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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle
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Accession:GO:0008021 term browser browse the term
Definition:A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
Comment:This term should not be confused with GO:0097547 'synaptic vesicle protein transport vesicle'. STVs and synaptic vesicles differ both functionally and morphologically. Functionally, STVs are transport vesicles that deliver synaptic vesicle proteins to synapses, while synaptic vesicles are responsible for transmitter release at synapses. Morphologically, synaptic vesicles are very homogeneous, while STVs are very heterogeneous in size and shape. STVs might be a precursor for synaptic vesicles.
Synonyms:narrow_synonym: docked vesicle
 xref: NIF_Subcellular:sao1071221672;   Wikipedia:Synaptic_vesicle


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synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07002683.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:79,715,896...79,723,832 JBrowse link
G AABR07042936.2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07042937.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043247.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043248.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043249.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043287.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Adam10 ADAM metallopeptidase domain 10 IDA MMO:0000669, MMO:0000679 RGD PMID:26296617 RGD:13782154 NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
JBrowse link
G Amph amphiphysin located_in
is_active_in
ISO
IBA
(MGI:2176305|PMID:11879655)
PMID:21873635
RGD PMID:11879655 PMID:21873635 MGI:2176305, RGD:13792537 NCBI chr17:45,739,385...45,982,905 JBrowse link
G Anxa5 annexin A5 IDA RGD PMID:8931014 RGD:10053658 NCBI chr 2:119,314,007...119,344,703
Ensembl chr 2:119,314,007...119,353,369
JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 IDA RGD PMID:2072093 RGD:13452390 NCBI chr 1:196,652,315...196,725,609
Ensembl chr 1:196,652,337...196,725,603
JBrowse link
G Apba1 amyloid beta precursor protein binding family A member 1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:221,363,769...221,569,496
Ensembl chr 1:221,363,778...221,566,553
JBrowse link
G Apba2 amyloid beta precursor protein binding family A member 2 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:118,053,270...118,286,858
Ensembl chr 1:118,103,219...118,285,699
JBrowse link
G Aph1a aph-1 homolog A, gamma secretase subunit IDA RGD PMID:20126630 RGD:13702254 NCBI chr 2:183,437,676...183,443,113
Ensembl chr 2:183,438,434...183,441,955
JBrowse link
G App amyloid beta precursor protein NOT|located_in IDA
ISO
PMID:8987743
(MGI:5638998|PMID:25438880)
RGD PMID:25438880 PMID:8987743 MGI:5638998, RGD:8661630 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Atg9a autophagy related 9A part_of
is_active_in
EXP
IDA
PMID:23622064 SynGO PMID:23622064 PMID:23622064 PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702180 NCBI chr 9:76,677,403...76,688,035
Ensembl chr 9:76,677,404...76,687,986
JBrowse link
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 located_in IDA PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr10:85,935,802...85,989,901
Ensembl chr10:85,935,854...85,989,895
JBrowse link
G Atp6v0c ATPase H+ transporting V0 subunit C IDA RGD PMID:8567678 RGD:2301258 NCBI chr10:13,196,204...13,202,580
Ensembl chr10:13,196,204...13,201,500
JBrowse link
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 IDA RGD PMID:7961771 RGD:2301259 NCBI chr19:33,403,352...33,447,357
Ensembl chr19:33,403,355...33,447,450
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 located_in IDA PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475
JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 NOT|located_in ISO (MGI:2387737|PMID:12133826) RGD PMID:12133826 MGI:2387737 NCBI chr 5:76,961,462...76,967,642
Ensembl chr 5:76,961,499...76,969,463
JBrowse link
G Bace1 beta-secretase 1 IDA MMO:0000669, MMO:0000679 RGD PMID:26296617 RGD:13782154 NCBI chr 8:46,142,060...46,166,268
Ensembl chr 8:46,142,116...46,165,876
JBrowse link
G Bdnf brain-derived neurotrophic factor is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:17192436 PMID:21873635 RGD:1600576, RGD:13792537 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Bin1 bridging integrator 1 is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:9348539 PMID:21873635 RGD:631926, RGD:13792537 NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
JBrowse link
G Brsk1 BR serine/threonine kinase 1 located_in IDA PMID:16630837 UniProt PMID:16630837 RGD:8553864 NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365
JBrowse link
G Bsn bassoon (presynaptic cytomatrix protein) located_in IDA PMID:26212709 UniProt PMID:26212709 RGD:13792549 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819
JBrowse link
G Btbd8 BTB domain containing 8 located_in IDA PMID:29262337 UniProt PMID:29262337 RGD:13601995 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
G Cadm1 cell adhesion molecule 1 located_in ISO (MGI:2385986|PMID:12202822) RGD PMID:12202822 MGI:2385986 NCBI chr 8:47,847,836...48,178,703
Ensembl chr 8:47,847,325...48,182,833
JBrowse link
G Cadps2 calcium dependent secretion activator 2 NOT|located_in ISO (MGI:2686789|PMID:14715936) RGD PMID:14715936 MGI:2686789 NCBI chr 4:51,780,415...52,309,641
Ensembl chr 4:51,781,053...52,309,829
JBrowse link
G Cdk16 cyclin-dependent kinase 16 colocalizes_with
located_in
ISO
IDA
IEA
(MGI:5447616|PMID:16461345)
GO_REF:0000107
RGD
Ensembl
PMID:16461345 PMID:16461345 GO_REF:0000107 MGI:5447616, RGD:8553541 NCBI chr  X:1,492,814...1,504,309
Ensembl chr  X:1,492,814...1,504,148
JBrowse link
G Clcn3 chloride voltage-gated channel 3 located_in
is_active_in
IEA
IBA
IDA
ISO
GO_REF:0000107
PMID:21873635
PMID:21378974
(MGI:5604268|PMID:15073168)
(PMID:11182090)
Ensembl
RGD
PMID:11182090 PMID:15073168 PMID:21873635 PMID:21378974 GO_REF:0000107 MGI:5604268, RGD:13792537, RGD:10047235 NCBI chr16:29,127,419...29,200,133
Ensembl chr16:29,127,419...29,200,119
JBrowse link
G Clcn4 chloride voltage-gated channel 4 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:23,729,194...23,795,391
Ensembl chr  X:23,729,338...23,793,238
JBrowse link
G Clcn5 chloride voltage-gated channel 5 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:15,185,353...15,339,977
Ensembl chr  X:15,185,451...15,334,264
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin located_in ISO
ISS
(PMID:10332042), (PMID:11590129)
GO_REF:0000024
RGD
UniProt
PMID:10332042 PMID:11590129 GO_REF:0000024 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Cops4 COP9 signalosome subunit 4 located_in ISO
IDA
(PMID:21102408) RGD PMID:21102408 PMID:21102408 RGD:8554353 NCBI chr14:9,078,579...9,108,788
Ensembl chr14:9,078,576...9,108,887
JBrowse link
G Cops5 COP9 signalosome subunit 5 located_in ISO (PMID:21102408) RGD PMID:21102408 NCBI chr 5:9,192,233...9,210,498
Ensembl chr 5:9,192,100...9,210,731
JBrowse link
G Cttnbp2 cortactin binding protein 2 IDA RGD PMID:9813110 RGD:632437 NCBI chr 4:46,800,975...46,964,681
Ensembl chr 4:46,800,981...46,964,631
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IDA RGD PMID:14694190 RGD:1600839 NCBI chr 8:54,553,165...54,580,758
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein located_in IDA PMID:3819722 MGI PMID:3819722 RGD:8554614 NCBI chr13:31,241,466...31,249,853
Ensembl chr13:31,206,988...31,268,693
JBrowse link
G Ddc dopa decarboxylase IDA RGD PMID:19903816 RGD:5128868 NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208
JBrowse link
G Dgki diacylglycerol kinase, iota located_in
part_of
is_active_in
IDA PMID:21119615 MGI
SynGO
PMID:21119615 PMID:21119615 PMID:21119615 RGD:8554416, RGD:8554416, RGD:8554416 NCBI chr 4:65,410,878...65,872,733
Ensembl chr 4:65,420,108...65,872,733
JBrowse link
G Disc1 DISC1 scaffold protein located_in ISO (MGI:3823176|PMID:18983980) RGD PMID:18983980 MGI:3823176 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 located_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3623543|PMID:16520334)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:16520334 GO_REF:0000024 GO_REF:0000107 MGI:3623543 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Dmxl2 Dmx-like 2 located_in
is_active_in
part_of
ISO
IDA
(PMID:11809763) RGD PMID:11809763 PMID:11809763 PMID:11809763 RGD:11058596, RGD:11058596 NCBI chr 8:54,741,164...54,884,948
Ensembl chr 8:54,741,160...54,885,161
JBrowse link
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 located_in ISO (MGI:3613132|PMID:16407767) RGD PMID:16407767 MGI:3613132 NCBI chr 3:168,621,905...168,656,570
Ensembl chr 3:168,621,969...168,655,935
JBrowse link
G Dnm1 dynamin 1 IDA RGD PMID:12646135 RGD:8554278 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IDA RGD PMID:9593967 RGD:9685450 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 located_in IDA PMID:27626661 ARUK-UCL PMID:27626661 RGD:13601985 NCBI chr 4:152,763,664...153,055,706
Ensembl chr 4:152,767,419...153,055,639
JBrowse link
G Exoc4 exocyst complex component 4 is_active_in
part_of
IDA
EXP
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr 4:61,807,706...62,584,316
Ensembl chr 4:61,807,761...62,585,723
JBrowse link
G Gabbr1 gamma-aminobutyric acid type B receptor subunit 1 IDA RGD PMID:17924569 RGD:2315465 NCBI chr20:1,464,534...1,494,114
Ensembl chr20:1,464,534...1,493,994
JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 located_in ISO (MGI:3654775|PMID:16819522) RGD PMID:16819522 MGI:3654775 NCBI chr19:24,474,291...24,487,083
Ensembl chr19:24,453,123...24,486,997
JBrowse link
G Gnas GNAS complex locus located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 located_in ISO (MGI:4454727|PMID:20418887) RGD PMID:20418887 MGI:4454727 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 located_in ISO (MGI:4454727|PMID:20418887) RGD PMID:20418887 MGI:4454727 NCBI chr 2:165,949,379...166,069,510
Ensembl chr 2:165,947,521...166,069,510
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 located_in ISO (MGI:1859430|PMID:10846156) RGD PMID:10846156 MGI:1859430 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A located_in IEA
ISO
GO_REF:0000107
(MGI:4454727|PMID:20418887)
Ensembl
RGD
PMID:20418887 GO_REF:0000107 MGI:4454727 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B located_in ISO (MGI:1859430|PMID:10846156), (MGI:4454727|PMID:20418887) RGD PMID:10846156 PMID:20418887 MGI:1859430 MGI:4454727 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Hap1 huntingtin-associated protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IDA RGD PMID:19457116 RGD:5130974 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IDA RGD PMID:16082681 RGD:6480682 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:123,168,719...123,488,300
Ensembl chr 4:123,168,719...123,488,172
JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 colocalizes_with IDA RGD PMID:15207333 RGD:10411903 NCBI chr 2:195,063,967...195,099,233
Ensembl chr 2:195,071,769...195,099,233
JBrowse link
G Kcnk9 potassium two pore domain channel subfamily K member 9 IDA RGD PMID:15178438 RGD:2316531 NCBI chr 7:104,429,186...104,473,924
Ensembl chr 7:104,437,934...104,473,175
JBrowse link
G Kif1a kinesin family member 1A IDA RGD PMID:12522103 RGD:12911232 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480
JBrowse link
G Kif1b kinesin family member 1B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:159,607,697...159,742,778
Ensembl chr 5:159,561,271...159,742,778
JBrowse link
G Kif3c kinesin family member 3C IDA RGD PMID:9487132 RGD:729208 NCBI chr 6:26,367,092...26,406,033
Ensembl chr 6:26,366,531...26,406,130
JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 part_of ISO (PMID:25902260) RGD PMID:25902260 NCBI chr 8:32,865,779...33,407,555
Ensembl chr 8:32,862,776...33,405,676
JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 located_in ISO (MGI:5604268|PMID:15073168) RGD PMID:15073168 MGI:5604268 NCBI chr16:76,355,982...76,380,700
Ensembl chr16:76,355,984...76,381,883
JBrowse link
G Lgi3 leucine-rich repeat LGI family, member 3 located_in
is_active_in
ISO
IBA
(MGI:3817394|PMID:18760330)
PMID:21873635
RGD PMID:18760330 PMID:21873635 MGI:3817394, RGD:13792537 NCBI chr15:45,605,611...45,612,739
Ensembl chr15:45,605,611...45,612,739
JBrowse link
G LOC100910792 amphiphysin-like is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC103690878 syntaxin-3-like is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:73,695,215...73,696,108
Ensembl chr  X:73,695,215...73,696,108
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 located_in ISO (MGI:3711602|PMID:17341485) RGD PMID:17341485 MGI:3711602 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Madd MAP-kinase activating death domain IDA RGD PMID:12786944 RGD:1354686 NCBI chr 3:77,114,330...77,157,865
Ensembl chr 3:77,114,314...77,157,701
JBrowse link
G Marcksl1 MARCKS-like 1 part_of
is_active_in
IDA PMID:8557647 SynGO PMID:8557647 PMID:8557647 RGD:13702350, RGD:13702350 NCBI chr 5:141,851,491...141,853,814
Ensembl chr 5:141,850,110...141,853,817
JBrowse link
G Mff mitochondrial fission factor located_in IDA
IEA
GO_REF:0000044 UniProt PMID:23792689 GO_REF:0000044, RGD:12793033 NCBI chr 9:84,007,798...84,036,039
Ensembl chr 9:84,007,798...84,036,039
JBrowse link
G Mme membrane metallo-endopeptidase located_in ISS
ISO
GO_REF:0000024
(MGI:3604278|PMID:12074840)
UniProt
RGD
PMID:12074840 GO_REF:0000024 MGI:3604278 NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792
JBrowse link
G Mt3 metallothionein 3 located_in IDA
ISO
ISS
(MGI:68875|PMID:7931547)
GO_REF:0000024
RGD
UniProt
PMID:7931547 PMID:8911664 GO_REF:0000024 MGI:68875, RGD:9685810 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mtmr2 myotubularin related protein 2 located_in IDA PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 8:10,617,993...10,670,724
Ensembl chr 8:10,617,993...10,668,172
JBrowse link
G Mylk2 myosin light chain kinase 2 IDA RGD PMID:16515842 RGD:1600505 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728
JBrowse link
G Myo5a myosin VA IDA RGD PMID:16030255 RGD:1581734 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
JBrowse link
G Ncstn nicastrin located_in IDA
ISO
(MGI:5638998|PMID:25438880) RGD PMID:25438880 PMID:20126630 MGI:5638998, RGD:13702254 NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 located_in ISO (MGI:3823176|PMID:18983980) RGD PMID:18983980 MGI:3823176 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
JBrowse link
G Ngf nerve growth factor is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
JBrowse link
G Npy1r neuropeptide Y receptor Y1 IDA RGD PMID:11891789 RGD:1642318 NCBI chr16:23,037,788...23,047,330
Ensembl chr16:23,037,789...23,046,759
JBrowse link
G Ntf3 neurotrophin 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
JBrowse link
G Ntf4 neurotrophin 4 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:95,893,560...95,896,391
Ensembl chr 1:95,893,457...95,897,243
JBrowse link
G Pde4b phosphodiesterase 4B located_in IEA
ISO
GO_REF:0000107
(MGI:3823176|PMID:18983980)
Ensembl
RGD
PMID:18983980 GO_REF:0000107 MGI:3823176 NCBI chr 5:116,799,827...117,367,707
Ensembl chr 5:116,799,971...117,367,696
JBrowse link
G Pdyn prodynorphin is_active_in
part_of
IDA PMID:7911809 SynGO PMID:7911809 PMID:7911809 RGD:13702229, RGD:13702229 NCBI chr 3:116,900,990...116,913,334
Ensembl chr 3:116,900,992...116,913,334
JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 IDA RGD PMID:11428049 RGD:2302814 NCBI chr12:39,302,864...39,307,064
Ensembl chr12:39,302,840...39,307,862
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein located_in
is_active_in
IDA
IBA
PMID:17640037
PMID:21873635
BHF-UCL
GO_Central
PMID:17640037 PMID:21873635 RGD:8554206, RGD:13792537 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Pick1 protein interacting with PRKCA 1 located_in
is_active_in
IDA
IBA
PMID:9883737
PMID:21873635
SynGO
GO_Central
PMID:9883737 PMID:21873635 RGD:8554504, RGD:13792537 NCBI chr 7:110,796,623...110,816,850
Ensembl chr 7:110,797,117...110,816,848
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 located_in IDA
ISO
ISS
(PMID:12483688)
PMID:8895569
RGD PMID:12483688 PMID:12270687 PMID:8895569 RGD:633701, RGD:8553248 NCBI chr 5:135,121,176...135,141,076
Ensembl chr 5:135,121,163...135,142,048
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IDA RGD PMID:15480834 RGD:1599938 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Prrt2 proline-rich transmembrane protein 2 located_in ISS
ISO
GO_REF:0000024
(MGI:5792766|PMID:27052163)
UniProt
RGD
PMID:27052163 GO_REF:0000024 MGI:5792766 NCBI chr 1:181,625,243...181,628,905
Ensembl chr 1:181,604,545...181,628,850
JBrowse link
G Psen1 presenilin 1 IDA RGD PMID:20126630 RGD:13702254 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Psen2 presenilin 2 IDA RGD PMID:20126630 RGD:13702254 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Ptpn5 protein tyrosine phosphatase, non-receptor type 5 IDA RGD PMID:27103516 RGD:11574252 NCBI chr 1:97,620,638...97,681,186
Ensembl chr 1:97,620,642...97,679,882
JBrowse link
G Ptprn protein tyrosine phosphatase, receptor type, N NOT|colocalizes_with IDA PMID:8641276 UniProt PMID:8641276 RGD:10402034 NCBI chr 9:76,741,010...76,756,704
Ensembl chr 9:76,741,016...76,756,190
JBrowse link
G Rab10 RAB10, member RAS oncogene family is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
JBrowse link
G Rab11b RAB11B, member RAS oncogene family located_in IDA PMID:14627637
PMID:17110340
UniProt
SynGO
PMID:14627637 PMID:17110340 RGD:8554199, RGD:12050113 NCBI chr 7:14,521,448...14,534,589
Ensembl chr 7:14,521,368...14,534,593
JBrowse link
G Rab12 RAB12, member RAS oncogene family is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
JBrowse link
G Rab13 RAB13, member RAS oncogene family is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:175,674,894...175,680,043
Ensembl chr 2:175,675,005...175,680,036
JBrowse link
G Rab15 RAB15, member RAS oncogene family is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:95,499,584...95,524,073
Ensembl chr 6:95,499,587...95,523,942
JBrowse link
G Rab3a RAB3A, member RAS oncogene family is_active_in
located_in
IDA
IBA
ISO
PMID:21873635
(MGI:2388866|PMID:12167638), (MGI:2668269|PMID:12192047)
PMID:17110340
PMID:16141272
PMID:8617225
PMID:8043272
RGD PMID:12167638 PMID:12192047 PMID:8043272 PMID:21873635 PMID:17110340 More... MGI:2388866 MGI:2668269, RGD:2306269, RGD:13792537, RGD:12050113, RGD:8693376, RGD:14397552, RGD:2306269 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Rab3b RAB3B, member RAS oncogene family located_in
is_active_in
ISO
IBA
(MGI:2388866|PMID:12167638), (MGI:2668269|PMID:12192047)
PMID:21873635
RGD PMID:12167638 PMID:12192047 PMID:21873635 MGI:2388866 MGI:2668269, RGD:13792537 NCBI chr 5:123,629,562...123,697,410
Ensembl chr 5:123,644,423...123,697,401
JBrowse link
G Rab3c RAB3C, member RAS oncogene family located_in
is_active_in
ISO
IBA
(MGI:2388866|PMID:12167638), (MGI:2668269|PMID:12192047)
PMID:21873635
RGD PMID:12167638 PMID:12192047 PMID:21873635 MGI:2388866 MGI:2668269, RGD:13792537 NCBI chr 2:41,627,720...41,843,541
Ensembl chr 2:41,627,720...41,843,749
JBrowse link
G Rab3d RAB3D, member RAS oncogene family is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:20,438,622...20,449,269
Ensembl chr 8:20,439,294...20,449,185
JBrowse link
G Rab40b Rab40b, member RAS oncogene family is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:106,631,514...106,659,090
Ensembl chr10:106,631,514...106,659,090
JBrowse link
G Rab40c Rab40c, member RAS oncogene family is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,900,926...14,936,165
Ensembl chr10:14,900,929...14,936,557
JBrowse link
G Rab5a RAB5A, member RAS oncogene family located_in IDA PMID:8043272
PMID:17110340
RGD
ParkinsonsUK-UCL
SynGO
PMID:8043272 PMID:8043272 PMID:17110340 RGD:2306269, RGD:2306269, RGD:12050113 NCBI chr 9:6,483,906...6,512,877
Ensembl chr 9:6,484,469...6,512,873
JBrowse link
G Rab5al1 Rab5a, member RAS oncogene family-like 1 located_in IDA PMID:17110340
PMID:8043272
SynGO
ParkinsonsUK-UCL
PMID:17110340 PMID:8043272 RGD:12050113, RGD:2306269 NCBI chr14:68,332,360...68,334,470 JBrowse link
G Rab8a RAB8A, member RAS oncogene family is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Rab8b RAB8B, member RAS oncogene family is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:67,458,921...67,536,466
Ensembl chr 8:67,458,923...67,536,384
JBrowse link
G Rabac1 Rab acceptor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:80,564,029...80,567,164
Ensembl chr 1:80,564,033...80,567,163
JBrowse link
G Rnf112 ring finger protein 112 located_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5779470|PMID:26212327)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26212327 GO_REF:0000024 GO_REF:0000107 MGI:5779470 NCBI chr10:46,121,146...46,126,691
Ensembl chr10:46,121,148...46,126,699
JBrowse link
G Rogdi rogdi atypical leucine zipper located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:10,567,834...10,572,453
Ensembl chr10:10,567,834...10,572,452
JBrowse link
G Rph3a rabphilin 3A located_in IDA PMID:8617225 RGD
UniProt
PMID:14960300 PMID:8617225 PMID:11466417 RGD:2314877, RGD:14397552, RGD:2314902 NCBI chr12:35,542,389...35,618,901
Ensembl chr12:35,542,728...35,617,592
JBrowse link
G Scamp5 secretory carrier membrane protein 5 IDA RGD PMID:11050114 RGD:68303 NCBI chr 8:57,845,831...57,884,516
Ensembl chr 8:57,846,659...57,872,027
JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein is_active_in
part_of
IDA
EXP
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026
JBrowse link
G Septin1 septin 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:181,832,700...181,836,566
Ensembl chr 1:181,832,701...181,836,566
JBrowse link
G Septin2 septin 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:94,018,141...94,051,386
Ensembl chr 9:94,018,208...94,051,386
JBrowse link
G Septin4 septin 4 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:72,366,729...72,390,764
Ensembl chr10:72,366,873...72,390,768
JBrowse link
G Septin5 septin 5 is_active_in
located_in
IDA
IBA
ISO
IEA
ISS
PMID:21873635
(MGI:1926701|PMID:11064363)
GO_REF:0000002
GO_REF:0000024
(PMID:10321247)
RGD
InterPro
UniProt
PMID:10321247 PMID:11064363 PMID:10321247 PMID:21873635 GO_REF:0000002 GO_REF:0000024 MGI:1926701, RGD:1302866, RGD:13792537 NCBI chr11:82,373,601...82,379,393
Ensembl chr11:82,369,754...82,379,393
JBrowse link
G Septin6 septin 6 located_in ISO (MGI:1926701|PMID:11064363) RGD PMID:11064363 MGI:1926701 NCBI chr  X:116,153,255...116,230,334
Ensembl chr  X:116,153,255...116,230,115
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 IDA RGD PMID:18768694 RGD:13504749 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
JBrowse link
G Shh sonic hedgehog signaling molecule IDA RGD PMID:28262835 RGD:12880019 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Slc17a6 solute carrier family 17 member 6 located_in TAS
ISO
IDA
(MGI:2150836|PMID:11432869)
PMID:18502731
RGD PMID:11432869 PMID:11551935 PMID:18502731 PMID:19627441 PMID:18502731 MGI:2150836, RGD:628484, RGD:9999204, RGD:2324694, RGD:9999204 NCBI chr 1:101,212,489...101,252,543
Ensembl chr 1:101,212,489...101,252,542
JBrowse link
G Slc17a7 solute carrier family 17 member 7 located_in ISO (MGI:3603702|PMID:15579147), (MGI:5006894|PMID:21378974) RGD PMID:15579147 PMID:21378974 MGI:3603702 MGI:5006894 NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
JBrowse link
G Slc17a8 solute carrier family 17 member 8 located_in ISO (MGI:5817553|PMID:27458190) RGD PMID:27458190 MGI:5817553 NCBI chr 7:23,994,212...24,049,498
Ensembl chr 7:23,994,217...24,048,079
JBrowse link
G Slc18a2 solute carrier family 18 member A2 IDA RGD PMID:7568015 PMID:19903816 RGD:2317337, RGD:5128868 NCBI chr 1:258,413,748...258,449,143
Ensembl chr 1:258,413,959...258,448,325
JBrowse link
G Slc18a3 solute carrier family 18 member A3 IDA RGD PMID:15306235 RGD:2317428 NCBI chr16:7,713,630...7,716,491 JBrowse link
G Slc2a13 solute carrier family 2 member 13 NOT|located_in ISO (MGI:6202504|PMID:14749729) RGD PMID:14749729 MGI:6202504 NCBI chr 7:122,399,329...122,726,605
Ensembl chr 7:122,399,330...122,726,605
JBrowse link
G Slc2a8 solute carrier family 2 member 8 IDA RGD PMID:11751619 RGD:70577 NCBI chr 3:16,274,918...16,284,536
Ensembl chr 3:16,274,925...16,284,464
JBrowse link
G Slc30a3 solute carrier family 30 member 3 located_in ISS
ISO
GO_REF:0000024
(PMID:26647834)
UniProt
RGD
PMID:26647834 GO_REF:0000024 NCBI chr 6:25,264,310...25,284,720
Ensembl chr 6:25,275,528...25,284,720
JBrowse link
G Slc32a1 solute carrier family 32 member 1 located_in IDA PMID:21378974
PMID:18502731
RGD
MGI
SynGO
PMID:19627441 PMID:21378974 PMID:18502731 PMID:18502731 RGD:2324694, RGD:10047235, RGD:9999204, RGD:9999204 NCBI chr 3:147,267,373...147,271,842
Ensembl chr 3:147,267,373...147,271,844
JBrowse link
G Slc40a1 solute carrier family 40 member 1 located_in ISO (MGI:3033254|PMID:14972659) RGD PMID:14972659 MGI:3033254 NCBI chr 9:48,033,526...48,053,876
Ensembl chr 9:48,033,526...48,051,481
JBrowse link
G Slc4a8 solute carrier family 4 member 8 part_of IDA PMID:22102085 ARUK-UCL PMID:22102085 RGD:15090838 NCBI chr 7:131,861,284...131,937,963
Ensembl chr 7:131,864,102...131,931,051
JBrowse link
G Slc5a7 solute carrier family 5 member 7 IDA RGD PMID:20394050 RGD:9999388 NCBI chr 9:7,595,440...7,626,258
Ensembl chr 9:7,595,444...7,626,258
JBrowse link
G Slc6a17 solute carrier family 6 member 17 located_in
is_active_in
IDA
IBA
PMID:19147495
PMID:21873635
PMID:18768736
UniProt
GO_Central
PMID:19147495 PMID:21873635 PMID:18768736 RGD:8554196, RGD:13792537, RGD:8553691 NCBI chr 2:195,107,437...195,155,697
Ensembl chr 2:195,107,438...195,155,697
JBrowse link
G Snap25 synaptosome associated protein 25 located_in IEA
ISO
GO_REF:0000107
(MGI:5606111|PMID:24680688)
Ensembl
RGD
PMID:24680688 GO_REF:0000107 MGI:5606111 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Snap91 synaptosome associated protein 91 located_in
is_active_in
IDA
IBA
PMID:17640037
PMID:21873635
BHF-UCL
GO_Central
PMID:17640037 PMID:21873635 RGD:8554206, RGD:13792537 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Snapin SNAP-associated protein located_in
part_of
is_active_in
ISO
IDA
IBA
(PMID:21102408)
PMID:10195194
PMID:21873635
RGD PMID:21102408 PMID:10195194 PMID:10195194 PMID:21873635 RGD:13702160, RGD:13702160, RGD:13792537 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Snca synuclein alpha IDA RGD PMID:18001274 RGD:2291826 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Sphk1 sphingosine kinase 1 IDA RGD PMID:17325039 RGD:2311366 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 IDA RGD PMID:9704016 RGD:70020 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
JBrowse link
G Ston1 stonin 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:5,843,186...5,892,557
Ensembl chr 6:5,843,185...5,892,449
JBrowse link
G Ston2 stonin 2 located_in
is_active_in
ISO
IBA
(MGI:3688379|PMID:14726597)
PMID:21873635
RGD PMID:14726597 PMID:21873635 MGI:3688379, RGD:13792537 NCBI chr 6:110,567,485...110,676,376
Ensembl chr 6:110,567,485...110,676,376
JBrowse link
G Stx11 syntaxin 11 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:7,293,427...7,320,060
Ensembl chr 1:7,289,976...7,320,164
JBrowse link
G Stx12 syntaxin 12 located_in
is_active_in
IDA
IBA
PMID:17110340
PMID:21873635
SynGO
GO_Central
PMID:17110340 PMID:21873635 RGD:12050113, RGD:13792537 NCBI chr 5:145,062,978...145,092,423
Ensembl chr 5:145,063,587...145,092,377
JBrowse link
G Stx1a syntaxin 1A located_in
is_active_in
ISO
IBA
(MGI:3817394|PMID:18760330)
PMID:21873635
RGD PMID:18760330 PMID:21873635 MGI:3817394, RGD:13792537 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Stx1b syntaxin 1B is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
G Stx2 syntaxin 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:27,678,744...27,714,751
Ensembl chr12:27,689,819...27,714,751
JBrowse link
G Stx3 syntaxin 3 located_in
is_active_in
ISO
IBA
(MGI:5606111|PMID:24680688)
PMID:21873635
RGD PMID:24680688 PMID:21873635 MGI:5606111, RGD:13792537 NCBI chr 1:208,617,018...208,686,240
Ensembl chr 1:208,639,115...208,685,805
JBrowse link
G Stx4 syntaxin 4 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:182,451,108...182,459,701
Ensembl chr 1:182,451,117...182,459,979
JBrowse link
G Stx6 syntaxin 6 located_in IDA PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr13:67,332,329...67,378,580
Ensembl chr13:67,332,314...67,378,576
JBrowse link
G Stx7 syntaxin 7 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:21,197,075...21,237,320
Ensembl chr 1:21,197,075...21,237,279
JBrowse link
G Stxbp5 syntaxin binding protein 5 is_active_in
part_of
IDA
EXP
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr 1:4,182,489...4,335,271
Ensembl chr 1:4,185,529...4,335,101
JBrowse link
G Sv2a synaptic vesicle glycoprotein 2a located_in IDA
ISO
PMID:17110340
(MGI:1351123|PMID:10624962), (MGI:2657076|PMID:12687700)
RGD PMID:10624962 PMID:12687700 PMID:17110340 MGI:1351123 MGI:2657076, RGD:12050113 NCBI chr 2:183,741,455...183,757,290
Ensembl chr 2:183,741,547...183,756,927
JBrowse link
G Sv2b synaptic vesicle glycoprotein 2b located_in IDA
ISO
(MGI:2657076|PMID:12687700) RGD PMID:12687700 PMID:7681585 MGI:2657076, RGD:634183 NCBI chr 1:128,978,471...129,152,479
Ensembl chr 1:128,978,473...129,152,479
JBrowse link
G Sv2c synaptic vesicle glycoprotein 2c located_in IDA
ISO
(MGI:2657076|PMID:12687700) RGD PMID:12687700 PMID:9801366 MGI:2657076, RGD:634114 NCBI chr 2:27,232,933...27,428,479
Ensembl chr 2:27,232,933...27,428,477
JBrowse link
G Svop SV2 related protein located_in IDA PMID:9801366 HGNC-UCL PMID:9801366 RGD:634114 NCBI chr12:42,530,902...42,589,736
Ensembl chr12:42,531,032...42,590,572
JBrowse link
G Syn1 synapsin I located_in IDA PMID:17110340
PMID:11867766
SynGO
UniProt
PMID:17110340 PMID:11867766 RGD:12050113, RGD:8553593 NCBI chr  X:1,172,208...1,227,400
Ensembl chr  X:1,172,208...1,227,396
JBrowse link
G Syn2 synapsin II located_in TAS
IDA
PMID:11867766 RGD
UniProt
PMID:2506642 PMID:11867766 RGD:70028, RGD:8553593 NCBI chr 4:148,178,846...148,347,010
Ensembl chr 4:148,186,270...148,344,192
JBrowse link
G Syn3 synapsin III located_in IDA PMID:11867766 UniProt PMID:11867766 RGD:8553593 NCBI chr 7:16,216,055...17,808,790
Ensembl chr 7:17,376,372...17,808,790
JBrowse link
G Syngr1 synaptogyrin 1 located_in IDA PMID:12928441 MGI PMID:12928441 RGD:8554439 NCBI chr 7:111,635,911...111,659,341
Ensembl chr 7:111,635,918...111,659,341
JBrowse link
G Syngr2 synaptogyrin 2 located_in
NOT|located_in
IEA
ISO
IDA
GO_REF:0000107
(MGI:2681378|PMID:12928441)
PMID:9446595
Ensembl
RGD
PMID:12928441 PMID:9446595 GO_REF:0000107 MGI:2681378, RGD:634131 NCBI chr10:103,029,903...103,034,473
Ensembl chr10:103,029,917...103,034,473
JBrowse link
G Syngr3 synaptogyrin 3 is_active_in
located_in
ISO (MGI:3037241|PMID:14755516)
(MGI:3037241|PMID:14755516), (MGI:3840716|PMID:19357284)
RGD PMID:14755516 PMID:19357284 MGI:3037241 MGI:3840716 NCBI chr10:13,710,553...13,715,312
Ensembl chr10:13,704,998...13,715,669
JBrowse link
G Synpr synaptoporin located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:11,573,373...11,900,255
Ensembl chr15:11,574,231...11,900,243
JBrowse link
G Syp synaptophysin located_in IDA
ISO
PMID:17004320
PMID:12928441
(MGI:1099676|PMID:9364068), (MGI:2176305|PMID:11879655), (MGI:2385986|PMID:12202822), (MGI:3613132|PMID:16407767), (MGI:3760183|PMID:17360631), (MGI:5298278|PMID:21884692)
PMID:10908612
RGD PMID:9364068 PMID:11879655 PMID:12202822 PMID:16407767 PMID:17360631 More... MGI:1099676 MGI:2176305 MGI:2385986 MGI:3613132 MGI:3760183 MGI:5298278, RGD:12050136, RGD:8554439, RGD:634537 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
G Syt1 synaptotagmin 1 located_in IDA
ISO
PMID:17110340
(MGI:3613132|PMID:16407767), (MGI:3760183|PMID:17360631)
PMID:18179895
RGD PMID:16407767 PMID:17360631 PMID:17110340 PMID:18179895 MGI:3613132 MGI:3760183, RGD:12050113, RGD:8553826 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt11 synaptotagmin 11 NOT|located_in ISS
ISO
IDA
GO_REF:0000024
(MGI:6296681|PMID:30808661)
PMID:22960622
UniProt
RGD
PMID:30808661 PMID:22960622 GO_REF:0000024 MGI:6296681, RGD:11079184 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
G Syt12 synaptotagmin 12 colocalizes_with IDA
ISO
PMID:17190793
(MGI:6316405|PMID:17190793)
RGD PMID:17190793 PMID:17190793 MGI:6316405, RGD:10047304 NCBI chr 1:201,729,307...201,760,192
Ensembl chr 1:201,730,371...201,759,609
JBrowse link
G Syt4 synaptotagmin 4 NOT|located_in NAS
ISO
IDA
(MGI:5795827|PMID:12135783)
PMID:10217258
RGD PMID:12135783 PMID:7892240 PMID:10217258 MGI:5795827, RGD:730180, RGD:11535095 NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
JBrowse link
G Syt7 synaptotagmin 7 located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:5560382|PMID:24569478)
UniProt
RGD
PMID:24569478 PMID:21873635 GO_REF:0000024 MGI:5560382, RGD:13792537 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Th tyrosine hydroxylase IDA RGD PMID:15496595 PMID:19903816 RGD:1580025, RGD:5128868 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 located_in ISO (MGI:5638998|PMID:25438880) RGD PMID:25438880 MGI:5638998 NCBI chr17:9,029,646...9,034,160
Ensembl chr17:9,029,646...9,034,176
JBrowse link
G Tmem230 transmembrane protein 230 located_in ISS
ISO
GO_REF:0000024
(PMID:27270108)
UniProt
RGD
PMID:27270108 GO_REF:0000024 NCBI chr 3:119,473,109...119,497,617
Ensembl chr 3:119,480,735...119,497,614
JBrowse link
G Tor1a torsin family 1, member A located_in ISO
IDA
(PMID:21102408) RGD PMID:21102408 PMID:21102408 RGD:8554353 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
JBrowse link
G Tprg1l tumor protein p63 regulated 1-like located_in
is_active_in
IDA
IBA
PMID:17869247
PMID:21873635
PMID:26212709
UniProt
GO_Central
PMID:17869247 PMID:21873635 PMID:26212709 RGD:8554155, RGD:13792537, RGD:13792549 NCBI chr 5:164,722,151...164,725,358
Ensembl chr 5:164,710,285...164,725,425
JBrowse link
G Trappc4 trafficking protein particle complex subunit 4 located_in IEA
ISO
GO_REF:0000107
(MGI:1891560|PMID:11018053)
Ensembl
RGD
PMID:11018053 GO_REF:0000107 MGI:1891560 NCBI chr 8:44,729,458...44,733,285
Ensembl chr 8:44,725,331...44,733,491
JBrowse link
G Trim9 tripartite motif-containing 9 is_active_in
part_of
IDA
IMP
PMID:11524423 RGD
SynGO
PMID:11524423 PMID:11524423 PMID:11524423 PMID:11524423 PMID:11524423 RGD:631246, RGD:631246, RGD:631246, RGD:631246, RGD:631246 NCBI chr 6:88,756,824...88,856,588
Ensembl chr 6:88,757,303...88,856,542
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 located_in IDA
ISO
PMID:17110340
(MGI:3046625|PMID:15145078)
PMID:10908612
RGD PMID:15145078 PMID:17110340 PMID:10908612 MGI:3046625, RGD:12050113, RGD:634537 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 located_in
is_active_in
IDA
IBA
PMID:17004320
PMID:21873635
SynGO
GO_Central
PMID:17004320 PMID:21873635 RGD:12050136, RGD:13792537 NCBI chr13:74,919,872...74,942,791
Ensembl chr13:74,919,880...74,933,686
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 located_in IDA PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr12:16,728,477...16,764,261
Ensembl chr12:16,728,524...16,764,097
JBrowse link
G Vdac1 voltage-dependent anion channel 1 IDA RGD PMID:19187093 RGD:10003050 NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
JBrowse link
G Vdac2 voltage-dependent anion channel 2 IDA RGD PMID:19187093 RGD:10003050 NCBI chr15:2,462,877...2,476,802
Ensembl chr15:2,463,056...2,476,553
JBrowse link
G Vdac3 voltage-dependent anion channel 3 IDA RGD PMID:19187093 RGD:10003050 NCBI chr16:69,434,982...69,451,473
Ensembl chr16:69,435,005...69,451,471
JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated is_active_in
part_of
IDA
EXP
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr 1:134,223,967...134,247,232
Ensembl chr 1:134,223,949...134,246,970
JBrowse link
G Vps45 vacuolar protein sorting 45 homolog is_active_in
part_of
IDA PMID:23622064 SynGO PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr 2:183,555,919...183,616,312
Ensembl chr 2:183,555,921...183,616,295
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A IDA RGD PMID:10908612 RGD:634537 NCBI chr 1:254,356,343...254,661,854
Ensembl chr 1:254,356,429...254,661,852
JBrowse link
G Vti1a_v1 vesicle transport through interaction with t-SNAREs 1A, variant 1 located_in IDA PMID:10908612 ParkinsonsUK-UCL PMID:10908612 RGD:634537
G Vti1b vesicle transport through interaction with t-SNAREs 1B located_in IDA PMID:10908612 ParkinsonsUK-UCL PMID:10908612 RGD:634537 NCBI chr 6:97,957,700...97,976,491
Ensembl chr 6:97,961,346...97,976,465
JBrowse link
G Wdr7 WD repeat domain 7 IDA RGD PMID:12786944 RGD:1354686 NCBI chr18:57,165,482...57,448,568
Ensembl chr18:57,165,488...57,448,540
JBrowse link
anchored component of synaptic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx3 complexin 3 is_active_in
located_in
ISO (MGI:3582382|PMID:15911881) RGD PMID:15911881 MGI:3582382 NCBI chr 8:58,003,535...58,010,297
Ensembl chr 8:58,003,535...58,010,297
JBrowse link
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 is_active_in
part_of
IDA PMID:7535880
PMID:11580898
SynGO PMID:7535880 PMID:11580898 PMID:11580898 PMID:7535880 RGD:632551, RGD:13702369, RGD:13702369, RGD:632551 NCBI chr 3:168,621,905...168,656,570
Ensembl chr 3:168,621,969...168,655,935
JBrowse link
G Rab10 RAB10, member RAS oncogene family is_active_in
part_of
EXP
IDA
IMP
PMID:20926670 SynGO PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 More... RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
JBrowse link
G Rab11b RAB11B, member RAS oncogene family located_in
is_active_in
part_of
IDA
EXP
PMID:17110340
PMID:20926670
SynGO PMID:17110340 PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 RGD:12050113, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 7:14,521,448...14,534,589
Ensembl chr 7:14,521,368...14,534,593
JBrowse link
G Rab14 RAB14, member RAS oncogene family part_of
is_active_in
IDA
EXP
IMP
PMID:20926670 SynGO PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 More... RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 3:18,501,953...18,523,253
Ensembl chr 3:18,501,963...18,523,172
JBrowse link
G Rab26 RAB26, member RAS oncogene family is_active_in
part_of
ISO (PMID:25643395) RGD PMID:25643395 NCBI chr10:13,553,395...13,558,063
Ensembl chr10:13,553,395...13,558,030
JBrowse link
G Rab27b RAB27B, member RAS oncogene family located_in
part_of
is_active_in
IDA
EXP
PMID:20926670 SynGO-UCL PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr18:63,597,554...63,794,124
Ensembl chr18:63,600,937...63,757,180
JBrowse link
G Rab2a RAB2A, member RAS oncogene family is_active_in
part_of
EXP
IDA
PMID:20926670 SynGO PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 5:21,676,219...21,738,833
Ensembl chr 5:21,676,129...21,739,899
JBrowse link
G Rab35 RAB35, member RAS oncogene family located_in
part_of
is_active_in
IDA
EXP
PMID:20926670 SynGO-UCL PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr12:40,967,102...40,981,183
Ensembl chr12:40,967,103...40,991,195
JBrowse link
G Rab3a RAB3A, member RAS oncogene family located_in
is_active_in
part_of
IDA
ISO
EXP
IBA
PMID:20926670
(MGI:2388866|PMID:12167638)
PMID:17110340
PMID:21873635
RGD PMID:12167638 PMID:20926670 PMID:17110340 PMID:17110340 PMID:17110340 More... MGI:2388866, RGD:13432355, RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113, RGD:13792537, RGD:12050113 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Rab3b RAB3B, member RAS oncogene family located_in
part_of
is_active_in
IDA
EXP
ISO
PMID:20926670
PMID:17110340
(PMID:20007772)
RGD PMID:20007772 PMID:20926670 PMID:17110340 PMID:17110340 PMID:17110340 More... RGD:13432355, RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr 5:123,629,562...123,697,410
Ensembl chr 5:123,644,423...123,697,401
JBrowse link
G Rab3c RAB3C, member RAS oncogene family is_active_in
part_of
IDA PMID:8157621 SynGO PMID:8157621 PMID:8157621 RGD:13702220, RGD:13702220 NCBI chr 2:41,627,720...41,843,541
Ensembl chr 2:41,627,720...41,843,749
JBrowse link
G Rab4a RAB4A, member RAS oncogene family part_of
is_active_in
IDA PMID:20926670 SynGO PMID:20926670 PMID:20926670 RGD:13432355, RGD:13432355 NCBI chr19:51,795,613...51,822,706
Ensembl chr19:51,795,613...51,822,703
JBrowse link
G Rab4b RAB4B, member RAS oncogene family part_of
is_active_in
IMP
EXP
IDA
PMID:20926670 SynGO PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 More... RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 1:82,461,396...82,472,784
Ensembl chr 1:82,461,396...82,472,763
JBrowse link
G Rab5a RAB5A, member RAS oncogene family located_in
part_of
is_active_in
IDA
EXP
IMP
IBA
PMID:20926670
PMID:21873635
PMID:17110340
SynGO-UCL
GO_Central
PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 More... RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13792537, RGD:12050113 NCBI chr 9:6,483,906...6,512,877
Ensembl chr 9:6,484,469...6,512,873
JBrowse link
G Rab5al1 Rab5a, member RAS oncogene family-like 1 located_in
is_active_in
part_of
IDA
IBA
EXP
IMP
PMID:20926670
PMID:17110340
PMID:21873635
SynGO-UCL
GO_Central
PMID:20926670 PMID:17110340 PMID:21873635 PMID:20926670 PMID:20926670 More... RGD:13432355, RGD:12050113, RGD:13792537, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr14:68,332,360...68,334,470 JBrowse link
G Rab5b RAB5B, member RAS oncogene family located_in
part_of
is_active_in
IDA
EXP
PMID:20926670 SynGO-UCL PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 7:1,109,449...1,128,348
Ensembl chr 7:1,109,454...1,128,268
JBrowse link
G Rab5c RAB5C, member RAS oncogene family located_in
is_active_in
part_of
IDA
EXP
PMID:20926670 SynGO-UCL PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr10:85,642,553...85,666,142
Ensembl chr10:85,642,809...85,666,103
JBrowse link
G Rab7a RAB7A, member RAS oncogene family located_in
is_active_in
part_of
ISO
EXP
IDA
IMP
(PMID:20926670) RGD PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 PMID:20926670 More... RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Syn1 synapsin I located_in IDA PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr  X:1,172,208...1,227,400
Ensembl chr  X:1,172,208...1,227,396
JBrowse link
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amph amphiphysin is_active_in
part_of
IDA PMID:1628617 SynGO PMID:1628617 PMID:1628617 RGD:13702221, RGD:13702221 NCBI chr17:45,739,385...45,982,905 JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 located_in IDA PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475
JBrowse link
G Bin1 bridging integrator 1 part_of
is_active_in
IDA PMID:9348539 SynGO PMID:9348539 PMID:9348539 RGD:631926, RGD:631926 NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
JBrowse link
G Cltc clathrin heavy chain is_active_in
part_of
IDA PMID:1325974 SynGO PMID:1325974 PMID:1325974 RGD:13702292, RGD:13702292 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Doc2a double C2 domain alpha is_active_in
part_of
IDA PMID:9115738 SynGO PMID:9115738 PMID:9115738 RGD:1357915, RGD:1357915 NCBI chr 1:181,457,415...181,462,528
Ensembl chr 1:181,458,390...181,462,030
JBrowse link
G Rph3a rabphilin 3A is_active_in
part_of
EXP
IDA
PMID:17110340
PMID:8060298
SynGO PMID:17110340 PMID:17110340 PMID:8060298 PMID:17110340 PMID:17110340 More... RGD:12050113, RGD:12050113, RGD:13702383, RGD:12050113, RGD:12050113, RGD:13702383 NCBI chr12:35,542,389...35,618,901
Ensembl chr12:35,542,728...35,617,592
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha part_of
is_active_in
IDA
IMP
PMID:11580898 SynGO PMID:11580898 PMID:11580898 PMID:11580898 PMID:11580898 RGD:13702369, RGD:13702369, RGD:13702369, RGD:13702369 NCBI chr 7:8,653,681...8,670,460
Ensembl chr 7:8,653,778...8,670,458
JBrowse link
G Syn1 synapsin I part_of
is_active_in
IDA
EXP
PMID:6404912
PMID:23622064
SynGO PMID:6404912 PMID:23622064 PMID:23622064 PMID:23622064 PMID:23622064 More... RGD:13702282, RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702282 NCBI chr  X:1,172,208...1,227,400
Ensembl chr  X:1,172,208...1,227,396
JBrowse link
G Syn2 synapsin II is_active_in
part_of
IDA
EXP
IMP
PMID:23622064
PMID:2118908
SynGO PMID:23622064 PMID:23622064 PMID:23622064 PMID:2118908 PMID:23622064 More... RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702354, RGD:13702180, RGD:13702354, RGD:13702354, RGD:13702354 NCBI chr 4:148,178,846...148,347,010
Ensembl chr 4:148,186,270...148,344,192
JBrowse link
G Syn3 synapsin III is_active_in
part_of
IDA
EXP
PMID:9539796
PMID:23622064
SynGO PMID:9539796 PMID:23622064 PMID:23622064 PMID:23622064 PMID:23622064 More... RGD:13702156, RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702156 NCBI chr 7:16,216,055...17,808,790
Ensembl chr 7:17,376,372...17,808,790
JBrowse link
integral component of synaptic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 located_in ISS
ISO
GO_REF:0000024
(MGI:6695685|PMID:30862855)
UniProt
RGD
PMID:30862855 GO_REF:0000024 MGI:6695685 NCBI chr 7:33,735,595...33,845,226
Ensembl chr 7:33,735,871...33,843,295
JBrowse link
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 located_in IDA PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr10:85,935,802...85,989,901
Ensembl chr10:85,935,854...85,989,895
JBrowse link
G Atp6v1g2 ATPase H+ transporting V1 subunit G2 located_in ISO (MGI:2387737|PMID:12133826) RGD PMID:12133826 MGI:2387737 NCBI chr20:3,587,681...3,591,309
Ensembl chr20:3,587,686...3,590,481
JBrowse link
G Atp8a1 ATPase phospholipid transporting 8A1 is_active_in
part_of
IDA
EXP
PMID:23622064 SynGO PMID:23622064 PMID:23622064 PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702180 NCBI chr14:40,315,013...40,557,572
Ensembl chr14:40,315,049...40,554,611
JBrowse link
G Clcn3 chloride voltage-gated channel 3 part_of
is_active_in
ISO (PMID:11182090) RGD PMID:11182090 NCBI chr16:29,127,419...29,200,133
Ensembl chr16:29,127,419...29,200,119
JBrowse link
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha 2 located_in ISO
IEA
(PMID:8391122)
GO_REF:0000107
RGD
Ensembl
PMID:8391122 GO_REF:0000107 NCBI chr14:37,096,995...37,230,030
Ensembl chr14:37,097,279...37,228,944
JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 part_of
is_active_in
EXP
IDA
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr16:76,355,982...76,380,700
Ensembl chr16:76,355,984...76,381,883
JBrowse link
G Mal2 mal, T-cell differentiation protein 2 part_of
is_active_in
EXP
IDA
PMID:20053882 SynGO PMID:20053882 PMID:20053882 PMID:20053882 PMID:20053882 RGD:13702398, RGD:13702398, RGD:13702398, RGD:13702398 NCBI chr 7:85,900,453...85,933,433
Ensembl chr 7:85,900,453...85,933,429
JBrowse link
G Oprd1 opioid receptor, delta 1 part_of
is_active_in
IDA PMID:7666182 SynGO PMID:7666182 PMID:7666182 RGD:13702250, RGD:13702250 NCBI chr 5:144,306,188...144,340,960
Ensembl chr 5:144,306,188...144,340,960
JBrowse link
G Oprk1 opioid receptor, kappa 1 part_of
is_active_in
IDA PMID:11746715 SynGO PMID:11746715 PMID:11746715 RGD:13702363, RGD:13702363 NCBI chr 5:13,860,016...13,877,823
Ensembl chr 5:13,860,021...13,877,823
JBrowse link
G Ptprn2 protein tyrosine phosphatase, receptor type N2 part_of
is_active_in
EXP
IDA
PMID:23622064 SynGO PMID:23622064 PMID:23622064 PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702180 NCBI chr 6:137,439,572...138,191,575
Ensembl chr 6:137,439,540...138,191,575
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S located_in IDA PMID:22519304 UniProt PMID:22519304 RGD:12790648 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Scamp1 secretory carrier membrane protein 1 is_active_in
part_of
IDA PMID:11050114
PMID:8404846
SynGO PMID:11050114 PMID:11050114 PMID:8404846 PMID:8404846 RGD:68303, RGD:68303, RGD:69975, RGD:69975 NCBI chr 2:25,433,958...25,516,734
Ensembl chr 2:25,433,959...25,516,673
JBrowse link
G Scamp5 secretory carrier membrane protein 5 part_of
is_active_in
IDA PMID:11050114 SynGO PMID:11050114 PMID:11050114 RGD:68303, RGD:68303 NCBI chr 8:57,845,831...57,884,516
Ensembl chr 8:57,846,659...57,872,027
JBrowse link
G Slc10a4 solute carrier family 10, member 4 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:5913479|PMID:25176177)
Ensembl
RGD
PMID:25176177 GO_REF:0000107 MGI:5913479 NCBI chr14:35,198,509...35,203,729
Ensembl chr14:35,197,886...35,203,729
JBrowse link
G Slc17a6 solute carrier family 17 member 6 located_in
part_of
is_active_in
IDA
IBA
PMID:18502731
PMID:21873635
SynGO
GO_Central
PMID:18502731 PMID:18502731 PMID:18502731 PMID:21873635 RGD:9999204, RGD:9999204, RGD:9999204, RGD:13792537 NCBI chr 1:101,212,489...101,252,543
Ensembl chr 1:101,212,489...101,252,542
JBrowse link
G Slc17a7 solute carrier family 17 member 7 located_in
is_active_in
IDA
IBA
PMID:18502731
PMID:21873635
SynGO
GO_Central
PMID:18502731 PMID:21873635 RGD:9999204, RGD:13792537 NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
JBrowse link
G Slc17a8 solute carrier family 17 member 8 is_active_in
located_in
IBA
ISO
PMID:21873635
(MGI:5509127|PMID:23633129)
RGD PMID:23633129 PMID:21873635 MGI:5509127, RGD:13792537 NCBI chr 7:23,994,212...24,049,498
Ensembl chr 7:23,994,217...24,048,079
JBrowse link
G Slc18a2 solute carrier family 18 member A2 part_of
is_active_in
IDA PMID:8753875 SynGO PMID:8753875 PMID:8753875 RGD:13702244, RGD:13702244 NCBI chr 1:258,413,748...258,449,143
Ensembl chr 1:258,413,959...258,448,325
JBrowse link
G Slc18a3 solute carrier family 18 member A3 is_active_in
part_of
IDA PMID:8622973
PMID:8601799
SynGO PMID:8622973 PMID:8601799 PMID:8601799 PMID:8622973 RGD:13702308, RGD:13702155, RGD:13702155, RGD:13702308 NCBI chr16:7,713,630...7,716,491 JBrowse link
G Slc30a3 solute carrier family 30 member 3 is_active_in
located_in
ISO (MGI:1331244|PMID:9990090) RGD PMID:9990090 MGI:1331244 NCBI chr 6:25,264,310...25,284,720
Ensembl chr 6:25,275,528...25,284,720
JBrowse link
G Slc32a1 solute carrier family 32 member 1 located_in
is_active_in
part_of
IDA
IBA
PMID:18502731
PMID:9822734
PMID:21873635
SynGO
GO_Central
PMID:18502731 PMID:9822734 PMID:18502731 PMID:18502731 PMID:9822734 More... RGD:9999204, RGD:13702256, RGD:9999204, RGD:9999204, RGD:13702256, RGD:13792537 NCBI chr 3:147,267,373...147,271,842
Ensembl chr 3:147,267,373...147,271,844
JBrowse link
G Slc6a17 solute carrier family 6 member 17 is_active_in
part_of
IDA PMID:10103130 SynGO PMID:10103130 PMID:10103130 RGD:13702218, RGD:13702218 NCBI chr 2:195,107,437...195,155,697
Ensembl chr 2:195,107,438...195,155,697
JBrowse link
G Slc6a7 solute carrier family 6 member 7 part_of
is_active_in
IDA PMID:9870934 SynGO PMID:9870934 PMID:9870934 RGD:13702417, RGD:13702417 NCBI chr18:54,448,464...54,467,319
Ensembl chr18:54,448,464...54,467,319
JBrowse link
G Slc6a9 solute carrier family 6 member 9 part_of
is_active_in
IDA PMID:24036061 SynGO PMID:24036061 PMID:24036061 RGD:13702299, RGD:13702299 NCBI chr 5:131,374,562...131,408,733
Ensembl chr 5:131,374,542...131,408,728
JBrowse link
G Stx12 syntaxin 12 located_in
part_of
is_active_in
IDA
EXP
IBA
PMID:17110340
PMID:17004320
PMID:21873635
SynGO
GO_Central
PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 PMID:17004320 More... RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050136, RGD:12050113, RGD:12050136, RGD:13792537 NCBI chr 5:145,062,978...145,092,423
Ensembl chr 5:145,063,587...145,092,377
JBrowse link
G Stx16 syntaxin 16 part_of
is_active_in
IDA
EXP
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr 3:162,853,764...162,882,489
Ensembl chr 3:162,853,782...162,882,489
JBrowse link
G Stx1a syntaxin 1A is_active_in
part_of
IDA PMID:7860636 SynGO PMID:7860636 PMID:7860636 RGD:13702228, RGD:13702228 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Stx6 syntaxin 6 located_in
is_active_in
part_of
IDA
EXP
IBA
PMID:17110340
PMID:17004320
PMID:21873635
SynGO
GO_Central
PMID:17110340 PMID:17110340 PMID:17004320 PMID:17110340 PMID:17110340 More... RGD:12050113, RGD:12050113, RGD:12050136, RGD:12050113, RGD:12050113, RGD:12050136, RGD:12050113, RGD:13792537 NCBI chr13:67,332,329...67,378,580
Ensembl chr13:67,332,314...67,378,576
JBrowse link
G Stx7 syntaxin 7 is_active_in
part_of
IDA
EXP
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr 1:21,197,075...21,237,320
Ensembl chr 1:21,197,075...21,237,279
JBrowse link
G Sv2a synaptic vesicle glycoprotein 2a located_in
is_active_in
part_of
IDA
EXP
PMID:17110340
PMID:23622064
SynGO PMID:17110340 PMID:23622064 PMID:23622064 PMID:23622064 PMID:23622064 RGD:12050113, RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702180 NCBI chr 2:183,741,455...183,757,290
Ensembl chr 2:183,741,547...183,756,927
JBrowse link
G Sv2b synaptic vesicle glycoprotein 2b part_of
is_active_in
IDA
EXP
PMID:23622064 SynGO PMID:23622064 PMID:23622064 PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702180 NCBI chr 1:128,978,471...129,152,479
Ensembl chr 1:128,978,473...129,152,479
JBrowse link
G Sv2c synaptic vesicle glycoprotein 2c part_of
is_active_in
EXP
IDA
PMID:23622064 SynGO PMID:23622064 PMID:23622064 PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180, RGD:13702180, RGD:13702180 NCBI chr 2:27,232,933...27,428,479
Ensembl chr 2:27,232,933...27,428,477
JBrowse link
G Syngr1 synaptogyrin 1 is_active_in
part_of
EXP
IDA
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr 7:111,635,911...111,659,341
Ensembl chr 7:111,635,918...111,659,341
JBrowse link
G Synpr synaptoporin part_of
is_active_in
IDA PMID:2206533 SynGO PMID:2206533 PMID:2206533 RGD:13702286, RGD:13702286 NCBI chr15:11,573,373...11,900,255
Ensembl chr15:11,574,231...11,900,243
JBrowse link
G Syp synaptophysin part_of
is_active_in
located_in
TAS
IDA
PMID:3923488
PMID:17004320
RGD
SynGO
PMID:12453493 PMID:3923488 PMID:3923488 PMID:17004320 RGD:730209, RGD:13702387, RGD:13702387, RGD:12050136 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
G Sypl1 synaptophysin-like 1 part_of
is_active_in
EXP
IDA
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr 6:49,565,111...49,585,205
Ensembl chr 6:49,565,154...49,585,330
JBrowse link
G Syt1 synaptotagmin 1 located_in
part_of
is_active_in
IDA PMID:17110340
PMID:7298720
SynGO PMID:17110340 PMID:7298720 PMID:7298720 RGD:12050113, RGD:13702422, RGD:13702422 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt11 synaptotagmin 11 part_of
is_active_in
IDA PMID:22960622 SynGO PMID:22960622 PMID:22960622 RGD:11079184, RGD:11079184 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
G Syt2 synaptotagmin 2 part_of
is_active_in
IDA PMID:9867811 SynGO PMID:9867811 PMID:9867811 RGD:13702259, RGD:13702259 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt9 synaptotagmin 9 is_active_in
located_in
ISO (MGI:3714434|PMID:17521570) RGD PMID:17521570 MGI:3714434 NCBI chr 1:161,275,882...161,456,384
Ensembl chr 1:161,275,734...161,455,007
JBrowse link
G Tmem163 transmembrane protein 163 located_in
part_of
is_active_in
IDA
IBA
ISO
PMID:17623043
PMID:21873635
(MGI:3765392|PMID:17623043)
RGD PMID:17623043 PMID:17623043 PMID:17623043 PMID:17623043 PMID:21873635 MGI:3765392, RGD:8553964, RGD:8553964, RGD:8553964, RGD:13792537 NCBI chr13:38,967,913...39,141,664
Ensembl chr13:38,968,101...39,141,452
JBrowse link
G Vamp1 vesicle-associated membrane protein 1 part_of
is_active_in
IDA PMID:3380805 SynGO PMID:3380805 PMID:3380805 RGD:13702405, RGD:13702405 NCBI chr 4:158,012,634...158,019,350
Ensembl chr 4:158,012,663...158,019,349
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 located_in
is_active_in
part_of
IDA
EXP
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
G Vamp3 vesicle-associated membrane protein 3 part_of
is_active_in
EXP
IDA
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr 5:161,498,109...161,508,704
Ensembl chr 5:161,498,109...161,508,751
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 located_in IDA PMID:17004320 SynGO PMID:17004320 RGD:12050136 NCBI chr13:74,919,872...74,942,791
Ensembl chr13:74,919,880...74,933,686
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 located_in
part_of
is_active_in
IDA PMID:17110340
PMID:14596849
SynGO PMID:17110340 PMID:14596849 PMID:14596849 RGD:12050113, RGD:13702238, RGD:13702238 NCBI chr12:16,728,477...16,764,261
Ensembl chr12:16,728,524...16,764,097
JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein is_active_in
part_of
EXP
IDA
PMID:17110340 SynGO PMID:17110340 PMID:17110340 PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113, RGD:12050113, RGD:12050113 NCBI chr14:73,810,478...73,834,993
Ensembl chr14:73,810,404...73,835,602
JBrowse link
synaptic vesicle lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Penk proenkephalin part_of
is_active_in
IDA PMID:8847409 SynGO PMID:8847409 PMID:8847409 RGD:13702175, RGD:13702175 NCBI chr 5:17,183,799...17,189,160
Ensembl chr 5:17,183,806...17,189,129
JBrowse link
synaptic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 IDA RGD PMID:14645230 RGD:1549870 NCBI chr 1:96,598,663...96,679,495
Ensembl chr 1:96,598,647...96,679,510
JBrowse link
G AC098008.1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr 1:157,043,792...157,044,304 JBrowse link
G Apc APC regulator of WNT signaling pathway located_in IDA PMID:8638125 UniProt PMID:8638125 RGD:40902971 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G Bcl2l1 Bcl2-like 1 colocalizes_with
located_in
IDA
IEA
PMID:23792689
GO_REF:0000044
UniProt PMID:23792689 GO_REF:0000044, RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Borcs5 BLOC-1 related complex subunit 5 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:167,458,640...167,543,556
Ensembl chr 4:167,473,177...167,540,993
JBrowse link
G Bsn bassoon (presynaptic cytomatrix protein) located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819
JBrowse link
G Calm1 calmodulin 1 colocalizes_with IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
JBrowse link
G Calm2 calmodulin 2 colocalizes_with IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
JBrowse link
G Calm3 calmodulin 3 colocalizes_with IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
JBrowse link
G Clta clathrin, light chain A located_in
is_active_in
part_of
IDA
IBA
PMID:23792689
PMID:1325974
PMID:21873635
CAFA
SynGO
GO_Central
PMID:23792689 PMID:1325974 PMID:1325974 PMID:21873635 RGD:12793033, RGD:13702292, RGD:13702292, RGD:13792537 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472
JBrowse link
G Cltb clathrin, light chain B is_active_in
part_of
IBA
IDA
PMID:21873635
PMID:1325974
GO_Central
SynGO
PMID:21873635 PMID:1325974 PMID:1325974 RGD:13792537, RGD:13702292, RGD:13702292 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
G Dgki diacylglycerol kinase, iota located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:65,410,878...65,872,733
Ensembl chr 4:65,420,108...65,872,733
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 located_in IDA PMID:8638125 UniProt PMID:8638125 RGD:40902971 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 located_in ISO (MGI:6150569|PMID:29490264) RGD PMID:29490264 MGI:6150569 NCBI chr 1:144,451,653...146,503,949
Ensembl chr 1:144,451,472...146,499,475
JBrowse link
G Dmd dystrophin IDA RGD PMID:1454857 RGD:12880362 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Dnm1l dynamin 1-like part_of
is_active_in
IDA PMID:23792689 SynGO PMID:23792689 PMID:23792689 RGD:12793033, RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Drd2 dopamine receptor D2 IDA RGD PMID:7623147 RGD:2311574 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 located_in
is_active_in
IDA
ISO
IBA
ISS
PMID:19428785
(MGI:3690250|PMID:16980328)
PMID:21873635
(PMID:16980328)
GO_REF:0000024
RGD
UniProt
PMID:16980328 PMID:19428785 PMID:21873635 GO_REF:0000024 MGI:3690250, RGD:8554107, RGD:13792537 NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661
JBrowse link
G Gad2 glutamate decarboxylase 2 IDA RGD PMID:8999827 RGD:1625237 NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 located_in IEA
ISO
GO_REF:0000107
(MGI:6150569|PMID:29490264)
Ensembl
RGD
PMID:29490264 GO_REF:0000107 MGI:6150569 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 located_in IDA
ISO
(MGI:6150569|PMID:29490264) RGD PMID:29490264 PMID:12554656 MGI:6150569, RGD:728773 NCBI chr 2:165,949,379...166,069,510
Ensembl chr 2:165,947,521...166,069,510
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 located_in ISO (MGI:6150569|PMID:29490264) RGD PMID:29490264 MGI:6150569 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Ica1 islet cell autoantigen 1 located_in IEA
ISO
ISS
GO_REF:0000107
(MGI:1926685|PMID:11029035)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11029035 GO_REF:0000024 GO_REF:0000107 MGI:1926685 NCBI chr 4:36,656,475...36,804,705
Ensembl chr 4:36,656,475...36,804,298
JBrowse link
G Lamp5 lysosomal-associated membrane protein family, member 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:123,372,462...123,384,970
Ensembl chr 3:123,372,462...123,384,952
JBrowse link
G Mctp1 multiple C2 and transmembrane domain containing 1 located_in
is_active_in
IDA
IBA
PMID:26195140
PMID:21873635
UniProt
GO_Central
PMID:26195140 PMID:21873635 RGD:13210552, RGD:13792537 NCBI chr 2:6,071,408...6,761,833
Ensembl chr 2:6,065,808...6,761,833
JBrowse link
G Mctp2 multiple C2 and transmembrane domain containing 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:125,769,932...126,002,886
Ensembl chr 1:125,771,233...126,002,928
JBrowse link
G Mff mitochondrial fission factor colocalizes_with IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 9:84,007,798...84,036,039
Ensembl chr 9:84,007,798...84,036,039
JBrowse link
G Otof otoferlin located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:3692845|PMID:17055430)
UniProt
RGD
PMID:17055430 PMID:21873635 GO_REF:0000024 MGI:3692845, RGD:13792537 NCBI chr 6:25,928,018...26,024,631
Ensembl chr 6:25,928,055...26,024,631
JBrowse link
G Phaf1 phagosome assembly factor 1 is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:14529721 PMID:21873635 RGD:1302287, RGD:13792537 NCBI chr19:33,101,453...33,138,920
Ensembl chr19:33,101,490...33,138,914
JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha IDA RGD PMID:12646710 RGD:2306405 NCBI chr 1:240,902,804...240,929,234
Ensembl chr 1:240,902,855...240,929,337
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IDA RGD PMID:11432972 RGD:10413884 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Prrt1 proline-rich transmembrane protein 1 located_in ISO (MGI:6150569|PMID:29490264) RGD PMID:29490264 MGI:6150569 NCBI chr20:4,117,957...4,121,643
Ensembl chr20:4,117,957...4,121,600
JBrowse link
G Prrt2 proline-rich transmembrane protein 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:181,625,243...181,628,905
Ensembl chr 1:181,604,545...181,628,850
JBrowse link
G Ptprn2 protein tyrosine phosphatase, receptor type N2 located_in ISS
ISO
GO_REF:0000024
(MGI:3847158|PMID:19361477)
UniProt
RGD
PMID:19361477 GO_REF:0000024 MGI:3847158 NCBI chr 6:137,439,572...138,191,575
Ensembl chr 6:137,439,540...138,191,575
JBrowse link
G Rph3a rabphilin 3A IDA RGD PMID:7946335 RGD:729719 NCBI chr12:35,542,389...35,618,901
Ensembl chr12:35,542,728...35,617,592
JBrowse link
G Scamp1 secretory carrier membrane protein 1 located_in IEA
ISO
GO_REF:0000107
(MGI:2668269|PMID:12192047)
Ensembl
RGD
PMID:12192047 GO_REF:0000107 MGI:2668269 NCBI chr 2:25,433,958...25,516,734
Ensembl chr 2:25,433,959...25,516,673
JBrowse link
G Sema4c semaphorin 4C located_in ISO (MGI:4366711|PMID:11134026) RGD PMID:11134026 MGI:4366711 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
JBrowse link
G Septin8 septin 8 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:37,684,639...37,713,704
Ensembl chr10:37,684,639...37,713,174
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 is_active_in
part_of
IDA PMID:17088211 SynGO PMID:17088211 PMID:17088211 RGD:10047209, RGD:10047209 NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
JBrowse link
G Slc17a7 solute carrier family 17 member 7 located_in
part_of
is_active_in
ISO
IDA
(MGI:3576988|PMID:15860731)
PMID:18502731
RGD PMID:15860731 PMID:18502731 PMID:18502731 MGI:3576988, RGD:9999204, RGD:9999204 NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
JBrowse link
G Slc17a8 solute carrier family 17 member 8 located_in ISO (MGI:3046936|PMID:12384506) RGD PMID:12384506 MGI:3046936 NCBI chr 7:23,994,212...24,049,498
Ensembl chr 7:23,994,217...24,048,079
JBrowse link
G Slc18a1 solute carrier family 18 member A1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:20,653,268...20,687,051
Ensembl chr16:20,653,508...20,687,051
JBrowse link
G Slc18a2 solute carrier family 18 member A2 is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:19038779 PMID:21873635 RGD:5130996, RGD:13792537 NCBI chr 1:258,413,748...258,449,143
Ensembl chr 1:258,413,959...258,448,325
JBrowse link
G Slc2a3 solute carrier family 2 member 3 IDA subset of synaptic vesicles containing high concentrations of aminopeptidase B RGD PMID:10318820 RGD:1642814 NCBI chr 4:155,960,944...156,026,000
Ensembl chr 4:155,960,946...156,025,472
JBrowse link
G Slc30a3 solute carrier family 30 member 3 located_in ISO (MGI:3576988|PMID:15860731) RGD PMID:15860731 MGI:3576988 NCBI chr 6:25,264,310...25,284,720
Ensembl chr 6:25,275,528...25,284,720
JBrowse link
G Slc9b2 solute carrier family 9 member B2 located_in ISS
ISO
GO_REF:0000024
(MGI:5492253|PMID:23720317)
UniProt
RGD
PMID:23720317 GO_REF:0000024 MGI:5492253 NCBI chr 2:223,726,982...223,761,234
Ensembl chr 2:223,736,354...223,761,225
JBrowse link
G Snap47 synaptosome associated protein 47 located_in ISO (MGI:3689456|PMID:16621800) RGD PMID:16621800 MGI:3689456 NCBI chr10:44,192,886...44,234,435
Ensembl chr10:44,191,218...44,234,424
JBrowse link
G Snapin SNAP-associated protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Snca synuclein alpha located_in
is_active_in
ISO (MGI:6103308|PMID:28052246) RGD PMID:28052246 MGI:6103308 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Stx1a syntaxin 1A located_in IDA
ISO
(MGI:2664026|PMID:12805290) RGD PMID:12805290 PMID:14645230 MGI:2664026, RGD:1549870 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Sv2a synaptic vesicle glycoprotein 2a is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:1519064 PMID:21873635 RGD:634182, RGD:13792537 NCBI chr 2:183,741,455...183,757,290
Ensembl chr 2:183,741,547...183,756,927
JBrowse link
G Sv2b synaptic vesicle glycoprotein 2b is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:128,978,471...129,152,479
Ensembl chr 1:128,978,473...129,152,479
JBrowse link
G Sv2c synaptic vesicle glycoprotein 2c is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:27,232,933...27,428,479
Ensembl chr 2:27,232,933...27,428,477
JBrowse link
G Svop SV2 related protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:42,530,902...42,589,736
Ensembl chr12:42,531,032...42,590,572
JBrowse link
G Syn1 synapsin I located_in
is_active_in
ISO
IBA
(MGI:3042561|PMID:15071120)
PMID:21873635
RGD PMID:15071120 PMID:21873635 MGI:3042561, RGD:13792537 NCBI chr  X:1,172,208...1,227,400
Ensembl chr  X:1,172,208...1,227,396
JBrowse link
G Syn2 synapsin II located_in
is_active_in
ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(MGI:3042561|PMID:15071120)
GO_REF:0000107
ParkinsonsUK-UCL
RGD
Ensembl
PMID:15071120 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3042561, RGD:13792537 NCBI chr 4:148,178,846...148,347,010
Ensembl chr 4:148,186,270...148,344,192
JBrowse link
G Syn3 synapsin III located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:3042561|PMID:15071120)
Ensembl
RGD
PMID:15071120 PMID:21873635 GO_REF:0000107 MGI:3042561, RGD:13792537 NCBI chr 7:16,216,055...17,808,790
Ensembl chr 7:17,376,372...17,808,790
JBrowse link
G Syndig1 synapse differentiation inducing 1 is_active_in
located_in
IBA
ISO
PMID:21873635
(MGI:6150569|PMID:29490264)
RGD PMID:29490264 PMID:21873635 MGI:6150569, RGD:13792537 NCBI chr 3:138,030,995...138,234,646
Ensembl chr 3:138,031,769...138,198,122
JBrowse link
G Syngr1 synaptogyrin 1 is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:8557746 PMID:21873635 RGD:70030, RGD:13792537 NCBI chr 7:111,635,911...111,659,341
Ensembl chr 7:111,635,918...111,659,341
JBrowse link
G Syngr2 synaptogyrin 2 located_in
is_active_in
IDA
IBA
PMID:12928441
PMID:21873635
UniProt
GO_Central
PMID:12928441 PMID:21873635 RGD:8554439, RGD:13792537 NCBI chr10:103,029,903...103,034,473
Ensembl chr10:103,029,917...103,034,473
JBrowse link
G Syngr3 synaptogyrin 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,710,553...13,715,312
Ensembl chr10:13,704,998...13,715,669
JBrowse link
G Syngr4 synaptogyrin 4 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,358,679...96,371,840
Ensembl chr 1:96,360,456...96,371,663
JBrowse link
G Synpr synaptoporin is_active_in NAS
IBA
PMID:21873635 RGD
GO_Central
PMID:12974474 PMID:21873635 RGD:1302376, RGD:13792537 NCBI chr15:11,573,373...11,900,255
Ensembl chr15:11,574,231...11,900,243
JBrowse link
G Syp synaptophysin located_in
is_active_in
IDA
ISO
IBA
IEA
PMID:23792689
(MGI:2664026|PMID:12805290), (MGI:3042561|PMID:15071120), (MGI:6150569|PMID:29490264)
PMID:21873635
GO_REF:0000044
RGD
UniProt
PMID:12805290 PMID:15071120 PMID:29490264 PMID:23792689 PMID:21873635 GO_REF:0000044 MGI:2664026 MGI:3042561 MGI:6150569, RGD:12793033, RGD:13792537 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
G Sypl1 synaptophysin-like 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:49,565,111...49,585,205
Ensembl chr 6:49,565,154...49,585,330
JBrowse link
G Sypl2 synaptophysin-like 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:195,849,062...195,863,794
Ensembl chr 2:195,849,062...195,863,794
JBrowse link
G Syt1 synaptotagmin 1 is_active_in
located_in
TAS
IBA
ISO
IDA
PMID:21873635
(MGI:3042561|PMID:15071120)
PMID:23792689
RGD PMID:15071120 PMID:2333096 PMID:21873635 PMID:23792689 MGI:3042561, RGD:729959, RGD:13792537, RGD:12793033 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt12 synaptotagmin 12 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:201,729,307...201,760,192
Ensembl chr 1:201,730,371...201,759,609
JBrowse link
G Syt2 synaptotagmin 2 is_active_in
located_in
TAS
IBA
IEA
PMID:21873635
GO_REF:0000044
UniProt PMID:1856191 PMID:21873635 GO_REF:0000044, RGD:729949, RGD:13792537 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt5 synaptotagmin 5 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,277,351...69,285,071
Ensembl chr 1:69,277,351...69,285,067
JBrowse link
G Syt6 synaptotagmin 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:191,093,009...191,152,283
Ensembl chr 2:191,093,007...191,149,956
JBrowse link
G Syt7 synaptotagmin 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Syt8 synaptotagmin 8 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,588,126...197,593,598
Ensembl chr 1:197,590,149...197,593,504
JBrowse link
G Tprg1l tumor protein p63 regulated 1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:164,722,151...164,725,358
Ensembl chr 5:164,710,285...164,725,425
JBrowse link
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 IDA RGD PMID:17088214 RGD:5684965 NCBI chr 3:114,046,258...114,134,799
Ensembl chr 3:114,046,258...114,135,190
JBrowse link
G Unc13a unc-13 homolog A is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
G Unc13c unc-13 homolog C located_in
is_active_in
IDA
IBA
PMID:9895278
PMID:21873635
ParkinsonsUK-UCL
GO_Central
PMID:9895278 PMID:21873635 RGD:11535093, RGD:13792537 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 located_in NAS
ISO
IDA
PMID:10908612
(MGI:2668269|PMID:12192047), (MGI:3042561|PMID:15071120)
PMID:23792689
RGD PMID:12192047 PMID:15071120 PMID:10908612 PMID:23792689 MGI:2668269 MGI:3042561, RGD:634537, RGD:12793033 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:254,356,343...254,661,854
Ensembl chr 1:254,356,429...254,661,852
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20010
    cellular anatomical entity 19714
      presynapse 689
        synaptic vesicle 271
          synaptic vesicle lumen 1
          synaptic vesicle membrane + 136
          synaptic vesicle, readily releasable pool 0
          synaptic vesicle, recycling pool 0
          synaptic vesicle, resting pool 0
Path 2
Term Annotations click to browse term
  cellular_component 20010
    cellular anatomical entity 19714
      organelle 13093
        membrane-bounded organelle 11654
          vesicle 2076
            intracellular vesicle 1917
              cytoplasmic vesicle 1913
                secretory vesicle 669
                  exocytic vesicle 313
                    synaptic vesicle 271
                      synaptic vesicle lumen 1
                      synaptic vesicle membrane + 136
                      synaptic vesicle, readily releasable pool 0
                      synaptic vesicle, recycling pool 0
                      synaptic vesicle, resting pool 0
paths to the root