G SLC18A1 solute carrier family 18 member A1 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000118 NCBI chr 8:18,214,703...18,250,025
Ensembl chr 8:18,214,701...18,249,731 		JBrowse link
G SLC18A2 solute carrier family 18 member A2 located_in
is_active_in		 ISO
IEA		 PMID:8753875 RGD
TreeGrafter
UniProt
Ensembl
SynGO		 PMID:8753875 PMID:19038779 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 RGD:13702244 RGD:5130996 NCBI chr 9:110,039,783...110,078,822
Ensembl chr 9:110,040,391...110,076,647 		JBrowse link
G SLC18A3 solute carrier family 18 member A3 is_active_in
located_in		 ISO
IEA		 PMID:8622973
PMID:8601799		 SynGO
UniProt		 PMID:8601799 PMID:8622973 GO_REF:0000044 RGD:13702155 RGD:13702308 NCBI chr 9:42,216,187...42,219,665
Ensembl chr 9:42,216,568...42,218,166 		JBrowse link
G SLC18B1 solute carrier family 18 member B1 located_in IEA UniProt GO_REF:0000044 NCBI chr13:40,721,153...40,750,423
Ensembl chr13:40,721,186...40,750,526 		JBrowse link
G SLC22A2 solute carrier family 22 member 2 is_active_in ISO PMID:23958595 SynGO PMID:23958595 RGD:155230726 NCBI chr13:87,835,077...87,881,410
Ensembl chr13:87,833,430...87,881,081 		JBrowse link
G SLC2A3 solute carrier family 2 member 3 ISO subset of synaptic vesicles containing high concentrations of aminopeptidase B RGD PMID:10318820 RGD:1642814 NCBI chr11:8,004,861...8,023,023 JBrowse link
G SLC30A3 solute carrier family 30 member 3 located_in
is_active_in		 IEA
ISO		 (PMID:9990090) UniProt
SynGO
Ensembl		 PMID:9990090 GO_REF:0000044 GO_REF:0000107 NCBI chr14:80,348,513...80,360,339
Ensembl chr14:80,355,127...80,361,544 		JBrowse link
G SLC32A1 solute carrier family 32 member 1 is_active_in ISO PMID:18502731
PMID:9822734		 SynGO PMID:9822734 PMID:18502731 RGD:13702256 RGD:9999204 NCBI chr 2:25,028,028...25,032,975
Ensembl chr 2:25,026,609...25,032,916 		JBrowse link
G SLC35D3 solute carrier family 35 member D3 is_active_in
located_in		 ISO
IEA		 (PMID:34269178) UniProt
Ensembl		 PMID:34269178 GO_REF:0000107 NCBI chr13:36,475,017...36,478,506
Ensembl chr13:36,475,981...36,478,292 		JBrowse link
G SLC35F1 solute carrier family 35 member F1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:55,556,862...55,955,502
Ensembl chr13:55,554,744...55,719,375 		JBrowse link
G SLC35G2 solute carrier family 35 member G2 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:53,601,248...53,638,034
Ensembl chr15:53,601,657...53,602,895 		JBrowse link
G SLC4A8 solute carrier family 4 member 8 located_in ISO PMID:22102085 UniProt PMID:22102085 RGD:15090838 NCBI chr11:47,622,602...47,704,975
Ensembl chr11:47,622,640...47,703,215 		JBrowse link
G SLC5A7 solute carrier family 5 member 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:11,346,281...11,373,754
Ensembl chr14:11,347,861...11,370,297 		JBrowse link
G SLC6A17 solute carrier family 6 member 17 is_active_in ISO PMID:10103130 SynGO PMID:10103130 RGD:13702218 NCBI chr20:23,337,883...23,389,513
Ensembl chr20:23,337,699...23,389,362 		JBrowse link
G SLC6A2 solute carrier family 6 member 2 is_active_in ISO PMID:10753308 SynGO PMID:10753308 RGD:405650298 NCBI chr 5:41,434,004...41,482,568
Ensembl chr 5:41,435,387...41,483,643 		JBrowse link
G SLC6A7 solute carrier family 6 member 7 is_active_in ISO PMID:9870934 SynGO PMID:9870934 RGD:13702417 NCBI chr23:52,799,847...52,820,745
Ensembl chr23:52,800,358...52,820,732 		JBrowse link
G SLC6A9 solute carrier family 6 member 9 is_active_in ISO PMID:24036061 SynGO PMID:24036061 RGD:13702299 NCBI chr20:88,774,354...88,809,726
Ensembl chr20:88,774,339...88,808,669 		JBrowse link
G SLC9B2 solute carrier family 9 member B2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:51,125,778...51,184,426
Ensembl chr 7:51,122,794...51,183,015 		JBrowse link
G SNAPIN SNAP associated protein located_in IEA UniProt GO_REF:0000044 NCBI chr20:10,147,577...10,150,721
Ensembl chr20:10,148,099...10,150,641 		JBrowse link
G SNCA synuclein alpha located_in
is_active_in		 IEA
ISO		 (PMID:28052246) Ensembl
SynGO		 PMID:28052246 GO_REF:0000107 NCBI chr 7:38,083,154...38,194,068
Ensembl chr 7:38,081,509...38,191,479 		JBrowse link
G STX12 syntaxin 12 is_active_in
located_in		 ISO
IEA		 PMID:17004320
PMID:17110340		 SynGO
TreeGrafter		 PMID:17004320 PMID:17110340 GO_REF:0000118 RGD:12050113 RGD:12050136 NCBI chr20:104,966,763...105,020,908
Ensembl chr20:104,966,581...105,020,901 		JBrowse link
G STX16 syntaxin 16 is_active_in ISO PMID:17110340
PMID:12067063		 SynGO PMID:12067063 PMID:17110340 RGD:12050113 RGD:1299316 NCBI chr 2:5,462,910...5,489,416
Ensembl chr 2:5,460,383...5,488,693 		JBrowse link
G STX1A syntaxin 1A located_in
is_active_in		 ISO
IEA		 PMID:7860636
PMID:23622064
PMID:26903802		 RGD
UniProt
SynGO
Ensembl		 PMID:7860636 PMID:14645230 PMID:23622064 PMID:26903802 GO_REF:0000044 GO_REF:0000107 RGD:12050133 RGD:13702180 RGD:13702228 RGD:1549870 NCBI chr28:9,347,495...9,367,948
Ensembl chr28:9,347,532...9,368,585 		JBrowse link
G STX6 syntaxin 6 is_active_in ISO PMID:17110340
PMID:17004320		 SynGO PMID:17004320 PMID:17110340 RGD:12050113 RGD:12050136 NCBI chr25:48,380,359...48,427,279
Ensembl chr25:48,397,712...48,426,676 		JBrowse link
G STX7 syntaxin 7 is_active_in ISO PMID:17110340
(PMID:34408265)		 SynGO PMID:17110340 PMID:34408265 RGD:12050113 NCBI chr13:41,029,992...41,086,589
Ensembl chr13:41,030,073...41,088,308 		JBrowse link
G SV2A synaptic vesicle glycoprotein 2A located_in
is_active_in		 ISO
IEA		 PMID:23622064 RGD
UniProt
SynGO
TreeGrafter		 PMID:1519064 PMID:23622064 GO_REF:0000044 GO_REF:0000118 RGD:13702180 RGD:634182
G SV2B synaptic vesicle glycoprotein 2B located_in
is_active_in		 IEA
ISO		 PMID:23622064
PMID:22275882		 UniProt
SynGO
TreeGrafter		 PMID:22275882 PMID:23622064 GO_REF:0000044 GO_REF:0000118 RGD:13702180 RGD:155230748 NCBI chr29:9,691,421...9,875,657
Ensembl chr29:9,806,570...9,872,782 		JBrowse link
G SV2C synaptic vesicle glycoprotein 2C located_in
is_active_in		 IEA
ISO		 PMID:23622064 UniProt
TreeGrafter
SynGO		 PMID:23622064 GO_REF:0000044 GO_REF:0000118 RGD:13702180 NCBI chr 4:70,358,164...70,601,764
Ensembl chr 4:70,358,236...70,601,242 		JBrowse link
G SVOP SV2 related protein is_active_in
located_in		 ISO
IEA		 PMID:9801366 SynGO
UniProt		 PMID:9801366 GO_REF:0000044 RGD:634114 NCBI chr11:104,113,489...104,220,821
Ensembl chr11:104,110,374...104,220,624 		JBrowse link
G SYN2 synapsin II located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr22:47,994,593...48,171,291
Ensembl chr22:48,092,452...48,171,492 		JBrowse link
G SYN3 synapsin III located_in ISO (PMID:15071120) MGI PMID:15071120 NCBI chr19:15,330,179...15,821,965 JBrowse link
G SYN3 synapsin III located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr19:15,332,790...15,414,885 JBrowse link
G SYNDIG1 synapse differentiation inducing 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:53,532,455...53,682,063
Ensembl chr 2:53,533,174...53,682,056 		JBrowse link
G SYNGR1 synaptogyrin 1 is_active_in
located_in		 ISO
IEA		 PMID:17110340
PMID:2182650		 RGD
SynGO
TreeGrafter		 PMID:2182650 PMID:8557746 PMID:17110340 GO_REF:0000118 RGD:12050113 RGD:155230808 RGD:70030 NCBI chr19:21,924,110...21,957,453
Ensembl chr19:21,924,174...21,953,808 		JBrowse link
G SYNGR2 synaptogyrin 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:70,180,139...70,184,694
Ensembl chr16:70,180,093...70,183,917 		JBrowse link
G SYNGR3 synaptogyrin 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:1,886,899...1,891,293
Ensembl chr 5:1,886,864...1,891,368 		JBrowse link
G SYNGR4 synaptogyrin 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:41,622,022...41,634,032
Ensembl chr 6:41,623,402...41,633,973 		JBrowse link
G SYNPR synaptoporin is_active_in
located_in		 ISO
IEA		 PMID:2206533 SynGO
TreeGrafter		 PMID:2206533 GO_REF:0000118 RGD:13702286 NCBI chr22:24,335,530...24,666,503
Ensembl chr22:24,496,970...24,666,709 		JBrowse link
G SYP synaptophysin located_in
is_active_in		 IEA
ISO		 PMID:3923488 Ensembl
TreeGrafter
UniProt
SynGO		 PMID:3923488 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 RGD:13702387 NCBI chr  X:46,287,610...46,299,926
Ensembl chr  X:46,287,282...46,299,773 		JBrowse link
G SYPL1 synaptophysin like 1 is_active_in
located_in		 ISO
IEA		 PMID:17110340 SynGO
TreeGrafter		 PMID:17110340 GO_REF:0000118 RGD:12050113 NCBI chr21:75,005,164...75,024,521
Ensembl chr21:75,003,465...75,024,758 		JBrowse link
G SYPL2 synaptophysin like 2 located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr20:24,064,774...24,080,403 JBrowse link
G SYT1 synaptotagmin 1 located_in
is_active_in		 IEA
ISO		 PMID:7298720 UniProt
Ensembl
TreeGrafter
SynGO		 PMID:7298720 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:13702422 NCBI chr11:74,442,890...75,032,756
Ensembl chr11:74,795,207...75,032,915 		JBrowse link
G SYT11 synaptotagmin 11 is_active_in ISO PMID:22960622 SynGO PMID:22960622 RGD:11079184 NCBI chr20:7,993,426...8,019,256
Ensembl chr20:7,992,988...8,019,238 		JBrowse link
G SYT12 synaptotagmin 12 is_active_in
located_in		 ISO
IEA		 (PMID:17190793) SynGO
Ensembl		 PMID:17190793 GO_REF:0000107 NCBI chr 1:7,222,090...7,248,406
Ensembl chr 1:7,221,220...7,248,489 		JBrowse link
G SYT13 synaptotagmin 13 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:20,054,549...20,101,574
Ensembl chr 1:20,054,827...20,104,144 		JBrowse link
G SYT2 synaptotagmin 2 located_in
is_active_in		 IEA
ISO		 PMID:9867811 UniProt
TreeGrafter
SynGO		 PMID:9867811 GO_REF:0000044 GO_REF:0000104 GO_REF:0000118 RGD:13702259 NCBI chr25:26,702,627...26,821,108
Ensembl chr25:26,808,007...26,817,314 		JBrowse link
G SYT8 synaptotagmin 8 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:1,646,125...1,657,627
Ensembl chr 1:1,654,499...1,657,261 		JBrowse link
G SYT9 synaptotagmin 9 is_active_in
located_in		 ISO
IEA		 (PMID:17521570) SynGO
Ensembl		 PMID:17521570 GO_REF:0000107 NCBI chr 1:57,375,933...57,587,370
Ensembl chr 1:57,376,232...57,587,368 		JBrowse link
G TAFA4 TAFA chemokine like family member 4 is_active_in
located_in		 ISO
IEA		 (PMID:32306148) SynGO
Ensembl		 PMID:32306148 GO_REF:0000107 NCBI chr22:29,764,294...29,957,792 JBrowse link
G TMEM163 transmembrane protein 163 is_active_in
located_in		 ISO PMID:17623043
(PMID:17623043)		 SynGO
UniProt		 PMID:17623043 RGD:8553964 NCBI chr10:18,692,742...18,950,099 JBrowse link
G TMEM163 transmembrane protein 163 located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 Ensembl chr10:18,693,688...18,788,549 JBrowse link
G TMEM230 transmembrane protein 230 is_active_in ISO PMID:27270108 SynGO PMID:27270108 RGD:11342507 NCBI chr 2:32,955,522...32,968,578
Ensembl chr 2:32,955,538...32,969,152 		JBrowse link
G TRPM7 transient receptor potential cation channel subfamily M member 7 ISO RGD PMID:17088214 RGD:5684965 NCBI chr26:32,644,637...32,772,753
Ensembl chr26:32,669,187...32,771,378 		JBrowse link
G UNC13A unc-13 homolog A located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:16,082,703...16,167,165
Ensembl chr 6:16,084,168...16,154,812 		JBrowse link
G UNC13C unc-13 homolog C located_in ISO PMID:9895278 ParkinsonsUK-UCL PMID:9895278 RGD:11535093 NCBI chr26:28,806,358...29,457,039 JBrowse link
G UNC13C unc-13 homolog C located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr26:28,806,368...29,196,031 JBrowse link
G VAMP2 vesicle associated membrane protein 2 is_active_in
located_in		 ISO
IEA		 PMID:17110340
PMID:30703389		 SynGO
UniProt		 PMID:17110340 PMID:30703389 GO_REF:0000044 RGD:12050113 RGD:155230780 NCBI chr16:7,539,098...7,542,466 JBrowse link
G VAMP3 vesicle associated membrane protein 3 is_active_in ISO PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr20:123,973,672...123,984,230
Ensembl chr20:123,971,992...123,984,187 		JBrowse link
G VAMP7 vesicle associated membrane protein 7 is_active_in ISO PMID:14596849 SynGO PMID:14596849 RGD:13702238 NCBI chr  X:129,937,026...129,984,071
Ensembl chr  X:129,937,046...129,984,119 		JBrowse link
G VTI1A vesicle transport through interaction with t-SNAREs 1A is_active_in ISO PMID:12067063 SynGO PMID:12067063 RGD:1299316 NCBI chr 9:105,330,089...105,828,029
Ensembl chr 9:105,330,143...105,695,049 		JBrowse link
G WFS1 wolframin ER transmembrane glycoprotein is_active_in ISO PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr27:42,404,028...42,437,988
Ensembl chr27:42,404,084...42,438,005 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 17898
    cellular anatomical structure 17793
      presynapse 836
        synaptic vesicle 289
          synaptic vesicle lumen 1
          synaptic vesicle membrane + 173
          synaptic vesicle, readily releasable pool 0
          synaptic vesicle, recycling pool 0
          synaptic vesicle, resting pool 0
Path 2
Term Annotations click to browse term
  cellular_component 17898
    cellular anatomical structure 17793
      organelle 13138
        membrane-bounded organelle 11894
          vesicle 2067
            intracellular vesicle 1882
              cytoplasmic vesicle 1874
                secretory vesicle 695
                  exocytic vesicle 322
                    synaptic vesicle 289
                      synaptic vesicle lumen 1
                      synaptic vesicle membrane + 173
                      synaptic vesicle, readily releasable pool 0
                      synaptic vesicle, recycling pool 0
                      synaptic vesicle, resting pool 0
paths to the root