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ONTOLOGY REPORT - ANNOTATIONS


Term:circadian rhythm
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Accession:GO:0007623 term browser browse the term
Definition:Any biological process in an organism that recurs with a regularity of approximately 24 hours.
Synonyms:exact_synonym: circadian process
 related_synonym: circadian response;   response to circadian rhythm
 alt_id: GO:0050895
 xref: Wikipedia:Circadian_rhythm



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circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 ISO RGD PMID:20668054 RGD:4890035 NCBI chr 9:93,049,955...93,146,469 JBrowse link
G ACTB actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chr 3:4,084,275...4,090,383
Ensembl chr 3:4,082,216...4,090,356
JBrowse link
G ADCY1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chr18:50,043,572...50,143,549
Ensembl chr18:50,051,364...50,143,628
JBrowse link
G ADCY6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chr 5:14,834,420...14,855,309
Ensembl chr 5:14,834,426...14,850,728
JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chr13:124,633,906...124,646,237
Ensembl chr13:124,633,685...124,646,646
JBrowse link
G AGRN agrin acts_upstream_of_or_within ISO (PMID:22520507) MGI PMID:22520507 NCBI chr 6:63,366,017...63,398,311
Ensembl chr 6:63,365,983...63,398,309
JBrowse link
G AGRP agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chr 6:28,132,614...28,135,594
Ensembl chr 6:28,132,615...28,134,900
JBrowse link
G ARNTL aryl hydrocarbon receptor nuclear translocator like acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(PMID:12024206), (PMID:12150932), (PMID:12843397), (PMID:12897057)
(PMID:17264215)
(PMID:11163178), (PMID:26945058)
RGD
MGI
GO_Central
TreeGrafter
PMID:9735336 PMID:9878515 PMID:11163178 PMID:12024206 PMID:12150932 More... GO_REF:0000033 GO_REF:0000118 RGD:10043346 RGD:67927 NCBI chr 2:45,895,637...46,025,174
Ensembl chr 2:45,895,289...45,988,570
JBrowse link
G ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10864977) MGI
Ensembl
PMID:10864977 GO_REF:0000107 NCBI chr 5:46,289,873...46,482,369
Ensembl chr 5:46,290,001...46,482,461
JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:34919270 RGD:401938593 NCBI chr12:52,161,776...52,170,362
Ensembl chr12:52,161,778...52,170,342
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,364
JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,742,967...8,745,368
JBrowse link
G ATF5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,945,067...54,950,142
Ensembl chr 6:54,945,119...54,950,137
JBrowse link
G ATOH7 atonal bHLH transcription factor 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12451142) Ensembl
MGI
PMID:12451142 GO_REF:0000107 NCBI chr14:71,398,939...71,402,479
Ensembl chr14:71,400,980...71,401,447
JBrowse link
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:22520507) MGI PMID:22520507 NCBI chr 6:49,905,851...49,927,437
Ensembl chr 6:49,905,847...49,927,633
JBrowse link
G ATP7B ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chr11:15,892,549...15,942,070
Ensembl chr11:15,876,612...15,942,064
JBrowse link
G BDNF brain derived neurotrophic factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,624,048...32,679,765
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:61,526,121...61,533,686
Ensembl chr13:61,526,116...61,533,674
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:47,687,662...47,692,761
Ensembl chr 5:47,686,404...47,692,762
JBrowse link
G CDK4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chr 5:23,039,206...23,041,959
Ensembl chr 5:23,038,891...23,042,061
JBrowse link
G CLDN4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 NCBI chr 3:11,039,711...11,053,930
Ensembl chr 3:11,039,706...11,053,925
JBrowse link
G CLOCK clock circadian regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12024206), (PMID:8171325)
(PMID:12897057)
RGD
MGI
Ensembl
PMID:8171325 PMID:10471199 PMID:12024206 PMID:12897057 GO_REF:0000107 RGD:10401879 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,793,342...54,877,777
JBrowse link
G CREB1 cAMP responsive element binding protein 1 involved_in ISO
IEA
RGD
Ensembl
PMID:21367864 GO_REF:0000107 RGD:7247438 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,705,496...110,771,728
JBrowse link
G CREM cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chr10:57,829,523...57,895,610
Ensembl chr10:57,829,518...57,895,610
JBrowse link
G CRX cone-rod homeobox ISO RGD PMID:9465110 RGD:1600977 NCBI chr 6:53,506,410...53,509,858
Ensembl chr 6:53,506,410...53,512,190
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12024206)
(PMID:12843397)
(PMID:17264215)
Ensembl
MGI
PMID:12024206 PMID:12843397 PMID:17264215 GO_REF:0000107 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,545...13,364,593
JBrowse link
G CRY2 cryptochrome circadian regulator 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17264215)
(PMID:12024206)
RGD
MGI
Ensembl
PMID:11804325 PMID:12024206 PMID:17264215 GO_REF:0000107 RGD:632584 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,587,109...16,620,385
JBrowse link
G CYP7B1 cytochrome P450 family 7 subfamily B member 1 ISO RGD PMID:12759897 RGD:1298869 NCBI chr 4:69,615,953...69,793,131
Ensembl chr 4:69,616,049...69,806,496
JBrowse link
G DDC dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,496,365...136,571,212
JBrowse link
G DDX5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chr12:14,571,712...14,580,740
Ensembl chr12:14,571,951...14,580,742
JBrowse link
G DHX9 DExH-box helicase 9 acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,141,967...124,185,349
JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO RGD PMID:3202908 PMID:8504424 PMID:19628084 RGD:11251745 RGD:1599793 RGD:5133425 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,414...120,712,459
JBrowse link
G DRD4 dopamine receptor D4 ISO RGD PMID:18778704 PMID:19482058 RGD:401960072 RGD:7175073 NCBI chr 2:398,766...401,539
Ensembl chr 2:398,766...402,433
JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:201,008,506...201,159,946
Ensembl chr13:201,009,480...201,159,948
JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chr 9:139,302,410...139,474,632
Ensembl chr 9:139,300,022...139,475,589
JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296
JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:7,311,165...7,394,515
Ensembl chr 5:7,311,171...7,393,760
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chr 5:21,474,218...21,495,040
Ensembl chr 5:21,474,475...21,495,038
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chr11:78,512,389...78,518,668
Ensembl chr11:78,512,137...78,518,668
JBrowse link
G FAS Fas cell surface death receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr14:100,927,305...100,954,781
Ensembl chr14:100,927,089...100,956,716
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819 PMID:21367864 RGD:2293795 RGD:7247438 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (MGI:4461092|PMID:20123978) UniProt PMID:20123978 MGI:4461092 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,569
JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,411
JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chr11:7,195,556...7,321,071 JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chr 6:47,643,561...47,655,856
Ensembl chr 6:47,643,566...47,657,833
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 6:81,203,067...81,239,823
Ensembl chr 6:81,196,062...81,239,406
JBrowse link
G HOMER1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chr 2:88,116,664...88,253,843
Ensembl chr 2:88,122,882...88,255,281
JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chr 3:23,255,936...23,366,570
Ensembl chr 3:23,255,961...23,366,351
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:102,443,312...102,548,894
Ensembl chr14:102,444,588...102,548,907
JBrowse link
G ID1 inhibitor of DNA binding 1 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr17:35,316,518...35,317,742
Ensembl chr17:35,316,514...35,317,736
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747) UniProt PMID:19217292 PMID:19740747 MGI:3838062 MGI:4420353 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,763...127,503,257
JBrowse link
G ID3 inhibitor of DNA binding 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:81,422,541...81,424,169
Ensembl chr 6:81,422,546...81,424,075
JBrowse link
G ID4 inhibitor of DNA binding 4 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr 7:15,281,535...15,284,895
Ensembl chr 7:15,281,757...15,282,839
JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,658,642...31,663,660
Ensembl chr13:31,658,650...31,663,552
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr 6:153,686,425...153,687,635
Ensembl chr 6:153,685,682...153,687,636
JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr 2:59,530,991...59,532,846 JBrowse link
G KCNH7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chr15:69,053,456...69,555,144
Ensembl chr15:69,059,870...69,555,049
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:16845385) MGI PMID:16845385 NCBI chr14:79,345,382...80,106,337
Ensembl chr14:79,352,005...80,106,295
JBrowse link
G KLF10 KLF transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:34,430,132...34,435,990
Ensembl chr 4:34,429,941...34,436,004
JBrowse link
G KLF9 KLF transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:223,723,613...223,747,661
Ensembl chr 1:223,720,435...223,748,621
JBrowse link
G LEP leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148
JBrowse link
G LIPC lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chr 1:113,433,684...113,604,139
Ensembl chr 1:113,433,687...113,583,963
JBrowse link
G LOC100518330 serotonin N-acetyltransferase involved_in ISO
IBA
IEA
RGD
GO_Central
TreeGrafter
Ensembl
PMID:16166080 PMID:18321474 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2301031 RGD:2312676 NCBI chr12:5,042,897...5,047,626
Ensembl chr12:5,042,897...5,044,505
JBrowse link
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:26945058) MGI PMID:26945058 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127
JBrowse link
G LOC102167936 uncharacterized LOC102167936 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:70,678,048...70,697,941
Ensembl chr 2:70,680,203...70,681,063
JBrowse link
G LOC110255264 serotonin N-acetyltransferase-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:5,036,426...5,039,415 JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chr 3:59,220,203...59,225,097
Ensembl chr 3:59,218,688...59,225,249
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5527005|PMID:24209618) UniProt PMID:24209618 MGI:5527005 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,934
JBrowse link
G MTNR1A melatonin receptor 1A ISO RGD PMID:23895529 RGD:9686056 NCBI chr17:8,597,047...8,618,746
Ensembl chr17:8,596,911...8,617,657
JBrowse link
G MTTP microsomal triglyceride transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:120,820,660...120,871,468
Ensembl chr 8:120,820,656...120,879,388
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase involved_in ISO
IEA
RGD
Ensembl
PMID:26547053 GO_REF:0000107 RGD:13781893 NCBI chr 9:106,119,896...106,162,126
Ensembl chr 9:106,119,899...106,294,586
JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:64,888,029...65,245,757
Ensembl chr 4:64,954,238...65,246,572
JBrowse link
G NDUFA9 NADH:ubiquinone oxidoreductase subunit A9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:65,760,078...65,788,703
Ensembl chr 5:65,759,727...65,788,646
JBrowse link
G NFIL3 nuclear factor, interleukin 3 regulated involved_in IEA
IBA
InterPro
TreeGrafter
GO_Central
UniProt
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr14:2,588,887...2,603,774
Ensembl chr14:2,588,896...2,603,255
JBrowse link
G NGF nerve growth factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr 4:105,256,691...105,307,843
Ensembl chr 4:105,256,749...105,307,837
JBrowse link
G NGFR nerve growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:25,699,410...25,720,355
Ensembl chr12:25,699,427...25,720,356
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575
JBrowse link
G NOCT nocturnin involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,420...87,909,241
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in ISO (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,948...44,218,146
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISO (MGI:5559671|PMID:14645221) UniProt PMID:14645221 MGI:5559671 NCBI chr 3:53,298,805...53,490,375
Ensembl chr 3:53,298,811...53,490,574
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:84,225,670...84,228,156
Ensembl chr 6:84,225,694...84,228,481
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12150932) RGD
MGI
Ensembl
PMID:12150932 PMID:24144766 GO_REF:0000107 RGD:10448984 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chr 2:144,822,937...144,956,451
Ensembl chr 2:144,822,939...144,956,451
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:179,822,731...179,916,226
Ensembl chr13:179,825,281...179,915,177
JBrowse link
G NRXN1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,803,519...90,382,034
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:93,219,509...93,237,944
Ensembl chr 4:93,219,516...93,255,981
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,405...30,429,882
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr 1:191,535,262...191,941,675
Ensembl chr 1:191,535,301...191,925,327
JBrowse link
G PAX4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chr18:20,675,874...20,680,315
Ensembl chr18:20,673,114...20,680,287
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chr 1:127,786,174...127,814,096
Ensembl chr 1:127,785,772...127,814,196
JBrowse link
G PER1 period circadian regulator 1 involved_in ISO
IEA
RGD
Ensembl
PMID:11122332 PMID:12176169 GO_REF:0000107 RGD:1299576 RGD:631234 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,889...53,374,248
JBrowse link
G PER2 period circadian regulator 2 acts_upstream_of_or_within
involved_in
ISO (PMID:12843397)
(MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747), (MGI:5503234|PMID:23785138), (MGI:5559671|PMID:14645221)
PMID:15094047
RGD
MGI
UniProt
PMID:9765215 PMID:9878515 PMID:12843397 PMID:14645221 PMID:15094047 More... MGI:3838062 MGI:4420353 MGI:5503234 MGI:5559671 RGD:10043346 RGD:61691 RGD:8554359 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,422...137,837,070
JBrowse link
G PER3 period circadian regulator 3 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chr 1:158,642,810...158,863,643
Ensembl chr 1:158,642,818...158,862,106
JBrowse link
G PRF1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chr14:73,515,306...73,520,256
Ensembl chr14:73,512,769...73,520,202
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (PMID:12725729) MGI PMID:12725729 NCBI chr 8:136,754,698...136,854,589
Ensembl chr 8:136,755,469...136,852,906
JBrowse link
G PRL prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chr 7:17,451,367...17,463,771
Ensembl chr 7:17,451,367...17,463,710
JBrowse link
G PROK2 prokineticin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12024206) Ensembl
MGI
PMID:12024206 GO_REF:0000107 NCBI chr13:53,169,040...53,184,695
Ensembl chr13:53,169,524...53,185,171
JBrowse link
G PROKR1 prokineticin receptor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:73,689,583...73,711,410
Ensembl chr 3:73,691,150...73,710,824
JBrowse link
G PROKR2 prokineticin receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:12024206) Ensembl
MGI
GO_Central
PMID:12024206 GO_REF:0000033 GO_REF:0000107 NCBI chr17:14,243,738...14,257,346
Ensembl chr17:14,242,515...14,257,307
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982
JBrowse link
G QRICH1 glutamine rich 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,663,812...31,714,523
Ensembl chr13:31,658,642...31,714,455
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:5,745,364...5,758,177 JBrowse link
G RORA RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chr 1:110,719,004...111,482,807
Ensembl chr 1:111,375,457...111,477,703
JBrowse link
G RORB RAR related orphan receptor B ISO RGD PMID:15781226 PMID:18321474 RGD:2301031 RGD:2325957 NCBI chr 1:227,573,972...227,776,806
Ensembl chr 1:227,574,648...227,772,671
JBrowse link
G RORC RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chr 4:97,374,672...97,399,017
Ensembl chr 4:97,375,136...97,400,209
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chr 6:144,206,078...144,229,471
Ensembl chr 6:144,206,078...144,229,467
JBrowse link
G SCN10A sodium voltage-gated channel alpha subunit 10 involved_in ISO (PMID:25101983) MGI PMID:25101983 NCBI chr13:23,481,537...23,570,454
Ensembl chr13:23,481,255...23,570,379
JBrowse link
G SCN11A sodium voltage-gated channel alpha subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:23,602,378...23,692,281
Ensembl chr13:23,602,977...23,692,220
JBrowse link
G SCN9A sodium voltage-gated channel alpha subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:72,745,706...72,912,352
Ensembl chr15:72,748,705...72,912,382
JBrowse link
G SETX senataxin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22767893) Ensembl
MGI
PMID:22767893 GO_REF:0000107 NCBI chr 1:272,093,449...272,170,857
Ensembl chr 1:272,095,358...272,170,747
JBrowse link
G SFTPA1 surfactant protein A1 ISO RGD PMID:12872443 RGD:4143473 NCBI chr14:82,091,178...82,095,393
Ensembl chr14:82,091,178...82,095,393
JBrowse link
G SFTPB surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chr 3:59,101,940...59,113,442
Ensembl chr 3:59,101,981...59,112,396
JBrowse link
G SFTPC surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chr14:6,440,309...6,443,104
Ensembl chr14:6,440,309...6,443,095
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297
JBrowse link
G SLC4A1 solute carrier family 4 member 1 ISO RGD PMID:21903759 RGD:10450532 NCBI chr12:18,957,813...18,975,266
Ensembl chr12:18,957,807...18,974,208
JBrowse link
G SLC6A4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chr12:46,285,995...46,328,377
Ensembl chr12:46,285,997...46,314,378
JBrowse link
G SLC9A3 solute carrier family 9 member A3 ISO RGD PMID:15780093 RGD:1581376 NCBI chr16:79,625,555...79,704,084
Ensembl chr16:79,666,825...79,700,658
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:60,733,967...60,750,951
Ensembl chr12:60,733,907...60,751,267
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,377,521...48,385,462
JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr  X:42,797,309...42,811,457
Ensembl chr  X:42,797,828...42,811,461
JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr10:46,874,606...46,900,058
Ensembl chr10:46,873,126...46,900,040
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,114...54,598,407
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:92,350,021...92,412,335
Ensembl chr 6:92,355,667...92,412,330
JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 5:21,763,014...21,787,521 JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,416
JBrowse link
G TOP1 DNA topoisomerase I involved_in ISO (PMID:22904072) UniProt PMID:22904072 NCBI chr17:43,710,270...43,799,700
Ensembl chr17:43,710,290...43,799,700
JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818
JBrowse link
G TPH1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chr 2:41,075,623...41,109,005
Ensembl chr 2:41,075,628...41,109,437
JBrowse link
G TPH2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chr 5:35,917,159...36,016,981
Ensembl chr 5:35,918,370...36,017,509
JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,642,381...105,660,578
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:22678064) Ensembl
MGI
GO_Central
TreeGrafter
PMID:22678064 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:33,723,077...34,122,673
Ensembl chr 7:33,720,014...34,124,458
JBrowse link
G CSNK1E casein kinase 1 epsilon ISO RGD PMID:17502429 RGD:10395242 NCBI chr 5:9,594,461...9,620,483
Ensembl chr 5:9,594,934...9,620,476
JBrowse link
G GPR157 G protein-coupled receptor 157 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:69,558,940...69,581,656
Ensembl chr 6:69,557,701...69,581,643
JBrowse link
G GPR176 G protein-coupled receptor 176 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,355,332...131,494,967
Ensembl chr 1:131,365,180...131,494,959
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:10,756,954...10,791,219
Ensembl chr13:10,756,926...10,791,210
JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) MGI PMID:38172607 NCBI chr 3:37,592,982...37,600,004
Ensembl chr 3:37,591,815...37,602,112
JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:21525287) MGI PMID:21525287 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436
JBrowse link
G TP53 tumor protein p53 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,482...46,590,392
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chr14:76,836,072...77,320,586
Ensembl chr14:76,836,095...77,322,416
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:4820700|PMID:20106950) UniProt PMID:20106950 MGI:4820700 NCBI chr 9:86,511,866...86,555,950
Ensembl chr 9:86,511,369...86,555,943
JBrowse link
G ARNTL aryl hydrocarbon receptor nuclear translocator like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:45,895,637...46,025,174
Ensembl chr 2:45,895,289...45,988,570
JBrowse link
G ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:46,289,873...46,482,369
Ensembl chr 5:46,290,001...46,482,461
JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,742,967...8,745,368
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr13:61,526,121...61,533,686
Ensembl chr13:61,526,116...61,533,674
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:47,687,662...47,692,761
Ensembl chr 5:47,686,404...47,692,762
JBrowse link
G CARTPT CART prepropeptide involved_in ISS HGNC-UCL GO_REF:0000024 NCBI chr16:48,043,558...48,045,592
Ensembl chr16:48,043,492...48,045,592
JBrowse link
G CAVIN3 caveolae associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:3,378,144...3,379,851
Ensembl chr 9:3,378,207...3,379,847
JBrowse link
G CIART circadian associated repressor of transcription involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:98,800,849...98,809,573
Ensembl chr 4:98,800,931...98,804,739
JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,793,342...54,877,777
JBrowse link
G CREM cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chr10:57,829,523...57,895,610
Ensembl chr10:57,829,518...57,895,610
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,545...13,364,593
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,587,109...16,620,385
JBrowse link
G CSNK1D casein kinase 1 delta involved_in ISO (MGI:3849793|PMID:19414593), (MGI:5294280|PMID:21930935) UniProt PMID:19414593 PMID:21930935 MGI:3849793 MGI:5294280 NCBI chr12:768,856...794,495
Ensembl chr12:768,865...796,595
JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,594,461...9,620,483
Ensembl chr 5:9,594,934...9,620,476
JBrowse link
G DRD2 dopamine receptor D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16606840) Ensembl
MGI
PMID:16606840 GO_REF:0000107 NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
JBrowse link
G DRD3 dopamine receptor D3 acts_upstream_of_or_within ISO (PMID:15878801) MGI PMID:15878801 NCBI chr13:145,769,294...145,817,997
Ensembl chr13:145,771,774...145,819,168
JBrowse link
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:73,028,804...73,085,319
JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,411
JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISO (MGI:5567917|PMID:15226430) UniProt PMID:15226430 MGI:5567917 NCBI chr 1:79,867,713...79,901,597
Ensembl chr 1:79,863,094...79,901,585
JBrowse link
G HDAC3 histone deacetylase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19037247) Ensembl
MGI
PMID:19037247 GO_REF:0000107 NCBI chr 2:143,273,188...143,287,421
Ensembl chr 2:143,273,192...143,287,399
JBrowse link
G HNF1B HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chr12:39,143,119...39,201,631
Ensembl chr12:39,143,121...39,201,631
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030
JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,281,958...46,444,315
Ensembl chr  X:46,281,967...46,444,228
JBrowse link
G ID1 inhibitor of DNA binding 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr17:35,316,518...35,317,742
Ensembl chr17:35,316,514...35,317,736
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS
IBA
IEA
UniProt
GO_Central
TreeGrafter
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,763...127,503,257
JBrowse link
G ID3 inhibitor of DNA binding 3 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:81,422,541...81,424,169
Ensembl chr 6:81,422,546...81,424,075
JBrowse link
G ID4 inhibitor of DNA binding 4 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:15,281,535...15,284,895
Ensembl chr 7:15,281,757...15,282,839
JBrowse link
G KDM2A lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,238,690...5,357,799
Ensembl chr 2:5,240,312...5,357,829
JBrowse link
G KDM5A lysine demethylase 5A involved_in ISO (MGI:5288521|PMID:21960634) UniProt PMID:21960634 MGI:5288521 NCBI chr 5:67,628,791...67,716,143
Ensembl chr 5:67,629,380...67,715,905
JBrowse link
G KDM8 lysine demethylase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:19,653,396...19,676,207
Ensembl chr 3:19,653,402...19,676,148
JBrowse link
G KMT2A lysine methyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,743,566...45,828,559
Ensembl chr 9:45,743,397...45,824,884
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:45,258,761...45,329,282
Ensembl chr  X:45,258,829...45,329,272
JBrowse link
G MC3R melanocortin 3 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:56,868,525...56,869,605
Ensembl chr17:56,868,525...56,869,605
JBrowse link
G MTA1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107
G MYBBP1A MYB binding protein 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:50,491,042...50,506,085
Ensembl chr12:50,491,044...50,506,050
JBrowse link
G MYCBP2 MYC binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:49,163,969...49,432,865
Ensembl chr11:49,163,684...49,432,583
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase involved_in IEA
ISS
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 9:106,119,896...106,162,126
Ensembl chr 9:106,119,899...106,294,586
JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:64,888,029...65,245,757
Ensembl chr 4:64,954,238...65,246,572
JBrowse link
G NCOR1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:19037247) MGI PMID:19037247 NCBI chr12:59,256,868...59,392,564
Ensembl chr12:59,273,100...59,392,562
JBrowse link
G NGFR nerve growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:25,699,410...25,720,355
Ensembl chr12:25,699,427...25,720,356
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,420...87,909,241
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:53,298,805...53,490,375
Ensembl chr 3:53,298,811...53,490,574
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 involved_in ISO (MGI:6275703|PMID:25212631), (MGI:6282985|PMID:30555544) UniProt PMID:25212631 PMID:30555544 MGI:6275703 MGI:6282985 NCBI chr 6:84,225,670...84,228,156
Ensembl chr 6:84,225,694...84,228,481
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:179,822,731...179,916,226
Ensembl chr13:179,825,281...179,915,177
JBrowse link
G NUDT12 nudix hydrolase 12 involved_in ISO (MGI:6382639|PMID:31875550) UniProt PMID:31875550 MGI:6382639 NCBI chr 2:109,044,946...109,059,721
Ensembl chr 2:109,045,592...109,059,616
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr  X:57,521,091...57,558,467
Ensembl chr  X:57,521,098...57,558,515
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,889...53,374,248
JBrowse link
G PER2 period circadian regulator 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,422...137,837,070
JBrowse link
G PER3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G PML PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,053...59,450,105
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,302,755...3,321,091
Ensembl chr 5:3,300,741...3,364,239
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,946,992
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,119,939...5,123,617
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in ISS
IEA
IBA
UniProt
TreeGrafter
GO_Central
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,688...110,474,891
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,545...32,091,499
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (PMID:12725729) MGI PMID:12725729 NCBI chr 8:136,754,698...136,854,589
Ensembl chr 8:136,755,469...136,852,906
JBrowse link
G PRMT5 protein arginine methyltransferase 5 involved_in ISO (MGI:5464222|PMID:23133559) UniProt PMID:23133559 MGI:5464222 NCBI chr 7:76,110,956...76,119,619
Ensembl chr 7:76,110,951...76,124,989
JBrowse link
G RAI1 retinoic acid induced 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:60,751,159...60,854,710
Ensembl chr12:60,755,521...60,766,058
JBrowse link
G RBM14 RNA binding motif protein 14 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17264215) Ensembl
MGI
PMID:17264215 GO_REF:0000107 NCBI chr 2:5,776,535...5,784,337
Ensembl chr 2:5,776,539...5,784,337
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:5,745,364...5,758,177 JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:51,444,670...51,480,350
Ensembl chr 6:51,444,664...51,480,319
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,719,004...111,482,807
Ensembl chr 1:111,375,457...111,477,703
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030), (MGI:5582866|PMID:23723244) UniProt PMID:22753030 PMID:23723244 MGI:5504349 MGI:5582866 NCBI chr 4:97,374,672...97,399,017
Ensembl chr 4:97,375,136...97,400,209
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297
JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (MGI:5603468|PMID:25083875) UniProt PMID:25083875 MGI:5603468 NCBI chr 2:74,568,539...74,577,774
Ensembl chr 2:74,568,493...74,577,772
JBrowse link
G TOP1 DNA topoisomerase I involved_in ISO (PMID:22904072) UniProt PMID:22904072 NCBI chr17:43,710,270...43,799,700
Ensembl chr17:43,710,290...43,799,700
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,482...46,590,392
JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chr 6:15,693,987...15,941,301
Ensembl chr 6:15,698,199...15,863,270
JBrowse link
G ZPBP2 zona pellucida binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31560728) Ensembl
MGI
PMID:31560728 GO_REF:0000107 NCBI chr12:22,454,974...22,462,918
Ensembl chr12:22,454,186...22,462,913
JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,626
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,889...53,374,248
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012) UniProt PMID:11395012 MGI:1935010 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,422...137,837,070
JBrowse link
G RBM14 RNA binding motif protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,776,535...5,784,337
Ensembl chr 2:5,776,539...5,784,337
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chr17:37,726,084...37,744,378
Ensembl chr17:37,726,084...37,744,461
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30498428) Ensembl
MGI
PMID:30498428 GO_REF:0000107 NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,994...126,184,858
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chr 9:109,740,510...111,781,144 JBrowse link
G NLGN3 neuroligin 3 ISO RGD PMID:28958035 RGD:126790492 NCBI chr  X:57,174,506...57,204,770
Ensembl chr  X:57,176,103...57,201,461
JBrowse link
G NPAS2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chr 3:53,298,805...53,490,375
Ensembl chr 3:53,298,811...53,490,574
JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170
JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:25,830,544...25,929,640
Ensembl chr 7:25,826,298...25,929,702
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22678064) Ensembl
MGI
PMID:22678064 GO_REF:0000107 NCBI chr 7:33,723,077...34,122,673
Ensembl chr 7:33,720,014...34,124,458
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:12419540) MGI PMID:12419540 NCBI chr 1:140,566,443...140,906,516
Ensembl chr 1:140,566,540...140,905,623
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CES1 carboxylesterase 1 acts_upstream_of_or_within ISO (PMID:30862682) MGI PMID:30862682 NCBI chr 6:29,884,249...29,913,330 JBrowse link
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:159,128,039...159,187,476
Ensembl chr 1:159,128,038...159,187,481
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12451142) Ensembl
MGI
PMID:12451142 GO_REF:0000107 NCBI chr14:71,398,939...71,402,479
Ensembl chr14:71,400,980...71,401,447
JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 involved_in IMP (PMID:12196552) AgBase PMID:12196552 NCBI chr 2:8,858,765...8,872,042 JBrowse link
G CLOCK clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,793,342...54,877,777
JBrowse link
G GNA11 G protein subunit alpha 11 involved_in ISS AgBase GO_REF:0000024 NCBI chr 2:75,439,405...75,456,855
Ensembl chr 2:75,437,201...75,457,092
JBrowse link
G GNAQ G protein subunit alpha q involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:230,607,469...230,906,988
Ensembl chr 1:230,605,265...230,907,674
JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19217292) MGI PMID:19217292 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,763...127,503,257
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20080691) Ensembl
MGI
PMID:20080691 GO_REF:0000107 NCBI chr 1:158,642,810...158,863,643
Ensembl chr 1:158,642,818...158,862,106
JBrowse link
G SOX14 SRY-box transcription factor 14 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22920256) Ensembl
MGI
PMID:22920256 GO_REF:0000107 NCBI chr13:78,620,818...78,621,702
Ensembl chr13:78,620,984...78,622,577
JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 5:21,763,014...21,787,521 JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,398,939...71,402,479
Ensembl chr14:71,400,980...71,401,447
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:61,526,121...61,533,686
Ensembl chr13:61,526,116...61,533,674
JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:59,069,334...59,157,196
Ensembl chr 2:59,069,335...59,157,176
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,545...13,364,593
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,587,109...16,620,385
JBrowse link
G FBXL17 F-box and leucine rich repeat protein 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:112,989,134...113,480,564
Ensembl chr 2:112,989,145...113,480,210
JBrowse link
G FBXL21 F-box and leucine rich repeat protein 21 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:138,097,009...138,108,284 JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:49,131,663...49,151,380
Ensembl chr11:49,131,665...49,151,009
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,763...127,503,257
JBrowse link
G MTA1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107
G NR2F6 nuclear receptor subfamily 2 group F member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15741322) Ensembl
MGI
PMID:15741322 GO_REF:0000107 NCBI chr 2:60,426,116...60,438,178
Ensembl chr 2:60,426,618...60,438,177
JBrowse link
G OPN5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121
JBrowse link
G PDE6B phosphodiesterase 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:80,378...111,960
Ensembl chr 8:80,378...110,672
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,889...53,374,248
JBrowse link
G PER2 period circadian regulator 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,422...137,837,070
JBrowse link
G PER3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G PML PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,053...59,450,105
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,119,939...5,123,617
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,688...110,474,891
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,545...32,091,499
JBrowse link
G RBM14 RNA binding motif protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,776,535...5,784,337
Ensembl chr 2:5,776,539...5,784,337
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:5,745,364...5,758,177 JBrowse link
G SIK1 salt inducible kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:206,454,695...206,465,802
Ensembl chr13:206,454,718...206,465,807
JBrowse link
G TP53 tumor protein p53 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,482...46,590,392
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26131556) Ensembl
MGI
PMID:26131556 GO_REF:0000107 NCBI chr12:32,479,469...32,823,527
Ensembl chr12:32,321,340...32,821,340
JBrowse link
G CIART circadian associated repressor of transcription involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,800,849...98,809,573
Ensembl chr 4:98,800,931...98,804,739
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chr 9:109,740,510...111,781,144 JBrowse link
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,763...127,503,257
JBrowse link
G KCND2 potassium voltage-gated channel subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:26,139,457...26,624,210
Ensembl chr18:26,139,457...26,623,233
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:16845385) MGI PMID:16845385 NCBI chr14:79,345,382...80,106,337
Ensembl chr14:79,352,005...80,106,295
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr 8:132,445,818...132,751,575
Ensembl chr 8:132,298,299...132,776,820
JBrowse link
G MC3R melanocortin 3 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:56,868,525...56,869,605
Ensembl chr17:56,868,525...56,869,605
JBrowse link
G MTA1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107
G NAGLU N-acetyl-alpha-glucosaminidase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,271,351...20,279,777 JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:64,888,029...65,245,757
Ensembl chr 4:64,954,238...65,246,572
JBrowse link
G NCOR1 nuclear receptor corepressor 1 involved_in ISO (MGI:3821398|PMID:19037247) UniProt PMID:19037247 MGI:3821398 NCBI chr12:59,256,868...59,392,564
Ensembl chr12:59,273,100...59,392,562
JBrowse link
G NMS neuromedin S acts_upstream_of_or_within ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chr 3:53,747,549...53,763,396 JBrowse link
G NPAS2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chr 3:53,298,805...53,490,375
Ensembl chr 3:53,298,811...53,490,574
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) CACAO PMID:17706614 MGI:3759727 NCBI chr14:99,929,590...100,021,619 JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,482...46,590,392
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIPC CLOCK interacting pacemaker involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 7:100,180,389...100,199,529
Ensembl chr 7:100,180,970...100,197,837
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,545...13,364,593
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,587,109...16,620,385
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:4410413|PMID:19605937) UniProt PMID:19605937 MGI:4410413 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,422...137,837,070
JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,560,402...6,632,524
Ensembl chr14:6,560,565...6,632,523
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISO (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chr 6:91,391,552...91,408,236
Ensembl chr 6:91,391,555...91,408,219
JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:58,171,821...58,246,126
Ensembl chr 7:58,176,167...58,245,971
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,497...47,072,245
JBrowse link
G ADORA1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chr 9:113,835,279...113,875,899
Ensembl chr 9:113,835,921...113,872,365
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:66,442,106...66,453,576
Ensembl chr13:66,445,992...66,452,917
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr 9:113,835,279...113,875,899
Ensembl chr 9:113,835,921...113,872,365
JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chr16:49,189,555...49,193,722
Ensembl chr16:49,189,602...49,191,976
JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:141,958,955...142,160,437
Ensembl chr 6:141,958,955...142,161,286
JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEPR leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chr 6:146,802,297...146,896,152
Ensembl chr 6:146,801,954...146,895,995
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARNTL aryl hydrocarbon receptor nuclear translocator like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:45,895,637...46,025,174
Ensembl chr 2:45,895,289...45,988,570
JBrowse link
G ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:46,289,873...46,482,369
Ensembl chr 5:46,290,001...46,482,461
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:112,398,764...112,588,041
Ensembl chr14:112,398,868...112,588,037
JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,793,342...54,877,777
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:52,212,401...52,337,893
Ensembl chr16:52,212,607...52,337,913
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:6,560,544...6,572,461
Ensembl chr 2:6,560,513...6,572,466
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chr 9:25,556,756...25,557,792
Ensembl chr 9:25,545,390...25,558,054
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chr14:97,558,531...98,793,080
Ensembl chr14:97,558,533...98,793,010
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,719,004...111,482,807
Ensembl chr 1:111,375,457...111,477,703
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chr 4:97,374,672...97,399,017
Ensembl chr 4:97,375,136...97,400,209
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:92,350,021...92,412,335
Ensembl chr 6:92,355,667...92,412,330
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr 8:69,643,427...69,663,152
Ensembl chr 8:69,531,487...69,721,696
JBrowse link
G CASP1 caspase 1, apoptosis-related cysteine peptidase ISO RGD PMID:16455762 RGD:2315921 NCBI chr 9:35,188,066...35,199,364
Ensembl chr 9:35,186,420...35,200,328
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr17:40,386,725...40,398,312
Ensembl chr17:40,387,344...40,397,857
JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr18:42,030,505...42,046,178
Ensembl chr18:42,030,510...42,046,184
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:66,442,106...66,453,576
Ensembl chr13:66,445,992...66,452,917
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chr 9:25,556,756...25,557,792
Ensembl chr 9:25,545,390...25,558,054
JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr 8:74,039,959...74,048,398
Ensembl chr 8:74,039,616...74,047,817
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:141,958,955...142,160,437
Ensembl chr 6:141,958,955...142,161,286
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr16:25,670,832...25,686,556
Ensembl chr16:25,670,862...25,686,552
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr17:40,386,725...40,398,312
Ensembl chr17:40,387,344...40,397,857
JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr 5:82,018,915...82,020,267
Ensembl chr 5:82,018,915...82,020,266
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 6:68,552,889...68,560,827
Ensembl chr 6:68,552,887...68,559,674
JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr12:695,765...700,678 JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr14:49,467,186...49,485,845
Ensembl chr14:49,468,877...49,485,850
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,035,854...112,725,618
JBrowse link
G NPS neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chr14:136,835,630...136,839,511
Ensembl chr14:136,836,352...136,839,510
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 6:68,552,889...68,560,827
Ensembl chr 6:68,552,887...68,559,674
JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr12:695,765...700,678 JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,043,572...50,143,549
Ensembl chr18:50,051,364...50,143,628
JBrowse link
G ATG7 autophagy related 7 involved_in ISO (MGI:6208175|PMID:29937374) UniProt PMID:29937374 MGI:6208175 NCBI chr13:67,301,756...67,699,141
Ensembl chr13:67,417,938...67,707,654
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:61,526,121...61,533,686
Ensembl chr13:61,526,116...61,533,674
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:112,398,764...112,588,041
Ensembl chr14:112,398,868...112,588,037
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,860,052...6,874,334
Ensembl chr14:6,859,664...6,874,327
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:64,233,945...64,255,290
Ensembl chr14:64,233,987...64,372,197
JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,793,342...54,877,777
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,545...13,364,593
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,587,109...16,620,385
JBrowse link
G CSNK1D casein kinase 1 delta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:768,856...794,495
Ensembl chr12:768,865...796,595
JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,594,461...9,620,483
Ensembl chr 5:9,594,934...9,620,476
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,171,554...10,201,602
Ensembl chr 2:10,171,502...10,201,598
JBrowse link
G DRD4 dopamine receptor D4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:398,766...401,539
Ensembl chr 2:398,766...402,433
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:109,384,976...109,450,943
Ensembl chr 9:109,385,015...109,450,941
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:49,131,663...49,151,380
Ensembl chr11:49,131,665...49,151,009
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:76,482,027...76,699,354
Ensembl chr 8:76,482,844...76,699,348
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (MGI:6294161|PMID:28556462) UniProt PMID:28556462 MGI:6294161 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,569
JBrowse link
G HDAC3 histone deacetylase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:143,273,188...143,287,421
Ensembl chr 2:143,273,192...143,287,399
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:46,783,772...46,847,505
Ensembl chr17:46,783,777...46,847,500
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,626
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,763...127,503,257
JBrowse link
G KDM2A lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,238,690...5,357,799
Ensembl chr 2:5,240,312...5,357,829
JBrowse link
G KLF10 KLF transcription factor 10 involved_in ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr 4:34,430,132...34,435,990
Ensembl chr 4:34,429,941...34,436,004
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISO (MGI:5508569|PMID:20300063) UniProt PMID:20300063 MGI:5508569 NCBI chr  X:45,258,761...45,329,282
Ensembl chr  X:45,258,829...45,329,272
JBrowse link
G MAGEL2 MAGE family member L2 involved_in ISO (MGI:5607219|PMID:22208286) UniProt PMID:22208286 MGI:5607219 NCBI chr 1:142,450,414...142,454,633
Ensembl chr 1:142,448,689...142,454,697
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr 8:132,445,818...132,751,575
Ensembl chr 8:132,298,299...132,776,820
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr14:88,988,914...89,108,875
Ensembl chr14:88,988,949...89,108,874
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,338,466...78,399,108
Ensembl chr 2:78,338,376...78,399,100
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,420...87,909,241
JBrowse link
G NONO non-POU domain containing octamer binding involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:57,278,915...57,316,224 JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chr 3:53,298,805...53,490,375
Ensembl chr 3:53,298,811...53,490,574
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:10,756,954...10,791,219
Ensembl chr13:10,756,926...10,791,210
JBrowse link
G OPN4 opsin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,647,238...87,658,815
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,889...53,374,248
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012), (MGI:4410390|PMID:19917250) UniProt PMID:11395012 PMID:19917250 MGI:1935010 MGI:4410390 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,422...137,837,070
JBrowse link
G PML PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,053...59,450,105
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,302,755...3,321,091
Ensembl chr 5:3,300,741...3,364,239
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISS UniProt GO_REF:0000024 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,946,992
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,119,939...5,123,617
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in ISS
IEA
IBA
UniProt
TreeGrafter
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,688...110,474,891
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,545...32,091,499
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,324...25,783,707
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:155,683,392...155,754,283
Ensembl chr 6:155,681,784...155,754,278
JBrowse link
G PRKCG protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:56,213,479...56,235,683
Ensembl chr 6:56,213,480...56,234,210
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:79,687,375...79,850,146
Ensembl chr 4:79,687,375...79,846,656
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982
JBrowse link
G PSPC1 paraspeckle component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:477,010...572,090
Ensembl chr11:482,564...572,090
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IMP (PMID:23172836) UniProt PMID:23172836 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,352,920...125,493,362
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,719,004...111,482,807
Ensembl chr 1:111,375,457...111,477,703
JBrowse link
G RORB RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:227,573,972...227,776,806
Ensembl chr 1:227,574,648...227,772,671
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chr 6:91,391,552...91,408,236
Ensembl chr 6:91,391,555...91,408,219
JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:90,951,798...90,971,538
Ensembl chr13:90,949,021...90,971,411
JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (MGI:6443593|PMID:30782483) UniProt PMID:30782483 MGI:6443593 NCBI chr 2:74,568,539...74,577,774
Ensembl chr 2:74,568,493...74,577,772
JBrowse link
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:81,849,908...81,926,764
Ensembl chr13:81,867,740...81,926,762
JBrowse link
G SRRD SRR1 domain containing involved_in ISO (MGI:6282940|PMID:28802827) UniProt PMID:28802827 MGI:6282940 NCBI chr14:44,073,562...44,097,998
Ensembl chr14:44,073,638...44,096,954
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,860...71,227,704
JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 5:21,763,014...21,787,521 JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:22,001,300...22,028,452
Ensembl chr12:22,001,282...22,028,450
JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:141,887,179...142,001,595
Ensembl chr 1:141,887,227...141,995,003
JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:33,754,357...33,810,480
Ensembl chr 3:33,775,829...33,810,465
JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:36,736,049...36,888,702
Ensembl chr  X:36,760,865...36,885,250
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chr 4:95,196,992...95,211,084
Ensembl chr 4:95,198,717...95,211,037
JBrowse link
G IL6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263
JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:109,534,923...109,570,172
Ensembl chr 4:109,557,973...109,560,998
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO (MGI:6874638|PMID:34798058) UniProt PMID:34798058 MGI:6874638 NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chr 4:95,196,992...95,211,084
Ensembl chr 4:95,198,717...95,211,037
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,497...47,072,245
JBrowse link
G ADRB1 adrenoceptor beta 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr14:124,400,330...124,401,739
Ensembl chr14:124,400,330...124,401,739
JBrowse link
G CORT cortistatin ISO RGD PMID:8622767 RGD:727760 NCBI chr 6:70,716,630...70,717,980
Ensembl chr 6:70,716,386...70,718,032
JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chr 2:134,354,724...134,357,155
Ensembl chr 2:134,354,724...134,357,155
JBrowse link
G DRD3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chr13:145,769,294...145,817,997
Ensembl chr13:145,771,774...145,819,168
JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:118,839,314...118,899,804
Ensembl chr13:118,839,338...118,900,136
JBrowse link
G NMU neuromedin U involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr 8:54,952,333...54,978,577
Ensembl chr 8:54,952,339...54,978,551
JBrowse link
G PER3 period circadian regulator 3 involved_in ISO (PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630)
(MGI:5300112|PMID:21957163)
UniProt PMID:17346965 PMID:19716732 PMID:21957163 PMID:24439663 PMID:24577121 More... MGI:5300112 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr 6:52,318,544...52,322,504
Ensembl chr 6:52,318,531...52,322,638
JBrowse link
G PTGDS prostaglandin D2 synthase involved_in ISS UniProt GO_REF:0000024
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:25,830,544...25,929,640
Ensembl chr 7:25,826,298...25,929,702
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:141,958,955...142,160,437
Ensembl chr 6:141,958,955...142,161,286
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr16:25,670,832...25,686,556
Ensembl chr16:25,670,862...25,686,552
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G OPRL1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chr17:62,905,700...62,913,018
Ensembl chr17:62,905,082...62,913,754
JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chr 6:15,693,987...15,941,301
Ensembl chr 6:15,698,199...15,863,270
JBrowse link

Term paths to the root