Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:circadian rhythm
go back to main search page
Accession:GO:0007623 term browser browse the term
Definition:Any biological process in an organism that recurs with a regularity of approximately 24 hours.
Synonyms:exact_synonym: circadian process
 related_synonym: circadian response;   response to circadian rhythm
 alt_id: GO:0050895
 xref: Wikipedia:Circadian_rhythm


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:16166080 PMID:18321474 GO_REF:0000107 GO_REF:0000118 RGD:2301031 RGD:2312676 NCBI chrNW_004936594:1,556,303...1,559,198
Ensembl chrNW_004936594:1,556,285...1,559,400
JBrowse link
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20668054 RGD:4890035 NCBI chrNW_004936763:1,225,355...1,308,257
Ensembl chrNW_004936763:1,226,482...1,297,427
JBrowse link
G Actb actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004936765:667,107...670,627
Ensembl chrNW_004936765:667,053...670,672
JBrowse link
G Adcy1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chrNW_004936478:20,310,509...20,477,506
Ensembl chrNW_004936478:20,310,503...20,456,141
JBrowse link
G Adcy6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chrNW_004936512:6,612,708...6,629,202
Ensembl chrNW_004936512:6,615,012...6,629,165
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004936578:3,168,599...3,179,369
Ensembl chrNW_004936578:3,168,331...3,171,928
JBrowse link
G Agrn agrin acts_upstream_of_or_within ISO (MGI:5495107|PMID:22520507) MGI PMID:22520507 MGI:5495107 NCBI chrNW_004936737:2,010,647...2,041,401
Ensembl chrNW_004936737:2,011,724...2,039,796
JBrowse link
G Agrp agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chrNW_004936475:17,927,991...17,929,377
Ensembl chrNW_004936475:17,927,985...17,937,147
JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:34919270 RGD:401938593 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:17,482,307...17,527,407
Ensembl chrNW_004936487:17,486,826...17,527,435
JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996
JBrowse link
G Atf5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,713,527...3,717,824
Ensembl chrNW_004936664:3,713,527...3,717,824
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2445865|PMID:12451142) MGI
Ensembl
PMID:12451142 GO_REF:0000107 MGI:2445865 NCBI chrNW_004936521:10,038,345...10,039,345
Ensembl chrNW_004936521:10,038,765...10,039,223
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (MGI:5495107|PMID:22520507) MGI PMID:22520507 MGI:5495107 NCBI chrNW_004936706:476,473...494,659
Ensembl chrNW_004936706:477,107...495,525
JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chrNW_004936565:4,694,294...4,763,661
Ensembl chrNW_004936565:4,694,281...4,763,773
JBrowse link
G Bdnf brain derived neurotrophic factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004936540:5,530,081...5,582,765
Ensembl chrNW_004936540:5,529,942...5,585,014
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,316,099...4,321,193
Ensembl chrNW_004936577:4,315,977...4,322,032
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 involved_in ISO PMID:12397359
(MGI:5574300|PMID:19786558)
UniProt PMID:12397359 PMID:19786558 MGI:5574300 RGD:625726 NCBI chrNW_004936548:1,306,939...1,314,678 JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1928563|PMID:11163178), (MGI:5923379|PMID:26945058)
(MGI:3703208|PMID:17264215)
(MGI:2179885|PMID:12024206), (MGI:2183702|PMID:12150932), (MGI:2667759|PMID:12843397), (MGI:2669067|PMID:12897057)
RGD
TreeGrafter
MGI
PMID:9735336 PMID:9878515 PMID:11163178 PMID:12024206 PMID:12150932 More... GO_REF:0000118 MGI:1928563 MGI:2179885 MGI:2183702 MGI:2667759 MGI:2669067 MGI:3703208 MGI:5923379 RGD:10043346 RGD:67927 NCBI chrNW_004936528:5,167,611...5,239,128
Ensembl chrNW_004936528:5,164,481...5,239,128
JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10864977) MGI
Ensembl
PMID:10864977 GO_REF:0000107 NCBI chrNW_004936548:181,793...241,050
Ensembl chrNW_004936548:182,075...225,856
JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chrNW_004936646:1,886,262...1,889,260 JBrowse link
G Cldn4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 NCBI chrNW_004936543:2,984,797...2,986,563
Ensembl chrNW_004936543:2,984,996...2,985,625
JBrowse link
G Clock clock circadian regulator involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2179885|PMID:12024206), (MGI:66027|PMID:8171325)
(MGI:2669067|PMID:12897057)
RGD
Ensembl
MGI
PMID:8171325 PMID:10471199 PMID:12024206 PMID:12897057 GO_REF:0000107 MGI:2179885 MGI:2669067 MGI:66027 RGD:10401879 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303
JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (MGI:5923379|PMID:26945058) MGI PMID:26945058 MGI:5923379 NCBI chrNW_004936778:515,600...530,828 JBrowse link
G Creb1 cAMP responsive element binding protein 1 involved_in ISO
IEA
RGD
Ensembl
PMID:21367864 GO_REF:0000107 RGD:7247438 NCBI chrNW_004936631:3,721,307...3,785,346
Ensembl chrNW_004936631:3,721,313...3,780,892
JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chrNW_004936574:3,478,969...3,546,738
Ensembl chrNW_004936574:3,479,060...3,548,951
JBrowse link
G Cry1 cryptochrome circadian regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179885|PMID:12024206)
(MGI:3703208|PMID:17264215)
(MGI:2667759|PMID:12843397)
MGI
Ensembl
PMID:12024206 PMID:12843397 PMID:17264215 GO_REF:0000107 MGI:2179885 MGI:2667759 MGI:3703208 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2179885|PMID:12024206)
(MGI:3703208|PMID:17264215)
RGD
Ensembl
MGI
PMID:11804325 PMID:12024206 PMID:17264215 GO_REF:0000107 MGI:2179885 MGI:3703208 RGD:632584 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480
JBrowse link
G Ddc dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chrNW_004936686:1,322,153...1,405,434
Ensembl chrNW_004936686:1,301,207...1,405,384
JBrowse link
G Ddx5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:5430667 NCBI chrNW_004936541:5,005,211...5,013,439
Ensembl chrNW_004936541:5,004,692...5,013,350
JBrowse link
G Dhx9 DExH-box helicase 9 acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:5430667 NCBI chrNW_004936481:6,896,487...6,934,938
Ensembl chrNW_004936481:6,896,359...6,935,623
JBrowse link
G Dpyd dihydropyrimidine dehydrogenase ISO RGD PMID:3202908 PMID:8504424 PMID:19628084 RGD:11251745 RGD:1599793 RGD:5133425 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273
JBrowse link
G Drd4 dopamine receptor D4 ISO RGD PMID:18778704 PMID:19482058 RGD:401960072 RGD:7175073 NCBI chrNW_004936888:468,334...471,254
Ensembl chrNW_004936888:468,403...471,205
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:5,317,109...5,423,593
Ensembl chrNW_004936500:5,316,164...5,404,353
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528
JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749
JBrowse link
G Ep300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004936646:497,783...515,247
Ensembl chrNW_004936646:498,749...513,297
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chrNW_004936472:505,751...515,375
Ensembl chrNW_004936472:505,751...514,339
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819 PMID:21367864 RGD:2293795 RGD:7247438 NCBI chrNW_004936493:4,308,683...4,327,102
Ensembl chrNW_004936493:4,304,395...4,327,179
JBrowse link
G Gnrhr gonadotropin releasing hormone receptor involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chrNW_004936582:749,016...765,189
Ensembl chrNW_004936582:749,016...765,189
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (MGI:4461092|PMID:20123978) UniProt PMID:20123978 MGI:4461092 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303
JBrowse link
G Hdac1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860
JBrowse link
G Hmgb1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004936661:1,793,791...1,806,564
Ensembl chrNW_004936661:1,793,801...1,806,579
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004936474:8,531,434...8,567,734
Ensembl chrNW_004936474:8,531,434...8,567,767
JBrowse link
G Homer1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chrNW_004936549:7,189,588...7,320,117
Ensembl chrNW_004936549:7,188,850...7,320,312
JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chrNW_004936501:7,645,007...7,729,313
Ensembl chrNW_004936501:7,644,619...7,729,323
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936601:3,569,626...3,626,782
Ensembl chrNW_004936601:3,569,544...3,626,797
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004936485:18,610,721...18,611,889
Ensembl chrNW_004936485:18,610,665...18,612,059
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747) UniProt PMID:19217292 PMID:19740747 MGI:3838062 MGI:4420353 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:8,758,098...8,759,684
Ensembl chrNW_004936474:8,758,030...8,759,823
JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chrNW_004936492:11,709,623...11,784,028
Ensembl chrNW_004936492:11,709,222...11,778,351
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:748,777...753,582
Ensembl chrNW_004936529:745,511...753,581
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350
JBrowse link
G Kcnh7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chrNW_004936469:16,221,750...16,674,526
Ensembl chrNW_004936469:16,222,005...16,691,596
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:3654773 NCBI chrNW_004936521:2,000,113...2,706,010
Ensembl chrNW_004936521:2,000,109...2,705,365
JBrowse link
G Klf10 KLF transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:40,980,487...40,986,880
Ensembl chrNW_004936470:40,980,487...40,986,885
JBrowse link
G Klf9 KLF transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:6,517,748...6,553,532
Ensembl chrNW_004936503:6,517,687...6,548,336
JBrowse link
G Lep leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:5,752,319...5,846,074
Ensembl chrNW_004936540:5,752,197...5,845,159
JBrowse link
G Lipc lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chrNW_004936471:19,604,083...19,733,721
Ensembl chrNW_004936471:19,703,236...19,733,686
JBrowse link
G LOC101955077 cytochrome P450 7B1 ISO RGD PMID:12759897 RGD:1298869 NCBI chrNW_004936496:8,900,320...9,072,109
Ensembl chrNW_004936496:8,899,965...9,072,089
JBrowse link
G LOC101960714 cone-rod homeobox protein ISO RGD PMID:9465110 RGD:1600977 NCBI chrNW_004936664:1,408,618...1,419,096
Ensembl chrNW_004936664:1,409,229...1,419,234
JBrowse link
G LOC101969407 nicotinamide phosphoribosyltransferase-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,730,169...5,731,985 JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chrNW_004936712:1,710,513...1,717,339
Ensembl chrNW_004936712:1,709,716...1,717,499
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5527005|PMID:24209618) UniProt PMID:24209618 MGI:5527005 NCBI chrNW_004936880:646,835...661,312
Ensembl chrNW_004936880:644,079...661,544
JBrowse link
G Mtnr1a melatonin receptor 1A ISO RGD PMID:23895529 RGD:9686056 NCBI chrNW_004936554:3,013,106...3,047,171
Ensembl chrNW_004936554:3,013,050...3,047,179
JBrowse link
G Mttp microsomal triglyceride transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,337,726...3,417,818
Ensembl chrNW_004936520:3,338,881...3,381,627
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in ISO
IEA
RGD
Ensembl
PMID:26547053 GO_REF:0000107 RGD:13781893 NCBI chrNW_004936479:17,682,070...17,716,713
Ensembl chrNW_004936479:17,682,201...17,716,661
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454
JBrowse link
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:4,794,701...4,825,696
Ensembl chrNW_004936606:4,794,749...4,825,570
JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936796:367,461...369,469
Ensembl chrNW_004936796:367,759...369,150
JBrowse link
G Ngf nerve growth factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004936627:635,784...641,290
Ensembl chrNW_004936627:635,788...645,364
JBrowse link
G Ngfr nerve growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,038,500...12,057,257
Ensembl chrNW_004936490:12,035,769...12,057,263
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chrNW_004936494:10,517,488...10,520,567
Ensembl chrNW_004936494:10,517,488...10,520,566
JBrowse link
G Noct nocturnin involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936535:8,504,518...8,509,376
Ensembl chrNW_004936535:8,505,834...8,507,928
JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chrNW_004936762:322,413...343,126
Ensembl chrNW_004936762:321,280...341,537
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (MGI:5559671|PMID:14645221) UniProt PMID:14645221 MGI:5559671 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097
JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:11,316,857...11,319,669
Ensembl chrNW_004936474:11,316,700...11,319,669
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2183702|PMID:12150932) RGD
Ensembl
MGI
PMID:12150932 PMID:24144766 GO_REF:0000107 MGI:2183702 RGD:10448984 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chrNW_004936504:10,960,069...11,056,834
Ensembl chrNW_004936504:10,959,192...11,056,856
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936505:7,886,327...7,966,969
Ensembl chrNW_004936505:7,884,724...7,966,928
JBrowse link
G Nrxn1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:6,002,168...6,021,690
Ensembl chrNW_004936580:6,002,120...6,021,709
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936680:267,850...621,467
Ensembl chrNW_004936680:267,596...615,928
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004936483:13,912,904...14,291,881
Ensembl chrNW_004936483:13,909,109...14,291,887
JBrowse link
G Pax4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chrNW_004936479:14,807,503...14,812,575
Ensembl chrNW_004936479:14,807,538...14,812,575
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chrNW_004936471:6,809,181...6,834,189
Ensembl chrNW_004936471:6,809,195...6,836,169
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO
IEA
RGD
UniProt
Ensembl
PMID:11122332 PMID:12176169 GO_REF:0000107 GO_REF:0000117 RGD:1299576 RGD:631234 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170
JBrowse link
G Per2 period circadian regulator 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2667759|PMID:12843397) RGD
UniProt
MGI
PMID:9765215 PMID:9878515 PMID:12843397 GO_REF:0000117 MGI:2667759 RGD:10043346 RGD:61691 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295
JBrowse link
G Per3 period circadian regulator 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2667759|PMID:12843397) MGI
UniProt
Ensembl
PMID:12843397 GO_REF:0000107 GO_REF:0000117 MGI:2667759 NCBI chrNW_004936623:2,291,211...2,362,693
Ensembl chrNW_004936623:2,290,614...2,336,634
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chrNW_004936497:2,467,776...2,683,794
Ensembl chrNW_004936497:2,467,684...2,683,799
JBrowse link
G Prf1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chrNW_004936521:8,057,874...8,060,695
Ensembl chrNW_004936521:8,057,874...8,060,695
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:3630244 NCBI chrNW_004936749:900,208...991,891 JBrowse link
G Prl prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chrNW_004936552:7,204,298...7,212,632 JBrowse link
G Prok2 prokineticin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179885|PMID:12024206) MGI
Ensembl
PMID:12024206 GO_REF:0000107 MGI:2179885 NCBI chrNW_004936603:3,299,736...3,419,539
Ensembl chrNW_004936603:3,299,736...3,310,011
JBrowse link
G Prokr2 prokineticin receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179885|PMID:12024206) MGI
Ensembl
PMID:12024206 GO_REF:0000107 MGI:2179885 NCBI chrNW_004936485:13,620,000...13,632,134
Ensembl chrNW_004936485:13,619,835...13,632,881
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,934,951...2,945,753
Ensembl chrNW_004936599:2,935,397...2,945,345
JBrowse link
G Rora RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643
JBrowse link
G Rorb RAR related orphan receptor B ISO RGD PMID:15781226 PMID:18321474 RGD:2301031 RGD:2325957 NCBI chrNW_004936503:10,294,530...10,473,070
Ensembl chrNW_004936503:10,295,167...10,470,813
JBrowse link
G Rorc RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO (MGI:5648148|PMID:25101983) MGI PMID:25101983 MGI:5648148 NCBI chrNW_004936473:28,010,123...28,102,124
Ensembl chrNW_004936473:28,010,123...28,102,124
JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:28,162,528...28,248,474
Ensembl chrNW_004936473:28,162,528...28,248,474
JBrowse link
G Scn9a sodium voltage-gated channel alpha subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:13,063,971...13,153,030
Ensembl chrNW_004936469:13,064,043...13,152,974
JBrowse link
G Setx senataxin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5430667|PMID:22767893) MGI
Ensembl
PMID:22767893 GO_REF:0000107 MGI:5430667 NCBI chrNW_004936487:18,858,384...18,945,253
Ensembl chrNW_004936487:18,855,744...18,944,158
JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004936712:1,614,979...1,621,207
Ensembl chrNW_004936712:1,614,979...1,622,466
JBrowse link
G Sftpc surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004936555:5,966,610...5,982,083
Ensembl chrNW_004936555:5,979,417...5,982,011
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:21903759 RGD:10450532 NCBI chrNW_004936541:718,577...727,420
Ensembl chrNW_004936541:718,577...729,876
JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chrNW_004936538:6,205,268...6,239,062
Ensembl chrNW_004936538:6,205,251...6,239,083
JBrowse link
G Slc9a3 solute carrier family 9 member A3 ISO RGD PMID:15780093 RGD:1581376 NCBI chrNW_004936815:963,715...999,280
Ensembl chrNW_004936815:963,715...999,280
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:1,408,669...1,419,717
Ensembl chrNW_004936741:1,406,521...1,419,776
JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chrNW_004936710:1,523,289...1,530,181
Ensembl chrNW_004936710:1,523,355...1,529,672
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004936721:646,778...661,144
Ensembl chrNW_004936721:646,772...661,091
JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004936613:1,443,663...1,467,776
Ensembl chrNW_004936613:1,443,629...1,467,229
JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004936510:5,643,072...5,672,258
Ensembl chrNW_004936510:5,643,044...5,672,255
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:18,691,872...18,749,217
Ensembl chrNW_004936474:18,691,835...18,749,235
JBrowse link
G Timeless timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:780,021...792,856
Ensembl chrNW_004936646:780,087...792,837
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766
JBrowse link
G Top1 DNA topoisomerase I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:641,451...723,323
Ensembl chrNW_004936561:641,423...723,518
JBrowse link
G Tp53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Tph1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chrNW_004936528:1,090,529...1,116,081
Ensembl chrNW_004936528:1,096,352...1,115,688
JBrowse link
G Tph2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chrNW_004936568:974,575...1,065,800
Ensembl chrNW_004936568:974,767...1,065,804
JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chrNW_004936550:33,797...42,233
Ensembl chrNW_004936550:34,048...41,840
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5436392|PMID:22678064) MGI
TreeGrafter
Ensembl
PMID:22678064 GO_REF:0000107 GO_REF:0000118 MGI:5436392 NCBI chrNW_004936476:20,953,377...21,351,925
Ensembl chrNW_004936476:20,953,347...21,351,255
JBrowse link
G Gpr157 G protein-coupled receptor 157 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,264,409...3,281,857
Ensembl chrNW_004936623:3,264,403...3,281,931
JBrowse link
G Gpr176 G protein-coupled receptor 176 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,298,247...3,413,093
Ensembl chrNW_004936471:3,298,139...3,413,095
JBrowse link
G Nr1d2 nuclear receptor subfamily 1 group D member 2 involved_in ISO (MGI:6157418|PMID:29723273) UniProt PMID:29723273 MGI:6157418 NCBI chrNW_004936473:15,624,597...15,646,875 JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO (MGI:7572085|PMID:38172607) MGI PMID:38172607 MGI:7572085 NCBI chrNW_004936530:4,756,069...4,761,484
Ensembl chrNW_004936530:4,753,751...4,761,695
JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO (MGI:4949943|PMID:21525287) MGI PMID:21525287 MGI:4949943 NCBI chrNW_004936508:7,103,578...7,106,588
Ensembl chrNW_004936508:7,104,066...7,107,597
JBrowse link
G Tp53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,284,243...4,310,545
Ensembl chrNW_004936542:4,285,819...4,307,925
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004936521:4,560,078...5,023,780
Ensembl chrNW_004936521:4,557,971...5,023,800
JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (MGI:4820700|PMID:20106950) UniProt PMID:20106950 MGI:4820700 NCBI chrNW_004936546:3,737,908...3,783,492
Ensembl chrNW_004936546:3,737,851...3,783,588
JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936577:4,316,099...4,321,193
Ensembl chrNW_004936577:4,315,977...4,322,032
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 involved_in ISO (MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:3798698 NCBI chrNW_004936548:1,306,939...1,314,678 JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:5,167,611...5,239,128
Ensembl chrNW_004936528:5,164,481...5,239,128
JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936548:181,793...241,050
Ensembl chrNW_004936548:182,075...225,856
JBrowse link
G Cartpt CART prepropeptide involved_in ISO PMID:15680948 HGNC-UCL PMID:15680948 RGD:8553315 NCBI chrNW_004936549:4,717,337...4,719,523
Ensembl chrNW_004936549:4,717,771...4,719,395
JBrowse link
G Cavin3 caveolae associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:387,320...388,877
Ensembl chrNW_004936842:387,551...388,882
JBrowse link
G Ciart circadian associated repressor of transcription involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936580:566,745...571,160 JBrowse link
G Clock clock circadian regulator involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303
JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chrNW_004936574:3,478,969...3,546,738
Ensembl chrNW_004936574:3,479,060...3,548,951
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480
JBrowse link
G Csnk1d casein kinase 1 delta involved_in ISO (MGI:3849793|PMID:19414593), (MGI:5294280|PMID:21930935) UniProt PMID:19414593 PMID:21930935 MGI:3849793 MGI:5294280 NCBI chrNW_004936594:5,720,887...5,743,206
Ensembl chrNW_004936594:5,724,406...5,743,180
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3625767|PMID:16606840) MGI
Ensembl
PMID:16606840 GO_REF:0000107 MGI:3625767 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798
JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within ISO (MGI:3611612|PMID:15878801) MGI PMID:15878801 MGI:3611612 NCBI chrNW_004936536:1,580,732...1,616,726
Ensembl chrNW_004936536:1,580,732...1,616,725
JBrowse link
G Egr1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749
JBrowse link
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:13,603,256...13,665,298
Ensembl chrNW_004936491:13,603,256...13,665,275
JBrowse link
G Hdac1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (MGI:5567917|PMID:15226430) UniProt PMID:15226430 MGI:5567917 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641
JBrowse link
G Hdac3 histone deacetylase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821398|PMID:19037247) MGI
Ensembl
PMID:19037247 GO_REF:0000107 MGI:3821398 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556
JBrowse link
G Hnf1b HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936751:478,978...622,818
Ensembl chrNW_004936751:478,300...622,820
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:18,610,721...18,611,889
Ensembl chrNW_004936485:18,610,665...18,612,059
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:8,758,098...8,759,684
Ensembl chrNW_004936474:8,758,030...8,759,823
JBrowse link
G ID4 inhibitor of DNA binding 4 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chrNW_004937231:62,629...63,442 JBrowse link
G Kdm2a lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,466,427...2,576,623
Ensembl chrNW_004936599:2,466,214...2,576,623
JBrowse link
G Kdm5a lysine demethylase 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:486,424...570,546
Ensembl chrNW_004936606:485,655...570,739
JBrowse link
G Kdm8 lysine demethylase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:10,932,541...10,955,772
Ensembl chrNW_004936501:10,933,671...10,951,707
JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:3,480,071...3,566,823
Ensembl chrNW_004936542:3,391,774...3,562,147
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:5,752,319...5,846,074
Ensembl chrNW_004936540:5,752,197...5,845,159
JBrowse link
G LOC101967743 casein kinase I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,904,622...2,925,904
Ensembl chrNW_004936492:2,907,015...2,928,418
JBrowse link
G LOC101969407 nicotinamide phosphoribosyltransferase-like involved_in IEA UniProt
Ensembl
GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936578:5,730,169...5,731,985 JBrowse link
G LOC101976473 RNA-binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,960,066...2,968,092
Ensembl chrNW_004936599:2,960,063...2,968,210
JBrowse link
G Maged1 MAGE family member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936909:493,998...592,649
Ensembl chrNW_004936909:585,206...592,644
JBrowse link
G Mc3r melanocortin 3 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936875:172,764...174,446
Ensembl chrNW_004936875:172,862...173,830
JBrowse link
G Mta1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:117,785...140,917
Ensembl chrNW_004936621:117,785...140,926
JBrowse link
G Mybbp1a MYB binding protein 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:1,095,022...1,108,545
Ensembl chrNW_004936677:1,095,420...1,108,496
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:3,977,950...4,248,959
Ensembl chrNW_004936511:3,978,246...4,249,234
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936479:17,682,070...17,716,713
Ensembl chrNW_004936479:17,682,201...17,716,661
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454
JBrowse link
G Ncor1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (MGI:3821398|PMID:19037247) MGI PMID:19037247 MGI:3821398 NCBI chrNW_004936821:382,756...538,254
Ensembl chrNW_004936821:382,383...536,223
JBrowse link
G Ngfr nerve growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,038,500...12,057,257
Ensembl chrNW_004936490:12,035,769...12,057,263
JBrowse link
G Noct nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:8,504,518...8,509,376
Ensembl chrNW_004936535:8,505,834...8,507,928
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097
JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:11,316,857...11,319,669
Ensembl chrNW_004936474:11,316,700...11,319,669
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936505:7,886,327...7,966,969
Ensembl chrNW_004936505:7,884,724...7,966,928
JBrowse link
G Nudt12 nudix hydrolase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936523:964,858...979,118
Ensembl chrNW_004936523:964,813...979,250
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:99,335...137,833
Ensembl chrNW_004936762:99,293...137,874
JBrowse link
G Per1 period circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170
JBrowse link
G Per2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295
JBrowse link
G Per3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936623:2,291,211...2,362,693
Ensembl chrNW_004936623:2,290,614...2,336,634
JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:3,672,445...3,725,645
Ensembl chrNW_004936629:3,672,460...3,725,626
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,345,982...2,348,494
Ensembl chrNW_004936599:2,344,552...2,348,494
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:3,981,364...4,002,083
Ensembl chrNW_004936493:3,981,370...4,002,667
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,631,794...3,651,754
Ensembl chrNW_004936558:3,630,561...3,651,786
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:3630244 NCBI chrNW_004936749:900,208...991,891 JBrowse link
G Prmt5 protein arginine methyltransferase 5 involved_in ISO (MGI:5464222|PMID:23133559) UniProt PMID:23133559 MGI:5464222 NCBI chrNW_004936722:1,379,515...1,388,538
Ensembl chrNW_004936722:1,379,515...1,388,546
JBrowse link
G Rai1 retinoic acid induced 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936741:1,332,353...1,408,116
Ensembl chrNW_004936741:1,332,339...1,406,628
JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,934,951...2,945,753
Ensembl chrNW_004936599:2,935,397...2,945,345
JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,569,603...1,596,831
Ensembl chrNW_004936706:1,569,756...1,596,456
JBrowse link
G Rora RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643
JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030), (MGI:5582866|PMID:23723244) UniProt PMID:22753030 PMID:23723244 MGI:5504349 MGI:5582866 NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096
JBrowse link
G Top1 DNA topoisomerase I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:641,451...723,323
Ensembl chrNW_004936561:641,423...723,518
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,284,243...4,310,545
Ensembl chrNW_004936542:4,285,819...4,307,925
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chrNW_004936475:21,005,242...21,235,992
Ensembl chrNW_004936475:21,080,302...21,231,544
JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6364050|PMID:31560728) MGI
Ensembl
PMID:31560728 GO_REF:0000107 MGI:6364050 NCBI chrNW_004936490:15,029,447...15,038,046
Ensembl chrNW_004936490:15,029,562...15,037,756
JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:2,096,370...2,115,135
Ensembl chrNW_004936738:2,096,370...2,113,604
JBrowse link
G LOC101976473 RNA-binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,960,066...2,968,092
Ensembl chrNW_004936599:2,960,063...2,968,210
JBrowse link
G Per1 period circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012) UniProt PMID:11395012 MGI:1935010 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chrNW_004936561:6,314,797...6,333,961
Ensembl chrNW_004936561:6,314,705...6,334,439
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6316762|PMID:30498428) MGI
Ensembl
PMID:30498428 GO_REF:0000107 MGI:6316762 NCBI chrNW_004936471:8,209,091...8,226,249
Ensembl chrNW_004936471:8,209,057...8,226,353
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (MGI:6503588|PMID:32889171) MGI PMID:32889171 MGI:6503588 NCBI chrNW_004936527:2,859,442...4,748,885
Ensembl chrNW_004936527:2,859,930...4,746,995
JBrowse link
G Nlgn3 neuroligin 3 ISO RGD PMID:28958035 RGD:126790492 NCBI chrNW_004936762:435,729...458,261
Ensembl chrNW_004936762:435,729...458,423
JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:2667759 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097
JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061
JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:5,838,663...5,933,174
Ensembl chrNW_004936476:5,838,830...5,933,207
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5436392|PMID:22678064) Ensembl
MGI
PMID:22678064 GO_REF:0000107 MGI:5436392 NCBI chrNW_004936476:20,953,377...21,351,925
Ensembl chrNW_004936476:20,953,347...21,351,255
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (MGI:2445919|PMID:12419540) MGI PMID:12419540 MGI:2445919 NCBI chrNW_004936471:39,791,633...40,193,049
Ensembl chrNW_004936471:39,791,613...40,187,923
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,944,841...2,986,113
Ensembl chrNW_004936497:2,945,010...2,995,207
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2445865|PMID:12451142) MGI
Ensembl
PMID:12451142 GO_REF:0000107 MGI:2445865 NCBI chrNW_004936521:10,038,345...10,039,345
Ensembl chrNW_004936521:10,038,765...10,039,223
JBrowse link
G Chrm1 cholinergic receptor muscarinic 1 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936581:387,939...400,740
Ensembl chrNW_004936581:387,705...400,740
JBrowse link
G Clock clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303
JBrowse link
G Gna11 G protein subunit alpha 11 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936588:1,770,777...1,789,143
Ensembl chrNW_004936588:1,770,771...1,789,170
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3838062|PMID:19217292) MGI PMID:19217292 MGI:3838062 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4420841|PMID:20080691) MGI
Ensembl
PMID:20080691 GO_REF:0000107 MGI:4420841 NCBI chrNW_004936497:2,467,776...2,683,794
Ensembl chrNW_004936497:2,467,684...2,683,799
JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5440343|PMID:22920256) MGI
Ensembl
PMID:22920256 GO_REF:0000107 MGI:5440343 NCBI chrNW_004936540:160,638...162,662
Ensembl chrNW_004936540:161,124...161,846
JBrowse link
G Timeless timeless circadian regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:780,021...792,856
Ensembl chrNW_004936646:780,087...792,837
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,038,345...10,039,345
Ensembl chrNW_004936521:10,038,765...10,039,223
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,316,099...4,321,193
Ensembl chrNW_004936577:4,315,977...4,322,032
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,551,621...2,625,327
Ensembl chrNW_004936596:2,551,506...2,625,327
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480
JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,259,066...4,280,501
Ensembl chrNW_004936511:4,258,548...4,283,285
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881
JBrowse link
G LOC101973554 F-box/LRR-repeat protein 21 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856) UniProt PMID:23452855 PMID:23452856 MGI:5470183 MGI:5487698 NCBI chrNW_004936597:3,037,282...3,045,145 JBrowse link
G LOC101976473 RNA-binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,960,066...2,968,092
Ensembl chrNW_004936599:2,960,063...2,968,210
JBrowse link
G Mta1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:117,785...140,917
Ensembl chrNW_004936621:117,785...140,926
JBrowse link
G Nr2f6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530176|PMID:15741322) MGI
Ensembl
PMID:15741322 GO_REF:0000107 MGI:3530176 NCBI chrNW_004936596:3,596,720...3,606,283
Ensembl chrNW_004936596:3,597,651...3,605,836
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chrNW_004936804:261,210...272,449
Ensembl chrNW_004936804:263,720...272,132
JBrowse link
G Opn5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:12,740,038...12,766,310
Ensembl chrNW_004936476:12,722,563...12,766,512
JBrowse link
G Pde6b phosphodiesterase 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,418,037...22,472,251
Ensembl chrNW_004936477:22,417,453...22,472,185
JBrowse link
G Per1 period circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170
JBrowse link
G Per2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295
JBrowse link
G Per3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936623:2,291,211...2,362,693
Ensembl chrNW_004936623:2,290,614...2,336,634
JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,345,982...2,348,494
Ensembl chrNW_004936599:2,344,552...2,348,494
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chrNW_004936493:3,981,364...4,002,083
Ensembl chrNW_004936493:3,981,370...4,002,667
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,631,794...3,651,754
Ensembl chrNW_004936558:3,630,561...3,651,786
JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,934,951...2,945,753
Ensembl chrNW_004936599:2,935,397...2,945,345
JBrowse link
G Sik1 salt inducible kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:774,749...784,326
Ensembl chrNW_004936500:774,092...784,330
JBrowse link
G Tp53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,284,243...4,310,545
Ensembl chrNW_004936542:4,285,819...4,307,925
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfn1 ankyrin repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5642309|PMID:26131556) MGI
Ensembl
PMID:26131556 GO_REF:0000107 MGI:5642309 NCBI chrNW_004936490:6,341,849...6,494,377
Ensembl chrNW_004936490:6,371,204...6,632,690
JBrowse link
G Ciart circadian associated repressor of transcription involved_in ISO (MGI:5568140|PMID:24736997) UniProt PMID:24736997 MGI:5568140 NCBI chrNW_004936580:566,745...571,160 JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (MGI:6503588|PMID:32889171) MGI PMID:32889171 MGI:6503588 NCBI chrNW_004936527:2,859,442...4,748,885
Ensembl chrNW_004936527:2,859,930...4,746,995
JBrowse link
G Egr1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936605:4,370,222...4,828,972
Ensembl chrNW_004936605:4,372,671...4,825,423
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:3654773 NCBI chrNW_004936521:2,000,113...2,706,010
Ensembl chrNW_004936521:2,000,109...2,705,365
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004936896:228,908...539,836
Ensembl chrNW_004936896:230,494...540,071
JBrowse link
G Mc3r melanocortin 3 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936875:172,764...174,446
Ensembl chrNW_004936875:172,862...173,830
JBrowse link
G Mta1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:117,785...140,917
Ensembl chrNW_004936621:117,785...140,926
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3769195|PMID:17712420) MGI
Ensembl
PMID:17712420 GO_REF:0000107 MGI:3769195 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454
JBrowse link
G Ncor1 nuclear receptor corepressor 1 involved_in ISO (MGI:3821398|PMID:19037247) UniProt PMID:19037247 MGI:3821398 NCBI chrNW_004936821:382,756...538,254
Ensembl chrNW_004936821:382,383...536,223
JBrowse link
G Nms neuromedin S acts_upstream_of_or_within ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 Ensembl chrNW_004936661:479,838...493,365 JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:2667759 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) CACAO PMID:17706614 MGI:3759727 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,284,243...4,310,545
Ensembl chrNW_004936542:4,285,819...4,307,925
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK interacting pacemaker involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936488:5,938,328...5,954,246
Ensembl chrNW_004936488:5,938,170...5,953,812
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480
JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in ISO (PMID:25936801) UniProt PMID:25936801
G Per2 period circadian regulator 2 involved_in ISO (MGI:4410413|PMID:19605937) UniProt PMID:19605937 MGI:4410413 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295
JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,078,681...6,133,184
Ensembl chrNW_004936555:6,078,681...6,133,020
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chrNW_004936474:17,776,490...17,791,966 JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:34,206,084...34,260,538
Ensembl chrNW_004936471:34,204,524...34,260,564
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chrNW_004936567:1,430,128...1,508,626
Ensembl chrNW_004936567:1,429,817...1,462,532
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:3,037,862...3,044,863
Ensembl chrNW_004936602:3,038,549...3,042,506
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004936567:1,430,128...1,508,626
Ensembl chrNW_004936567:1,429,817...1,462,532
JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613
JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004936591:1,174,364...1,250,233
Ensembl chrNW_004936591:1,174,069...1,249,410
JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chrNW_004936591:5,771,371...5,846,177
Ensembl chrNW_004936591:5,774,326...5,836,444
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:5,167,611...5,239,128
Ensembl chrNW_004936528:5,164,481...5,239,128
JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936548:181,793...241,050
Ensembl chrNW_004936548:182,075...225,856
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:4,215,219...4,424,498
Ensembl chrNW_004936600:4,213,956...4,397,987
JBrowse link
G Clock clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936609:3,256,658...3,341,918
Ensembl chrNW_004936609:3,256,657...3,341,994
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chrNW_004936674:1,703,814...1,713,860
Ensembl chrNW_004936674:1,703,814...1,713,860
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:10,517,488...10,520,567
Ensembl chrNW_004936494:10,517,488...10,520,566
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chrNW_004936787:330,390...1,491,994
Ensembl chrNW_004936787:332,342...1,491,285
JBrowse link
G Rora RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643
JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chrNW_004936580:1,997,640...2,020,649
Ensembl chrNW_004936580:1,997,640...2,020,649
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:18,691,872...18,749,217
Ensembl chrNW_004936474:18,691,835...18,749,235
JBrowse link
G Timeless timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chrNW_004936646:780,021...792,856
Ensembl chrNW_004936646:780,087...792,837
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chrNW_004936561:3,946,256...3,954,472
Ensembl chrNW_004936561:3,950,340...3,952,405
JBrowse link
G Ghrhr growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chrNW_004936478:7,188,826...7,202,854
Ensembl chrNW_004936478:7,188,826...7,201,932
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:3,037,862...3,044,863
Ensembl chrNW_004936602:3,038,549...3,042,506
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chrNW_004936674:1,703,814...1,713,860
Ensembl chrNW_004936674:1,703,814...1,713,860
JBrowse link
G Npy2r neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chrNW_004936576:1,932,526...1,939,560
Ensembl chrNW_004936576:1,932,870...1,938,703
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004936591:1,174,364...1,250,233
Ensembl chrNW_004936591:1,174,069...1,249,410
JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004936518:1,903,636...1,916,746
Ensembl chrNW_004936518:1,903,725...1,916,746
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chrNW_004936561:3,946,256...3,954,472
Ensembl chrNW_004936561:3,950,340...3,952,405
JBrowse link
G Pmch pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chrNW_004936492:11,947,489...11,948,896
Ensembl chrNW_004936492:11,947,489...11,948,896
JBrowse link
G Uts2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004936623:2,339,259...2,345,717
Ensembl chrNW_004936623:2,340,778...2,345,700
JBrowse link
G Uts2r urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004936923:24,952...31,083 JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004936619:597,970...618,564
Ensembl chrNW_004936619:608,441...616,779
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chrNW_004936804:261,210...272,449
Ensembl chrNW_004936804:263,720...272,132
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936703:951,935...1,415,991
Ensembl chrNW_004936703:758,647...1,414,185
JBrowse link
G Nps neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chrNW_004936486:15,172,068...15,175,568
Ensembl chrNW_004936486:15,172,256...15,175,339
JBrowse link
G Uts2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004936623:2,339,259...2,345,717
Ensembl chrNW_004936623:2,340,778...2,345,700
JBrowse link
G Uts2r urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004936923:24,952...31,083 JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:20,310,509...20,477,506
Ensembl chrNW_004936478:20,310,503...20,456,141
JBrowse link
G Atg7 autophagy related 7 involved_in ISO (MGI:6208175|PMID:29937374) UniProt PMID:29937374 MGI:6208175 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,316,099...4,321,193
Ensembl chrNW_004936577:4,315,977...4,322,032
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:4,215,219...4,424,498
Ensembl chrNW_004936600:4,213,956...4,397,987
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,341,455...6,356,677
Ensembl chrNW_004936555:6,341,390...6,356,668
JBrowse link
G Cdk1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:2,300,682...2,313,611
Ensembl chrNW_004936614:2,300,513...2,313,624
JBrowse link
G Clock clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480
JBrowse link
G Csnk1d casein kinase 1 delta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:5,720,887...5,743,206
Ensembl chrNW_004936594:5,724,406...5,743,180
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,710,382...1,742,598
Ensembl chrNW_004936581:1,710,382...1,742,598
JBrowse link
G Drd4 dopamine receptor D4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:468,334...471,254
Ensembl chrNW_004936888:468,403...471,205
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939
JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,259,066...4,280,501
Ensembl chrNW_004936511:4,258,548...4,283,285
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (MGI:6294161|PMID:28556462) UniProt PMID:28556462 MGI:6294161 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303
JBrowse link
G Hdac3 histone deacetylase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:2,401,053...2,425,989
Ensembl chrNW_004936530:2,401,043...2,454,466
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:2,096,370...2,115,135
Ensembl chrNW_004936738:2,096,370...2,113,604
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881
JBrowse link
G Kdm2a lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,466,427...2,576,623
Ensembl chrNW_004936599:2,466,214...2,576,623
JBrowse link
G Klf10 KLF transcription factor 10 involved_in ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chrNW_004936470:40,980,487...40,986,880
Ensembl chrNW_004936470:40,980,487...40,986,885
JBrowse link
G LOC101967743 casein kinase I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,904,622...2,925,904
Ensembl chrNW_004936492:2,907,015...2,928,418
JBrowse link
G Maged1 MAGE family member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936909:493,998...592,649
Ensembl chrNW_004936909:585,206...592,644
JBrowse link
G Magel2 MAGE family member L2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936805:882,296...886,442
Ensembl chrNW_004936805:882,273...886,475
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004936896:228,908...539,836
Ensembl chrNW_004936896:230,494...540,071
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:551,678...602,027
Ensembl chrNW_004936739:551,629...602,047
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
JBrowse link
G Noct nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:8,504,518...8,509,376
Ensembl chrNW_004936535:8,505,834...8,507,928
JBrowse link
G Nono non-POU domain containing octamer binding involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:322,413...343,126
Ensembl chrNW_004936762:321,280...341,537
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867
JBrowse link
G Nr1d2 nuclear receptor subfamily 1 group D member 2 involved_in ISO (MGI:5526909|PMID:23221024)
(MGI:6162161|PMID:29533925)
UniProt PMID:23221024 PMID:29533925 MGI:5526909 MGI:6162161 NCBI chrNW_004936473:15,624,597...15,646,875 JBrowse link
G Opn4 opsin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:261,210...272,449
Ensembl chrNW_004936804:263,720...272,132
JBrowse link
G Per1 period circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012), (MGI:4410390|PMID:19917250) UniProt PMID:11395012 PMID:19917250 MGI:1935010 MGI:4410390 NCBI chrNW_004936525:221,601...263,284
Ensembl chrNW_004936525:221,510...263,295
JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:3,672,445...3,725,645
Ensembl chrNW_004936629:3,672,460...3,725,626
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (MGI:3830801|PMID:19041764) UniProt PMID:19041764 MGI:3830801 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,345,982...2,348,494
Ensembl chrNW_004936599:2,344,552...2,348,494
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:3,981,364...4,002,083
Ensembl chrNW_004936493:3,981,370...4,002,667
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,631,794...3,651,754
Ensembl chrNW_004936558:3,630,561...3,651,786
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879
JBrowse link
G Prkcg protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936994:87,525...105,125
Ensembl chrNW_004936994:87,519...105,134
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
G Pspc1 paraspeckle component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936720:1,876,726...1,941,705
Ensembl chrNW_004936720:1,876,475...1,967,662
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:5567901|PMID:23172836)
(PMID:23172836)
UniProt PMID:23172836 MGI:5567901 NCBI chrNW_004936532:7,142,580...7,284,722
Ensembl chrNW_004936532:7,145,882...7,286,244
JBrowse link
G Rora RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643
JBrowse link
G Rorb RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:10,294,530...10,473,070
Ensembl chrNW_004936503:10,295,167...10,470,813
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chrNW_004936474:17,776,490...17,791,966 JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936758:1,115,980...1,132,225
Ensembl chrNW_004936758:1,116,056...1,213,442
JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096
JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:2,953,837...3,021,430
Ensembl chrNW_004936540:2,953,831...3,021,485
JBrowse link
G Srrd SRR1 domain containing involved_in ISO (MGI:6282940|PMID:28802827) UniProt PMID:28802827 MGI:6282940 NCBI chrNW_004936657:1,104,833...1,112,854
Ensembl chrNW_004936657:1,104,833...1,112,374
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (MGI:6253084|PMID:27123980) UniProt PMID:27123980 MGI:6253084 NCBI chrNW_004936474:90,813...103,713 JBrowse link
G Timeless timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:780,021...792,856
Ensembl chrNW_004936646:780,087...792,837
JBrowse link
G Top2a DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,441,463...15,465,692
Ensembl chrNW_004936490:15,441,575...15,466,978
JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:41,187,665...41,290,345
Ensembl chrNW_004936471:41,187,612...41,283,517
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:7,693,681...7,724,215
Ensembl chrNW_004936530:7,694,379...7,724,684
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:7,649,808...7,732,731
Ensembl chrNW_004936502:7,649,842...7,735,382
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chrNW_004936580:4,165,255...4,179,285
Ensembl chrNW_004936580:4,166,619...4,186,443
JBrowse link
G Il6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:2,007,577...2,019,520
Ensembl chrNW_004936704:2,007,577...2,017,764
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (MGI:6874638|PMID:34798058) UniProt PMID:34798058 MGI:6874638 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chrNW_004936580:4,165,255...4,179,285
Ensembl chrNW_004936580:4,166,619...4,186,443
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adrb1 adrenoceptor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:4,400,467...4,401,588
Ensembl chrNW_004936486:4,399,915...4,403,149
JBrowse link
G Cort cortistatin ISO RGD PMID:8622767 RGD:727760 NCBI chrNW_004936623:4,287,175...4,289,347 JBrowse link
G Csf2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chrNW_004936647:3,081,896...3,083,864
Ensembl chrNW_004936647:3,081,896...3,083,864
JBrowse link
G Drd3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chrNW_004936536:1,580,732...1,616,726
Ensembl chrNW_004936536:1,580,732...1,616,725
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936566:2,354,301...2,425,140
Ensembl chrNW_004936566:2,354,441...2,425,176
JBrowse link
G Nmu neuromedin U involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 Ensembl chrNW_004936482:17,936,467...17,961,711 JBrowse link
G Per3 period circadian regulator 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:2,291,211...2,362,693
Ensembl chrNW_004936623:2,290,614...2,336,634
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chrNW_004936706:2,317,137...2,320,993
Ensembl chrNW_004936706:2,315,132...2,320,796
JBrowse link
G Ptgds prostaglandin D2 synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:961,246...964,584
Ensembl chrNW_004936669:961,034...965,136
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in ISO (PMID:11282968) UniProt PMID:11282968 NCBI chrNW_004936476:5,838,663...5,933,174
Ensembl chrNW_004936476:5,838,830...5,933,207
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004936591:1,174,364...1,250,233
Ensembl chrNW_004936591:1,174,069...1,249,410
JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004936518:1,903,636...1,916,746
Ensembl chrNW_004936518:1,903,725...1,916,746
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
JBrowse link
G Oprl1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chrNW_004936514:11,264,392...11,273,584
Ensembl chrNW_004936514:11,258,335...11,273,592
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chrNW_004936475:21,005,242...21,235,992
Ensembl chrNW_004936475:21,080,302...21,231,544
JBrowse link

Term paths to the root